A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
| A3 | Accurate, Adaptable, and Accessible Error Metrics for Predictive Models |
| AalenJohansen | Conditional Aalen-Johansen Estimation |
| AATtools | Reliability and Scoring Routines for the Approach-Avoidance Task |
| ABACUS | Apps Based Activities for Communicating and Understanding Statistics |
| abasequence | Coding 'ABA' Patterns for Sequence Data |
| abbreviate | Readable String Abbreviation |
| abc | Tools for Approximate Bayesian Computation (ABC) |
| abc.data | Data Only: Tools for Approximate Bayesian Computation (ABC) |
| ABC.RAP | Array Based CpG Region Analysis Pipeline |
| ABCanalysis | Computed ABC Analysis |
| abclass | Angle-Based Large-Margin Classifiers |
| ABCoptim | Implementation of Artificial Bee Colony (ABC) Optimization |
| ABCp2 | Approximate Bayesian Computational Model for Estimating P2 |
| abcrf | Approximate Bayesian Computation via Random Forests |
| abcrlda | Asymptotically Bias-Corrected Regularized Linear Discriminant Analysis |
| abctools | Tools for ABC Analyses |
| abd | The Analysis of Biological Data |
| abdiv | Alpha and Beta Diversity Measures |
| abe | Augmented Backward Elimination |
| aberrance | Detect Aberrant Behavior in Test Data |
| abess | Fast Best Subset Selection |
| abglasso | Adaptive Bayesian Graphical Lasso |
| ABHgenotypeR | Easy Visualization of ABH Genotypes |
| abima | Adaptive Bootstrap Inference for Mediation Analysis with Enhanced Statistical Power |
| abind | Combine Multidimensional Arrays |
| abjData | Databases Used Routinely by the Brazilian Jurimetrics Association |
| abjutils | Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association |
| ablasso | Arellano-Bond LASSO Estimator for Dynamic Linear Panel Models |
| ABM | Agent Based Model Simulation Framework |
| abmR | Agent-Based Models in R |
| abn | Modelling Multivariate Data with Additive Bayesian Networks |
| abnormality | Measure a Subject's Abnormality with Respect to a Reference Population |
| abodOutlier | Angle-Based Outlier Detection |
| ABPS | The Abnormal Blood Profile Score to Detect Blood Doping |
| ABRSQOL | Quality-of-Life Solver for "Measuring Quality of Life under Spatial Frictions" |
| abseil | 'C++' Header Files from 'Abseil' |
| absorber | Variable Selection in Nonparametric Models using B-Splines |
| abstr | R Interface to the A/B Street Transport System Simulation Software |
| abstractr | An R-Shiny Application for Creating Visual Abstracts |
| ABSurvTDC | Survival Analysis using Time Dependent Covariate for Animal Breeding |
| abtest | Bayesian A/B Testing |
| abundant | High-Dimensional Principal Fitted Components and Abundant Regression |
| Ac3net | Inferring Directional Conservative Causal Core Gene Networks |
| ACA | Abrupt Change-Point or Aberration Detection in Point Series |
| AcademicThemes | Colour Plots with Palettes from Academic Institutions |
| academictwitteR | Access the Twitter Academic Research Product Track V2 API Endpoint |
| acc | Exploring Accelerometer Data |
| acca | A Canonical Correlation Analysis with Inferential Guaranties |
| accelerometry | Functions for Processing Accelerometer Data |
| accelmissing | Missing Value Imputation for Accelerometer Data |
| AccelStab | Accelerated Stability Kinetic Modelling |
| accept | The Acute COPD Exacerbation Prediction Tool (ACCEPT) |
| AcceptanceSampling | Creation and Evaluation of Acceptance Sampling Plans |
| AcceptReject | Acceptance-Rejection Method for Generating Pseudo-Random Observations |
| accessibility | Transport Accessibility Measures |
| accessr | Command Line Tools to Produce Accessible Documents using 'R Markdown' |
| accessrmd | Improving the Accessibility of 'rmarkdown' Documents |
| accrual | Bayesian Accrual Prediction |
| accrualPlot | Accrual Plots and Predictions for Clinical Trials |
| accSDA | Accelerated Sparse Discriminant Analysis |
| accucor | Natural Abundance Correction of Mass Spectrometer Data |
| accumulate | Split-Apply-Combine with Dynamic Groups |
| acdcquery | Query the Attentional Control Data Collection |
| acdcR | Agro-Climatic Data by County |
| ACDm | Tools for Autoregressive Conditional Duration Models |
| ACE.CoCo | Analysis of Correlated High-Dimensional Expression (ACE) Data |
| ace2fastq | ACE File to FASTQ Converter |
| acebayes | Optimal Bayesian Experimental Design using the ACE Algorithm |
| aceEditor | The 'Ace' Editor as a HTML Widget |
| ACEP | Analisis Computacional de Eventos de Protesta |
| acepack | ACE and AVAS for Selecting Multiple Regression Transformations |
| ACEsearch | 'ACE' Search Engine API |
| ACEsimFit | ACE Kin Pair Data Simulations and Model Fitting |
| ACEt | Estimating Dynamic Heritability and Twin Model Comparison |
| acfMPeriod | Robust Estimation of the ACF from the M-Periodogram |
| Achilles | Achilles Data Source Characterization |
| acid | Analysing Conditional Income Distributions |
| acled.api | Automated Retrieval of ACLED Conflict Event Data |
| ACNE | Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization |
| acnr | Annotated Copy-Number Regions |
| acopula | Modelling Dependence with Multivariate Archimax (or any User-Defined Continuous) Copulas |
| acoRn | Exclusion-Based Parentage Assignment Using Multilocus Genotype Data |
| AcousticNDLCodeR | Coding Sound Files for Use with NDL |
| acp | Autoregressive Conditional Poisson |
| acro | A Tool for Automating the Statistical Disclosure Control of Research Outputs |
| acroname | Engine for Acronyms and Initialisms |
| AcrossTic | A Cost-Minimal Regular Spanning Subgraph with TreeClust |
| acs | Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census |
| acss | Algorithmic Complexity for Short Strings |
| acss.data | Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method) |
| ACSSpack | ACSS, Corresponding ACSS, and GLP Algorithm |
| ACSWR | A Companion Package for the Book "A Course in Statistics with R" |
| act | Aligned Corpus Toolkit |
| ACTCD | Asymptotic Classification Theory for Cognitive Diagnosis |
| ActCR | Extract Circadian Rhythms Metrics from Actigraphy Data |
| actel | Acoustic Telemetry Data Analysis |
| ActFrag | Activity Fragmentation Metrics Extracted from Minute Level Activity Data |
| actilifecounts | Generate Activity Counts from Raw Accelerometer Data |
| ActiSleep | Sleep Duration Estimate Algorithm |
| activAnalyzer | A 'Shiny' App to Analyze Accelerometer-Measured Daily Physical Behavior Data |
| activatr | Utilities for Parsing and Plotting Activities |
| ActiveDriver | Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites |
| activegp | Gaussian Process Based Design and Analysis for the Active Subspace Method |
| ActivePathways | Integrative Pathway Enrichment Analysis of Multivariate Omics Data |
| activity | Animal Activity Statistics |
| ActivityIndex | Activity Index Calculation using Raw 'Accelerometry' Data |
| activPAL | Advanced Processing and Chart Generation from activPAL Events Files |
| actLifer | Creating Actuarial Life Tables |
| actogrammr | Read in Activity Data and Plot Actograms |
| actuar | Actuarial Functions and Heavy Tailed Distributions |
| actuaRE | Handling Hierarchically Structured Risk Factors using Random Effects Models |
| ActuarialM | Computation of Actuarial Measures Using Bell G Family |
| actuaryr | Develop Actuarial Models |
| actxps | Create Actuarial Experience Studies: Prepare Data, Summarize Results, and Create Reports |
| AcuityView | A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity |
| acumos | 'Acumos' R Interface |
| ACV | Optimal Out-of-Sample Forecast Evaluation and Testing under Stationarity |
| ACWR | Acute Chronic Workload Ratio Calculation |
| ada | The R Package Ada for Stochastic Boosting |
| adabag | Applies Multiclass AdaBoost.M1, SAMME and Bagging |
| adace | Estimator of the Adherer Average Causal Effect |
| adagio | Discrete and Global Optimization Routines |
| adaHuber | Adaptive Huber Estimation and Regression |
| adamethods | Archetypoid Algorithms and Anomaly Detection |
| adana | Adaptive Nature-Inspired Algorithms for Hybrid Genetic Optimization |
| AdapSamp | Adaptive Sampling Algorithms |
| adapt4pv | Adaptive Approaches for Signal Detection in Pharmacovigilance |
| adaptalint | Check Code Style Painlessly |
| adaptDiag | Bayesian Adaptive Designs for Diagnostic Trials |
| AdaptGauss | Gaussian Mixture Models (GMM) |
| adaptiveGPCA | Adaptive Generalized PCA |
| adaptivetau | Tau-Leaping Stochastic Simulation |
| adaptIVPT | Adaptive Bioequivalence Design for In-Vitro Permeation Tests |
| adaptMCMC | Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler |
| adaptMT | Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information |
| adaptr | Adaptive Trial Simulator |
| ADAPTS | Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells |
| adaptsmoFMRI | Adaptive Smoothing of FMRI Data |
| adaptTest | Adaptive Two-Stage Tests |
| adaR | A Fast 'WHATWG' Compliant URL Parser |
| AdaSampling | Adaptive Sampling for Positive Unlabeled and Label Noise Learning |
| adass | Adaptive Smoothing Spline (AdaSS) Estimator for the Function-on-Function Linear Regression |
| adbcdrivermanager | 'Arrow' Database Connectivity ('ADBC') Driver Manager |
| adbcpostgresql | 'Arrow' Database Connectivity ('ADBC') 'PostgreSQL' Driver |
| adbcsqlite | 'Arrow' Database Connectivity ('ADBC') 'SQLite' Driver |
| adbi | 'DBI' Compliant Database Access Using 'ADBC' |
| adc | Calculate Antecedent Discharge Conditions |
| ADCT | Adaptive Design in Clinical Trials |
| add2ggplot | Add to 'ggplot2' |
| addhaz | Binomial and Multinomial Additive Hazard Models |
| addhazard | Fit Additive Hazards Models for Survival Analysis |
| addinsJoaoMelo | Addins Made of Joao Melo |
| addinslist | Discover and Install Useful RStudio Addins |
| addinsOutline | 'RStudio' Addins for Show Outline of a R Markdown/'LaTeX' Project |
| additive | Bindings for Additive TidyModels |
| additiveDEA | Additive Data Envelopment Analysis Models |
| additivityTests | Additivity Tests in the Two Way Anova with Single Sub-Class Numbers |
| addreg | Additive Regression for Discrete Data |
| addScales | Adds Labeled Center Line and Scale Lines/Regions to Trellis Plots |
| ADDT | Analysis of Accelerated Destructive Degradation Test Data |
| ade4 | Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences |
| ade4TkGUI | 'ade4' Tcl/Tk Graphical User Interface |
| adea | Alternate DEA Package |
| adegenet | Exploratory Analysis of Genetic and Genomic Data |
| adegraphics | An S4 Lattice-Based Package for the Representation of Multivariate Data |
| adehabitatHR | Home Range Estimation |
| adehabitatHS | Analysis of Habitat Selection by Animals |
| adehabitatLT | Analysis of Animal Movements |
| adehabitatMA | Tools to Deal with Raster Maps |
| adelie | Group Lasso and Elastic Net Solver for Generalized Linear Models |
| adephylo | Exploratory Analyses for the Phylogenetic Comparative Method |
| adepro | A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles |
| adept | Adaptive Empirical Pattern Transformation |
| adeptdata | Accelerometry Data Sets |
| AdequacyModel | Adequacy of Probabilistic Models and General Purpose Optimization |
| ADER | Data Analysis in Ecology |
| adespatial | Multivariate Multiscale Spatial Analysis |
| adestr | Estimation in Optimal Adaptive Two-Stage Designs |
| adfExplorer | Import from and Export to Amiga Disk Files |
| adformR | Get Adform Ads Data via the 'Windsor.ai' API |
| ADGofTest | Anderson-Darling GoF test |
| adheRenceRX | Assess Medication Adherence from Pharmaceutical Claims Data |
| AdhereR | Adherence to Medications |
| AdhereRViz | Adherence to Medications |
| adimpro | Adaptive Smoothing of Digital Images |
| AdIsMF | Adsorption Isotherm Model Fitting |
| adiv | Analysis of Diversity |
| adjclust | Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix |
| adjROC | Computing Sensitivity at a Fix Value of Specificity and Vice Versa as Well as Bootstrap Metrics for ROC Curves |
| adjSURVCI | Parameter and Adjusted Probability Estimation for Right-Censored Data |
| adjustedcranlogs | Remove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs |
| adjustedCurves | Confounder-Adjusted Survival Curves and Cumulative Incidence Functions |
| adklakedata | Adirondack Long-Term Lake Data |
| adlift | An Adaptive Lifting Scheme Algorithm |
| ADLP | Accident and Development Period Adjusted Linear Pools for Actuarial Stochastic Reserving |
| admiral | ADaM in R Asset Library |
| admiral.test | Test Data for the 'admiral' Package |
| admiraldev | Utility Functions and Development Tools for the Admiral Package Family |
| admiralonco | Oncology Extension Package for ADaM in 'R' Asset Library |
| admiralophtha | ADaM in R Asset Library - Ophthalmology |
| admiralpeds | Pediatrics Extension Package for ADaM in 'R' Asset Library |
| admiralvaccine | Vaccine Extension Package for ADaM in 'R' Asset Library |
| admisc | Adrian Dusa's Miscellaneous |
| AdMit | Adaptive Mixture of Student-t Distributions |
| admix | Package Admix for Admixture (aka Contamination) Models |
| admixr | An Interface for Running 'ADMIXTOOLS' Analyses |
| ADMM | Algorithms using Alternating Direction Method of Multipliers |
| admmDensestSubmatrix | Alternating Direction Method of Multipliers to Solve Dense Dubmatrix Problem |
| ADMMsigma | Penalized Precision Matrix Estimation via ADMM |
| admtools | Estimate and Manipulate Age-Depth Models |
| ADMUR | Ancient Demographic Modelling Using Radiocarbon |
| adnuts | No-U-Turn MCMC Sampling for 'ADMB' Models |
| adobeanalyticsr | R Client for 'Adobe Analytics' API 2.0 |
| adoptr | Adaptive Optimal Two-Stage Designs |
| ADP | Adoption Probability, Triers and Users Rate of a New Product |
| ADPclust | Fast Clustering Using Adaptive Density Peak Detection |
| ADPF | Use Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay |
| adproclus | Additive Profile Clustering Algorithms |
| adpss | Design and Analysis of Locally or Globally Efficient Adaptive Designs |
| ads | Spatial Point Patterns Analysis |
| adsDataHubR | Google Ads Data Hub API Client |
| ADTSA | Time Series Analysis |
| AdvancedBasketballStats | Advanced Basketball Statistics |
| AdvBinomApps | Upper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information |
| AdvDif4 | Solving 1D Advection Bi-Flux Diffusion Equation |
| adventr | Interactive R Tutorials to Accompany Field (2016), "An Adventure in Statistics" |
| AdverseEvents | 'shiny' Application for Adverse Event Analysis of 'OnCore' Data |
| ADVICE | Automatic Direct Variable Selection via Interrupted Coefficient Estimation |
| adw | Angular Distance Weighting Interpolation |
| adwave | Wavelet Analysis of Genomic Data from Admixed Populations |
| adwordsR | Access the 'Google Adwords' API |
| aebdata | Access Data from the Atlas do Estado Brasileiro |
| aeddo | Automated and Early Detection of Disease Outbreaks |
| AEDForecasting | Change Point Analysis in ARIMA Forecasting |
| aedseo | Automated and Early Detection of Seasonal Epidemic Onset |
| AEenrich | Adverse Event Enrichment Tests |
| aelab | Calculation of Greenhouse Gas Flux |
| AEP | Statistical Modelling for Asymmetric Exponential Power Distribution |
| AER | Applied Econometrics with R |
| AeRobiology | A Computational Tool for Aerobiological Data |
| AeroSampleR | Estimate Aerosol Particle Collection Through Sample Lines |
| AF | Model-Based Estimation of Confounder-Adjusted Attributable Fractions |
| afc | Generalized Discrimination Score |
| afcharts | Produce Charts Following UK Government Analysis Function Guidance |
| afcolours | Government Analysis Function Recommended Accessible Colour Palette |
| afdx | Diagnosis Performance Using Attributable Fraction |
| afex | Analysis of Factorial Experiments |
| AFFECT | Accelerated Functional Failure Time Model with Error-Contaminated Survival Times |
| affiner | A Finer Way to Render 3D Illustrated Objects in 'grid' Using Affine Transformations |
| affinity | Raster Georeferencing, Grid Affine Transforms, Cell Abstraction |
| affinitymatrix | Estimation of Affinity Matrix |
| affluenceIndex | Affluence (Richness) Indices |
| AFheritability | The Attributable Fraction (AF) Described as a Function of Disease Heritability, Prevalence and Intervention Specific Factors |
| AFM | Atomic Force Microscope Image Analysis |
| afmToolkit | Functions for Atomic Force Microscope Force-Distance Curves Analysis |
| afpt | Tools for Modelling of Animal Flight Performance |
| AFR | Toolkit for Regression Analysis of Kazakhstan Banking Sector Data |
| africamonitor | Africa Macroeconomic Monitor Database API |
| aftgee | Accelerated Failure Time Model with Generalized Estimating Equations |
| afthd | Accelerated Failure Time for High Dimensional Data with MCMC |
| aftR2 | R-Squared Measure under Accelerated Failure Time (AFT) Models |
| aftsem | Semiparametric Accelerated Failure Time Model |
| afttest | Model Diagnostics for Accelerated Failure Time Models |
| ag5Tools | Toolbox for Downloading and Extracting Copernicus AgERA5 Data |
| agcounts | Calculate 'ActiGraph' Counts from Accelerometer Data |
| AGD | Analysis of Growth Data |
| ageg | Age Grouping Functions |
| agena.ai | R Wrapper for 'agena.ai' API |
| ageutils | Collection of Functions for Working with Age Intervals |
| agfh | Agnostic Fay-Herriot Model for Small Area Statistics |
| agghoo | Aggregated Hold-Out Cross Validation |
| AggregateR | Aggregate Numeric, Date and Categorical Variables |
| aggregation | p-Value Aggregation Methods |
| aggTrees | Aggregation Trees |
| aggutils | Utilities for Aggregating Probabilistic Forecasts |
| AGHmatrix | Relationship Matrices for Diploid and Autopolyploid Species |
| aghq | Adaptive Gauss Hermite Quadrature for Bayesian Inference |
| aglm | Accurate Generalized Linear Model |
| agop | Aggregation Operators and Preordered Sets |
| AGPRIS | AGricultural PRoductivity in Space |
| agRee | Various Methods for Measuring Agreement |
| AgreementInterval | Agreement Interval of Two Measurement Methods |
| agricolae | Statistical Procedures for Agricultural Research |
| agricolaeplotr | Visualization of Design of Experiments from the 'agricolae' Package |
| agridat | Agricultural Datasets |
| agrifeature | Agriculture Image Feature |
| agriTutorial | Tutorial Analysis of Some Agricultural Experiments |
| agriutilities | Utilities for Data Analysis in Agriculture |
| agriwater | Evapotranspiration and Energy Fluxes Spatial Analysis |
| agrmt | Calculate Concentration and Dispersion in Ordered Rating Scales |
| AgroR | Experimental Statistics and Graphics for Agricultural Sciences |
| AgroReg | Regression Analysis Linear and Nonlinear for Agriculture |
| agrostab | Stability Analysis for Agricultural Research |
| AgroTech | Data Analysis of Pesticide Application Technology |
| ags | Crosswalk Municipality and District Statistics in Germany |
| agtboost | Adaptive and Automatic Gradient Boosting Computations |
| agua | 'tidymodels' Integration with 'h2o' |
| agvgd | An R Implementation of the 'Align-GVGD' Method |
| ahaz | Regularization for Semiparametric Additive Hazards Regression |
| AHM | Additive Heredity Model: Method for the Mixture-of-Mixtures Experiments |
| AHMbook | Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology' Vols 1 and 2 |
| ahMLE | Methods for the Additive Hazard Model |
| ahnr | An Implementation of the Artificial Hydrocarbon Networks |
| AhoCorasickTrie | Fast Searching for Multiple Keywords in Multiple Texts |
| AHPGaussian | New Multicriteria Method: AHPGaussian |
| AHPhybrid | AHP Hybrid Method |
| ahpsurvey | Analytic Hierarchy Process for Survey Data |
| AHPtools | Consistency in the Analytic Hierarchy Process |
| ahptopsis2n | Hybrid Method for Multiple Criteria Decision-Making (MCDM) |
| AHPWR | Compute Analytic Hierarchy Process |
| AHSurv | Flexible Parametric Accelerated Hazards Models |
| ahw | Calculates Continuous Time Likelihood Ratio Weights Assuming Multiplicative Intensity Models and Additive Hazard Models |
| ai | Build, Predict and Analyse Artificial Intelligence Models |
| aIc | Testing for Compositional Pathologies in Datasets |
| AICcmodavg | Model Selection and Multimodel Inference Based on (Q)AIC(c) |
| AICcPermanova | Model Selection of PERMANOVA Models Using AICc |
| AID | Box-Cox Power Transformation |
| aidar | Tools for Reading AIDA Files |
| aides | Additive Information & Details of Evidence Synthesis |
| aifeducation | Artificial Intelligence for Education |
| AIFFtools | Read AIFF Files and Convert to WAVE Format |
| aihuman | Experimental Evaluation of Algorithm-Assisted Human Decision-Making |
| aimPlot | Create Pie Like Plot for Completeness |
| aimsir17 | Irish Weather Observing Stations Hourly Records for 2017 |
| aion | Archaeological Time Series |
| AIPW | Augmented Inverse Probability Weighting |
| air | AI Assistant to Write and Understand R Code |
| aire.zmvm | Download Mexico City Pollution, Wind, and Temperature Data |
| AirExposure | Exposure Model to Air Pollutants Based on Mobility and Daily Activities |
| airGR | Suite of GR Hydrological Models for Precipitation-Runoff Modelling |
| airGRdatasets | Hydro-Meteorological Catchments Datasets for the 'airGR' Packages |
| airGRdatassim | Ensemble-Based Data Assimilation with GR Hydrological Models |
| airGRiwrm | 'airGR' Integrated Water Resource Management |
| airGRteaching | Teaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included) |
| aiRly | R Wrapper for 'Airly' API |
| AirMonitor | Air Quality Data Analysis |
| airnow | Retrieve 'AirNow' Air Quality Observations and Forecasts |
| airportr | Convenience Tools for Working with Airport Data |
| airports | Data on Airports |
| airqualityES | Air Quality Measurements in Spain from 2011 to 2018 |
| airr | AIRR Data Representation Reference Library |
| airt | Evaluation of Algorithm Collections Using Item Response Theory |
| aiRthermo | Atmospheric Thermodynamics and Visualization |
| AIscreenR | AI Screening Tools in R for Systematic Reviewing |
| aisoph | Additive Isotonic Proportional Hazards Model |
| AIUQ | Ab Initio Uncertainty Quantification |
| ajv | Another JSON Schema Validator |
| aka | Define Aliases for R Expressions |
| akc | Automatic Knowledge Classification |
| Ake | Associated Kernel Estimations |
| akiFlagger | Flags Acute Kidney Injury (AKI) |
| akima | Interpolation of Irregularly and Regularly Spaced Data |
| akmbiclust | Alternating K-Means Biclustering |
| alabama | Constrained Nonlinear Optimization |
| alakazam | Immunoglobulin Clonal Lineage and Diversity Analysis |
| alarmdata | Download, Merge, and Process Redistricting Data |
| ALassoSurvIC | Adaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data |
| albatross | PARAFAC Analysis of Fluorescence Excitation-Emission Matrices |
| aLBI | Estimating Length-Based Indicators for Fish Stock |
| albopictus | Age-Structured Population Dynamics Model |
| alcyon | Spatial Network Analysis |
| ald | The Asymmetric Laplace Distribution |
| ALDqr | Quantile Regression Using Asymmetric Laplace Distribution |
| aldvmm | Adjusted Limited Dependent Variable Mixture Models |
| ale | Interpretable Machine Learning and Statistical Inference with Accumulated Local Effects (ALE) |
| ALEPlot | Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots |
| ALFAM2 | Dynamic Model of Ammonia Emission from Field-Applied Manure |
| aLFQ | Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data |
| alfr | Connectivity to 'Alfresco' Content Management Repositories |
| alfred | Downloading Time Series from ALFRED Database for Various Vintages |
| AlgDesign | Algorithmic Experimental Design |
| AlgebraicHaploPackage | Haplotype Two Snips Out of a Paired Group of Patients |
| algo | Implement an Address Search Auto Completion Menu on 'Shiny' Text Inputs Using the 'Algolia Places' 'Javascript' Library |
| algorithmia | Allows you to Easily Interact with the Algorithmia Platform |
| aliases2entrez | Converts Human gene symbols to entrez IDs |
| alien | Estimate Invasive and Alien Species (IAS) Introduction Rates |
| align | A Modified DTW Algorithm for Stratigraphic Time Series Alignment |
| AlignLV | Multiple Group Item Response Theory Alignment Helpers for 'lavaan' and 'mirt' |
| alkahest | Pre-Processing XY Data from Experimental Methods |
| allcontributors | Acknowledge all Contributors to a Project |
| alleHap | Allele Imputation and Haplotype Reconstruction from Pedigree Databases |
| allelematch | Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present |
| AlleleRetain | Allele Retention, Inbreeding, and Demography |
| AlleleShift | Predict and Visualize Population-Level Changes in Allele Frequencies in Response to Climate Change |
| AllelicSeries | Allelic Series Test |
| allestimates | Effect Estimates from All Models |
| AllMetrics | Calculating Multiple Performance Metrics of a Prediction Model |
| allMT | Acute Lymphoblastic Leukemia Maintenance Therapy Analysis |
| allofus | Interface for 'All of Us' Researcher Workbench |
| allomr | Removing Allometric Effects of Body Size in Morphological Analysis |
| Allspice | RNA-Seq Profile Classifier |
| ALLSPICER | ALLelic Spectrum of Pleiotropy Informed Correlated Effects |
| alluvial | Alluvial Diagrams |
| almanac | Tools for Working with Recurrence Rules |
| alone | Datasets from the Survival TV Series Alone |
| alookr | Model Classifier for Binary Classification |
| aloom | All Leave-One-Out Models |
| alpaca | Fit GLM's with High-Dimensional k-Way Fixed Effects |
| alpha.correction.bh | Benjamini-Hochberg Alpha Correction |
| alphabetr | Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells |
| alphaci | Confidence Intervals for Coefficient Alpha and Standardized Alpha |
| alphahull | Generalization of the Convex Hull of a Sample of Points in the Plane |
| alphaN | Set Alpha Based on Sample Size Using Bayes Factors |
| alphaOutlier | Obtain Alpha-Outlier Regions for Well-Known Probability Distributions |
| AlphaPart | Partition/Decomposition of Breeding Values by Paths of Information |
| alphashape3d | Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud |
| AlphaSimR | Breeding Program Simulations |
| alphastable | Inference for Stable Distribution |
| alphavantager | Lightweight Interface to the Alpha Vantage API |
| alqrfe | Adaptive Lasso Quantile Regression with Fixed Effects |
| alr4 | Data to Accompany Applied Linear Regression 4th Edition |
| ALS | Multivariate Curve Resolution Alternating Least Squares (MCR-ALS) |
| ALSCPC | Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form |
| altadata | API Wrapper for Altadata.io |
| altair | Interface to 'Altair' |
| altdoc | Package Documentation Websites with 'Quarto', 'Docsify', 'Docute', or 'MkDocs' |
| AlteredPQR | Detection of Altered Protein Quantitative Relationships |
| altfuelr | Provides an Interface to the NREL Alternate Fuels Locator |
| altmeta | Alternative Meta-Analysis Methods |
| ALTopt | Optimal Experimental Designs for Accelerated Life Testing |
| altR2 | Alternative Estimators to Adjusted R-Squared |
| ALUES | Agricultural Land Use Evaluation System |
| amadeus | Accessing and Analyzing Large-Scale Environmental Data |
| amanida | Meta-Analysis for Non-Integral Data |
| amanpg | Alternating Manifold Proximal Gradient Method for Sparse PCA |
| amap | Another Multidimensional Analysis Package |
| amapGeocode | An Interface to the 'AutoNavi Maps' API Geocoding Services |
| amapro | Thin Wrapper for Mapping Library 'AMap' |
| AMAPVox | LiDAR Data Voxelisation |
| amazonadsR | Get Amazon Ads Data via the 'Windsor.ai' API |
| amazons3R | Get Amazon S3 Data via the 'Windsor.ai' API |
| amazonspR | Get Amazon Sp Data via the 'Windsor.ai' API |
| amberr | 'Amber' Electronic Data Capture Client |
| ambient | A Generator of Multidimensional Noise |
| ambit | Simulation and Estimation of Ambit Processes |
| AMCP | A Model Comparison Perspective |
| AMCTestmakeR | Generate LaTeX Code for Auto-Multiple-Choice (AMC) |
| Amelia | A Program for Missing Data |
| amelie | Anomaly Detection with Normal Probability Functions |
| amen | Additive and Multiplicative Effects Models for Networks and Relational Data |
| amerifluxr | Interface to 'AmeriFlux' Data Services |
| amerika | American Politics-Inspired Color Palette Generator |
| AmesHousing | The Ames Iowa Housing Data |
| ami | Checks for Various Computing Environments |
| AmigaFFH | Commodore Amiga File Format Handler |
| AMIM | Compute the Adjusted Market Inefficiency Measure |
| ammiBayes | Bayesian Ammi Model for Continuous Data |
| ammistability | Additive Main Effects and Multiplicative Interaction Model Stability Parameters |
| AMModels | Adaptive Management Model Manager |
| AmmoniaConcentration | Un-Ionized Ammonia Concentration |
| aMNLFA | Automated Moderated Nonlinear Factor Analysis Using 'M-plus' |
| AmoudSurv | Tractable Parametric Odds-Based Regression Models |
| amp | Statistical Test for the Multivariate Point Null Hypotheses |
| ampd | An Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals |
| AmpGram | Prediction of Antimicrobial Peptides |
| ampir | Predict Antimicrobial Peptides |
| AMPLE | Shiny Apps to Support Capacity Building on Harvest Control Rules |
| AmpliconDuo | Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts |
| AMR | Antimicrobial Resistance Data Analysis |
| amregtest | Runs Allelematch Regression Tests |
| amscorer | Clinical Scores Calculator for Healthcare |
| amt | Animal Movement Tools |
| amVennDiagram5 | Interactive Venn Diagrams |
| AmyloGram | Prediction of Amyloid Proteins |
| anabel | Analysis of Binding Events + l |
| AnaCoDa | Analysis of Codon Data under Stationarity using a Bayesian Framework |
| Anaconda | Targeted Differential and Global Enrichment Analysis of Taxonomic Rank by Shared Asvs |
| anacor | Simple and Canonical Correspondence Analysis |
| analogsea | Interface to 'DigitalOcean' |
| analogue | Analogue and Weighted Averaging Methods for Palaeoecology |
| AnalysisLin | Exploratory Data Analysis |
| analyzer | Data Analysis and Automated R Notebook Generation |
| AnanseSeurat | Construct ANANSE GRN-Analysis Seurat |
| AncestryMapper | Assigning Ancestry Based on Population References |
| AnchorRegression | Perform AnchorRegression |
| and | Construct Natural-Language Lists with Internationalization |
| andrews | Various Andrews Curves |
| Andromeda | Asynchronous Disk-Based Representation of Massive Data |
| andurinha | Make Spectroscopic Data Processing Easier |
| anesrake | ANES Raking Implementation |
| AnglerCreelSurveySimulation | Simulate a Bus Route Creel Survey of Anglers |
| angstromATE | Imports Log Files from Angstrom Engineering Thermal Evaporator |
| angstroms | Tools for 'ROMS' the Regional Ocean Modeling System |
| aniDom | Inferring Dominance Hierarchies and Estimating Uncertainty |
| anim.plots | Simple Animated Plots for R |
| animalEKF | Extended Kalman Filters for Animal Movement |
| AnimalHabitatNetwork | Networks Characterising the Physical Configurations of Animal Habitats |
| AnimalSequences | Analyse Animal Sequential Behaviour and Communication |
| animate | A Web-Based Graphics Device for Animated Visualisations |
| animation | A Gallery of Animations in Statistics and Utilities to Create Animations |
| animbook | Visualizing Changes in Performance Measures and Demographic Affiliations using Animation |
| animint2 | Animated Interactive Grammar of Graphics |
| animl | A Collection of ML Tools for Conservation Research |
| anipaths | Animation of Multiple Trajectories with Uncertainty |
| aniSNA | Statistical Network Analysis of Animal Social Networks |
| aniview | Animate Shiny and R Markdown Content when it Comes into View |
| anMC | Compute High Dimensional Orthant Probabilities |
| ANN2 | Artificial Neural Networks for Anomaly Detection |
| anndata | 'anndata' for R |
| annmatrix | Annotated Matrix: Matrices with Persistent Row and Column Annotations |
| AnnoProbe | Annotate the Gene Symbols for Probes in Expression Array |
| annotater | Annotate Package Load Calls |
| AnnotationBustR | Extract Subsequences from GenBank Annotations |
| annotator | Image Annotation and Polygon Outlining using Free Drawing |
| AnnuityRIR | Annuity Random Interest Rates |
| anocva | A Non-Parametric Statistical Test to Compare Clustering Structures |
| ANOFA | Analyses of Frequency Data |
| anoint | Analysis of Interactions |
| ANOM | Analysis of Means |
| anomalize | Tidy Anomaly Detection |
| anomaly | Detecting Anomalies in Data |
| anomo | Analysis of Moderation with the Monte Carlo Confidence Interval Method |
| ANOPA | Analyses of Proportions using Anscombe Transform |
| ANOVAIREVA | Interactive Document for Working with Analysis of Variance |
| ANOVAShiny | Interactive Document for Working with Analysis of Variance |
| ANOVAShiny2 | Interactive Document for Working with Analysis of Variance |
| anovir | Analysis of Virulence |
| anscombiser | Create Datasets with Identical Summary Statistics |
| ANSM5 | Functions and Data for the Book "Applied Nonparametric Statistical Methods", 5th Edition |
| AntAngioCOOL | Anti-Angiogenic Peptide Prediction |
| antaresEditObject | Edit an 'Antares' Simulation |
| antaresRead | Import, Manipulate and Explore the Results of an 'Antares' Simulation |
| anthro | Computation of the WHO Child Growth Standards |
| anthroplus | Computation of the WHO 2007 References for School-Age Children and Adolescents (5 to 19 Years) |
| AnthropMMD | An R Package for the Mean Measure of Divergence (MMD) |
| Anthropometry | Statistical Methods for Anthropometric Data |
| AntibodyTiters | Antibody Titer Analysis of Vaccinated Patients |
| anticlust | Subset Partitioning via Anticlustering |
| antitrust | Tools for Antitrust Practitioners |
| antiword | Extract Text from Microsoft Word Documents |
| AntMAN | Anthology of Mixture Analysis Tools |
| AnxietySleep | Sleep Quality and Anxiety in Confinement |
| anybadger | Create Custom Pipeline Badges |
| anyflights | Query 'nycflights13'-Like Air Travel Data for Given Years and Airports |
| anyLib | Install and Load Any Package from CRAN, Bioconductor or Github |
| anytime | Anything to 'POSIXct' or 'Date' Converter |
| ao | Alternating Optimization |
| AOboot | Bootstrapping in Different One-Way and Two-Way ANOVA |
| aod | Analysis of Overdispersed Data |
| aods3 | Analysis of Overdispersed Data using S3 Methods |
| aoos | Another Object Orientation System |
| aopdata | Data from the 'Access to Opportunities Project (AOP)' |
| Aoptbdtvc | A-Optimal Block Designs for Comparing Test Treatments with Controls |
| aoristic | Generates Aoristic Probability Distributions |
| aorsf | Accelerated Oblique Random Forests |
| aos | Animate on Scroll Library for 'shiny' |
| AOV1R | Inference in the Balanced One-Way ANOVA Model with Random Factor |
| AovBay | Classic, Nonparametric and Bayesian One-Way Analysis of Variance Panel |
| apa | Format Outputs of Statistical Tests According to APA Guidelines |
| apache.sedona | R Interface for Apache Sedona |
| ApacheLogProcessor | Process the Apache Web Server Log Files |
| APackOfTheClones | Visualization of Clonal Expansion for Single Cell Immune Profiles |
| apaTables | Create American Psychological Association (APA) Style Tables |
| apaText | Create R Markdown Text for Results in the Style of the American Psychological Association (APA) |
| apc | Age-Period-Cohort Analysis |
| APCalign | Resolving Plant Taxon Names Using the Australian Plant Census |
| APCanalysis | Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons |
| apcf | Adapted Pair Correlation Function |
| APCI | A New Age-Period-Cohort Model for Describing and Investigating Inter-Cohort Differences and Life Course Dynamics |
| apcluster | Affinity Propagation Clustering |
| aPCoA | Covariate Adjusted PCoA Plot |
| APCtools | Routines for Descriptive and Model-Based APC Analysis |
| apdesign | An Implementation of the Additive Polynomial Design Matrix |
| ape | Analyses of Phylogenetics and Evolution |
| aPEAR | Advanced Pathway Enrichment Analysis Representation |
| apercu | Quick Look at your Data |
| apex | Phylogenetic Methods for Multiple Gene Data |
| apexcharter | Create Interactive Chart with the JavaScript 'ApexCharts' Library |
| APFr | Multiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation |
| aphid | Analysis with Profile Hidden Markov Models |
| aphylo | Statistical Inference and Prediction of Annotations in Phylogenetic Trees |
| api2lm | Functions and Data Sets for the Book "A Progressive Introduction to Linear Models" |
| APIS | Auto-Adaptive Parentage Inference Software Tolerant to Missing Parents |
| apisensr | Interface to 'episensr' for Sensitivity Analysis of Epidemiological Results |
| aplore3 | Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013) |
| aplot | Decorate a 'ggplot' with Associated Information |
| aplotExtra | Creating Composite Plots using 'aplot' |
| aplpack | Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others |
| apmx | Automated Population Pharmacokinetic Dataset Assembly |
| apng | Convert Png Files into Animated Png |
| Apoderoides | Prioritize and Delete Erroneous Taxa in a Large Phylogenetic Tree |
| apollo | Tools for Choice Model Estimation and Application |
| Apollonius | 2D Apollonius Graphs |
| appeears | Interface to 'AppEEARS' NASA Web Services |
| APPEstimation | Adjusted Prediction Model Performance Estimation |
| appleadsR | Get Apple Search Ads Data via the 'Windsor.ai' API |
| applicable | A Compilation of Applicability Domain Methods |
| AppliedPredictiveModeling | Functions and Data Sets for 'Applied Predictive Modeling' |
| appnn | Amyloid Propensity Prediction Neural Network |
| apportion | Apportion Seats |
| appRiori | Code and Obtain Customized Planned Comparisons with 'appRiori' |
| approximator | Bayesian Prediction of Complex Computer Codes |
| approxmatch | Approximately Optimal Fine Balance Matching with Multiple Groups |
| appsflyeR | Get Data from 'Appsflyer' via the 'Windsor.ai' API |
| appsheet | An Interface to the 'AppSheet' API |
| aprean3 | Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998) |
| aprof | Amdahl's Profiler, Directed Optimization Made Easy |
| apsimx | Inspect, Read, Edit and Run 'APSIM' "Next Generation" and 'APSIM' Classic |
| apt | Asymmetric Price Transmission |
| APtools | Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times |
| apyramid | Visualize Population Pyramids Aggregated by Age |
| AQEval | Air Quality Evaluation |
| aqfig | Display Air Quality Model Output and Monitoring Data |
| AQLSchemes | Retrieving Acceptance Sampling Schemes |
| aqp | Algorithms for Quantitative Pedology |
| AquaAnalytix | Water Quality Analysis |
| AquaBEHER | Estimation and Prediction of Wet Season Calendar and Soil Water Balance for Agriculture |
| AQuadtree | Confidentiality of Spatial Point Data |
| AquaEnv | Integrated Development Toolbox for Aquatic Chemical Model Generation |
| AQuality | Water and Measurements Quality |
| AquaticLifeHistory | Life History Analysis Tools |
| aquodom | Access to Aquo domaintables from R (Dutch) |
| AR | Another Look at the Acceptance-Rejection Method |
| ar.matrix | Simulate Auto Regressive Data from Precision Matricies |
| arabic2kansuji | Convert Arabic Numerals to Kansuji |
| arabicStemR | Arabic Stemmer for Text Analysis |
| arakno | ARAchnid KNowledge Online |
| ArArRedux | Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data |
| arc | Association Rule Classification |
| ARCensReg | Fitting Univariate Censored Linear Regression Model with Autoregressive Errors |
| arcgeocoder | Geocoding with the 'ArcGIS' REST API Service |
| arcgisgeocode | A Robust Interface to ArcGIS 'Geocoding Services' |
| arcgislayers | An Interface to ArcGIS Data Services |
| arcgisutils | ArcGIS Utility Functions |
| ArchaeoPhases | Post-Processing of Markov Chain Monte Carlo Simulations for Chronological Modelling |
| ArchaeoPhases.dataset | Data Sets for 'ArchaeoPhases' Vignettes |
| archdata | Example Datasets from Archaeological Research |
| archeofrag | Refitting and Spatial Analysis in Archaeology |
| archeoViz | Visualisation, Exploration, and Web Communication of Archaeological Spatial Data |
| archetypal | Finds the Archetypal Analysis of a Data Frame |
| archetyper | An Archetype for Data Mining and Data Science Projects |
| archetypes | Archetypal Analysis |
| archiDART | Plant Root System Architecture Analysis Using DART and RSML Files |
| archive | Multi-Format Archive and Compression Support |
| archiveRetriever | Retrieve Archived Web Pages from the 'Internet Archive' |
| archivist | Tools for Storing, Restoring and Searching for R Objects |
| archivist.github | Tools for Archiving, Managing and Sharing R Objects via GitHub |
| ArCo | Artificial Counterfactual Package |
| ARCokrig | Autoregressive Cokriging Models for Multifidelity Codes |
| arcpbf | Process ArcGIS Protocol Buffer FeatureCollections |
| arcpullr | Pull Data from an 'ArcGIS REST' API |
| arcpy | Interface to 'ArcGIS' 'Python' Modules |
| arctools | Processing and Physical Activity Summaries of Minute Level Activity Data |
| ArDec | Time Series Autoregressive-Based Decomposition |
| ARDECO | Annual Regional Database of the European Commission (ARDECO) |
| ARDL | ARDL, ECM and Bounds-Test for Cointegration |
| ardl.nardl | Linear and Nonlinear Autoregressive Distributed Lag Models: General-to-Specific Approach |
| ards | Creates Analysis Results Datasets |
| area | Calculate Area of Triangles and Polygons |
| areabiplot | Area Biplot |
| areal | Areal Weighted Interpolation |
| arealDB | Harmonise and Integrate Heterogeneous Areal Data |
| areaplot | Plot Stacked Areas and Confidence Bands as Filled Polygons |
| arena2r | Plots, Summary Statistics and Tools for Arena Simulation Users |
| arenar | Arena for the Exploration and Comparison of any ML Models |
| arf | Adversarial Random Forests |
| arfima | Fractional ARIMA (and Other Long Memory) Time Series Modeling |
| Argentum | Access and Import WMS and WFS Data from Argentine Organizations |
| argo | Accurate Estimation of Influenza Epidemics using Google Search Data |
| argoFloats | Analysis of Oceanographic Argo Floats |
| argonDash | Argon Shiny Dashboard Template |
| argonR | R Interface to Argon HTML Design |
| ARGOS | Automatic Regression for Governing Equations (ARGOS) |
| argosfilter | Argos Locations Filter |
| argparse | Command Line Optional and Positional Argument Parser |
| argparser | Command-Line Argument Parser |
| argus | Random Variate Generator for the Argus Distribution |
| ARHT | Adaptable Regularized Hotelling's T^2 Test for High-Dimensional Data |
| ari | Automated R Instructor |
| ARIbrain | All-Resolution Inference |
| aricode | Efficient Computations of Standard Clustering Comparison Measures |
| AriGaMyANNSVR | Hybrid ARIMA-GARCH and Two Specially Designed ML-Based Models |
| arima2 | Likelihood Based Inference for ARIMA Modeling |
| ARIMAANN | Time Series Forecasting using ARIMA-ANN Hybrid Model |
| arkdb | Archive and Unarchive Databases Using Flat Files |
| arkhe | Tools for Cleaning Rectangular Data |
| arlclustering | Exploring Social Network Structures Through Friendship-Driven Community Detection with Association Rules Mining |
| arm | Data Analysis Using Regression and Multilevel/Hierarchical Models |
| ARMALSTM | Fitting of Hybrid ARMA-LSTM Models |
| armspp | Adaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp' |
| arnie | "Arnie" box office records 1982-2014 |
| aroma.affymetrix | Analysis of Large Affymetrix Microarray Data Sets |
| aroma.apd | A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated] |
| aroma.cn | Copy-Number Analysis of Large Microarray Data Sets |
| aroma.core | Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework |
| Arothron | Geometric Morphometric Methods and Virtual Anthropology Tools |
| ARPALData | Retrieving and Analyzing Air Quality and Weather Data from ARPA Lombardia |
| ARpLMEC | Censored Mixed-Effects Models with Different Correlation Structures |
| ARPobservation | Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes |
| arpr | Advanced R Pipes |
| aRpsDCA | Arps Decline Curve Analysis in R |
| arrangements | Fast Generators and Iterators for Permutations, Combinations, Integer Partitions and Compositions |
| arrApply | Apply a Function to a Margin of an Array |
| arrayhelpers | Convenience Functions for Arrays |
| arrg | Flexible Argument Parsing for R Scripts |
| arrow | Integration to 'Apache' 'Arrow' |
| arrowheadr | Make Custom Arrowheads |
| ars | Adaptive Rejection Sampling |
| arse | Area of Resilience to Stress Event |
| arsenal | An Arsenal of 'R' Functions for Large-Scale Statistical Summaries |
| ART | Aligned Rank Transform for Nonparametric Factorial Analysis |
| artfima | ARTFIMA Model Estimation |
| arthistory | Art History Textbook Data |
| ARTofR | To Insert Title, Divider, and Block of Comments |
| ARTool | Aligned Rank Transform |
| artpack | Creates Generative Art Data |
| aRtsy | Generative Art with 'ggplot2' |
| ARTtransfer | Adaptive and Robust Pipeline for Transfer Learning |
| arules | Mining Association Rules and Frequent Itemsets |
| arulesCBA | Classification Based on Association Rules |
| arulesNBMiner | Mining NB-Frequent Itemsets and NB-Precise Rules |
| arulesSequences | Mining Frequent Sequences |
| arulesViz | Visualizing Association Rules and Frequent Itemsets |
| ARUtools | Management and Processing of Autonomous Recording Unit (ARU) Data |
| aRxiv | Interface to the arXiv API |
| asaur | Data Sets for "Applied Survival Analysis Using R"" |
| asbio | A Collection of Statistical Tools for Biologists |
| ascentTraining | Ascent Training Datasets |
| ascii | Export R Objects to Several Markup Languages |
| asciicast | Create 'Ascii' Screen Casts from R Scripts |
| asciichartr | Lightweight ASCII Line Graphs |
| asciiruler | Render an ASCII Ruler |
| asciiSetupReader | Reads Fixed-Width ASCII Data Files (.txt or .dat) that Have Accompanying Setup Files (.sps or .sas) |
| ascotraceR | Simulate the Spread of Ascochyta Blight in Chickpea |
| asd | Simulations for Adaptive Seamless Designs |
| asdreader | Reading ASD Binary Files in R |
| ASGS.foyer | Interface to the Australian Statistical Geography Standard |
| ash | David Scott's ASH Routines |
| ashapesampler | Generating Alpha Shapes |
| ashr | Methods for Adaptive Shrinkage, using Empirical Bayes |
| asht | Applied Statistical Hypothesis Tests |
| AsioHeaders | 'Asio' C++ Header Files |
| askgpt | Asking GPT About R Stuff |
| askpass | Password Entry Utilities for R, Git, and SSH |
| aslib | Interface to the Algorithm Selection Benchmark Library |
| asm | Optimal Convex M-Estimation for Linear Regression via Antitonic Score Matching |
| ASMap | Linkage Map Construction using the MSTmap Algorithm |
| ASMbook | Functions for the Book "Applied Statistical Modeling for Ecologists" |
| asmbPLS | Predicting and Classifying Patient Phenotypes with Multi-Omics Data |
| asnipe | Animal Social Network Inference and Permutations for Ecologists |
| aspace | Functions for Estimating Centrographic Statistics |
| aspect | A General Framework for Multivariate Analysis with Optimal Scaling |
| aspi | Analysis of Symmetry of Parasitic Infections |
| aspline | Spline Regression with Adaptive Knot Selection |
| aSPU | Adaptive Sum of Powered Score Test |
| asremlPlus | Augments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences |
| ASRgenomics | Complementary Genomic Functions |
| ASSA | Applied Singular Spectrum Analysis (ASSA) |
| assert | Validate Function Arguments |
| assertable | Verbose Assertions for Tabular Data (Data.frames and Data.tables) |
| assertions | Simple Assertions for Beautiful and Customisable Error Messages |
| assertr | Assertive Programming for R Analysis Pipelines |
| assertthat | Easy Pre and Post Assertions |
| assessor | Assessment Tools for Regression Models with Discrete and Semicontinuous Outcomes |
| AssetAllocation | Backtesting Simple Asset Allocation Strategies |
| AssetCorr | Estimating Asset Correlations from Default Data |
| AssetPricing | Optimal Pricing of Assets with Fixed Expiry Date |
| assignPOP | Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework |
| assignR | Infer Geographic Origin from Isotopic Data |
| assist | A Suite of R Functions Implementing Spline Smoothing Techniques |
| ASSISTant | Adaptive Subgroup Selection in Group Sequential Trials |
| AssocAFC | Allele Frequency Comparison |
| AssocBin | Measuring Association with Recursive Binning |
| assocInd | Implements New and Existing Association Indices for Constructing Animal Social Networks |
| AssocTests | Genetic Association Studies |
| assortnet | Calculate the Assortativity Coefficient of Weighted and Binary Networks |
| AST | Age-Spatial-Temporal Model |
| ast2ast | Translates an R Function to a C++ Function |
| aster | Aster Models |
| aster2 | Aster Models |
| asteRisk | Computation of Satellite Position |
| AsthmaNHANES | Asthma Data Sets from NHANES |
| astrochron | A Computational Tool for Astrochronology |
| astrodatR | Astronomical Data |
| astroFns | Astronomy: Time and Position Functions, Misc. Utilities |
| astsa | Applied Statistical Time Series Analysis |
| asus | Adaptive SURE Thresholding Using Side Information |
| ASV | Stochastic Volatility Models with or without Leverage |
| AsyK | Kernel Density Estimation |
| asylum | Data on Asylum and Resettlement for the UK |
| asymLD | Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data |
| AsymmetricSORDs | Asymmetric Second Order Rotatable Designs (AsymmetricSORDs) |
| asymmetry | Multidimensional Scaling of Asymmetric Proximities |
| asymmetry.measures | Asymmetry Measures for Probability Density Functions |
| asympTest | A Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples |
| asymptor | Estimate Asymptomatic Cases via Capture/Recapture Methods |
| AsynchLong | Regression Analysis of Sparse Asynchronous Longitudinal Data |
| ata | Automated Test Assembly |
| atable | Create Tables for Reporting Clinical Trials |
| ATAforecasting | Automatic Time Series Analysis and Forecasting using the Ata Method |
| atakrig | Area-to-Area Kriging |
| ATbounds | Bounding Treatment Effects by Limited Information Pooling |
| ATE.ERROR | Estimating ATE with Misclassified Outcomes and Mismeasured Covariates |
| AteMeVs | Average Treatment Effects with Measurement Error and Variable Selection for Confounders |
| atime | Asymptotic Timing |
| atlas | Stanford 'ATLAS' Search Engine API |
| atlasapprox | Cell Atlas Approximations |
| AtlasMaker | Make Multiple 'leaflet' Maps in 'Shiny' |
| AtmChile | Download Air Quality and Meteorological Information of Chile |
| atmopt | Analysis-of-Marginal-Tail-Means |
| ATNr | Run Allometric Trophic Networks Models |
| atom4R | Tools to Handle and Publish Metadata as 'Atom' XML Format |
| atpolR | ATPOL Grid Implementation |
| ATQ | Alert Time Quality - Evaluating Timely Epidemic Metrics |
| ATR | Alternative Tree Representation |
| atRisk | At-Risk |
| atrrr | Wrapper for the 'AT' Protocol Behind 'Bluesky' |
| aTSA | Alternative Time Series Analysis |
| attachment | Deal with Dependencies |
| attempt | Tools for Defensive Programming |
| attention | Self-Attention Algorithm |
| attenuation | Correcting for Attenuation Due to Measurement Error |
| attrib | Attributable Burden of Disease |
| AUC | Threshold Independent Performance Measures for Probabilistic Classifiers |
| auctestr | Statistical Testing for AUC Data |
| auctionr | Estimate First-Price Auction Model |
| audio | Audio Interface for R |
| audiometry | Standard Conform Pure Tone Audiometry (PTA) Plots |
| audit | Bounds for Accounting Populations |
| auditor | Model Audit - Verification, Validation, and Error Analysis |
| audrex | Automatic Dynamic Regression using Extreme Gradient Boosting |
| audubon | Japanese Text Processing Tools |
| augmentedRCBD | Analysis of Augmented Randomised Complete Block Designs |
| augSIMEX | Analysis of Data with Mixed Measurement Error and Misclassification in Covariates |
| auk | eBird Data Extraction and Processing in R |
| aum | Area Under Minimum of False Positives and Negatives |
| AurieLSHGaussian | Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections |
| auRoc | Various Methods to Estimate the AUC |
| ausplotsR | TERN AusPlots Australian Ecosystem Monitoring Data |
| AustralianPoliticians | Provides Datasets About Australian Politicians |
| AUtests | Approximate Unconditional and Permutation Tests |
| auth0 | Authentication in Shiny with Auth0 |
| auto.pca | Automatic Variable Reduction Using Principal Component Analysis |
| AutoAds | Advertisement Metrics Calculation |
| autoBagging | Learning to Rank Bagging Workflows with Metalearning |
| autocogs | Automatic Cognostic Summaries |
| autoCovariateSelection | Automated Covariate Selection Using HDPS Algorithm |
| AutoDeskR | An Interface to the 'AutoDesk' 'API' Platform |
| autoEnsemble | Automated Stacked Ensemble Classifier for Severe Class Imbalance |
| autoFC | Automatic Construction of Forced-Choice Tests |
| autoFRK | Automatic Fixed Rank Kriging |
| autogam | Automate the Creation of Generalized Additive Models (GAMs) |
| autoharp | Semi-Automatic Grading of R and Rmd Scripts |
| autohrf | Automated Generation of Data-Informed GLM Models in Task-Based fMRI Data Analysis |
| autoimage | Multiple Heat Maps for Projected Coordinates |
| autokeras | R Interface to 'AutoKeras' |
| automagic | Automagically Document and Install Packages Necessary to Run R Code |
| automap | Automatic Interpolation Package |
| autometric | Background Resource Logging |
| autoMFA | Algorithms for Automatically Fitting MFA Models |
| automl | Deep Learning with Metaheuristic |
| autoMrP | Improving MrP with Ensemble Learning |
| autonewsmd | Auto-Generate Changelog using Conventional Commits |
| AutoPipe | Automated Transcriptome Classifier Pipeline: Comprehensive Transcriptome Analysis |
| autoplotly | Automatic Generation of Interactive Visualizations for Statistical Results |
| Autoplotprotein | Development of Visualization Tools for Protein Sequence |
| AutoPlots | Creating Echarts Visualizations as Easy as Possible |
| autoRasch | Semi-Automated Rasch Analysis |
| autoReg | Automatic Linear and Logistic Regression and Survival Analysis |
| AutoregressionMDE | Minimum Distance Estimation in Autoregressive Model |
| AutoScore | An Interpretable Machine Learning-Based Automatic Clinical Score Generator |
| autoScorecard | Fully Automatic Generation of Scorecards |
| Autoseed | Retrieve Disease-Related Genes from Public Sources |
| autoshiny | Automatic Transformation of an 'R' Function into a 'shiny' App |
| autostats | Auto Stats |
| AutoStepwiseGLM | Builds Stepwise GLMs via Train and Test Approach |
| autostsm | Automatic Structural Time Series Models |
| autothresholdr | An R Port of the 'ImageJ' Plugin 'Auto Threshold' |
| AutoTransQF | A Novel Automatic Shifted Log Transformation |
| autoTS | Automatic Model Selection and Prediction for Univariate Time Series |
| autovi | Auto Visual Inference with Computer Vision Models |
| AutoWeatherIndices | Calculating Weather Indices |
| AutoWMM | Perform the Weighted Multiplier Method on Trees |
| av | Working with Audio and Video in R |
| available | Check if the Title of a Package is Available, Appropriate and Interesting |
| avar | Allan Variance |
| averisk | Calculation of Average Population Attributable Fractions and Confidence Intervals |
| avesperu | Access to the List of Birds Species of Peru |
| AVGAS | A Variable Selection using Genetic Algorithms |
| avidaR | A Computational Biologist’s Toolkit To Get Data From 'avidaDB' |
| AvInertia | Calculate the Inertial Properties of a Flying Bird |
| aVirtualTwins | Adaptation of Virtual Twins Method from Jared Foster |
| avocado | Weekly Hass Avocado Sales Summary |
| avotrex | A Global Dataset of Anthropogenic Extinct Birds and their Traits: Phylogeny Builder |
| aweek | Convert Dates to Arbitrary Week Definitions |
| aweSOM | Interactive Self-Organizing Maps |
| awinR | Get Data from 'Awin' via the 'Windsor.ai' API |
| AWR | 'AWS' Java 'SDK' for R |
| AWR.Kinesis | Amazon 'Kinesis' Consumer Application for Stream Processing |
| aws | Adaptive Weights Smoothing |
| aws.alexa | Client for the Amazon Alexa Web Information Services API |
| aws.comprehend | Client for 'AWS Comprehend' |
| aws.ec2metadata | Get EC2 Instance Metadata |
| aws.ecx | Communicating with AWS EC2 and ECS using AWS REST APIs |
| aws.iam | AWS IAM Client Package |
| aws.kms | 'AWS Key Management Service' Client Package |
| aws.lambda | AWS Lambda Client Package |
| aws.polly | Client for AWS Polly |
| aws.s3 | 'AWS S3' Client Package |
| aws.signature | Amazon Web Services Request Signatures |
| aws.transcribe | Client for 'AWS Transcribe' |
| aws.translate | Client for 'AWS Translate' |
| aws.wrfsmn | Data Processing of SMN Hi-Res Weather Forecast from 'AWS' |
| awsMethods | Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi' |
| axisandallies | Axis and Allies Spring |
| AZIAD | Analyzing Zero-Inflated and Zero-Altered Data |
| azlogr | Logging in 'R' and Post to 'Azure Log Analytics' Workspace |
| AzureAppInsights | Include Azure Application Insights in Shiny Apps |
| AzureAuth | Authentication Services for Azure Active Directory |
| AzureCognitive | Interface to Azure Cognitive Services |
| AzureContainers | Interface to 'Container Instances', 'Docker Registry' and 'Kubernetes' in 'Azure' |
| AzureCosmosR | Interface to the 'Azure Cosmos DB' 'NoSQL' Database Service |
| AzureGraph | Simple Interface to 'Microsoft Graph' |
| AzureKeyVault | Key and Secret Management in 'Azure' |
| AzureKusto | Interface to 'Kusto'/'Azure Data Explorer' |
| azuremlsdk | Interface to the 'Azure Machine Learning' 'SDK' |
| AzureQstor | Interface to 'Azure Queue Storage' |
| AzureRMR | Interface to 'Azure Resource Manager' |
| AzureStor | Storage Management in 'Azure' |
| AzureTableStor | Interface to the Table Storage Service in 'Azure' |
| AzureVision | Interface to Azure Computer Vision Services |
| AzureVM | Virtual Machines in 'Azure' |
| AzureVMmetadata | Interface to Azure Virtual Machine Instance Metadata |
| b64 | Fast and Vectorized Base 64 Engine |
| babel | Ribosome Profiling Data Analysis |
| babelgene | Gene Orthologs for Model Organisms in a Tidy Data Format |
| babelmixr2 | Use 'nlmixr2' to Interact with Open Source and Commercial Software |
| babelwhale | Talking to 'Docker' and 'Singularity' Containers |
| babette | Control 'BEAST2' |
| babynames | US Baby Names 1880-2017 |
| babynamesIL | Israel Baby Names 1948-2022 |
| BACCO | Bayesian Analysis of Computer Code Output (BACCO) |
| BACCT | Bayesian Augmented Control for Clinical Trials |
| bacistool | Bayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials |
| backbone | Extracts the Backbone from Graphs |
| backpipe | Backward Pipe (Right-to-Left) Operator |
| backports | Reimplementations of Functions Introduced Since R-3.0.0 |
| backShift | Learning Causal Cyclic Graphs from Unknown Shift Interventions |
| backtest | Exploring Portfolio-Based Conjectures About Financial Instruments |
| baclava | Bayesian Analysis of Cancer Latency with Auxiliary Variable Augmentation |
| bacondecomp | Goodman-Bacon Decomposition |
| BACprior | Choice of Omega in the BAC Algorithm |
| bacr | Bayesian Adjustment for Confounding |
| badgen | Fast and Simple Badge Generator |
| badger | Badge for R Package |
| baf | Block Assignment Files |
| baffle | Make Waffle Plots with Base Graphics |
| bage | Bayesian Estimation and Forecasting of Age-Specific Rates |
| bagged.outliertrees | Robust Explainable Outlier Detection Based on OutlierTree |
| baggingbwsel | Bagging Bandwidth Selection in Kernel Density and Regression Estimation |
| baggr | Bayesian Aggregate Treatment Effects |
| BAGofT | A Binary Regression Adaptive Goodness-of-Fit Test (BAGofT) |
| baguette | Efficient Model Functions for Bagging |
| bagyo | Philippine Tropical Cyclones Data |
| bahc | Filter Covariance and Correlation Matrices with Bootstrapped-Averaged Hierarchical Ansatz |
| bain | Bayes Factors for Informative Hypotheses |
| baizer | Useful Functions for Data Processing |
| bakeoff | Data from "The Great British Bake Off" |
| baker | "Nested Partially Latent Class Models" |
| bakR | Analyze and Compare Nucleotide Recoding RNA Sequencing Datasets |
| BalanceCheck | Balance Check for Multiple Covariates in Matched Observational Studies |
| BalancedSampling | Balanced and Spatially Balanced Sampling |
| baldur | Bayesian Hierarchical Modeling for Label-Free Proteomics |
| Ball | Statistical Inference and Sure Independence Screening via Ball Statistics |
| BALLI | Expression RNA-Seq Data Analysis Based on Linear Mixed Model |
| BallMapper | The Ball Mapper Algorithm |
| BaM | Functions and Datasets for "Bayesian Methods: A Social and Behavioral Sciences Approach" |
| bama | High Dimensional Bayesian Mediation Analysis |
| BAMBI | Bivariate Angular Mixture Models |
| bambooHR | A Wrapper to the 'BambooHR' API |
| bamdit | Bayesian Meta-Analysis of Diagnostic Test Data |
| bamlss | Bayesian Additive Models for Location, Scale, and Shape (and Beyond) |
| bamm | Species Distribution Models as a Function of Biotic, Abiotic and Movement Factors (BAM) |
| BAMMtools | Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees |
| bamp | Bayesian Age-Period-Cohort Modeling and Prediction |
| BANAM | Bayesian Analysis of the Network Autocorrelation Model |
| bandicoot | Light-Weight 'python'-Like Object-Oriented System |
| bandit | Functions for Simple a/B Split Test and Multi-Armed Bandit Analysis |
| banditpam | Almost Linear-Time k-Medoids Clustering |
| bandsfdp | Compute Upper Prediction Bounds on the FDP in Competition-Based Setups |
| banffIT | Automatize Diagnosis Standardized Assignation Using the Banff Classification |
| bang | Bayesian Analysis, No Gibbs |
| bangladesh | Provides Ready to Use Shapefiles for Geographical Map of Bangladesh |
| bannerCommenter | Make Banner Comments with a Consistent Format |
| BANOVA | Hierarchical Bayesian ANOVA Models |
| banter | BioAcoustic eveNT classifiER |
| banxicoR | Download Data from the Bank of Mexico |
| baorista | Bayesian Aoristic Analyses |
| bapred | Batch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data) |
| BAR | Bayesian Adaptive Randomization |
| BarBorGradient | Function Minimum Approximator |
| barcode | Render Barcode Distribution Plots |
| baRcodeR | Label Creation for Tracking and Collecting Data from Biological Samples |
| BarcodingR | Species Identification using DNA Barcodes |
| bardr | Complete Works of William Shakespeare in Tidy Format |
| bark | Bayesian Additive Regression Kernels |
| Barnard | Barnard's Unconditional Test |
| barrks | Calculate Bark Beetle Phenology Using Different Models |
| BART | Bayesian Additive Regression Trees |
| bartCause | Causal Inference using Bayesian Additive Regression Trees |
| bartcs | Bayesian Additive Regression Trees for Confounder Selection |
| bartMachine | Bayesian Additive Regression Trees |
| bartMachineJARs | bartMachine JARs |
| bartMan | Create Visualisations for BART Models |
| baRulho | Quantifying (Animal) Sound Degradation |
| BAS | Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling |
| basad | Bayesian Variable Selection with Shrinking and Diffusing Priors |
| base.rms | Convert Regression Between Base Function and 'rms' Package |
| base64 | Base64 Encoder and Decoder |
| base64enc | Tools for base64 encoding |
| base64url | Fast and URL-Safe Base64 Encoder and Decoder |
| baseballr | Acquiring and Analyzing Baseball Data |
| basecamb | Utilities for Streamlined Data Import, Imputation and Modelling |
| basedosdados | 'Base Dos Dados' R Client |
| basefun | Infrastructure for Computing with Basis Functions |
| baseline | Baseline Correction of Spectra |
| basemaps | Accessing Spatial Basemaps in R |
| basemodels | Baseline Models for Classification and Regression |
| baseq | Basic Sequence Processing Tool for Biological Data |
| BaseSet | Working with Sets the Tidy Way |
| BaseTempSeed | Estimation of Seed Germination Base Temperature in Thermal Modelling |
| basetheme | Themes for Base Graphics Plots |
| basf | Plot Simple Features with 'base' Sensibilities |
| basicdrm | Fit Hill Dose Response Models |
| basicMCMCplots | Trace Plots, Density Plots and Chain Comparisons for MCMC Samples |
| basictabler | Construct Rich Tables for Output to 'HTML'/'Excel' |
| basifoR | Retrieval and Processing of the Spanish National Forest Inventory |
| BASiNET | Classification of RNA Sequences using Complex Network Theory |
| BASiNETEntropy | Classification of RNA Sequences using Complex Network and Information Theory |
| BaSkePro | Bayesian Model to Archaeological Faunal Skeletal Profiles |
| basket | Basket Trial Analysis |
| BasketballAnalyzeR | Analysis and Visualization of Basketball Data |
| baskexact | Analytical Calculation of Basket Trial Operating Characteristics |
| basksim | Simulation-Based Calculation of Basket Trial Operating Characteristics |
| BASS | Bayesian Adaptive Spline Surfaces |
| BaSTA | Age-Specific Bayesian Survival Trajectory Analysis from Incomplete Census or Capture-Recapture/Recovery Data |
| BAT | Biodiversity Assessment Tools |
| batata | Managing Packages Removal and Installation |
| batch | Batching Routines in Parallel and Passing Command-Line Arguments to R |
| BatchExperiments | Statistical Experiments on Batch Computing Clusters |
| BatchGetSymbols | Downloads and Organizes Financial Data for Multiple Tickers |
| BatchJobs | Batch Computing with R |
| batchLLM | Batch Process LLM Text Completions Using a Data Frame |
| batchmeans | Consistent Batch Means Estimation of Monte Carlo Standard Errors |
| batchmix | Semi-Supervised Bayesian Mixture Models Incorporating Batch Correction |
| batchscr | Batch Script Helpers |
| batchtma | Batch Effect Adjustments |
| batchtools | Tools for Computation on Batch Systems |
| bate | Computes Bias-Adjusted Treatment Effect |
| batman | Convert Categorical Representations of Logicals to Actual Logicals |
| batsch | Real-Time PCR Data Sets by Batsch et al. (2008) |
| BATSS | Bayesian Adaptive Trial Simulator Software (BATSS) for Generalised Linear Models |
| batteryreduction | An R Package for Data Reduction by Battery Reduction |
| BAwiR | Analysis of Basketball Data |
| bayclumpr | Bayesian Analysis of Clumped Isotope Datasets |
| baycn | Bayesian Inference for Causal Networks |
| bayefdr | Bayesian Estimation and Optimisation of Expected False Discovery Rate |
| Bayenet | Bayesian Quantile Elastic Net for Genetic Study |
| bayes4psy | User Friendly Bayesian Data Analysis for Psychology |
| bayesAB | Fast Bayesian Methods for AB Testing |
| bayesammi | Bayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model |
| bayesanova | Bayesian Inference in the Analysis of Variance via Markov Chain Monte Carlo in Gaussian Mixture Models |
| BayesARIMAX | Bayesian Estimation of ARIMAX Model |
| bayesassurance | Bayesian Assurance Computation |
| BayesBEKK | Bayesian Estimation of Bivariate Volatility Model |
| BayesBinMix | Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions |
| bayesbio | Miscellaneous Functions for Bioinformatics and Bayesian Statistics |
| bayesboot | An Implementation of Rubin's (1981) Bayesian Bootstrap |
| BayesBP | Bayesian Estimation using Bernstein Polynomial Fits Rate Matrix |
| BayesCACE | Bayesian Model for CACE Analysis |
| BayesCombo | Bayesian Evidence Combination |
| BayesComm | Bayesian Community Ecology Analysis |
| bayescopulareg | Bayesian Copula Regression |
| bayescount | Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC |
| BayesCR | Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions |
| bayesCT | Simulation and Analysis of Adaptive Bayesian Clinical Trials |
| BayesCTDesign | Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data |
| bayesCureRateModel | Bayesian Cure Rate Modeling for Time-to-Event Data |
| BayesCVI | Bayesian Cluster Validity Index |
| BayesDA | Functions and Datasets for the book "Bayesian Data Analysis" |
| bayesDccGarch | Methods and Tools for Bayesian Dynamic Conditional Correlation GARCH(1,1) Model |
| BayesDesign | Bayesian Single-Arm Design with Survival Endpoints |
| bayesdfa | Bayesian Dynamic Factor Analysis (DFA) with 'Stan' |
| BayesDIP | Bayesian Decreasingly Informative Priors for Early Termination Phase II Trials |
| BayesDissolution | Bayesian Models for Dissolution Testing |
| bayesdistreg | Bayesian Distribution Regression |
| BayesDLMfMRI | Statistical Analysis for Task-Based Fmri Data |
| bayesDP | Implementation of the Bayesian Discount Prior Approach for Clinical Trials |
| bayesEO | Bayesian Smoothing of Remote Sensing Image Classification |
| BayesESS | Determining Effective Sample Size |
| BayesFactor | Computation of Bayes Factors for Common Designs |
| BayesFBHborrow | Bayesian Dynamic Borrowing with Flexible Baseline Hazard Function |
| BayesFluxR | Implementation of Bayesian Neural Networks |
| BayesFM | Bayesian Inference for Factor Modeling |
| BayesfMRI | Spatial Bayesian Methods for Task Functional MRI Studies |
| bayesforecast | Bayesian Time Series Modeling with Stan |
| bayesGAM | Fit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo |
| bayesGARCH | Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations |
| BayesGmed | Bayesian Causal Mediation Analysis using 'Stan' |
| BayesGOF | Bayesian Modeling via Frequentist Goodness-of-Fit |
| BayesGP | Efficient Implementation of Gaussian Process in Bayesian Hierarchical Models |
| BayesGPfit | Fast Bayesian Gaussian Process Regression Fitting |
| BayesGrowth | Estimate Fish Growth Using MCMC Analysis |
| BayesGWQS | Bayesian Grouped Weighted Quantile Sum Regression |
| bayesian | Bindings for Bayesian TidyModels |
| bayesianETAS | Bayesian Estimation of the ETAS Model for Earthquake Occurrences |
| BayesianFactorZoo | Bayesian Solutions for the Factor Zoo: We Just Ran Two Quadrillion Models |
| Bayesiangammareg | Bayesian Gamma Regression: Joint Mean and Shape Modeling |
| BayesianGLasso | Bayesian Graphical Lasso |
| BayesianLaterality | Predict Brain Asymmetry Based on Handedness and Dichotic Listening |
| BayesianMCPMod | Simulate, Evaluate, and Analyze Dose Finding Trials with Bayesian MCPMod |
| BayesianMediationA | Bayesian Mediation Analysis |
| BayesianNetwork | Bayesian Network Modeling and Analysis |
| BayesianPlatformDesignTimeTrend | Simulate and Analyse Bayesian Platform Trial with Time Trend |
| BayesianPower | Sample Size and Power for Comparing Inequality Constrained Hypotheses |
| BayesianReasoning | Plot Positive and Negative Predictive Values for Medical Tests |
| BayesianTools | General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics |
| Bayesiantreg | Bayesian t Regression for Modeling Mean and Scale Parameters |
| bayesianVARs | MCMC Estimation of Bayesian Vectorautoregressions |
| bayesImageS | Bayesian Methods for Image Segmentation using a Potts Model |
| BayesLCA | Bayesian Latent Class Analysis |
| bayesLife | Bayesian Projection of Life Expectancy |
| bayeslm | Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors |
| BayesLN | Bayesian Inference for Log-Normal Data |
| BayesLogit | PolyaGamma Sampling |
| bayeslongitudinal | Adjust Longitudinal Regression Models Using Bayesian Methodology |
| bayesm | Bayesian Inference for Marketing/Micro-Econometrics |
| BayesMallows | Bayesian Preference Learning with the Mallows Rank Model |
| bayesMeanScale | Bayesian Post-Estimation on the Mean Scale |
| bayesmeta | Bayesian Random-Effects Meta-Analysis and Meta-Regression |
| BayesMFSurv | Bayesian Misclassified-Failure Survival Model |
| bayesMig | Bayesian Projection of Migration |
| bayesmix | Bayesian Mixture Models with JAGS |
| BayesMixSurv | Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification |
| bayesmlogit | A Multistate Life Table (MSLT) Methodology Based on Bayesian Approach |
| BayesMortalityPlus | Bayesian Mortality Modelling |
| bayesmove | Non-Parametric Bayesian Analyses of Animal Movement |
| bayesMRM | Bayesian Multivariate Receptor Modeling |
| BayesMultiMode | Bayesian Mode Inference |
| BayesMultMeta | Bayesian Multivariate Meta-Analysis |
| bayesnec | A Bayesian No-Effect- Concentration (NEC) Algorithm |
| BayesNetBP | Bayesian Network Belief Propagation |
| BayesNSGP | Bayesian Analysis of Non-Stationary Gaussian Process Models |
| BayesOrdDesign | Bayesian Group Sequential Design for Ordinal Data |
| BayesPieceHazSelect | Variable Selection in a Hierarchical Bayesian Model for a Hazard Function |
| bayesplay | The Bayes Factor Playground |
| bayesplot | Plotting for Bayesian Models |
| bayespm | Bayesian Statistical Process Monitoring |
| bayesPO | Bayesian Inference for Presence-Only Data |
| bayesPop | Probabilistic Population Projection |
| BayesPostEst | Generate Postestimation Quantities for Bayesian MCMC Estimation |
| BayesPPD | Bayesian Power Prior Design |
| BayesPPDSurv | Bayesian Power Prior Design for Survival Data |
| BayesProject | Fast Projection Direction for Multivariate Changepoint Detection |
| bayesQR | Bayesian Quantile Regression |
| bayesRecon | Probabilistic Reconciliation via Conditioning |
| bayesreg | Bayesian Regression Models with Global-Local Shrinkage Priors |
| Bayesrel | Bayesian Reliability Estimation |
| BayesRep | Bayesian Analysis of Replication Studies |
| BayesRepDesign | Bayesian Design of Replication Studies |
| BayesReversePLLH | Fits the Bayesian Piecewise Linear Log-Hazard Model |
| BayesRGMM | Bayesian Robust Generalized Mixed Models for Longitudinal Data |
| bayesROE | Bayesian Regions of Evidence |
| BayesRS | Bayes Factors for Hierarchical Linear Models with Continuous Predictors |
| bayesrules | Datasets and Supplemental Functions from Bayes Rules! Book |
| bayess | Bayesian Essentials with R |
| BayesS5 | Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5) |
| BayesSampling | Bayes Linear Estimators for Finite Population |
| BayesSenMC | Different Models of Posterior Distributions of Adjusted Odds Ratio |
| BayesSUR | Bayesian Seemingly Unrelated Regression Models in High-Dimensional Settings |
| bayesSurv | Bayesian Survival Regression with Flexible Error and Random Effects Distributions |
| BayesSurvival | Bayesian Survival Analysis for Right Censored Data |
| BayesSurvive | Bayesian Survival Models for High-Dimensional Data |
| bayest | Effect Size Targeted Bayesian Two-Sample t-Tests via Markov Chain Monte Carlo in Gaussian Mixture Models |
| bayestestR | Understand and Describe Bayesian Models and Posterior Distributions |
| bayesTFR | Bayesian Fertility Projection |
| BayesTools | Tools for Bayesian Analyses |
| BayesTree | Bayesian Additive Regression Trees |
| BayesTreePrior | Bayesian Tree Prior Simulation |
| BayesTwin | Bayesian Analysis of Item-Level Twin Data |
| BayesVarSel | Bayes Factors, Model Choice and Variable Selection in Linear Models |
| bayesvl | Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' |
| bayesWatch | Bayesian Change-Point Detection for Process Monitoring with Fault Detection |
| BayesX | R Utilities Accompanying the Software Package BayesX |
| BayesXsrc | Distribution of the 'BayesX' C++ Sources |
| bayesZIB | Bayesian Zero-Inflated Bernoulli Regression Model |
| bayfoxr | Global Bayesian Foraminifera Core Top Calibration |
| baygel | Bayesian Shrinkage Estimators for Precision Matrices in Gaussian Graphical Models |
| BayLum | Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating |
| bayMDS | Bayesian Multidimensional Scaling and Choice of Dimension |
| baymedr | Computation of Bayes Factors for Common Biomedical Designs |
| baystability | Bayesian Stability Analysis of Genotype by Environment Interaction (GEI) |
| BAYSTAR | On Bayesian Analysis of Threshold Autoregressive Models |
| baytrends | Long Term Water Quality Trend Analysis |
| bazar | Miscellaneous Basic Functions |
| BB | Solving and Optimizing Large-Scale Nonlinear Systems |
| bbdetection | Identification of Bull and Bear States of the Market |
| BBEST | Bayesian Estimation of Incoherent Neutron Scattering Backgrounds |
| BBI | Benthic Biotic Indices Calculation from Composition Data |
| bbk | Client for the Deutsche Bundesbank and European Central Bank APIs |
| bbknnR | Perform Batch Balanced KNN in R |
| bbl | Boltzmann Bayes Learner |
| BBmisc | Miscellaneous Helper Functions for B. Bischl |
| bbmix | Bayesian Model for Genotyping using RNA-Seq |
| bbmle | Tools for General Maximum Likelihood Estimation |
| bbnet | Create Simple Predictive Models on Bayesian Belief Networks |
| bbotk | Black-Box Optimization Toolkit |
| bbreg | Bessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data |
| bbw | Blocked Weighted Bootstrap |
| bc3net | Gene Regulatory Network Inference with Bc3net |
| BCA1SG | Block Coordinate Ascent with One-Step Generalized Rosen Algorithm |
| bcaboot | Bias Corrected Bootstrap Confidence Intervals |
| BCBCSF | Bias-Corrected Bayesian Classification with Selected Features |
| bcc | Beta Control Charts |
| BCC1997 | Calculation of Option Prices Based on a Universal Solution |
| BCClong | Bayesian Consensus Clustering for Multiple Longitudinal Features |
| bccp | Bias Correction under Censoring Plan |
| BCDAG | Bayesian Structure and Causal Learning of Gaussian Directed Graphs |
| bcdata | Search and Retrieve Data from the BC Data Catalogue |
| BCDating | Business Cycle Dating and Plotting Tools |
| BcDiag | Diagnostics Plots for Bicluster Data |
| BCEA | Bayesian Cost Effectiveness Analysis |
| BCEE | The Bayesian Causal Effect Estimation Algorithm |
| bcf | Causal Inference using Bayesian Causal Forests |
| bcfrailph | Semiparametric Bivariate Correlated Frailty Models Fit |
| bcfrailphdv | Bivariate Correlated Frailty Models with Varied Variances |
| bcgam | Bayesian Constrained Generalised Linear Models |
| BCgee | Bias-Corrected Estimates for Generalized Linear Models for Dependent Data |
| BCHM | Clinical Trial Calculation Based on BCHM Design |
| Bchron | Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling |
| BClustLonG | A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data |
| bcmaps | Map Layers and Spatial Utilities for British Columbia |
| bcmixed | Mixed Effect Model with the Box-Cox Transformation |
| bcpa | Behavioral Change Point Analysis of Animal Movement |
| bcputility | Wrapper for SQL Server bcp Utility |
| BCRA | Breast Cancer Risk Assessment |
| bcrm | Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials |
| bcROCsurface | Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests |
| bcrypt | 'Blowfish' Key Derivation and Password Hashing |
| BCSub | A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering) |
| BCT | Bayesian Context Trees for Discrete Time Series |
| bcv | Cross-Validation for the SVD (Bi-Cross-Validation) |
| bda | Binned Data Analysis |
| BDAlgo | Bloom Detecting Algorithm |
| bdc | Biodiversity Data Cleaning |
| bdDwC | Darwinizer: Darwin Core (DwC) Field Names Standardization |
| bde | Bounded Density Estimation |
| BDEsize | Efficient Determination of Sample Size in Balanced Design of Experiments |
| BDgraph | Bayesian Structure Learning in Graphical Models using Birth-Death MCMC |
| bdl | Interface and Tools for 'BDL' API |
| bdlim | Bayesian Distributed Lag Interaction Models |
| bdlp | Transparent and Reproducible Artificial Data Generation |
| bdots | Bootstrapped Differences of Time Series |
| BDP2 | Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint |
| bdpar | Big Data Preprocessing Architecture |
| bdpv | Inference and Design for Predictive Values in Diagnostic Tests |
| bdrc | Bayesian Discharge Rating Curves |
| bdribs | Bayesian Detection of Potential Risk Using Inference on Blinded Safety Data |
| bdscale | Remove Weekends and Holidays from ggplot2 Axes |
| bdsmatrix | Routines for Block Diagonal Symmetric Matrices |
| bdsvd | Block Structure Detection Using Singular Vectors |
| BDWreg | Bayesian Inference for Discrete Weibull Regression |
| BE | Bioequivalence Study Data Analysis |
| bea.R | Bureau of Economic Analysis API |
| BEACH | Biometric Exploratory Analysis Creation House |
| beadplexr | Analysis of Multiplex Cytometric Bead Assays |
| beakr | A Minimalist Web Framework for R |
| BEAMR | Bootstrap Evaluation of Association Matrices |
| beanplot | Visualization via Beanplots (Like Boxplot/Stripchart/Violin Plot) |
| beans | Data on Dried Beans |
| beanz | Bayesian Analysis of Heterogeneous Treatment Effect |
| bearishTrader | Trading Strategies for Bearish Outlook |
| beast | Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series |
| beastier | Call 'BEAST2' |
| BeastJar | JAR Dependency for MCMC Using 'BEAST' |
| beastt | Bayesian Evaluation, Analysis, and Simulation Software Tools for Trials |
| beautier | 'BEAUti' from R |
| beaver | Bayesian Model Averaging of Covariate Adjusted Negative-Binomial Dose-Response |
| BED | Biological Entity Dictionary (BED) |
| BEDASSLE | Quantifies Effects of Geo/Eco Distance on Genetic Differentiation |
| BEDMatrix | Extract Genotypes from a PLINK .bed File |
| bedr | Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix' |
| BeeBDC | Occurrence Data Cleaning |
| beeca | Binary Endpoint Estimation with Covariate Adjustment |
| BeeGUTS | General Unified Threshold Model of Survival for Bees using Bayesian Inference |
| beepr | Easily Play Notification Sounds on any Platform |
| beeswarm | The Bee Swarm Plot, an Alternative to Stripchart |
| beezdemand | Behavioral Economic Easy Demand |
| beezdiscounting | Behavioral Economic Easy Discounting |
| befproj | Makes a Local Population Projection |
| behaviorchange | Tools for Behavior Change Researchers and Professionals |
| behavr | Canonical Data Structure for Behavioural Data |
| BEKKs | Multivariate Conditional Volatility Modelling and Forecasting |
| belex | Download Historical Data from the Belgrade Stock Exchange |
| belg | Boltzmann Entropy of a Landscape Gradient |
| BElikelihood | Likelihood Method for Evaluating Bioequivalence |
| bellreg | Count Regression Models Based on the Bell Distribution |
| bench | High Precision Timing of R Expressions |
| benchden | 28 Benchmark Densities from Berlinet/Devroye (1994) |
| Benchmarking | Benchmark and Frontier Analysis Using DEA and SFA |
| benchmarkme | Crowd Sourced System Benchmarks |
| benchmarkmeData | Data Set for the 'benchmarkme' Package |
| benchr | High Precise Measurement of R Expressions Execution Time |
| BEND | Bayesian Estimation of Nonlinear Data (BEND) |
| bender | Bender Client |
| benford | Benford's Analysis on Large Data Sets |
| benford.analysis | Benford Analysis for Data Validation and Forensic Analytics |
| BenfordTests | Statistical Tests for Evaluating Conformity to Benford's Law |
| bennu | Bayesian Estimation of Naloxone Kit Number Under-Reporting |
| bentcableAR | Bent-Cable Regression for Independent Data or Autoregressive Time Series |
| benthos | Marine Benthic Ecosystem Analysis |
| BeQut | Bayesian Estimation for Quantile Regression Mixed Models |
| Bergm | Bayesian Exponential Random Graph Models |
| Bernadette | Bayesian Inference and Model Selection for Stochastic Epidemics |
| berryFunctions | Function Collection Related to Plotting and Hydrology |
| bespatial | Boltzmann Entropy for Spatial Data |
| BeSS | Best Subset Selection in Linear, Logistic and CoxPH Models |
| Bessel | Computations and Approximations for Bessel Functions |
| bestglm | Best Subset GLM and Regression Utilities |
| besthr | Generating Bootstrap Estimation Distributions of HR Data |
| Bestie | Bayesian Estimation of Intervention Effects |
| bestNormalize | Normalizing Transformation Functions |
| BESTree | Branch-Exclusive Splits Trees |
| bestridge | A Comprehensive R Package for Best Subset Selection |
| bestSDP | Burden Estimate of Common Communicable Diseases in Settlements of Displaced Populations |
| BET | Binary Expansion Testing |
| betaBayes | Bayesian Beta Regression |
| BetaBit | Mini Games from Adventures of Beta and Bit |
| betacal | Beta Calibration |
| betaclust | A Family of Beta Mixture Models for Clustering Beta-Valued DNA Methylation Data |
| betaDelta | Confidence Intervals for Standardized Regression Coefficients |
| betafunctions | Functions for Working with Two- And Four-Parameter Beta Probability Distributions and Psychometric Analysis of Classifications |
| betaMC | Monte Carlo for Regression Effect Sizes |
| betaNB | Bootstrap for Regression Effect Sizes |
| betapart | Partitioning Beta Diversity into Turnover and Nestedness Components |
| BetaPASS | Calculate Power and Sample Size with Beta Regression |
| betaper | Taxonomic Uncertainty on Multivariate Analyses of Ecological Data |
| betareg | Beta Regression |
| betaSandwich | Robust Confidence Intervals for Standardized Regression Coefficients |
| betaselectr | Betas-Select in Structural Equation Models and Linear Models |
| betategarch | Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models |
| bethel | Bethel's algorithm |
| BETS | Brazilian Economic Time Series |
| bets.covid19 | The BETS Model for Early Epidemic Data |
| BetterReg | Better Statistics for OLS and Binomial Logistic Regression |
| BeviMed | Bayesian Evaluation of Variant Involvement in Mendelian Disease |
| bexy | Visualize and Parse the Output of 'BeXY' |
| BeyondBenford | Compare the Goodness of Fit of Benford's and Blondeau Da Silva's Digit Distributions to a Given Dataset |
| beyondWhittle | Bayesian Spectral Inference for Time Series |
| bezier | Toolkit for Bezier Curves and Splines |
| bfast | Breaks for Additive Season and Trend |
| bfboinet | Backfill Bayesian Optimal Interval Design Using Efficacy and Toxicity |
| BFF | Bayes Factor Functions |
| BFI | Bayesian Federated Inference |
| bfp | Bayesian Fractional Polynomials |
| BFpack | Flexible Bayes Factor Testing of Scientific Expectations |
| bfpwr | Power and Sample Size Calculations for Bayes Factor Analysis |
| BFS | Get Data from the Swiss Federal Statistical Office |
| bfsl | Best-Fit Straight Line |
| bfsMaps | Plot Maps from Switzerland by Swiss Federal Statistical Office |
| bfw | Bayesian Framework for Computational Modeling |
| BGData | A Suite of Packages for Analysis of Big Genomic Data |
| bgev | Bimodal GEV Distribution with Location Parameter |
| bgeva | Binary Generalized Extreme Value Additive Models |
| BGFD | Bell-G and Complementary Bell-G Family of Distributions |
| BGGE | Bayesian Genomic Linear Models Applied to GE Genome Selection |
| BGGM | Bayesian Gaussian Graphical Models |
| bggum | Bayesian Estimation of Generalized Graded Unfolding Model Parameters |
| BGLR | Bayesian Generalized Linear Regression |
| bgmfiles | Example BGM Files for the Atlantis Ecosystem Model |
| BGmisc | An R Package for Extended Behavior Genetics Analysis |
| bgmm | Gaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling |
| bgms | Bayesian Analysis of Networks of Binary and/or Ordinal Variables |
| BGPhazard | Markov Beta and Gamma Processes for Modeling Hazard Rates |
| bgsmtr | Bayesian Group Sparse Multi-Task Regression |
| bgumbel | Bimodal Gumbel Distribution |
| BGVAR | Bayesian Global Vector Autoregressions |
| bgw | Bunch-Gay-Welsch Statistical Estimation |
| BH | Boost C++ Header Files |
| BHAI | Estimate the Burden of Healthcare-Associated Infections |
| Bhat | General Likelihood Exploration |
| BHH2 | Useful Functions for Box, Hunter and Hunter II |
| bhm | Biomarker Threshold Models |
| bhmbasket | Bayesian Hierarchical Models for Basket Trials |
| BHMSMAfMRI | Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI (fMRI) Data |
| BHSBVAR | Structural Bayesian Vector Autoregression Models |
| BI | Blinding Assessment Indexes for Randomized, Controlled, Clinical Trials |
| BiasCorrector | A GUI to Correct Measurement Bias in DNA Methylation Analyses |
| BiasedUrn | Biased Urn Model Distributions |
| bib2df | Parse a BibTeX File to a Data Frame |
| BiBitR | R Wrapper for Java Implementation of BiBit |
| biblio | Interacting with BibTeX Databases |
| bibliometrix | Comprehensive Science Mapping Analysis |
| bibliometrixData | Bibliometrix Example Datasets |
| biblionetwork | Create Different Types of Bibliometric Networks |
| bibliorefer | Generator of Main Scientific References |
| biblioverlap | Document-Level Matching Between Bibliographic Datasets |
| BibPlots | Plot Functions for Use in Bibliometrics |
| bibs | Bayesian Inference for the Birnbaum-Saunders Distribution |
| bibtex | Bibtex Parser |
| BiCausality | Binary Causality Inference Framework |
| biClassify | Binary Classification Using Extensions of Discriminant Analysis |
| biclust | BiCluster Algorithms |
| biclustermd | Biclustering with Missing Data |
| BICORN | Integrative Inference of De Novo Cis-Regulatory Modules |
| BiDAG | Bayesian Inference for Directed Acyclic Graphs |
| bidask | Efficient Estimation of Bid-Ask Spreads from Open, High, Low, and Close Prices |
| BiDimRegression | Calculates the Bidimensional Regression Between Two 2D Configurations |
| BIEN | Tools for Accessing the Botanical Information and Ecology Network Database |
| BifactorIndicesCalculator | Bifactor Indices Calculator |
| bife | Binary Choice Models with Fixed Effects |
| BIFIEsurvey | Tools for Survey Statistics in Educational Assessment |
| bifurcatingr | Bifurcating Autoregressive Models |
| bigalgebra | 'BLAS' and 'LAPACK' Routines for Native R Matrices and 'big.matrix' Objects |
| biganalytics | Utilities for 'big.matrix' Objects from Package 'bigmemory' |
| bigassertr | Assertion and Message Functions |
| bigBits | Perform Boolean Operations on Large Numbers |
| bigchess | Read, Write, Manipulate, Explore Chess PGN Files and R API to UCI Chess Engines |
| bigD | Flexibly Format Dates and Times to a Given Locale |
| bigdatadist | Distances for Machine Learning and Statistics in the Context of Big Data |
| BIGDAWG | Case-Control Analysis of Multi-Allelic Loci |
| bigDM | Scalable Bayesian Disease Mapping Models for High-Dimensional Data |
| bigergm | Fit, Simulate, and Diagnose Hierarchical Exponential-Family Models for Big Networks |
| bigGP | Distributed Gaussian Process Calculations |
| BIGL | Biochemically Intuitive Generalized Loewe Model |
| biglasso | Extending Lasso Model Fitting to Big Data |
| bigleaf | Physical and Physiological Ecosystem Properties from Eddy Covariance Data |
| biglm | Bounded Memory Linear and Generalized Linear Models |
| biglmm | Bounded Memory Linear and Generalized Linear Models |
| bigMap | Big Data Mapping |
| bigmatch | Making Optimal Matching Size-Scalable Using Optimal Calipers |
| bigmds | Multidimensional Scaling for Big Data |
| bigmemory | Manage Massive Matrices with Shared Memory and Memory-Mapped Files |
| bigmemory.sri | A Shared Resource Interface for Bigmemory Project Packages |
| bignum | Arbitrary-Precision Integer and Floating-Point Mathematics |
| bigparallelr | Easy Parallel Tools |
| bigQF | Quadratic Forms in Large Matrices |
| BigQuic | Big Quadratic Inverse Covariance Estimation |
| bigreadr | Read Large Text Files |
| bigReg | Generalized Linear Models (GLM) for Large Data Sets |
| bigrquery | An Interface to Google's 'BigQuery' 'API' |
| bigrquerystorage | An Interface to Google's 'BigQuery Storage' API |
| bigsimr | Fast Generation of High-Dimensional Random Vectors |
| bigsnpr | Analysis of Massive SNP Arrays |
| bigsparser | Sparse Matrix Format with Data on Disk |
| bigsplines | Smoothing Splines for Large Samples |
| bigstatsr | Statistical Tools for Filebacked Big Matrices |
| bigstep | Stepwise Selection for Large Data Sets |
| bigSurvSGD | Big Survival Analysis Using Stochastic Gradient Descent |
| bigtabulate | Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects |
| bigtcr | Nonparametric Analysis of Bivariate Gap Time with Competing Risks |
| bigtime | Sparse Estimation of Large Time Series Models |
| bigutilsr | Utility Functions for Large-scale Data |
| BigVAR | Dimension Reduction Methods for Multivariate Time Series |
| bikeshare14 | Bay Area Bike Share Trips in 2014 |
| bikm1 | Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets |
| bild | A Package for BInary Longitudinal Data |
| billboard | Contains Data of Billboard Hot 100 Songs |
| billboarder | Create Interactive Chart with the JavaScript 'Billboard' Library |
| bimets | Time Series and Econometric Modeling |
| BimodalIndex | The Bimodality Index |
| binancer | API Client to 'Binance' |
| Binarize | Binarization of One-Dimensional Data |
| BinarybalancedCut | Threshold Cut Point of Probability for a Binary Classifier Model |
| BinaryDosage | Creates, Merges, and Reads Binary Dosage Files |
| BinaryEMVS | Variable Selection for Binary Data Using the EM Algorithm |
| BinaryEPPM | Mean and Scale-Factor Modeling of Under- And Over-Dispersed Binary Data |
| binaryGP | Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response |
| binaryMM | Flexible Marginalized Models for Binary Correlated Outcomes |
| binb | 'binb' is not 'Beamer' |
| BINCOR | Estimate the Correlation Between Two Irregular Time Series |
| binda | Multi-Class Discriminant Analysis using Binary Predictors |
| bindata | Generation of Artificial Binary Data |
| bindr | Parametrized Active Bindings |
| bindrcpp | An 'Rcpp' Interface to Active Bindings |
| binequality | Methods for Analyzing Binned Income Data |
| binford | Binford's Hunter-Gatherer Data |
| binfunest | Estimates Parameters of Functions Driving Binomial Random Variables |
| bingadsR | Get Bing Ads Data via the 'Windsor.ai' API |
| bingat | Binary Graph Analysis Tools |
| binGroup | Evaluation and Experimental Design for Binomial Group Testing |
| binGroup2 | Identification and Estimation using Group Testing |
| BinGSD | Calculate Boundaries and Conditional Power for Single Arm Group Sequential Test with Binary Endpoint |
| binhf | Haar-Fisz Functions for Binomial Data |
| binman | A Binary Download Manager |
| BinMat | Processes Binary Data Obtained from Fragment Analysis (Such as AFLPs, ISSRs, and RFLPs) |
| binMto | Many-to-One Comparisons of Proportions |
| BinNonNor | Data Generation with Binary and Continuous Non-Normal Components |
| BinNor | Simultaneous Generation of Multivariate Binary and Normal Variates |
| binom | Binomial Confidence Intervals for Several Parameterizations |
| binomCI | Confidence Intervals for a Binomial Proportion |
| binomialRF | Binomial Random Forest Feature Selection |
| binomialtrend | Calculates the Statistical Significance of a Trend in a Set of Measurements |
| BinOrdNonNor | Concurrent Generation of Binary, Ordinal and Continuous Data |
| binovisualfields | Depth-Dependent Binocular Visual Fields Simulation |
| binpackr | Fast 1d Bin Packing |
| binr | Cut Numeric Values into Evenly Distributed Groups |
| BinSegBstrap | Piecewise Smooth Regression by Bootstrapped Binary Segmentation |
| binsegRcpp | Efficient Implementation of Binary Segmentation |
| binseqtest | Exact Binary Sequential Designs and Analysis |
| binsmooth | Generate PDFs and CDFs from Binned Data |
| binspp | Bayesian Inference for Neyman-Scott Point Processes |
| binsreg | Binscatter Estimation and Inference |
| binst | Data Preprocessing, Binning for Classification and Regression |
| BINtools | Bayesian BIN (Bias, Information, Noise) Model of Forecasting |
| bio.infer | Predict Environmental Conditions from Biological Observations |
| bio3d | Biological Structure Analysis |
| bioacoustics | Analyse Audio Recordings and Automatically Extract Animal Vocalizations |
| BiObjClass | Classification of Algorithms |
| biobricks | Access Data Dependencies Installed Through 'Biobricks.ai' |
| bioC.logs | BioConductor Package Downloads Stats |
| BioCircos | Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js' |
| bioclim | Bioclimatic Analysis and Classification |
| BiocManager | Access the Bioconductor Project Package Repository |
| biocompute | Create and Manipulate BioCompute Objects |
| BioCro | Modular Crop Growth Simulations |
| Biodem | Biodemography Functions |
| BiodiversityR | Package for Community Ecology and Suitability Analysis |
| biodosetools | An R Shiny Application for Biological Dosimetry |
| BIOdry | Multilevel Modeling of Dendroclimatical Fluctuations |
| biogas | Process Biogas Data and Predict Biogas Production |
| biogeom | Biological Geometries |
| biogram | N-Gram Analysis of Biological Sequences |
| biogrowth | Modelling of Population Growth |
| Bioi | Biological Image Analysis |
| bioimagetools | Tools for Microscopy Imaging |
| bioinactivation | Mathematical Modelling of (Dynamic) Microbial Inactivation |
| BioInsight | Filter and Plot RNA Biotypes |
| biolink | Create Hyperlinks to Biological Databases and Resources |
| biologicalActivityIndices | Biological Activity Indices |
| BioM2 | Biologically Explainable Machine Learning Framework |
| BioMark | Find Biomarkers in Two-Class Discrimination Problems |
| biomartr | Genomic Data Retrieval |
| BIOMASS | Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests |
| biometryassist | Functions to Assist Design and Analysis of Agronomic Experiments |
| biomod2 | Ensemble Platform for Species Distribution Modeling |
| bionetdata | Biological and Chemical Data Networks |
| BioPET | Biomarker Prognostic Enrichment Tool |
| BioPETsurv | Biomarker Prognostic Enrichment Tool for Time-to-Event Trial |
| biopixR | Extracting Insights from Biological Images |
| BioPred | An R Package for Biomarkers Analysis in Precision Medicine |
| BioProbability | Probability in Biostatistics |
| bioRad | Biological Analysis and Visualization of Weather Radar Data |
| bioregion | Comparison of Bioregionalisation Methods |
| BioRssay | Analyze Bioassays and Probit Graphs |
| Bios2cor | From Biological Sequences and Simulations to Correlation Analysis |
| bios2mds | From Biological Sequences to Multidimensional Scaling |
| biosampleR | Biodiversity Index Calculation and Bootstrap Confidence Interval Estimation |
| biosensors.usc | Distributional Data Analysis Techniques for Biosensor Data |
| bioseq | A Toolbox for Manipulating Biological Sequences |
| biosignalEMG | Tools for Electromyogram Signals (EMG) Analysis |
| bioSNR | Bioacoustic Basic Operations with Decibels and the Passive Sonar Equation |
| biospear | Biomarker Selection in Penalized Regression Models |
| biostat3 | Utility Functions, Datasets and Extended Examples for Survival Analysis |
| Biostatistics | Statistics Tutorials for Biologists |
| BioStatR | Initiation à La Statistique Avec R |
| biostats101 | Practical Functions for Biostatistics Beginners |
| BiostatsUHNplus | Nested Data Summary, Adverse Events and REDCap |
| biotic | Calculation of Freshwater Biotic Indices |
| BioTIMEr | Tools to Use and Explore the 'BioTIME' Database |
| biotools | Tools for Biometry and Applied Statistics in Agricultural Science |
| BioVenn | Create Area-Proportional Venn Diagrams from Biological Lists |
| BioVizSeq | Visualizing the Elements Within Bio-Sequences |
| bipartite | Visualising Bipartite Networks and Calculating Some (Ecological) Indices |
| bipartiteD3 | Interactive Bipartite Graphs |
| BipartiteModularityMaximization | Partition Bipartite Network into Non-Overlapping Biclusters by Optimizing Bipartite Modularity |
| bipd | Bayesian Individual Patient Data Meta-Analysis using 'JAGS' |
| bipl5 | Construct Reactive Calibrated Axes Biplots |
| biplotbootGUI | Bootstrap on Classical Biplots and Clustering Disjoint Biplot |
| biplotEZ | EZ-to-Use Biplots |
| BiplotGUI | Interactive Biplots in R |
| birankr | Ranking Nodes in Bipartite and Weighted Networks |
| birdie | Bayesian Instrumental Regression for Disparity Estimation |
| birdring | Methods to Analyse Ring Re-Encounter Data |
| birdscanR | Migration Traffic Rate Calculation Package for 'Birdscan MR1' Radars |
| birk | MA Birk's Functions |
| birtr | The R Package for "The Basics of Item Response Theory Using R" |
| biscale | Tools and Palettes for Bivariate Thematic Mapping |
| BISdata | Download Data from the Bank for International Settlements (BIS) |
| bisectr | Tools to find bad commits with git bisect |
| BiSEp | Toolkit to Identify Candidate Synthetic Lethality |
| bispdep | Statistical Tools for Bivariate Spatial Dependence Analysis |
| bisque | Approximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models |
| BisqueRNA | Decomposition of Bulk Expression with Single-Cell Sequencing |
| BisRNA | Analysis of RNA Cytosine-5 Methylation |
| bistablehistory | Cumulative History Analysis for Bistable Perception Time Series |
| bit | Classes and Methods for Fast Memory-Efficient Boolean Selections |
| bit64 | A S3 Class for Vectors of 64bit Integers |
| bitmexr | R Client for BitMEX |
| bitops | Bitwise Operations |
| BiTrinA | Binarization and Trinarization of One-Dimensional Data |
| bittermelon | Bitmap Tools |
| Bivariate.Pareto | Bivariate Pareto Models |
| bivariatemaps | Creates Bivariate Maps |
| BivGeo | Basu-Dhar Bivariate Geometric Distribution |
| bivgeom | Roy's Bivariate Geometric Distribution |
| bivpois | Bivariate Poisson Distribution |
| BivRec | Bivariate Alternating Recurrent Event Data Analysis |
| BivRegBLS | Tolerance Interval and EIV Regression - Method Comparison Studies |
| bivrp | Bivariate Residual Plots with Simulation Polygons |
| BivUnifBin | Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data |
| biwavelet | Conduct Univariate and Bivariate Wavelet Analyses |
| biwt | Compute the Biweight Mean Vector and Covariance & Correlation Matrice |
| bizdays | Business Days Calculations and Utilities |
| bizicount | Bivariate Zero-Inflated Count Models Using Copulas |
| bkmr | Bayesian Kernel Machine Regression |
| bkmrhat | Parallel Chain Tools for Bayesian Kernel Machine Regression |
| BKTR | Bayesian Kernelized Tensor Regression |
| BLA | Boundary Line Analysis |
| blackbox | Black Box Optimization and Exploration of Parameter Space |
| blackmarbler | Black Marble Data and Statistics |
| blaise | Read and Write FWF Files in the 'Blaise' Format |
| BlakerCI | Blaker's Binomial and Poisson Confidence Limits |
| BlandAltmanLeh | Plots (Slightly Extended) Bland-Altman Plots |
| blandr | Bland-Altman Method Comparison |
| blapsr | Bayesian Inference with Laplace Approximations and P-Splines |
| blaster | Native R Implementation of an Efficient BLAST-Like Algorithm |
| blastula | Easily Send HTML Email Messages |
| blatent | Bayesian Latent Variable Models |
| blatr | Send Emails Using 'Blat' for Windows |
| blavaan | Bayesian Latent Variable Analysis |
| BLCOP | Black-Litterman and Copula Opinion Pooling Frameworks |
| blender | Analyze biotic homogenization of landscapes |
| Blendstat | Joint Analysis of Experiments with Mixtures and Random Effects |
| blindrecalc | Blinded Sample Size Recalculation |
| blindreview | Enables Blind Review of Database |
| blink | Record Linkage for Empirically Motivated Priors |
| bliss | Bayesian Functional Linear Regression with Sparse Step Functions |
| blm | Binomial Linear Regression |
| blme | Bayesian Linear Mixed-Effects Models |
| blmeco | Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan" |
| BLModel | Black-Litterman Posterior Distribution |
| blob | A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS') |
| blockcluster | Co-Clustering Package for Binary, Categorical, Contingency and Continuous Data-Sets |
| BlockCov | Estimation of Large Block Covariance Matrices |
| blockCV | Spatial and Environmental Blocking for K-Fold and LOO Cross-Validation |
| blockForest | Block Forests: Random Forests for Blocks of Clinical and Omics Covariate Data |
| blocklength | Select an Optimal Block-Length to Bootstrap Dependent Data (Block Bootstrap) |
| blockmatrix | blockmatrix: Tools to solve algebraic systems with partitioned matrices |
| BlockMissingData | Integrating Multi-Source Block-Wise Missing Data in Model Selection |
| blockmodeling | Generalized and Classical Blockmodeling of Valued Networks |
| BlockmodelingGUI | GUI for the Generalised Blockmodeling of Valued Networks |
| blockmodels | Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm |
| blockrand | Randomization for Block Random Clinical Trials |
| blocksdesign | Nested and Crossed Block Designs for Factorial and Unstructured Treatment Sets |
| blocs | Estimate and Visualize Voting Blocs' Partisan Contributions |
| blogdown | Create Blogs and Websites with R Markdown |
| BLOQ | Impute and Analyze Data with BLOQ Observations |
| blorr | Tools for Developing Binary Logistic Regression Models |
| BLPestimatoR | Performs a BLP Demand Estimation |
| BLR | Bayesian Linear Regression |
| blrm | Dose Escalation Design in Phase I Oncology Trial Using Bayesian Logistic Regression Modeling |
| BLRPM | Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model |
| BLRShiny | Interactive Document for Working with Binary Logistic Regression Analysis |
| BLRShiny2 | Interactive Document for Working with Binary Logistic Regression Analysis |
| blsBandit | Data Viewer for Bureau of Labor Statistics Data |
| blscrapeR | An API Wrapper for the United States Bureau of Labor Statistics |
| BLSM | Bayesian Latent Space Model |
| blsR | Make Requests from the Bureau of Labor Statistics API |
| bltm | Bayesian Latent Threshold Modeling |
| bluebike | Blue Bike Comprehensive Data |
| BlythStillCasellaCI | Blyth-Still-Casella Exact Binomial Confidence Intervals |
| BMA | Bayesian Model Averaging |
| bmabasket | Bayesian Model Averaging for Basket Trials |
| BMAmevt | Multivariate Extremes: Bayesian Estimation of the Spectral Measure |
| bmass | Bayesian Multivariate Analysis of Summary Statistics |
| BMconcor | CONCOR for Structural- And Regular-Equivalence Blockmodeling |
| bmem | Mediation Analysis with Missing Data Using Bootstrap |
| bmemLavaan | Mediation Analysis with Missing Data and Non-Normal Data |
| bmet | Bayesian Multigroup Equivalence Testing |
| bmgarch | Bayesian Multivariate GARCH Models |
| bmggum | Bayesian Multidimensional Generalized Graded Unfolding Model |
| BMisc | Miscellaneous Functions for Panel Data, Quantiles, and Printing Results |
| bmixture | Bayesian Estimation for Finite Mixture of Distributions |
| bmlm | Bayesian Multilevel Mediation |
| bmm | Easy and Accessible Bayesian Measurement Models Using 'brms' |
| bmp | Read Windows Bitmap (BMP) Images |
| BMRBr | 'BMRB' File Downloader |
| BMRMM | An Implementation of the Bayesian Markov (Renewal) Mixed Models |
| BMS | Bayesian Model Averaging Library |
| bmscstan | Bayesian Multilevel Single Case Models using 'Stan' |
| bmstdr | Bayesian Modeling of Spatio-Temporal Data with R |
| BMT | The BMT Distribution |
| BMTAR | Bayesian Approach for MTAR Models with Missing Data |
| bnclassify | Learning Discrete Bayesian Network Classifiers from Data |
| bndesr | Access Data from the Brazilian Development Bank (BNDES) |
| bndovb | Bounding Omitted Variable Bias Using Auxiliary Data |
| bnlearn | Bayesian Network Structure Learning, Parameter Learning and Inference |
| bnma | Bayesian Network Meta-Analysis using 'JAGS' |
| bnmonitor | An Implementation of Sensitivity Analysis in Bayesian Networks |
| bnnSurvival | Bagged k-Nearest Neighbors Survival Prediction |
| bnpa | Bayesian Networks & Path Analysis |
| BNPdensity | Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures |
| BNPmix | Bayesian Nonparametric Mixture Models |
| bnpsd | Simulate Genotypes from the BN-PSD Admixture Model |
| BNPTSclust | A Bayesian Nonparametric Algorithm for Time Series Clustering |
| bnRep | A Repository of Bayesian Networks from the Academic Literature |
| BNrich | Pathway Enrichment Analysis Based on Bayesian Network |
| BNSL | Bayesian Network Structure Learning |
| BNSP | Bayesian Non- And Semi-Parametric Model Fitting |
| bnstruct | Bayesian Network Structure Learning from Data with Missing Values |
| bnviewer | Bayesian Networks Interactive Visualization and Explainable Artificial Intelligence |
| boa | Bayesian Output Analysis Program (BOA) for MCMC |
| BoardGames | Board Games and Tools for Building Board Games |
| bodenmiller | Profiling of Peripheral Blood Mononuclear Cells using CyTOF |
| Bodi | Boosting Diversity in Regression Ensembles |
| bodsr | Call the Bus Open Data Service ('BODS') API Through R |
| bodycomp | Percent Body Fat Values Using Anthropometric Prediction Equations |
| bodycompref | Reference Values for CT-Assessed Body Composition |
| boggy | Real-Time PCR Data Sets by Boggy et al. (2010) |
| boilerpipeR | Interface to the Boilerpipe Java Library |
| BOIN | Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials |
| boinet | Conduct Simulation Study of Bayesian Optimal Interval Design with BOIN-ET Family |
| boiwsa | Seasonal Adjustment of Weekly Data |
| BOJ | Interface to Bank of Japan Statistics |
| bolasso | Model Consistent Lasso Estimation Through the Bootstrap |
| bolsec | Bolivian Securities |
| Bolstad | Functions for Elementary Bayesian Inference |
| Bolstad2 | Bolstad Functions |
| BoltzMM | Boltzmann Machines with MM Algorithms |
| bondAnalyst | Methods for Fixed-Income Valuation, Risk and Return |
| BondValuation | Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions |
| BoneProfileR | Tools to Study Bone Compactness |
| BonEV | An Improved Multiple Testing Procedure for Controlling False Discovery Rates |
| bonn | Access INKAR Database |
| bonsai | Model Wrappers for Tree-Based Models |
| bonsaiforest | Shrinkage Based Forest Plots |
| boodist | Some Distributions from the 'Boost' Library and More |
| bookdown | Authoring Books and Technical Documents with R Markdown |
| BoolFilter | Optimal Estimation of Partially Observed Boolean Dynamical Systems |
| BoolNet | Construction, Simulation and Analysis of Boolean Networks |
| Boom | Bayesian Object Oriented Modeling |
| boomer | Debugging Tools to Inspect the Intermediate Steps of a Call |
| BoomSpikeSlab | MCMC for Spike and Slab Regression |
| boostingDEA | A Boosting Approach to Data Envelopment Analysis |
| BoostMLR | Boosting for Multivariate Longitudinal Responses |
| boostmtree | Boosted Multivariate Trees for Longitudinal Data |
| boostrq | Boosting Regression Quantiles |
| boot | Bootstrap Functions (Originally by Angelo Canty for S) |
| boot.heterogeneity | A Bootstrap-Based Heterogeneity Test for Meta-Analysis |
| boot.pval | Bootstrap p-Values |
| bootcluster | Bootstrapping Estimates of Clustering Stability |
| bootComb | Combine Parameter Estimates via Parametric Bootstrap |
| bootCT | Bootstrapping the ARDL Tests for Cointegration |
| bootES | Bootstrap Confidence Intervals on Effect Sizes |
| bootf2 | Simulation and Comparison of Dissolution Profiles |
| bootGOF | Bootstrap Based Goodness-of-Fit Tests |
| bootImpute | Bootstrap Inference for Multiple Imputation |
| bootLR | Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests |
| BootMRMR | Bootstrap-MRMR Technique for Informative Gene Selection |
| bootnet | Bootstrap Methods for Various Network Estimation Routines |
| bootPLS | Bootstrap Hyperparameter Selection for PLS Models and Extensions |
| BootPR | Bootstrap Prediction Intervals and Bias-Corrected Forecasting |
| bootruin | A Bootstrap Test for the Probability of Ruin in the Classical Risk Process |
| bootStepAIC | Bootstrap stepAIC |
| bootstrap | Functions for the Book "An Introduction to the Bootstrap" |
| bootstrapFP | Bootstrap Algorithms for Finite Population Inference |
| BootstrapQTL | Bootstrap cis-QTL Method that Corrects for the Winner's Curse |
| bootsurv | Bootstrap Methods for Complete Survey Data |
| bootSVD | Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data |
| bootUR | Bootstrap Unit Root Tests |
| bootwar | Nonparametric Bootstrap Test with Pooled Resampling Card Game |
| BootWPTOS | Test Stationarity using Bootstrap Wavelet Packet Tests |
| Boptbd | Bayesian Optimal Block Designs |
| bor | Transforming Behavioral Observation Records into Data Matrices |
| boral | Bayesian Ordination and Regression AnaLysis |
| borrowr | Estimate Causal Effects with Borrowing Between Data Sources |
| Boruta | Wrapper Algorithm for All Relevant Feature Selection |
| BosonSampling | Classical Boson Sampling |
| BoSSA | A Bunch of Structure and Sequence Analysis |
| bossR | Biomarker Optimal Segmentation System |
| BOSSreg | Best Orthogonalized Subset Selection (BOSS) |
| botor | 'AWS Python SDK' ('boto3') for R |
| BoundaryStats | Boundary Overlap Statistics |
| BoundEdgeworth | Bound on the Error of the First-Order Edgeworth Expansion |
| boundingbox | Create a Bounding Box in an Image |
| boussinesq | Analytic Solutions for (Ground-Water) Boussinesq Equation |
| boutliers | Outlier Detection and Influence Diagnostics for Meta-Analysis |
| BoutrosLab.plotting.general | Functions to Create Publication-Quality Plots |
| box | Write Reusable, Composable and Modular R Code |
| box.linters | Linters for 'box' Modules |
| box.lsp | Provides 'box' Compatibility for 'languageserver' |
| boxcoxmix | Box-Cox-Type Transformations for Linear and Logistic Models with Random Effects |
| boxfilter | Filter Noisy Data |
| boxly | Interactive Box Plot |
| boxplotcluster | Clustering Method Based on Boxplot Statistics |
| boxplotdbl | Double Box Plot for Two-Axes Correlation |
| boxr | Interface for the 'Box.com API' |
| bp | Blood Pressure Analysis in R |
| bpa | Basic Pattern Analysis |
| bpAcc | Blood Pressure Device Accuracy Evaluation: Statistical Considerations |
| bpbounds | Nonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions |
| bpca | Biplot of Multivariate Data Based on Principal Components Analysis |
| bpcp | Beta Product Confidence Procedure for Right Censored Data |
| bpDir | Boxplots for Directional Data |
| bpgmm | Bayesian Model Selection Approach for Parsimonious Gaussian Mixture Models |
| bplsr | Bayesian partial least squares regression |
| BPM | Bayesian Purity Model to Estimate Tumor Purity |
| bpmnR | Support for BPMN (Business Process Management Notation) Models |
| bpmnVisualizationR | Visualize Process Execution Data on 'BPMN' Diagrams |
| bpnreg | Bayesian Projected Normal Regression Models for Circular Data |
| bpp | Computations Around Bayesian Predictive Power |
| bpr | Fitting Bayesian Poisson Regression |
| BPrinStratTTE | Causal Effects in Principal Strata Defined by Antidrug Antibodies |
| bqror | Bayesian Quantile Regression for Ordinal Models |
| bqtl | Bayesian QTL Mapping Toolkit |
| bRacatus | A Method to Estimate the Accuracy and Biogeographical Status of Georeferenced Biological Data |
| BRACE | Bias Reduction Through Analysis of Competing Events (BRACE) |
| bracer | Brace Expansions |
| BRACoD.R | BRACoD: Bayesian Regression Analysis of Compositional Data |
| brada | Bayesian Response-Adaptive Design Analysis |
| BradleyTerry2 | Bradley-Terry Models |
| braggR | Calculate the Revealed Aggregator of Probability Predictions |
| braidReports | Visualize Combined Action Response Surfaces and Report BRAID Analyses |
| braidrm | Fitting Combined Action with the BRAID Response Surface Model |
| braids | The Braid Groups |
| BrailleR | Improved Access for Blind Users |
| BrainCon | Inference the Partial Correlations Based on Time Series Data |
| brainGraph | Graph Theory Analysis of Brain MRI Data |
| brainKCCA | Region-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis |
| brainR | Helper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging |
| BranchGLM | Efficient Best Subset Selection for GLMs via Branch and Bound Algorithms |
| Branching | Simulation and Estimation for Branching Processes |
| brandwatchR | 'Brandwatch' API to R |
| brant | Test for Parallel Regression Assumption |
| braQCA | Bootstrapped Robustness Assessment for Qualitative Comparative Analysis |
| brassica | 1970s BASIC Interpreter |
| bratteli | Deal with Bratteli Graphs |
| bravo | Bayesian Screening and Variable Selection |
| BrazilCrime | Accesses Brazilian Public Security Data from SINESP Since 2015 |
| BrazilMet | Download and Processing of Automatic Weather Stations (AWS) Data of INMET-Brazil |
| BRBVS | Variable Selection and Ranking in Copula Survival Models Affected by General Censoring Scheme |
| BRcal | Boldness-Recalibration of Binary Events |
| brclimr | Fetch Zonal Statistics of Weather Indicators for Brazilian Municipalities |
| BRDT | Binomial Reliability Demonstration Tests |
| brea | Bayesian Recurrent Events Analysis |
| bread | Analyze Big Files Without Loading Them in Memory |
| BREADR | Estimates Degrees of Relatedness (Up to the Second Degree) for Extreme Low-Coverage Data |
| breakaway | Species Richness Estimation and Modeling |
| breakDown | Model Agnostic Explainers for Individual Predictions |
| breakfast | Methods for Fast Multiple Change-Point/Break-Point Detection and Estimation |
| breakpoint | An R Package for Multiple Break-Point Detection via the Cross-Entropy Method |
| BreakPoints | Identify Breakpoints in Series of Data |
| breathtestcore | Core Functions to Read and Fit 13c Time Series from Breath Tests |
| breathteststan | Stan-Based Fit to Gastric Emptying Curves |
| bReeze | Functions for Wind Resource Assessment |
| BRETIGEA | Brain Cell Type Specific Gene Expression Analysis |
| brew | Templating Framework for Report Generation |
| brglm | Bias Reduction in Binomial-Response Generalized Linear Models |
| brglm2 | Bias Reduction in Generalized Linear Models |
| brickset | Interface with the Brickset API for Getting Data About LEGO Sets |
| brickster | R Toolkit for 'Databricks' |
| bridgedist | An Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003) |
| bridger | Bridge Hand Generator with Criteria Selector |
| bridger2 | Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data |
| bridgesampling | Bridge Sampling for Marginal Likelihoods and Bayes Factors |
| brif | A Tree and Forest Tool for Classification and Regression |
| briKmeans | Package for Brik, Fabrik and Fdebrik Algorithms to Initialise Kmeans |
| BRINDA | Computation of BRINDA Adjusted Micronutrient Biomarkers for Inflammation |
| brinton | A Graphical EDA Tool |
| brio | Basic R Input Output |
| briqr | Interface to the 'Briq' API |
| BRISC | Fast Inference for Large Spatial Datasets using BRISC |
| brisk | Bayesian Benefit Risk Analysis |
| BRL | Beta Record Linkage |
| brlrmr | Bias Reduction with Missing Binary Response |
| brm | Binary Regression Model |
| brms | Bayesian Regression Models using 'Stan' |
| brms.mmrm | Bayesian MMRMs using 'brms' |
| brmsmargins | Bayesian Marginal Effects for 'brms' Models |
| brnn | Bayesian Regularization for Feed-Forward Neural Networks |
| Brobdingnag | Very Large Numbers in R |
| BrokenAdaptiveRidge | Broken Adaptive Ridge Regression with Cyclops |
| brokenstick | Broken Stick Model for Irregular Longitudinal Data |
| brolgar | Browse Over Longitudinal Data Graphically and Analytically in R |
| broman | Karl Broman's R Code |
| broom | Convert Statistical Objects into Tidy Tibbles |
| broom.helpers | Helpers for Model Coefficients Tibbles |
| broom.mixed | Tidying Methods for Mixed Models |
| brotli | A Compression Format Optimized for the Web |
| BrownDog | Brown Dog R Interface |
| brpop | Brazilian Population Estimatives |
| Brq | Bayesian Analysis of Quantile Regression Models |
| brsim | Brainerd-Robinson Similarity Coefficient Matrix |
| bruceR | Broadly Useful Convenient and Efficient R Functions |
| BRugs | Interface to the 'OpenBUGS' MCMC Software |
| brulee | High-Level Modeling Functions with 'torch' |
| brunnermunzel | (Permuted) Brunner-Munzel Test |
| BRVM | Retrieve Historical Data of Companies Listed on the 'BRVM' Stock Exchange |
| brxx | Bayesian Test Reliability Estimation |
| bs4cards | Generate Bootstrap Cards |
| bs4Dash | A 'Bootstrap 4' Version of 'shinydashboard' |
| BSagri | Safety Assessment in Agricultural Field Trials |
| bsam | Bayesian State-Space Models for Animal Movement |
| bsamGP | Bayesian Spectral Analysis Models using Gaussian Process Priors |
| bscui | Build SVG Custom User Interface |
| BSDA | Basic Statistics and Data Analysis |
| bsearchtools | Binary Search Tools |
| bsgof | Birnbaum-Saunders Goodness-of-Fit Test |
| BSGW | Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression |
| bshazard | Nonparametric Smoothing of the Hazard Function |
| bSi | Modeling and Computing Biogenic Silica ('bSi') from Inland and Pelagic Sediments |
| bsicons | Easily Work with 'Bootstrap' Icons |
| bSims | Agent-Based Bird Point Count Simulator |
| bsitar | Bayesian Super Imposition by Translation and Rotation Growth Curve Analysis |
| bskyr | Interact with 'Bluesky' Social |
| BSL | Bayesian Synthetic Likelihood |
| bslib | Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown' |
| BsMD | Bayes Screening and Model Discrimination |
| bsnsing | Build Decision Trees with Optimal Multivariate Splits |
| BSPADATA | Bayesian Proposal to Fit Spatial Econometric Models |
| BSPBSS | Bayesian Spatial Blind Source Separation |
| bspcov | Bayesian Sparse Estimation of a Covariance Matrix |
| bspec | Bayesian Spectral Inference |
| bspline | B-Spline Interpolation and Regression |
| bsplinePsd | Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors |
| bsplus | Adds Functionality to the R Markdown + Shiny Bootstrap Framework |
| bspm | Bridge to System Package Manager |
| bspmma | Bayesian Semiparametric Models for Meta-Analysis |
| bsreg | Bayesian Spatial Regression Models |
| BSS | Brownian Semistationary Processes |
| BSSasymp | Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates |
| bssm | Bayesian Inference of Non-Linear and Non-Gaussian State Space Models |
| bssn | Birnbaum-Saunders Model |
| BSSoverSpace | Blind Source Separation for Multivariate Spatial Data using Eigen Analysis |
| BSSprep | Whitening Data as Preparation for Blind Source Separation |
| bst | Gradient Boosting |
| bsTools | Create HTML Content with Bootstrap 5 Classes and Layouts |
| bstrl | Bayesian Streaming Record Linkage |
| bsts | Bayesian Structural Time Series |
| BSTZINB | Association Among Disease Counts and Socio-Environmental Factors |
| bsub | Submitter and Monitor of the 'LSF Cluster' |
| bsvars | Bayesian Estimation of Structural Vector Autoregressive Models |
| bsvarSIGNs | Bayesian SVARs with Sign, Zero, and Narrative Restrictions |
| BSW | Fitting a Log-Binomial Model using the Bekhit-Schöpe-Wagenpfeil (BSW) Algorithm |
| bsynth | Bayesian Synthetic Control |
| BT | (Adaptive) Boosting Trees Algorithm |
| btb | Beyond the Border - Kernel Density Estimation for Urban Geography |
| BTdecayLasso | Bradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso |
| btergm | Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood |
| BTLLasso | Modelling Heterogeneity in Paired Comparison Data |
| BTM | Biterm Topic Models for Short Text |
| BTSPAS | Bayesian Time-Stratified Population Analysis |
| BTSR | Bounded Time Series Regression |
| BTtest | Estimate the Number of Factors in Large Nonstationary Datasets |
| BTTL | Bradley-Terry Transfer Learning |
| BTYD | Implementing BTYD Models with the Log Sum Exp Patch |
| BTYDplus | Probabilistic Models for Assessing and Predicting your Customer Base |
| bubbleHeatmap | Produces 'bubbleHeatmap' Plots for Visualising Metabolomics Data |
| bubblyr | Beautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds |
| BUCSS | Bias and Uncertainty Corrected Sample Size |
| Buddle | A Deep Learning for Statistical Classification and Regression Analysis with Random Effects |
| buildmer | Stepwise Elimination and Term Reordering for Mixed-Effects Regression |
| buildr | Organize & Run Build Scripts Comfortably |
| BuildSys | System for Building and Debugging C/C++ Dynamic Libraries |
| bujar | Buckley-James Regression for Survival Data with High-Dimensional Covariates |
| bulkAnalyseR | Interactive Shiny App for Bulk Sequencing Data |
| bulkQC | Quality Control and Outlier Identification in Bulk for Multicenter Trials |
| bulkreadr | The Ultimate Tool for Reading Data in Bulk |
| bulletcp | Automatic Groove Identification via Bayesian Changepoint Detection |
| bulletr | Algorithms for Matching Bullet Lands |
| bullishTrader | Bullish Trading Strategies Through Graphs |
| bullseye | Visualising Multiple Pairwise Variable Correlations and Other Scores |
| bullwhipgame | Bullwhip Effect Demo in Shiny |
| bumbl | Tools for Modeling Bumblebee Colony Growth and Decline |
| bumblebee | Quantify Disease Transmission Within and Between Population Groups |
| bunching | Estimate Bunching |
| bunchr | Analyze Bunching in a Kink or Notch Setting |
| bundesbank | Download Data from Bundesbank |
| bundesligR | All Final Tables of the Bundesliga |
| bundle | Serialize Model Objects with a Consistent Interface |
| bupaR | Business Process Analysis in R |
| bupaverse | Easily Install and Load the 'bupaverse' |
| burgle | 'Burgle': Stealing the Necessary Parts of Model Objects |
| burnr | Forest Fire History Analysis |
| bursa | R Wrapper for Bursa Municipality Open Data Portal |
| BurStFin | Burns Statistics Financial |
| BurStMisc | Burns Statistics Miscellaneous |
| bursts | Markov Model for Bursty Behavior in Streams |
| busdater | Standard Date Calculations for Business |
| BusinessDuration | Calculates Business Duration Between Two Dates |
| businessPlanR | Simple Modelling Tools for Business Plans |
| butcher | Model Butcher |
| butterflyOptions | Trading Butterfly Options Strategies |
| BuyseTest | Generalized Pairwise Comparisons |
| Bvalue | B-Value and Empirical Equivalence Bound |
| BVAR | Hierarchical Bayesian Vector Autoregression |
| bvarsv | Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters |
| bvartools | Bayesian Inference of Vector Autoregressive and Error Correction Models |
| BVARverse | Tidy Bayesian Vector Autoregression |
| bvhar | Bayesian Vector Heterogeneous Autoregressive Modeling |
| bvls | The Stark-Parker algorithm for bounded-variable least squares |
| bvpa | Bivariate Pareto Distribution |
| BVSNLP | Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors |
| bwd | Backward Procedure for Change-Point Detection |
| bWGR | Bayesian Whole-Genome Regression |
| BWGS | BreedWheat Genomic Selection Pipeline |
| bwimage | Describe Image Patterns in Natural Structures |
| BwQuant | Bandwidth Selectors for Local Linear Quantile Regression |
| bws | Bayesian Weighted Sums |
| BWStest | Baumgartner Weiss Schindler Test of Equal Distributions |
| bwsTools | Tools for Case 1 Best-Worst Scaling (MaxDiff) Designs |
| bysykkel | Get City Bike Data from Norway |
| bytescircle | Statistics About Bytes Contained in a File as a Circle Plot |
| bzinb | Bivariate Zero-Inflated Negative Binomial Model Estimator |
| c060 | Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models |
| C19dNUTS | Dataset of Regional COVID-19 Deaths per 100,000 Pop (NUTS) |
| c212 | Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes) |
| c2c | Compare Two Classifications or Clustering Solutions of Varying Structure |
| c2z | A Reference Manager |
| c3 | 'C3.js' Chart Library |
| c3net | Inferring Large-Scale Gene Networks with C3NET |
| C443 | See a Forest for the Trees |
| C50 | C5.0 Decision Trees and Rule-Based Models |
| ca | Simple, Multiple and Joint Correspondence Analysis |
| CA3variants | Three-Way Correspondence Analysis Variants |
| cabinets | Project Specific Workspace Organization Templates |
| cabootcrs | Bootstrap Confidence Regions for Simple and Multiple Correspondence Analysis |
| cacc | Conjunctive Analysis of Case Configurations |
| cache | Cache and Retrieve Computation Results |
| cachem | Cache R Objects with Automatic Pruning |
| CACIMAR | Cross-Species Analysis of Cell Identities, Markers and Regulations |
| cacIRT | Classification Accuracy and Consistency under Item Response Theory |
| CaDENCE | Conditional Density Estimation Network Construction and Evaluation |
| CADF | Customer Analytics Data Formatting |
| CADFtest | A Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests |
| caesar | Encrypts and Decrypts Strings |
| CAESAR.Suite | CAESAR: a Cross-Technology and Cross-Resolution Framework for Spatial Omics Annotation |
| caffsim | Simulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model |
| CAGR | Compound Annual Growth Rate |
| cAIC4 | Conditional Akaike Information Criterion for 'lme4' and 'nlme' |
| CAinterprTools | Graphical Aid in Correspondence Analysis Interpretation and Significance Testings |
| Cairo | R Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output |
| CAISEr | Comparison of Algorithms with Iterative Sample Size Estimation |
| calACS | Calculations for All Common Subsequences |
| CALANGO | Comparative Analysis with Annotation-Based Genomic Components |
| CalcThemAll.PRM | Calculate Pesticide Risk Metric (PRM) Values from Multiple Pesticides...Calc Them All |
| Calculator.LR.FNs | Calculator for LR Fuzzy Numbers |
| calculus | High Dimensional Numerical and Symbolic Calculus |
| calcUnique | Simple Wrapper for Computationally Expensive Functions |
| calendar | Create, Read, Write, and Work with 'iCalendar' Files, Calendars and Scheduling Data |
| calendR | Ready to Print Monthly and Yearly Calendars Made with 'ggplot2' |
| calendRio | 'calendR' Fork with Additional Features (Backwards Compatible) |
| CALF | Coarse Approximation Linear Function |
| CALIBERrfimpute | Multiple Imputation Using MICE and Random Forest |
| calibmsm | Calibration Plots for the Transition Probabilities from Multistate Models |
| calibrar | Automated Parameter Estimation for Complex Models |
| calibrate | Calibration of Scatterplot and Biplot Axes |
| calibrateBinary | Calibration for Computer Experiments with Binary Responses |
| CalibrateSSB | Weighting and Estimation for Panel Data with Non-Response |
| calibrationband | Calibration Bands |
| CalibrationCurves | Calibration Performance |
| calibrator | Bayesian Calibration of Complex Computer Codes |
| CalibratR | Mapping ML Scores to Calibrated Predictions |
| calidad | Assesses the Quality of Estimates Made by Complex Sample Designs |
| callback | Computes Statistics from Discrimination Experimental Data |
| callme | Easily Compile and Call Inline C Functions |
| callr | Call R from R |
| callsync | Recording Synchronisation, Call Detection and Assignment, Audio Analysis |
| calmate | Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation |
| calmr | Canonical Associative Learning Models and their Representations |
| calpassapi | R Interface to Access CalPASS API |
| CalSim | The Calibration Simplex |
| camcorder | Record Your Plot History |
| CamelUp | 'CamelUp' Board Game as a Teaching Aid for Introductory Statistics |
| camerondata | Datasets from "Microeconometrics: Methods and Applications" by Cameron and Trivedi |
| CAMML | Cell-Typing using Variance Adjusted Mahalanobis Distances with Multi-Labeling |
| campaignmanageR | Connect to Campaign Manager via the 'Windsor.ai' API |
| campfin | Wrangle Campaign Finance Data |
| campsis | Generic PK/PD Simulation Platform CAMPSIS |
| campsismod | Generic Implementation of a PK/PD Model |
| camsRad | Client for CAMS Radiation Service |
| camtrapdp | Read and Manipulate Camera Trap Data Packages |
| camtrapR | Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses |
| canadamaps | Maps of the Political and Administrative Divisions of Canada |
| canadianmaps | Effortlessly Create Stunning Canadian Maps |
| canaper | Categorical Analysis of Neo- And Paleo-Endemism |
| cancensus | Access, Retrieve, and Work with Canadian Census Data and Geography |
| CancerEvolutionVisualization | Publication Quality Phylogenetic Tree Plots |
| cancerGI | Analyses of Cancer Gene Interaction |
| CancerGram | Prediction of Anticancer Peptides |
| cancerR | Classification of Cancer Using Administrative Data |
| cancerscreening | Streamline Access to Cancer Screening Data |
| candisc | Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis |
| Canek | Batch Correction of Single Cell Transcriptome Data |
| Canopy | Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing |
| canprot | Chemical Analysis of Proteins |
| cansim | Accessing Statistics Canada Data Table and Vectors |
| CANSIM2R | Directly Extracts Complete CANSIM Data Tables |
| canvasXpress | Visualization Package for CanvasXpress in R |
| canvasXpress.data | Datasets for the 'canvasXpress' Package |
| cape | Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice |
| caper | Comparative Analyses of Phylogenetics and Evolution in R |
| capesData | Data on Scholarships in CAPES International Mobility Programs |
| capitalR | Capital Budgeting Analysis, Annuity Loan Calculations and Amortization Schedules |
| capl | Compute and Visualize CAPL-2 Scores and Interpretations |
| caplot | Correspondence Analysis with Geometric Frequency Interpretation |
| capm | Companion Animal Population Management |
| capn | Capital Asset Pricing for Nature |
| CaPO4Sim | A Virtual Patient Simulator in the Context of Calcium and Phosphate Homeostasis |
| captr | Client for the Captricity API |
| capushe | CAlibrating Penalities Using Slope HEuristics |
| car | Companion to Applied Regression |
| caracas | Computer Algebra |
| caRamel | Automatic Calibration by Evolutionary Multi Objective Algorithm |
| carat | Covariate-Adaptive Randomization for Clinical Trials |
| CARBayes | Spatial Generalised Linear Mixed Models for Areal Unit Data |
| CARBayesdata | Data Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages |
| CARBayesST | Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data |
| carbonate | Interact with 'carbon.js' |
| carbondate | Calibration and Summarisation of Radiocarbon Dates |
| carbonr | Calculate Carbon-Equivalent Emissions |
| carcass | Estimation of the Number of Fatalities from Carcass Searches |
| card | Cardiovascular Applications in Research Data |
| card.pro | Lightweight Modern & Responsive Card Component for 'shiny' |
| carData | Companion to Applied Regression Data Sets |
| cardidates | Identification of Cardinal Dates in Ecological Time Series |
| cardinalR | Collection of Data Structures |
| cards | Analysis Results Data |
| cardx | Extra Analysis Results Data Utilities |
| care | High-Dimensional Regression and CAR Score Variable Selection |
| care4cmodel | Carbon-Related Assessment of Silvicultural Concepts |
| caRecall | Government of Canada Vehicle Recalls Database API Wrapper |
| CareDensity | Calculate the Care Density or Fragmented Care Density Given a Patient-Sharing Network |
| careless | Procedures for Computing Indices of Careless Responding |
| caresid | Correspondence Analysis Plot and Associations Visualisation |
| caret | Classification and Regression Training |
| caretEnsemble | Ensembles of Caret Models |
| caretForecast | Conformal Time Series Forecasting Using State of Art Machine Learning Algorithms |
| carfima | Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data |
| cargo | Develop R Packages using Rust |
| caribou | Estimation of Caribou Abundance Based on Radio Telemetry Data |
| CarletonStats | Functions for Statistics Classes at Carleton College |
| Carlson | Carlson Elliptic Integrals and Incomplete Elliptic Integrals |
| CARM | Covariate-Adjusted Adaptive Randomization via Mahalanobis-Distance |
| CARME | CAR-MM Modelling in Stan |
| CARMS | Continuous Time Markov Rate Modeling for Reliability Analysis |
| caROC | Continuous Biomarker Evaluation with Adjustment of Covariates |
| caroline | A Collection of Database, Data Structure, Visualization, and Utility Functions for R |
| carpenter | Build Common Tables of Summary Statistics for Reports |
| carrier | Isolate Functions for Remote Execution |
| CARRoT | Predicting Categorical and Continuous Outcomes Using One in Ten Rule |
| carSurv | Correlation-Adjusted Regression Survival (CARS) Scores |
| cartograflow | Filtering Matrix for Flow Mapping |
| cartogram | Create Cartograms with R |
| cartogramR | Continuous Cartogram |
| cartographer | Turn Place Names into Map Data |
| cartographr | Crafting Print-Ready Maps and Layered Visualizations |
| cartography | Thematic Cartography |
| casabourse | Casablanca Stock Exchange Data |
| Cascade | Selection, Reverse-Engineering and Prediction in Cascade Networks |
| CascadeData | Experimental Data of Cascade Experiments in Genomics |
| cascadeSelect | A Cascade Select Input for 'Shiny' |
| cascadess | A Style Pronoun for 'htmltools' Tags |
| CASCORE | Covariate Assisted Spectral Clustering on Ratios of Eigenvectors |
| cascsim | Casualty Actuarial Society Individual Claim Simulator |
| casebase | Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression |
| CaseBasedReasoning | Case Based Reasoning |
| CaseCohortCoxSurvival | Case-Cohort Cox Survival Inference |
| caseMatch | Identify Similar Cases for Qualitative Case Studies |
| cases | Stratified Evaluation of Subgroup Classification Accuracy |
| casino | Play Casino Games |
| CASMAP | Detection of Statistically Significant Combinations of SNPs in Association Mapping |
| CASMI | 'CASMI'-Based Functions |
| cassandRa | Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks |
| cassowaryr | Compute Scagnostics on Pairs of Numeric Variables in a Data Set |
| CAST | 'caret' Applications for Spatial-Temporal Models |
| castor | Efficient Phylogenetics on Large Trees |
| cat | Analysis and Imputation of Categorical-Variable Datasets with Missing Values |
| cat2cat | Handling an Inconsistently Coded Categorical Variable in a Longitudinal Dataset |
| cata | Analysis of Check-All-that-Apply (CATA) Data |
| catalog | Access the 'Spark Catalog' API via 'sparklyr' |
| CatastRo | Interface to the API 'Sede Electronica Del Catastro' |
| catch | Covariate-Adjusted Tensor Classification in High-Dimensions |
| catcont | Test, Identify, Select and Mutate Categorical or Continuous Values |
| catdap | Categorical Data Analysis Program Package |
| catdata | Categorical Data |
| CatDataAnalysis | Datasets for Categorical Data Analysis by Agresti |
| CatDyn | Fishery Stock Assessment by Catch Dynamics Models |
| categoryEncodings | Category Variable Encodings |
| CatEncoders | Encoders for Categorical Variables |
| catfun | Categorical Data Analysis |
| cati | Community Assembly by Traits: Individuals and Beyond |
| catIrt | Simulate IRT-Based Computerized Adaptive Tests |
| catlearn | Formal Psychological Models of Categorization and Learning |
| catmap | Case-Control and TDT Meta-Analysis Package |
| catmaply | Heatmap for Categorical Data using 'plotly' |
| caTools | Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc |
| CatPredi | Optimal Categorisation of Continuous Variables in Prediction Models |
| catR | Generation of IRT Response Patterns under Computerized Adaptive Testing |
| CatReg | Solution Paths for Linear and Logistic Regression Models with Categorical Predictors, with SCOPE Penalty |
| catregs | Post-Estimation Functions for Generalized Linear Mixed Models |
| cats | Cohort Platform Trial Simulation |
| catseyes | Create Catseye Plots Illustrating the Normal Distribution of the Means |
| catsim | Binary and Categorical Image Similarity Index |
| catSurv | Computerized Adaptive Testing for Survey Research |
| CATT | The Cochran-Armitage Trend Test |
| CATTexact | Computation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test |
| CauchyCP | Powerful Test for Survival Data under Non-Proportional Hazards |
| cauchypca | Robust Principal Component Analysis Using the Cauchy Distribution |
| cauphy | Trait Evolution on Phylogenies Using the Cauchy Process |
| causact | Fast, Easy, and Visual Bayesian Inference |
| causal.decomp | Causal Decomposition Analysis |
| causalBatch | Causal Batch Effects |
| causalCmprsk | Nonparametric and Cox-Based Estimation of Average Treatment Effects in Competing Risks |
| causaldata | Example Data Sets for Causal Inference Textbooks |
| causalDisco | Tools for Causal Discovery on Observational Data |
| causaldrf | Estimating Causal Dose Response Functions |
| causaleffect | Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models |
| CausalGAM | Estimation of Causal Effects with Generalized Additive Models |
| CausalGPS | Matching on Generalized Propensity Scores with Continuous Exposures |
| causalHyperGraph | Drawing Causal Hypergraphs |
| CausalImpact | Inferring Causal Effects using Bayesian Structural Time-Series Models |
| CausalMBSTS | MBSTS Models for Causal Inference and Forecasting |
| CausalMetaR | Causally Interpretable Meta-Analysis |
| CausalModels | Causal Inference Modeling for Estimation of Causal Effects |
| causaloptim | An Interface to Specify Causal Graphs and Compute Bounds on Causal Effects |
| causalOT | Optimal Transport Weights for Causal Inference |
| causalPAF | Causal Effect for Population Attributable Fractions (PAF) |
| CausalQueries | Make, Update, and Query Binary Causal Models |
| causalsens | Selection Bias Approach to Sensitivity Analysis for Causal Effects |
| causalSLSE | Semiparametric Least Squares Inference for Causal Effects |
| causalweight | Estimation Methods for Causal Inference Based on Inverse Probability Weighting |
| CausCor | Calculate Correlations and Estimate Causality |
| CautiousLearning | Control Charts with Guaranteed In-Control Performance and Cautious Parameters Learning |
| CAvariants | Correspondence Analysis Variants |
| caviarpd | Cluster Analysis via Random Partition Distributions |
| CB2 | CRISPR Pooled Screen Analysis using Beta-Binomial Test |
| cba | Clustering for Business Analytics |
| cbanalysis | Coffee Break Descriptive Analysis |
| cbass | Classification – Bayesian Adaptive Smoothing Splines |
| cbbinom | Continuous Analog of a Beta-Binomial Distribution |
| CBCgrps | Compare Baseline Characteristics Between Groups |
| cbcTools | Choice-Based Conjoint Experiment Design Generation and Power Evaluation in R |
| cbinom | Continuous Analog of a Binomial Distribution |
| cbioportalR | Browse and Query Clinical and Genomic Data from cBioPortal |
| cbl | Causal Discovery under a Confounder Blanket |
| CBnetworkMA | Contrast-Based Bayesian Network Meta Analysis |
| CBPE | Correlation-Based Penalized Estimators |
| CBPS | Covariate Balancing Propensity Score |
| cbq | Conditional Binary Quantile Models |
| CBRT | CBRT Data on Turkish Economy |
| cbsodataR | Statistics Netherlands (CBS) Open Data API Client |
| CBSr | Fits Cubic Bezier Spline Functions to Intertemporal and Risky Choice Data |
| CBT | Confidence Bound Target Algorithm |
| CC | Control Charts |
| CCA | Canonical Correlation Analysis |
| CCAMLRGIS | Antarctic Spatial Data Manipulation |
| ccaPP | (Robust) Canonical Correlation Analysis via Projection Pursuit |
| cccd | Class Cover Catch Digraphs |
| cccm | Crossed Classification Credibility Model |
| cccp | Cone Constrained Convex Problems |
| cccrm | Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures |
| CCd | The Cauchy-Cacoullos (Discrete Cauchy) Distribution |
| ccda | Combined Cluster and Discriminant Analysis |
| ccdR | Utilities for Interacting with the 'CTX' APIs |
| cchs | Cox Model for Case-Cohort Data with Stratified Subcohort-Selection |
| cchsflow | Transforming and Harmonizing CCHS Variables |
| ccid | Cross-Covariance Isolate Detect: a New Change-Point Method for Estimating Dynamic Functional Connectivity |
| cclust | Convex Clustering Methods and Clustering Indexes |
| CCM | Correlation Classification Method |
| ccmEstimator | Comparative Causal Mediation Estimation |
| ccml | Consensus Clustering for Different Sample Coverage Data |
| ccmm | Compositional Mediation Model |
| CCMMR | Minimization of the Convex Clustering Loss Function |
| ccmReportR | Wraps 'CCM' with Utility Functions |
| ccoptimalmatch | Implementation of Case-Control Optimal Matching |
| ccostr | Estimation of Mean Costs in Censored Data |
| CCP | Significance Tests for Canonical Correlation Analysis (CCA) |
| ccpsyc | Methods for Cross-Cultural Psychology |
| ccRemover | Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data |
| ccrs | Correct and Cluster Response Style Biased Data |
| ccrtm | Coupled Chain Radiative Transfer Models |
| CCSRfind | Convert ICD-10 Codes to CCSR Codes |
| ccss | Cluster Circular Systematic Sampling |
| ccTensor | CUR/CX Tensor Decomposition |
| cctest | Canonical Correlations and Tests of Independence |
| cctools | Tools for the Continuous Convolution Trick in Nonparametric Estimation |
| CCTpack | Consensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications |
| CCWeights | Perform Weighted Linear Regression for Calibration Curve |
| cd | CD Data for Entity Resolution |
| cdata | Fluid Data Transformations |
| CDatanet | Econometrics of Network Data |
| cdcatR | Cognitive Diagnostic Computerized Adaptive Testing |
| CDCPLACES | Access the 'CDC PLACES' API |
| cdcsis | Conditional Distance Correlation Based Feature Screening and Conditional Independence Inference |
| cder | Interface to the California Data Exchange Center (CDEC) |
| cdfquantreg | Quantile Regression for Random Variables on the Unit Interval |
| CDFt | Downscaling and Bias Correction via Non-Parametric CDF-Transform |
| cdgd | Causal Decomposition of Group Disparities |
| CDGHMM | Hidden Markov Models for Multivariate Panel Data |
| cdlei | Cause-Deleted Life Expectancy Improvement Procedure |
| cdlTools | Tools to Download and Work with USDA Cropscape Data |
| CDM | Cognitive Diagnosis Modeling |
| CDMConnector | Connect to an OMOP Common Data Model |
| cdmTools | Useful Tools for Cognitive Diagnosis Modeling |
| cdom | R Functions to Model CDOM Spectra |
| cdparcoord | Top Frequency-Based Parallel Coordinates |
| cdrcR | Load 'CDRC' Data |
| cds | Constrained Dual Scaling for Detecting Response Styles |
| CDsampling | 'CDsampling': Constraint Sampling in Paid Research Studies |
| CDSE | 'Copernicus Data Space Ecosystem' API Wrapper |
| CDSS | Course-Dependent Skill Structures |
| CDVI | Cuddy-Della Valle Index for Capturing the Instability in Time Series Data |
| CDVineCopulaConditional | Sampling from Conditional C- and D-Vine Copulas |
| ceas | Cellular Energetics Analysis Software |
| CEC | Cross-Entropy Clustering |
| CEDA | CRISPR Screen and Gene Expression Differential Analysis |
| CEEMDANML | CEEMDAN Decomposition Based Hybrid Machine Learning Models |
| ceg | Chain Event Graph |
| CEGO | Combinatorial Efficient Global Optimization |
| celestial | Collection of Common Astronomical Conversion Routines and Functions |
| cellKey | Consistent Perturbation of Statistical Frequency- And Magnitude Tables |
| cellOrigins | Finds RNASeq Source Tissues Using In Situ Hybridisation Data |
| cellpypes | Cell Type Pipes for Single-Cell RNA Sequencing Data |
| cellranger | Translate Spreadsheet Cell Ranges to Rows and Columns |
| celltrackR | Motion Trajectory Analysis |
| cellVolumeDist | Functions to Fit Cell Volume Distributions and Thereby Estimate Cell Growth Rates and Division Times |
| cellWise | Analyzing Data with Cellwise Outliers |
| cem | Coarsened Exact Matching |
| cemco | Fit 'CemCO' Algorithm |
| CenBAR | Broken Adaptive Ridge AFT Model with Censored Data |
| cencrne | Consistent Estimation of the Number of Communities via Regularized Network Embedding |
| cenGAM | Censored Regression with Smooth Terms |
| cenROC | Estimating Time-Dependent ROC Curve and AUC for Censored Data |
| censable | Making Census Data More Usable |
| censCov | Linear Regression with a Randomly Censored Covariate |
| CensMFM | Finite Mixture of Multivariate Censored/Missing Data |
| censo2017 | Base de Datos de Facil Acceso del Censo 2017 de Chile (2017 Chilean Census Easy Access Database) |
| censobr | Download Data from Brazil's Population Census |
| censorcopula | Estimate Parameter of Bivariate Copula |
| censored | 'parsnip' Engines for Survival Models |
| censReg | Censored Regression (Tobit) Models |
| CensSpatial | Censored Spatial Models |
| Census2016 | Data from the Australian Census 2016 |
| censusapi | Retrieve Data from the Census APIs |
| censusr | Collect Data from the Census API |
| centerline | Extract Centerline from Closed Polygons |
| centiserve | Find Graph Centrality Indices |
| centr | Weighted and Unweighted Spatial Centers |
| centrifugeR | Non-Trivial Balance of Centrifuge Rotors |
| CEOdata | Datasets of the CEO (Centre d'Estudis d'Opinio) for Opinion Polls in Catalonia |
| CEoptim | Cross-Entropy R Package for Optimization |
| CePa | Centrality-Based Pathway Enrichment |
| cepiigeodist | CEPII's GeoDist Datasets |
| cepp | Context Driven Exploratory Projection Pursuit |
| cepR | Busca CEPs Brasileiros |
| cepreader | Read 'CEP' and Legacy 'CANOCO' Files |
| cepumd | Calculate Consumer Expenditure Survey (CE) Annual Estimates |
| cequre | Censored Quantile Regression & Monotonicity-Respecting Restoring |
| ceramic | Download Online Imagery Tiles |
| cereal | Serialize 'vctrs' Objects to 'JSON' |
| CERFIT | Causal Effect Random Forest of Interaction Tress |
| CerioliOutlierDetection | Outlier Detection Using the Iterated RMCD Method of Cerioli (2010) |
| CeRNASeek | Identification and Analysis of ceRNA Regulation |
| ceRtainty | Certainty Equivalent |
| Certara.NLME8 | Utilities for Certara's Nonlinear Mixed-Effects Modeling Engine |
| Certara.R | Easily Install Pharmacometric Packages and Shiny Applications Developed by Certara |
| Certara.VPCResults | Generate Visual Predictive Checks (VPC) Using 'shiny' |
| ceser | Cluster Estimated Standard Errors |
| cesR | Access the Canadian Election Study Datasets |
| cetcolor | CET Perceptually Uniform Colour Maps |
| ceterisParibus | Ceteris Paribus Profiles |
| cfa | Configural Frequency Analysis (CFA) |
| CFAcoop | Colony Formation Assay: Taking into Account Cellular Cooperation |
| CFC | Cause-Specific Framework for Competing-Risk Analysis |
| cfda | Categorical Functional Data Analysis |
| cfdecomp | Counterfactual Decomposition: MC Integration of the G-Formula |
| CFF | Simple Similarity for User-Based Collaborative Filtering Systems |
| cffdrs | Canadian Forest Fire Danger Rating System |
| cffr | Generate Citation File Format ('cff') Metadata for R Packages |
| cfid | Identification of Counterfactual Queries in Causal Models |
| CFilt | Recommendation by Collaborative Filtering |
| cfma | Causal Functional Mediation Analysis |
| cfmortality | Cystic Fibrosis Survival Prediction Model Based on Stanojevic Model |
| CFO | CFO-Type Designs in Phase I/II Clinical Trials |
| cforward | Forward Selection using Concordance/C-Index |
| cfr | Estimate Disease Severity and Case Ascertainment |
| cft | Climate Futures Toolbox |
| CFtime | Using CF-Compliant Calendars with Climate Projection Data |
| cg | Compare Groups, Analytically and Graphically |
| cgaim | Constrained Groupwise Additive Index Models |
| cgal4h | 'CGAL' Version 4 C++ Header Files |
| cgam | Constrained Generalized Additive Model |
| cgAUC | Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it |
| CGE | Computing General Equilibrium |
| CGGP | Composite Grid Gaussian Processes |
| cglasso | Conditional Graphical LASSO for Gaussian Graphical Models with Censored and Missing Values |
| cglm | Fits Conditional Generalized Linear Models |
| cgmanalysis | Clean and Analyze Continuous Glucose Monitor Data |
| CGManalyzer | Continuous Glucose Monitoring Data Analyzer |
| cgmquantify | Analyzing Glucose and Glucose Variability |
| CGNM | Cluster Gauss-Newton Method |
| CGP | Composite Gaussian Process Models |
| CGPfunctions | Powell Miscellaneous Functions for Teaching and Learning Statistics |
| CGR | Compound Growth Rate for Capturing the Growth Rate Over the Period |
| cgwtools | Miscellaneous Tools |
| ch | About some Small Functions |
| chainbinomial | Chain Binomial Models for Analysis of Infectious Disease Data |
| ChainLadder | Statistical Methods and Models for Claims Reserving in General Insurance |
| chameleon | Automatic Colors for Multi-Dimensional Data |
| chandwich | Chandler-Bate Sandwich Loglikelihood Adjustment |
| changepoint | Methods for Changepoint Detection |
| changepoint.geo | Geometrically Inspired Multivariate Changepoint Detection |
| changepoint.influence | Package to Calculate the Influence of the Data on a Changepoint Segmentation |
| changepoint.np | Methods for Nonparametric Changepoint Detection |
| changepoints | A Collection of Change-Point Detection Methods |
| changepointsVar | Change-Points Detections for Changes in Variance |
| ChangePointTaylor | Identify Changes in Mean |
| ChangepointTesting | Change Point Estimation for Clustered Signals |
| changepointTests | Change Point Tests for Joint Distributions and Copulas |
| changer | Change R Package Name |
| changeS | S-Curve Fit for Changepoint Analysis |
| ChannelAttribution | Markov Model for Online Multi-Channel Attribution |
| ChannelAttributionApp | Shiny Web Application for the Multichannel Attribution Problem |
| chantrics | Loglikelihood Adjustments for Econometric Models |
| Chaos01 | 0-1 Test for Chaos |
| ChaosGame | Chaos Game |
| charcuterie | Handle Strings as Vectors of Characters |
| charlatan | Make Fake Data |
| charlesschwabapi | Wrapper Functions Around 'Charles Schwab Individual Trader API' |
| chartql | Simplified Language for Plots and Charts |
| chatAI4R | Chat-Based Interactive Artificial Intelligence for R |
| chatgpt | Interface to 'ChatGPT' from R |
| chattr | Interact with Large Language Models in 'RStudio' |
| cheapr | Simple Functions to Save Time and Memory |
| cheatsheet | Download R Cheat Sheets Locally |
| checkarg | Check the Basic Validity of a (Function) Argument |
| CheckDigit | Calculate and Verify Check Digits |
| checkdown | Check-Fields and Check-Boxes for 'rmarkdown' |
| checked | Systematically Run R CMD Checks |
| checker | Checks 'R' Configuration Set Up Correctly Before Class |
| checkglobals | Static Analysis of R-Code Dependencies |
| checkhelper | Deal with Check Outputs |
| checkLuhn | Checks if a Number is Valid Using the Luhn Algorithm |
| checkmate | Fast and Versatile Argument Checks |
| checkpoint | Install Packages from Snapshots on the Checkpoint Server for Reproducibility |
| checkthat | Intuitive Unit Testing Tools for Data Manipulation |
| cheddar | Analysis and Visualisation of Ecological Communities |
| cheem | Interactively Explore Local Explanations with the Radial Tour |
| cheese | Tools for Working with Data During Statistical Analysis |
| chem.databases | Collection of 3 Chemical Databases from Public Sources |
| chem16S | Chemical Metrics for Microbial Communities |
| chemCal | Calibration Functions for Analytical Chemistry |
| chemdeg | Analysis of Chemical Degradation Kinetic Data |
| CHEMIST | Causal Inference with High-Dimensional Error-Prone Covariates and Misclassified Treatments |
| chemodiv | Analysing Chemodiversity of Phytochemical Data |
| chemometrics | Multivariate Statistical Analysis in Chemometrics |
| ChemoSpec | Exploratory Chemometrics for Spectroscopy |
| ChemoSpec2D | Exploratory Chemometrics for 2D Spectroscopy |
| ChemoSpecUtils | Functions Supporting Packages ChemoSpec and ChemoSpec2D |
| ChernoffDist | Chernoff's Distribution |
| cherry | Multiple Testing Methods for Exploratory Research |
| cherryblossom | Cherry Blossom Run Race Results |
| chess | Read, Write, Create and Explore Chess Games |
| chessboard | Create Network Connections Based on Chess Moves |
| ChessGmooG | FIDE Chess Players Ratings for 2015 and 2020 |
| chest | Change-in-Estimate Approach to Assess Confounding Effects |
| ChestVolume | Estimate the Chest Volume with Markers Data |
| chevron | Standard TLGs for Clinical Trials Reporting |
| CHFF | Closest History Flow Field Forecasting for Bivariate Time Series |
| chi | The Chi Distribution |
| chicane | Capture Hi-C Analysis Engine |
| childdevdata | Child Development Data |
| childesr | Accessing the 'CHILDES' Database |
| childfree | Access and Harmonize Childfree Demographic Data |
| childsds | Data and Methods Around Reference Values in Pediatrics |
| chilemapas | Mapas de las Divisiones Politicas y Administrativas de Chile (Maps of the Political and Administrative Divisions of Chile) |
| ChillModels | Processing Chill and Heat Models for Temperate Fruit Trees |
| chillR | Statistical Methods for Phenology Analysis in Temperate Fruit Trees |
| chinese.misc | Miscellaneous Tools for Chinese Text Mining and More |
| ChineseNames | Chinese Name Database 1930-2008 |
| chipPCR | Toolkit of Helper Functions to Pre-Process Amplification Data |
| chirps | API Client for CHIRPS and CHIRTS |
| chisq.posthoc.test | A Post Hoc Analysis for Pearson's Chi-Squared Test for Count Data |
| chisquare | Chi-Square and G-Square Test of Independence, Power and Residual Analysis, Measures of Categorical Association |
| chk | Check User-Supplied Function Arguments |
| chkptstanr | Checkpoint MCMC Sampling with 'Stan' |
| chlorpromazineR | Convert Antipsychotic Doses to Chlorpromazine Equivalents |
| CHMM | Coupled Hidden Markov Models |
| CHNCapitalStock | Compute Chinese Capital Stocks |
| chngpt | Estimation and Hypothesis Testing for Threshold Regression |
| CHNOSZ | Thermodynamic Calculations and Diagrams for Geochemistry |
| choiceDes | Design Functions for Choice Studies |
| ChoiceModelR | Choice Modeling in R |
| CHOIRBM | Plots the CHOIR Body Map |
| cholera | Amend, Augment and Aid Analysis of John Snow's Cholera Map |
| CholWishart | Cholesky Decomposition of the Wishart Distribution |
| choosepc | Choose the Number of Principal Components via Recistruction Error |
| choplump | Permutation Test for Some Positive and Many Zero Responses |
| chopthin | The Chopthin Resampler |
| ChoR | Chordalysis R Package |
| chords | Estimation in Respondent Driven Samples |
| choroplethr | Simplify the Creation of Choropleth Maps in R |
| choroplethrAdmin1 | Contains an Administrative-Level-1 Map of the World |
| choroplethrMaps | Contains Maps Used by the 'choroplethr' Package |
| chouca | A Stochastic Cellular Automaton Engine |
| christmas | Generation of Different Animated Christmas Cards |
| chromConverter | Chromatographic File Converter |
| chromer | Interface to Chromosome Counts Database API |
| chromoMap | Interactive Genomic Visualization of Biological Data |
| chromote | Headless Chrome Web Browser Interface |
| chromseq | Split Chromosome 'Fasta' File |
| chron | Chronological Objects which Can Handle Dates and Times |
| chronicle | Grammar for Creating R Markdown Reports |
| chronicler | Add Logging to Functions |
| chronochrt | Creating Chronological Charts |
| chronosphere | Evolving Earth System Variables |
| chunked | Chunkwise Text-File Processing for 'dplyr' |
| chunkhooks | Chunk Hooks for 'R Markdown' |
| chunkR | Read Tables in Chunks |
| chyper | Functions for Conditional Hypergeometric Distributions |
| cia | Learn and Apply Directed Acyclic Graphs for Causal Inference |
| CIAAWconsensus | Isotope Ratio Meta-Analysis |
| CIARA | Cluster Independent Algorithm for Rare Cell Types Identification |
| CICA | Clusterwise Independent Component Analysis |
| ciCalibrate | Calibration of Confidence Intervals to Support Intervals |
| ciccr | Causal Inference in Case-Control and Case-Population Studies |
| cicerone | Provide Tours of 'Shiny' Applications |
| CICI | Causal Inference with Continuous (Multiple Time Point) Interventions |
| CIEE | Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations |
| cif | Cointegrated ICU Forecasting |
| CIfinder | Estimate the Confidence Intervals for Predictive Values |
| cifti | Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files |
| ciftiTools | Tools for Reading, Writing, Viewing and Manipulating CIFTI Files |
| CIM | Compositional Impact of Migration |
| cimir | Interface to the CIMIS Web API |
| CIMPLE | Analysis of Longitudinal Electronic Health Record (EHR) Data with Possibly Informative Observational Time |
| CIMTx | Causal Inference for Multiple Treatments with a Binary Outcome |
| cinaR | A Computational Pipeline for Bulk 'ATAC-Seq' Profiles |
| cinaRgenesets | Ready-to-Use Curated Gene Sets for 'cinaR' |
| CINE | Classification International Normalized of Education |
| CINID | Curculionidae INstar IDentification |
| CINmetrics | Calculate Chromosomal Instability Metrics |
| CINNA | Deciphering Central Informative Nodes in Network Analysis |
| cinterpolate | Interpolation From C |
| CIPerm | Computationally-Efficient Confidence Intervals for Mean Shift from Permutation Methods |
| cipheR | Encryption and Decryption with Text Ciphers |
| CIplot | Functions to Plot Confidence Interval |
| CIpostSelect | Confidence Interval Post-Selection of Variable |
| cir | Centered Isotonic Regression and Dose-Response Utilities |
| circacompare | Analyses of Circadian Data |
| CirceR | Construct Cohort Inclusion and Restriction Criteria Expressions |
| circhelp | Circular Analyses Helper Functions |
| circle | R Client Package for Circle CI |
| CirclesIntersections | Algorithm for Computation of the Intersection Areas of N Circles |
| circlesplot | Visualize Proportions with Circles in a Plot |
| circletyper | Curve Text Elements in 'Shiny' Using 'CircleType.js' |
| circlize | Circular Visualization |
| circlus | Clustering and Simulation of Spherical Cauchy and PKBD Models |
| CircMLE | Maximum Likelihood Analysis of Circular Data |
| CircNNTSR | Statistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models |
| CircNNTSRmult | Multivariate Circular Data using MNNTS Models |
| CircOutlier | Detection of Outliers in Circular-Circular Regression |
| CircSpaceTime | Spatial and Spatio-Temporal Bayesian Model for Circular Data |
| CircStats | Circular Statistics, from "Topics in Circular Statistics" (2001) |
| circular | Circular Statistics |
| CircularDDM | Circular Drift-Diffusion Model |
| circularEV | Extreme Value Analysis for Circular Data |
| CircularSilhouette | Fast Silhouette on Circular or Linear Data Clusters |
| circumplex | Analysis and Visualization of Circular Data |
| cirls | Constrained Iteratively Reweighted Least Squares |
| cIRT | Choice Item Response Theory |
| CIS.DGLM | Covariates, Interaction, and Selection for DGLM |
| cit | Causal Inference Test |
| CITAN | CITation ANalysis Toolpack |
| citation | Software Citation Tools |
| citationchaser | Perform Forward and Backwards Chasing in Evidence Syntheses |
| citecorp | Client for the Open Citations Corpus |
| cities | Clinical Trials with Intercurrent Events Simulator |
| CITMIC | Estimation of Cell Infiltration Based on Cell Crosstalk |
| citmre | Colombian Index Tool Market Rate Exchange |
| cito | Building and Training Neural Networks |
| ciTools | Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models |
| citrus | Customer Intelligence Tool for Rapid Understandable Segmentation |
| ciu | Contextual Importance and Utility |
| ciuupi | Confidence Intervals Utilizing Uncertain Prior Information |
| ciuupi2 | Kabaila and Giri (2009) Confidence Interval |
| civ | Categorical Instrumental Variables |
| civis | R Client for the 'Civis Platform API' |
| ciw | Watch the CRAN Incoming Directories |
| CJAMP | Copula-Based Joint Analysis of Multiple Phenotypes |
| cjar | R Client for 'Customer Journey Analytics' ('CJA') API |
| cjbart | Heterogeneous Effects Analysis of Conjoint Experiments |
| CJIVE | Canonical Joint and Individual Variation Explained (CJIVE) |
| cjoint | AMCE Estimator for Conjoint Experiments |
| ckanr | Client for the Comprehensive Knowledge Archive Network ('CKAN') API |
| CKAT | Composite Kernel Association Test for Pharmacogenetics Studies |
| CKLRT | Composite Kernel Machine Regression Based on Likelihood Ratio Test |
| Ckmeans.1d.dp | Optimal, Fast, and Reproducible Univariate Clustering |
| CKMRpop | Forward-in-Time Simulation and Tallying of Pairwise Relationships |
| CLA | Critical Line Algorithm in Pure R |
| Claddis | Measuring Morphological Diversity and Evolutionary Tempo |
| cladoRcpp | C++ Implementations of Phylogenetic Cladogenesis Calculations |
| ClaimsProblems | Analysis of Conflicting Claims |
| clam | Classical Age-Depth Modelling of Cores from Deposits |
| ClamR | Time Series Modeling for Climate Change Proxies |
| clap | Detecting Class Overlapping Regions in Multidimensional Data |
| clarabel | Interior Point Conic Optimization Solver |
| clarifai | Access to Clarifai API |
| clarify | Simulation-Based Inference for Regression Models |
| clarkeTest | Distribution-Free Tests of Non-Nested Models |
| class | Functions for Classification |
| ClassComparison | Classes and Methods for "Class Comparison" Problems on Microarrays |
| ClassDiscovery | Classes and Methods for "Class Discovery" with Microarrays or Proteomics |
| classGraph | Construct Graphs of S4 Class Hierarchies |
| classicaltest | Classical Test Theory (CTT) Analysis |
| classifierplots | Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots |
| classifly | Explore Classification Models in High Dimensions |
| classInt | Choose Univariate Class Intervals |
| classmap | Visualizing Classification Results |
| CLAST | Exact Confidence Limits after a Sequential Trial |
| cld2 | Google's Compact Language Detector 2 |
| cld3 | Google's Compact Language Detector 3 |
| clda | Convolution-Based Linear Discriminant Analysis |
| clean | Fast and Easy Data Cleaning |
| CleanBSequences | Curing of Biological Sequences |
| cleancall | C Resource Cleanup via Exit Handlers |
| cleandata | To Inspect and Manipulate Data; and to Keep Track of This Process |
| cleanepi | Clean and Standardize Epidemiological Data |
| cleaner | Fast and Easy Data Cleaning |
| cleangeo | Cleaning Geometries from Spatial Objects |
| CleaningValidation | Cleaning Validation Functions for Pharmaceutical Cleaning Process |
| cleanNLP | A Tidy Data Model for Natural Language Processing |
| cleanr | Helps You to Code Cleaner |
| cleanrmd | Clean Class-Less 'R Markdown' HTML Documents |
| cleanTS | Testbench for Univariate Time Series Cleaning |
| cleaR | Clean the R Console and Environment |
| clespr | Composite Likelihood Estimation for Spatial Data |
| clevr | Clustering and Link Prediction Evaluation in R |
| clhs | Conditioned Latin Hypercube Sampling |
| cli | Helpers for Developing Command Line Interfaces |
| cliapp | Create Rich Command Line Applications |
| clickableImageMap | Implement 'tableGrob' Object as a Clickable Image Map |
| clickb | Web Data Analysis by Bayesian Mixture of Markov Models |
| ClickClust | Model-Based Clustering of Categorical Sequences |
| ClickClustCont | Mixtures of Continuous Time Markov Models |
| ClickHouseHTTP | A Simple HTTP Database Interface to 'ClickHouse' |
| clickR | Semi-Automatic Preprocessing of Messy Data with Change Tracking for Dataset Cleaning |
| clickstream | Analyzes Clickstreams Based on Markov Chains |
| clidamonger | Monthly Climate Data for Germany, Usable for Heating and Cooling Calculations |
| clidatajp | Data from Japan Meteorological Agency |
| cliff | Execute Command Line Programs Interactively |
| clifford | Arbitrary Dimensional Clifford Algebras |
| clifro | Easily Download and Visualise Climate Data from CliFlo |
| CliftLRD | Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series |
| clikcorr | Censoring Data and Likelihood-Based Correlation Estimation |
| climaemet | Climate AEMET Tools |
| climate | Interface to Download Meteorological (and Hydrological) Datasets |
| climateStability | Estimating Climate Stability from Climate Model Data |
| climatol | Climate Tools (Series Homogenization and Derived Products) |
| climatrends | Climate Variability Indices for Ecological Modelling |
| ClimClass | Climate Classification According to Several Indices |
| CLimd | Generating Rainfall Rasters from IMD NetCDF Data |
| clime | Constrained L1-Minimization for Inverse (Covariance) Matrix Estimation |
| climetrics | Climate Change Metrics |
| climextRemes | Tools for Analyzing Climate Extremes |
| ClimInd | Climate Indices |
| ClimMobTools | API Client for the 'ClimMob' Platform |
| ClimProjDiags | Set of Tools to Compute Various Climate Indices |
| climwin | Climate Window Analysis |
| clinDataReview | Clinical Data Review Tool |
| clinDR | Simulation and Analysis Tools for Clinical Dose Response Modeling |
| clinfun | Clinical Trial Design and Data Analysis Functions |
| clinicalomicsdbR | Interface with the 'ClinicalOmicsDB' API, Allowing for Easy Data Downloading and Importing |
| clinicalsignificance | A Toolbox for Clinical Significance Analyses in Intervention Studies |
| ClinicalTrialSummary | Summary Measures for Clinical Trials with Survival Outcomes |
| ClinicalUtilityRecal | Recalibration Methods for Improved Clinical Utility of Risk Scores |
| clinmon | Hemodynamic Calculations from Clinical Monitoring |
| clinPK | Clinical Pharmacokinetics Toolkit |
| clinsig | Clinical Significance Functions |
| ClinSigMeasures | Clinical Significance Measures |
| clinspacy | Clinical Natural Language Processing using 'spaCy', 'scispaCy', and 'medspaCy' |
| clintools | Tools for Clinical Research |
| clintrialx | Connect and Work with Clinical Trials Data Sources |
| clinUtils | General Utility Functions for Analysis of Clinical Data |
| cliot | Clinical Indices and Outcomes Tools |
| clipp | Calculating Likelihoods by Pedigree Paring |
| clipr | Read and Write from the System Clipboard |
| CliquePercolation | Clique Percolation for Networks |
| clisymbols | Unicode Symbols at the R Prompt |
| CLME | Constrained Inference for Linear Mixed Effects Models |
| clmplus | Tool-Box of Chain Ladder Plus Models |
| clock | Date-Time Types and Tools |
| clockify | A Wrapper for the 'Clockify' API |
| clogitboost | Boosting Conditional Logit Model |
| clogitL1 | Fitting Exact Conditional Logistic Regression with Lasso and Elastic Net Penalties |
| cloneRate | Estimate Growth Rates from Phylogenetic Trees |
| CloneSeeker | Seeking and Finding Clones in Copy Number and Sequencing Data |
| CLONETv2 | Clonality Estimates in Tumor |
| clordr | Composite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data |
| closeloop | Integrate Single-Arm Observational Data in Network Meta Analysis |
| cloudfs | Streamlined Interface to Interact with Cloud Storage Platforms |
| cloudml | Interface to the Google Cloud Machine Learning Platform |
| cloudos | R Client Library for CloudOS |
| cloudstoR | Simplifies Access to Cloudstor API |
| cloudUtil | Cloud Utilization Plots |
| clptheory | Compute Price of Production and Labor Values |
| clr | Curve Linear Regression via Dimension Reduction |
| clrng | Parallel Random Number Generation on GPU |
| CLSIEP15 | Clinical and Laboratory Standards Institute (CLSI) EP15-A3 Calculations |
| clttools | Central Limit Theorem Experiments (Theoretical and Simulation) |
| clubpro | Classification Using Binary Procrustes Rotation |
| clubSandwich | Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections |
| clue | Cluster Ensembles |
| ClueR | Cluster Evaluation |
| clugenr | Multidimensional Cluster Generation Using Support Lines |
| CluMP | Clustering of Micro Panel Data |
| ClusBoot | Bootstrap a Clustering Solution to Establish the Stability of the Clusters |
| cluscov | Clustered Covariate Regression |
| clusEvol | A Procedure for Cluster Evolution Analytics |
| ClusPred | Simultaneous Semi-Parametric Estimation of Clustering and Regression |
| clusrank | Wilcoxon Rank Tests for Clustered Data |
| ClusROC | ROC Analysis in Three-Class Classification Problems for Clustered Data |
| ClussCluster | Simultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data |
| clust.bin.pair | Statistical Methods for Analyzing Clustered Matched Pair Data |
| clustAnalytics | Cluster Evaluation on Graphs |
| ClustAssess | Tools for Assessing Clustering |
| ClustBlock | Clustering of Datasets |
| ClusTCR2 | Identifying Similar T Cell Receptor Hyper-Variable Sequences with 'ClusTCR2' |
| clustcurv | Determining Groups in Multiples Curves |
| clustEff | Clusters of Effects Curves in Quantile Regression Models |
| cluster | "Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al. |
| cluster.datasets | Cluster Analysis Data Sets |
| Cluster.OBeu | Cluster Analysis 'OpenBudgets.eu' |
| clusterability | Performs Tests for Cluster Tendency of a Data Set |
| ClusterBootstrap | Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap |
| clusterCrit | Clustering Indices |
| ClusteredMutations | Location and Visualization of Clustered Somatic Mutations |
| clusterGeneration | Random Cluster Generation (with Specified Degree of Separation) |
| clusterhap | Clustering Genotypes in Haplotypes |
| clusterHD | Tools for Clustering High-Dimensional Data |
| Clustering | Techniques for Evaluating Clustering |
| clustering.sc.dp | Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint |
| clusterMI | Cluster Analysis with Missing Values by Multiple Imputation |
| clustermole | Unbiased Single-Cell Transcriptomic Data Cell Type Identification |
| clustermq | Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque) |
| clusternomics | Integrative Clustering for Heterogeneous Biomedical Datasets |
| ClusterR | Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering |
| ClusterRankTest | Rank Tests for Clustered Data |
| clusterRepro | Reproducibility of Gene Expression Clusters |
| clusterSEs | Calculate Cluster-Robust p-Values and Confidence Intervals |
| clusterSim | Searching for Optimal Clustering Procedure for a Data Set |
| ClusterStability | Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions |
| clustertend | Check the Clustering Tendency |
| ClusterVAR | Fitting Latent Class Vector-Autoregressive (VAR) Models |
| ClustGeo | Hierarchical Clustering with Spatial Constraints |
| ClustImpute | K-Means Clustering with Build-in Missing Data Imputation |
| clustlearn | Learn Clustering Techniques Through Examples and Code |
| ClustMC | Cluster-Based Multiple Comparisons |
| clustMD | Model Based Clustering for Mixed Data |
| clustMixType | k-Prototypes Clustering for Mixed Variable-Type Data |
| clustNet | Network-Based Clustering |
| ClustOfVar | Clustering of Variables |
| ClusTorus | Prediction and Clustering on the Torus by Conformal Prediction |
| clustra | Clustering Longitudinal Trajectories |
| clusTransition | Monitor Changes in Cluster Solutions of Dynamic Datasets |
| clustrd | Methods for Joint Dimension Reduction and Clustering |
| clustree | Visualise Clusterings at Different Resolutions |
| clustringr | Cluster Strings by Edit-Distance |
| CLUSTShiny | Interactive Document for Working with Cluster Analysis |
| clustTMB | Spatio-Temporal Finite Mixture Model using 'TMB' |
| clustur | Clustering |
| ClustVarLV | Clustering of Variables Around Latent Variables |
| clustvarsel | Variable Selection for Gaussian Model-Based Clustering |
| ClusVis | Gaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering |
| clv | Cluster Validation Techniques |
| clValid | Validation of Clustering Results |
| CLVTools | Tools for Customer Lifetime Value Estimation |
| cmaes | Covariance Matrix Adapting Evolutionary Strategy |
| cmaesr | Covariance Matrix Adaptation Evolution Strategy |
| cmahalanobis | Calculate Distance Measures for a Given List of Data Frames with Factors |
| CMAPSS | Commercial Modular Aero-Propulsion System Simulation Data Set |
| CMapViz | Representation Tool For Output Of Connectivity Map (CMap) Analysis |
| cmaRs | Implementation of the Conic Multivariate Adaptive Regression Splines in R |
| cmbClust | Conditional Mixture Modeling and Model-Based Clustering |
| cmce | Computer Model Calibration for Deterministic and Stochastic Simulators |
| cmcR | An Implementation of the 'Congruent Matching Cells' Method |
| cmdfun | Framework for Building Interfaces to Shell Commands |
| cmenet | Bi-Level Selection of Conditional Main Effects |
| CMF | Collective Matrix Factorization |
| cmfrec | Collective Matrix Factorization for Recommender Systems |
| CMFsurrogate | Calibrated Model Fusion Approach to Combine Surrogate Markers |
| CMGFM | Covariate-Augumented Generalized Factor Model |
| cmhc | Access, Retrieve, and Work with CMHC Data |
| CMHNPA | Cochran-Mantel-Haenszel and Nonparametric ANOVA |
| cml | Conditional Manifold Learning |
| CMLS | Constrained Multivariate Least Squares |
| cmm | Categorical Marginal Models |
| cmmr | CEU Mass Mediator RESTful API |
| CMMs | Compositional Mediation Model |
| cmna | Computational Methods for Numerical Analysis |
| cmocean | Beautiful Colour Maps for Oceanography |
| CMplot | Circle Manhattan Plot |
| cmprsk | Subdistribution Analysis of Competing Risks |
| cmprskcoxmsm | Use IPW to Estimate Treatment Effect under Competing Risks |
| cmprskQR | Analysis of Competing Risks Using Quantile Regressions |
| cmpsR | R Implementation of Congruent Matching Profile Segments Method |
| cmR | Analysis of Cardiac Magnetic Resonance Images |
| cmrutils | Misc Functions of the Center for Mathematical Research |
| cms | Calculate Medicare Reimbursement |
| cmsaf | A Toolbox for CM SAF NetCDF Data |
| cmsafops | Tools for CM SAF NetCDF Data |
| cmsafvis | Tools to Visualize CM SAF NetCDF Data |
| CMShiny | Interactive Document for Working with Confusion Matrix |
| cmstatr | Statistical Methods for Composite Material Data |
| cmstatrExt | More Statistical Methods for Composite Material Data |
| cmtest | Conditional Moments Test |
| cmvnorm | The Complex Multivariate Gaussian Distribution |
| cna | Causal Modeling with Coincidence Analysis |
| CNAIM | Common Network Asset Indices Methodology (CNAIM) |
| cnaOpt | Optimizing Consistency and Coverage in Configurational Causal Modeling |
| cnbdistr | Conditional Negative Binomial Distribution |
| cncaGUI | Canonical Non-Symmetrical Correspondence Analysis in R |
| CNID | Get Basic Information from Chinese ID Number |
| CNLTreg | Complex-Valued Wavelet Lifting for Signal Denoising |
| CNLTtsa | Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis |
| cnmap | China Map Data from AutoNavi Map |
| cNORM | Continuous Norming |
| CNprep | Pre-Process DNA Copy Number (CN) Data for Detection of CN Events |
| CNPS | Nonparametric Statistics |
| cnum | Chinese Numerals Processing |
| CNVRG | Dirichlet Multinomial Modeling of Relative Abundance Data |
| CNVScope | A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization |
| coala | A Framework for Coalescent Simulation |
| coalescentMCMC | MCMC Algorithms for the Coalescent |
| COAP | High-Dimensional Covariate-Augmented Overdispersed Poisson Factor Model |
| coarseDataTools | Analysis of Coarsely Observed Data |
| CoastlineFD | Calculation of the Fractal Dimension of a Coastline |
| coat | Conditional Method Agreement Trees (COAT) |
| cobalt | Covariate Balance Tables and Plots |
| cobiclust | Biclustering via Latent Block Model Adapted to Overdispersed Count Data |
| cobs | Constrained B-Splines (Sparse Matrix Based) |
| coca | Cluster-of-Clusters Analysis |
| cocktailApp | 'shiny' App to Discover Cocktails |
| CoClust | Copula Based Cluster Analysis |
| coconots | Convolution-Closed Models for Count Time Series |
| cocons | Covariate-Based Covariance Functions for Nonstationary Spatial Modeling |
| COCONUT | COmbat CO-Normalization Using conTrols (COCONUT) |
| cocoon | Extract, Format, and Print Statistical Output |
| cocor | Comparing Correlations |
| cocorresp | Co-Correspondence Analysis Methods |
| cocosoR | CoCoSo - Combined Compromise Solution Method for MCDA |
| cocotest | Dependence Condition Test Using Ranked Correlation Coefficients |
| cocron | Statistical Comparisons of Two or more Alpha Coefficients |
| coda | Output Analysis and Diagnostics for MCMC |
| coda.base | A Basic Set of Functions for Compositional Data Analysis |
| coda4microbiome | Compositional Data Analysis for Microbiome Studies |
| codacore | Learning Sparse Log-Ratios for Compositional Data |
| CoDaImpact | Interpreting CoDa Regression Models |
| codalm | Transformation-Free Linear Regression for Compositional Outcomes and Predictors |
| codaredistlm | Compositional Data Linear Models with Composition Redistribution |
| CodataGS | Genomic Prediction Using SNP Codata |
| cOde | Automated C Code Generation for 'deSolve', 'bvpSolve' |
| codebook | Automatic Codebooks from Metadata Encoded in Dataset Attributes |
| codebookr | Create Codebooks from Data Frames |
| codebreaker | Retro Logic Game |
| codeCollection | Collection of Codes with Labels |
| codecountR | Counting Codes in a Text and Preparing Data for Analysis |
| CodeDepends | Analysis of R Code for Reproducible Research and Code Comprehension |
| CodelistGenerator | Identify Relevant Clinical Codes and Evaluate Their Use |
| codemeta | A Smaller 'codemetar' Package |
| codemetar | Generate 'CodeMeta' Metadata for R Packages |
| codename | Generation of Code Names for Organizations, People, Projects, and Whatever Else |
| codep | Multiscale Codependence Analysis |
| coder | Deterministic Categorization of Items Based on External Code Data |
| codetools | Code Analysis Tools for R |
| codewhere | Find the Location of an R Package's Code |
| codexcopd | The CODEX (Comorbidity, Obstruction, Dyspnea, and Previous Severe Exacerbations) Index: Short and Medium-Term Prognosis in Patients Hospitalized for Chronic Obstructive Pulmonary Disease (COPD) Exacerbations |
| codez | Seq2Seq Encoder-Decoder Model for Time-Feature Analysis Based on Tensorflow |
| codified | Produce Standard/Formalized Demographics Tables |
| CoDiNA | Co-Expression Differential Network Analysis |
| codingMatrices | Alternative Factor Coding Matrices for Linear Model Formulae |
| codyn | Community Dynamics Metrics |
| coefa | Meta Analysis of Factor Analysis Based on CO-Occurrence Matrices |
| coefficientalpha | Robust Coefficient Alpha and Omega with Missing and Non-Normal Data |
| coefplot | Plots Coefficients from Fitted Models |
| coenocliner | Coenocline Simulation |
| coenoflex | Gradient-Based Coenospace Vegetation Simulator |
| cofad | Contrast Analyses for Factorial Designs |
| cofeatureR | Generate Cofeature Matrices |
| coffee | Chronological Ordering for Fossils and Environmental Events |
| cofid | Copepod Fish Interaction Database |
| CoFRA | Complete Functional Regulation Analysis |
| coga | Convolution of Gamma Distributions |
| coglasso | Collaborative Graphical Lasso - Multi-Omics Network Reconstruction |
| cogmapr | Cognitive Mapping Tools Based on Coding of Textual Sources |
| cognitoR | Authentication for 'Shiny' Apps with 'Amazon Cognito' |
| CohensdpLibrary | Cohen's D_p Computation with Confidence Intervals |
| CohortAlgebra | Use of Interval Algebra to Create New Cohort(s) from Existing Cohorts |
| cohortBuilder | Data Source Agnostic Filtering Tools |
| CohortCharacteristics | Summarise and Visualise Characteristics of Patients in the OMOP CDM |
| CohortConstructor | Build and Manipulate Study Cohorts Using a Common Data Model |
| CohortExplorer | Explorer of Profiles of Patients in a Cohort |
| CohortGenerator | Cohort Generation for the OMOP Common Data Model |
| CohortPlat | Simulation of Cohort Platform Trials for Combination Treatments |
| cohorts | Cohort Analysis Made Easy |
| CohortSurvival | Estimate Survival from Common Data Model Cohorts |
| CohortSymmetry | Sequence Symmetry Analysis Using the Observational Medical Outcomes Partnership Common Data Model |
| cohorttools | Cohort Data Analyses |
| coil | Contextualization and Evaluation of COI-5P Barcode Data |
| CoImp | Parametric and Non-Parametric Copula-Based Imputation Methods |
| coin | Conditional Inference Procedures in a Permutation Test Framework |
| coinmarketcapr | Get 'Cryptocurrencies' Market Cap Prices from Coin Market Cap |
| Coinprofile | Coincident Profile |
| COINr | Composite Indicator Construction and Analysis |
| cointmonitoR | Consistent Monitoring of Stationarity and Cointegrating Relationships |
| cointReg | Parameter Estimation and Inference in a Cointegrating Regression |
| cold | Count Longitudinal Data |
| colf | Constrained Optimization on Linear Function |
| collapse | Advanced and Fast Data Transformation |
| CollapseLevels | Collapses Levels, Computes Information Value and WoE |
| collapsibleTree | Interactive Collapsible Tree Diagrams using 'D3.js' |
| collateral | Quickly Evaluate Captured Side Effects |
| collatz | Functions Related to the Collatz/Syracuse/3n+1 Problem |
| collections | High Performance Container Data Types |
| collegeScorecard | US College Scorecard Data |
| collidr | Check for Namespace Collisions Across Packages and Functions on CRAN |
| collin | Visualization the Effects of Collinearity in Distributed Lag Models and Other Linear Models |
| collinear | Automated Multicollinearity Management |
| CollocInfer | Collocation Inference for Dynamic Systems |
| collpcm | Collapsed Latent Position Cluster Model for Social Networks |
| collUtils | Auxiliary Package for Package 'CollapsABEL' |
| colmozzie | Dengue Cases and Climate Variables in Colombo Sri Lanka |
| coloc | Colocalisation Tests of Two Genetic Traits |
| colocalization | Normalized Spatial Intensity Correlation |
| colocalized | Clusters of Colocalized Sequences |
| colocPropTest | Proportional Testing for Colocalisation Analysis |
| colocr | Conduct Co-Localization Analysis of Fluorescence Microscopy Images |
| ColOpenData | Download Colombian Demographic, Climate and Geospatial Data |
| colorblindcheck | Check Color Palettes for Problems with Color Vision Deficiency |
| colorBlindness | Safe Color Set for Color Blindness |
| colorDF | Colorful Data Frames in R Terminal |
| colordistance | Distance Metrics for Image Color Similarity |
| colorednoise | Simulate Temporally Autocorrelated Populations |
| colorfindr | Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images |
| colorhcplot | Colorful Hierarchical Clustering Dendrograms |
| colorist | Coloring Wildlife Distributions in Space-Time |
| colorizer | Colorize Old Images Using the 'DeOldify' Image Colorization API |
| colormap | Color Palettes using Colormaps Node Module |
| ColorNameR | Give Colors a Name |
| colorpatch | Optimized Rendering of Fold Changes and Confidence Values |
| colorplane | Basic S4 Classes and Methods for Mapping Between Numeric Values and Colors |
| colorr | Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams |
| colorRamp2 | Generate Color Mapping Functions |
| colorRamps | Builds Color Tables |
| colorrepel | Repel Visually Similar Colors for Colorblind Users in Various Plots |
| colors3d | Generate 2D and 3D Color Palettes |
| colorscience | Color Science Methods and Data |
| colorsGen | Generation of Random Colors |
| colorspace | A Toolbox for Manipulating and Assessing Colors and Palettes |
| colorSpec | Color Calculations with Emphasis on Spectral Data |
| Colossus | "Risk Model Regression and Analysis with Complex Non-Linear Models" |
| colouR | Create Colour Palettes from Images |
| colourlovers | R Client for the COLOURlovers API |
| colourpicker | A Colour Picker Tool for Shiny and for Selecting Colours in Plots |
| colourvalues | Assigns Colours to Values |
| colourvision | Colour Vision Models |
| COLP | Causal Discovery for Categorical Data with Label Permutation |
| cols | Constrained Ordinary Least Squares |
| cols4all | Colors for all |
| colt | Command-Line Color Themes |
| comat | Creates Co-Occurrence Matrices of Spatial Data |
| comato | Analysis of Concept Maps and Concept Landscapes |
| COMBAT | A Combined Association Test for Genes using Summary Statistics |
| combat.enigma | Fit and Apply ComBat, LMM, or Prescaling Harmonization for ENIGMA and Other Multisite MRI Data |
| combinat | combinatorics utilities |
| combinationpvalues | Combination of Independent P-Values |
| combinatorics | Introduction to Some Combinatorial Relations |
| combinedevents | Calculate Scores and Marks for Track and Field Combined Events |
| CombinePortfolio | Estimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies |
| combinIT | A Combined Interaction Test for Unreplicated Two-Way Tables |
| CombinS | Construction Methods of some Series of PBIB Designs |
| combiroc | Selection and Ranking of Omics Biomarkers Combinations Made Easy |
| combiter | Combinatorics Iterators |
| COMBO | Correcting Misclassified Binary Outcomes in Association Studies |
| comclim | Community Climate Statistics |
| cometExactTest | Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm |
| cometr | 'Comet' API for R |
| comets | Covariance Measure Tests for Conditional Independence |
| comf | Models and Equations for Human Comfort Research |
| comFuncs | Commonly Used Functions for R Shiny Applications |
| ComICS | Computational Methods for Immune Cell-Type Subsets |
| CoMiRe | Convex Mixture Regression |
| COMIX | Coarsened Mixtures of Hierarchical Skew Kernels |
| COMMA | Correcting Misclassified Mediation Analysis |
| commafree | Call Functions Without Commas Between Arguments |
| CommEcol | Community Ecology Analyses |
| CommKern | Network-Based Communities and Kernel Machine Methods |
| common | Solutions for Common Problems in Base R |
| CommonDataModel | OMOP CDM DDL and Documentation Generator |
| CommonJavaJars | Useful Libraries for Building a Java Based GUI under R |
| commonmark | High Performance CommonMark and Github Markdown Rendering in R |
| CommonMean.Copula | Common Mean Vector under Copula Models |
| commonsMath | JAR Files of the Apache Commons Mathematics Library |
| communication | Feature Extraction and Model Estimation for Audio of Human Speech |
| comorbidity | Computing Comorbidity Scores |
| comorbidPGS | Assessing Predisposition Between Phenotypes using Polygenic Scores |
| comorosmaps | Comoro Islands Maps |
| Comp2ROC | Compare Two ROC Curves that Intersect |
| comparator | Comparison Functions for Clustering and Record Linkage |
| compare | Comparing Objects for Differences |
| compareC | Compare Two Correlated C Indices with Right-Censored Survival Outcome |
| CompareCausalNetworks | Interface to Diverse Estimation Methods of Causal Networks |
| CompAREdesign | Statistical Functions for the Design of Studies with Composite Endpoints |
| compareDF | Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure |
| compareGroups | Descriptive Analysis by Groups |
| compareMCMCs | Compare MCMC Efficiency from 'nimble' and/or Other MCMC Engines |
| CompareMultipleModels | Finding the Best Model Using Eight Metrics Values |
| comparer | Compare Output and Run Time |
| CompareTests | Correct for Verification Bias in Diagnostic Accuracy & Agreement |
| comparison | Multivariate Likelihood Ratio Calculation and Evaluation |
| ComparisonSurv | Comparison of Survival Curves Between Two Groups |
| compas | Conformational Manipulations of Protein Atomic Structures |
| CompDist | Multisection Composite Distributions |
| comperank | Ranking Methods for Competition Results |
| comperes | Manage Competition Results |
| competitiontoolbox | A Graphical User Interface for Antitrust and Trade Practitioners |
| CompExpDes | Computer Experiment Designs |
| CompGR | Complete Annual Growth Rate Generator |
| Compind | Composite Indicators Functions |
| compindexR | Calculates Composite Index |
| compindPCA | Computation of Relative Weights of Variables and Composite Index Values Based on PCA |
| completejourney | Retail Shopping Data |
| complex | Time Series Analysis and Forecasting Using Complex Variables |
| complexity | Calculate the Proportion of Permutations in Line with an Informative Hypothesis |
| complexlm | Linear Fitting for Complex Valued Data |
| complexNet | Complex Network Generation |
| complexplus | Functions of Complex or Real Variable |
| ComplexUpset | Create Complex UpSet Plots Using 'ggplot2' Components |
| complmrob | Robust Linear Regression with Compositional Data as Covariates |
| CompMix | A Comprehensive Toolkit for Environmental Mixtures Analysis ('CompMix') |
| CompModels | Pseudo Computer Models for Optimization |
| COMPoissonReg | Conway-Maxwell Poisson (COM-Poisson) Regression |
| CompositeReliability | Determine the Composite Reliability of a Naturalistic, Unbalanced Dataset |
| compositeReliabilityInNestedDesigns | Optimizing the Composite Reliability in Multivariate Nested Designs |
| Compositional | Compositional Data Analysis |
| CompositionalML | Machine Learning with Compositional Data |
| CompositionalRF | Multivariate Random Forest with Compositional Responses |
| compositions | Compositional Data Analysis |
| compound.Cox | Univariate Feature Selection and Compound Covariate for Predicting Survival, Including Copula-Based Analyses for Dependent Censoring |
| CompoundEvents | Statistical Modeling of Compound Events |
| CompPareto | Discrete Composite Distributions with Pareto Tails |
| CompQuadForm | Distribution Function of Quadratic Forms in Normal Variables |
| CompR | Paired Comparison Data Analysis |
| comprehenr | List Comprehensions |
| compute.es | Compute Effect Sizes |
| ComradesM | The Comrades Marathon 1921 to 2019 |
| ComRiskModel | Fitting of Complementary Risk Models |
| comsimitv | Flexible Framework for Simulating Community Assembly |
| comstab | Partitioning the Drivers of Stability of Ecological Communities |
| comtradr | Interface with the United Nations Comtrade API |
| con2aqi | Calculate the AQI from Pollutant Concentration |
| con2lki | Calculate the Dutch Air Quality Index (LKI) |
| Conake | Continuous Associated Kernel Estimation |
| concatenate | Human-Friendly Text from Unknown Strings |
| concatipede | Easy Concatenation of Fasta Sequences |
| concaveman | A Very Fast 2D Concave Hull Algorithm |
| conclust | Pairwise Constraints Clustering |
| concom | Connected Components of an Undirected Graph |
| ConconiAnaerobicThresholdTest | Conconi Estimate of Anaerobic Threshold from a TCX File |
| ConConPiWiFun | Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions |
| concordance | Product Concordance |
| ConcordanceTest | An Alternative to the Kruskal-Wallis Based on the Kendall Tau Distance |
| concorR | CONCOR and Supplemental Functions |
| concstats | Market Structure, Concentration and Inequality Measures |
| CONCUR | Copy Number Profile Curve-Based Association Test |
| cond | Approximate Conditional Inference for Logistic and Loglinear Models |
| CondCopulas | Estimation and Inference for Conditional Copula Models |
| condensr | Academic Group Website Generator |
| condformat | Conditional Formatting in Data Frames |
| condGEE | Parameter Estimation in Conditional GEE for Recurrent Event Gap Times |
| CondIndTests | Nonlinear Conditional Independence Tests |
| condir | Computation of P Values and Bayes Factors for Conditioning Data |
| CondiS | Censored Data Imputation for Direct Modeling |
| conditionalProbNspades | Conditional Probabilities of Distributions Across Hearts Hands |
| conditionz | Control How Many Times Conditions are Thrown |
| condMVNorm | Conditional Multivariate Normal Distribution |
| CondMVT | Conditional Multivariate t Distribution, Expectation Maximization Algorithm, and Its Stochastic Variants |
| condor | Interact with 'Condor' from R via SSH |
| condorOptions | Trading Condor Options Strategies |
| condSURV | Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data |
| condTruncMVN | Conditional Truncated Multivariate Normal Distribution |
| conductor | Create Tours in 'Shiny' Apps Using 'Shepherd.js' |
| condvis | Conditional Visualization for Statistical Models |
| condvis2 | Interactive Conditional Visualization for Supervised and Unsupervised Models in Shiny |
| coneproj | Primal or Dual Cone Projections with Routines for Constrained Regression |
| conf | Visualization and Analysis of Statistical Measures of Confidence |
| conf.design | Construction of factorial designs |
| confcons | Confidence and Consistency of Predictive Distribution Models |
| confidence | Confidence Estimation of Environmental State Classifications |
| ConfidenceEllipse | Computation of 2D and 3D Elliptical Joint Confidence Regions |
| config | Manage Environment Specific Configuration Values |
| ConfigParser | Package to Parse an INI File, Including Variable Interpolation |
| configr | An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML) |
| configural | Multivariate Profile Analysis |
| confinterpret | Descriptive Interpretations of Confidence Intervals |
| confintr | Confidence Intervals |
| confintROB | Confidence Intervals for Robust and Classical Linear Mixed Model Estimators |
| ConfIntVariance | Confidence Interval for the Univariate Population Variance without Normality Assumption |
| conflicted | An Alternative Conflict Resolution Strategy |
| conflr | Client for 'Confluence' API |
| ConfMatrix | Confusion Matrix |
| conformalbayes | Jackknife(+) Predictive Intervals for Bayesian Models |
| conformalClassification | Transductive and Inductive Conformal Predictions for Classification Problems |
| conformalInference.fd | Tools for Conformal Inference for Regression in Multivariate Functional Setting |
| conformalInference.multi | Conformal Inference Tools for Regression with Multivariate Response |
| conformalpvalue | Computes Conformal p-Values |
| ConformalSmallest | Efficient Tuning-Free Conformal Prediction |
| confreq | Configural Frequencies Analysis Using Log-Linear Modeling |
| confSAM | Estimates and Bounds for the False Discovery Proportion, by Permutation |
| ConfusionTableR | Confusion Matrix Toolset |
| ConfZIC | Confidence Envelopes for Model Selection Criteria Based on Minimum ZIC |
| congress | Access the Congress.gov API |
| CongressData | A Functional Tool for 'CongressData' |
| CongreveLamsdell2016 | Distance Metrics for Trees Generated by Congreve and Lamsdell |
| CoNI | Correlation Guided Network Integration (CoNI) |
| conicfit | Algorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov |
| Conigrave | Flexible Tools for Multiple Imputation |
| conjoint | An Implementation of Conjoint Analysis Method |
| conjurer | A Parametric Method for Generating Synthetic Data |
| conleyreg | Estimations using Conley Standard Errors |
| conmet | Construct Measurement Evaluation Tool |
| ConNEcT | Contingency Measure-Based Networks for Binary Time Series |
| connectapi | Utilities for Interacting with the 'Posit Connect' Server API |
| ConnectednessApproach | Connectedness Approach |
| connections | Integrates with the 'RStudio' Connections Pane and 'pins' |
| connectoModa | Download Data from Moda |
| connectwidgets | Organize and Curate Your Content Within 'Posit Connect' |
| ConnMatTools | Tools for Working with Connectivity Data |
| conogive | Congeneric Normal-Ogive Model |
| conos | Clustering on Network of Samples |
| conover.test | Conover-Iman Test of Multiple Comparisons Using Rank Sums |
| conquer | Convolution-Type Smoothed Quantile Regression |
| conquestr | An R Package to Extend 'ACER ConQuest' |
| conrad | Client for the Microsoft's 'Cognitive Services Text to Speech REST' API |
| ConsensusClustering | Consensus Clustering |
| ConsensusOPLS | Consensus OPLS for Multi-Block Data Fusion |
| conserveR | Identifying Conservation Prioritization Methods Based on Data Availability |
| consibiocloudclient | A Client for the 'Consibio Cloud' API |
| consolechoice | An Easy and Quick Way to Loop a Character Vector as a Menu in the Console |
| consort | Create Consort Diagram |
| consortr | Interactive Consort Flow Diagrams |
| ConSpline | Partial Linear Least-Squares Regression using Constrained Splines |
| ConsRank | Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach |
| ConsRankClass | Classification and Clustering of Preference Rankings |
| ConsReg | Fits Regression & ARMA Models Subject to Constraints to the Coefficient |
| constants | Reference on Constants, Units and Uncertainty |
| constellation | Identify Event Sequences Using Time Series Joins |
| constrainedKriging | Constrained, Covariance-Matching Constrained and Universal Point or Block Kriging |
| conStruct | Models Spatially Continuous and Discrete Population Genetic Structure |
| constructive | Display Idiomatic Code to Construct Most R Objects |
| contactdata | Social Contact Matrices for 177 Countries |
| container | Extending Base 'R' Lists |
| ContaminatedMixt | Clustering and Classification with the Contaminated Normal |
| contentid | An Interface for Content-Based Identifiers |
| conText | 'a la Carte' on Text (ConText) Embedding Regression |
| contfrac | Continued Fractions |
| contFracR | Continued Fraction Generators and Evaluators |
| contingency | Discrete Multivariate Probability Distributions |
| contingencytables | Statistical Analysis of Contingency Tables |
| contoureR | Contouring of Non-Regular Three-Dimensional Data |
| ContourFunctions | Create Contour Plots from Data or a Function |
| contourPlot | Plots x,y,z Co-Ordinates in a Contour Map |
| contrast | A Collection of Contrast Methods |
| contrastable | Consistent Contrast Coding for Factors |
| conTree | Contrast Trees and Boosting |
| ContRespPP | Predictive Probability for a Continuous Response with an ANOVA Structure |
| contribution | A Tiny Contribution Table Generator Based on 'ggplot2' |
| control | A Control Systems Toolbox |
| controlfunctionIV | Control Function Methods with Possibly Invalid Instrumental Variables |
| controlTest | Quantile Comparison for Two-Sample Right-Censored Survival Data |
| contsurvplot | Visualize the Effect of a Continuous Variable on a Time-to-Event Outcome |
| contTimeCausal | Continuous Time Causal Models |
| convdistr | Convolute Probabilistic Distributions |
| ConvergenceClubs | Finding Convergence Clubs |
| ConvergenceConcepts | Seeing Convergence Concepts in Action |
| convergEU | Monitoring Convergence of EU Countries |
| conversim | Conversation Similarity Analysis |
| convertBCD | Convert Decimal to Binary-Coded Decimal (BCD) Form and Vice Versa |
| convertbonds | Use the Given Parameters to Calculate the European Option Value |
| convertid | Convert Gene IDs Between Each Other and Fetch Annotations from Biomart |
| ConvertPar | Estimating IRT Parameters via Machine Learning Algorithms |
| convertr | Convert Between Units |
| convevol | Analysis of Convergent Evolution |
| convey | Income Concentration Analysis with Complex Survey Samples |
| Convolutioner | Convolution of Data |
| convoSPAT | Convolution-Based Nonstationary Spatial Modeling |
| cooccur | Probabilistic Species Co-Occurrence Analysis in R |
| CooccurrenceAffinity | Affinity in Co-Occurrence Data |
| cookiecutter | Generate Project Files from a Template |
| cookiemonster | Your Friendly Solution to Managing Browser Cookies |
| cookies | Use Browser Cookies with 'shiny' |
| CoOL | Causes of Outcome Learning |
| cooltools | Practical Tools for Scientific Computations and Visualizations |
| coop | Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations |
| CoopGame | Important Concepts of Cooperative Game Theory |
| CoordinateCleaner | Automated Cleaning of Occurrence Records from Biological Collections |
| CooRTweet | Coordinated Networks Detection on Social Media |
| copBasic | General Bivariate Copula Theory and Many Utility Functions |
| copCAR | Fitting the copCAR Regression Model for Discrete Areal Data |
| copcor | Correlates of Protection and Correlates of Risk Functions |
| CopCTS | Copula-Based Semiparametric Analysis for Time Series Data with Detection Limits |
| cope | Coverage Probability Excursion (CoPE) Sets |
| copent | Estimating Copula Entropy and Transfer Entropy |
| CopernicusDEM | Copernicus Digital Elevation Models |
| CopernicusMarine | Search Download and Handle Data from Copernicus Marine Service Information |
| cophescan | Adaptation of the Coloc Method for PheWAS |
| coppeCosenzaR | COPPE-Cosenza Fuzzy Hierarchy Model |
| copre | Tools for Nonparametric Martingale Posterior Sampling |
| cops | Cluster Optimized Proximity Scaling |
| CopSens | Copula-Based Sensitivity Analysis for Observational Causal Inference |
| copula | Multivariate Dependence with Copulas |
| Copula.Markov | Copula-Based Estimation and Statistical Process Control for Serially Correlated Time Series |
| Copula.Markov.survival | Copula Markov Model with Dependent Censoring |
| Copula.surv | Analysis of Bivariate Survival Data Based on Copulas |
| copulaboost | Fitting Additive Copula Regression Models for Binary Outcome Regression |
| CopulaCenR | Copula-Based Regression Models for Multivariate Censored Data |
| copulaData | Data Sets for Copula Modeling |
| copulaedas | Estimation of Distribution Algorithms Based on Copulas |
| CopulaGAMM | Copula-Based Mixed Regression Models |
| CopulaInference | Estimation and Goodness-of-Fit of Copula-Based Models with Arbitrary Distributions |
| copulareg | Copula Regression |
| CopulaREMADA | Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies |
| copulaSim | Virtual Patient Simulation by Copula Invariance Property |
| copyseparator | Assembling Long Gene Copies from Short Read Data |
| COR | The COR for Optimal Subset Selection in Distributed Estimation |
| cora | Cora Data for Entity Resolution |
| coRanking | Co-Ranking Matrix |
| corazon | Apply 'colorffy' Color Gradients Within 'shiny' Elements |
| CorBin | Generate High-Dimensional Binary Data with Correlation Structures |
| corbouli | Corbae-Ouliaris Frequency Domain Filtering |
| corclass | Correlational Class Analysis |
| cord | Community Estimation in G-Models via CORD |
| cordillera | Calculation of the OPTICS Cordillera |
| CORE | Cores of Recurrent Events |
| coreCollection | Core Collection |
| coreCT | Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging |
| corehunter | Multi-Purpose Core Subset Selection |
| CORElearn | Classification, Regression and Feature Evaluation |
| corels | R Binding for the 'Certifiably Optimal RulE ListS (Corels)' Learner |
| CoreMicrobiomeR | Identification of Core Microbiome |
| coreNLP | Wrappers Around Stanford CoreNLP Tools |
| coreSim | Core Functionality for Simulating Quantities of Interest from Generalised Linear Models |
| corHMM | Hidden Markov Models of Character Evolution |
| corkscrew | Preprocessor for Data Modeling |
| corlink | Record Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields |
| CorMID | Correct Mass Isotopologue Distribution Vectors |
| corncob | Count Regression for Correlated Observations with the Beta-Binomial |
| CornerstoneR | Collection of Scripts for Interface Between 'Cornerstone' and 'R' |
| cornet | Penalised Regression for Dichotomised Outcomes |
| coro | 'Coroutines' for R |
| coroICA | Confounding Robust Independent Component Analysis for Noisy and Grouped Data |
| corona | Coronavirus ('Rona') Data Exploration |
| coronavirus | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset |
| corpcor | Efficient Estimation of Covariance and (Partial) Correlation |
| corpmetrics | Tools for Valuation, Financial Metrics and Modeling in Corporate Finance |
| corpora | Statistics and Data Sets for Corpus Frequency Data |
| corporaexplorer | A 'Shiny' App for Exploration of Text Collections |
| CoRpower | Power Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials |
| corpustools | Managing, Querying and Analyzing Tokenized Text |
| corr2D | Implementation of 2D Correlation Analysis in R |
| corrarray | Correlation Arrays and 2-Sample Correlation Matrices |
| CorrBin | Nonparametrics with Clustered Binary and Multinomial Data |
| corrcoverage | Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping |
| corrDNA | Finding Associations in Position-Wise Aligned DNA Sequence Dataset |
| correctedAUC | Correcting AUC for Measurement Error |
| CorrectedFDR | Correcting False Discovery Rates |
| CorrectOverloadedPeaks | Correct Overloaded Peaks from GC-APCI-MS Data |
| correctR | Corrected Test Statistics for Comparing Machine Learning Models on Correlated Samples |
| correlation | Methods for Correlation Analysis |
| correlationfunnel | Speed Up Exploratory Data Analysis (EDA) with the Correlation Funnel |
| correlbinom | Correlated Binomial Probabilities |
| Correlplot | A Collection of Functions for Graphing Correlation Matrices |
| correspondenceTables | Creating Correspondence Tables Between Two Statistical Classifications |
| corrfuns | Correlation Coefficient Related Functions |
| corrgram | Plot a Correlogram |
| corrgrapher | Explore Correlations Between Variables in a Machine Learning Model |
| corrMCT | Correlated Weighted Hochberg |
| corrmeta | Correlated Meta-Analysis |
| CorrMixed | Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models |
| corrplot | Visualization of a Correlation Matrix |
| corrr | Correlations in R |
| corrsieve | Software for Summarising and Evaluating STRUCTURE Output |
| corrtable | Creates and Saves Out a Correlation Table with Significance Levels Indicated |
| CorrToolBox | Modeling Correlational Magnitude Transformations in Discretization Contexts |
| corrViz | Visualise Correlations |
| corset | Arbitrary Bounding of Series and Time Series Objects |
| corTest | Robust Tests for Equal Correlation |
| corTESTsrd | Significance Testing of Rank Cross-Correlations under SRD |
| corto | Inference of Gene Regulatory Networks |
| corx | Create and Format Correlation Matrices |
| cosa | Bound Constrained Optimal Sample Size Allocation |
| cosimmr | Fast Fitting of Stable Isotope Mixing Models with Covariates |
| cosinor | Tools for Estimating and Predicting the Cosinor Model |
| cosinor2 | Extended Tools for Cosinor Analysis of Rhythms |
| cosmicsig | Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer) |
| cosmoFns | Functions for Cosmological Distances, Times, Luminosities, Etc |
| CoSMoS | Complete Stochastic Modelling Solution |
| cosso | Fit Regularized Nonparametric Regression Models Using COSSO Penalty |
| COST | Copula-Based Semiparametric Models for Spatio-Temporal Data |
| costat | Time Series Costationarity Determination |
| costsensitive | Cost-Sensitive Multi-Class Classification |
| CoTiMA | Continuous Time Meta-Analysis ('CoTiMA') |
| cotram | Count Transformation Models |
| cotrend | Consistent Co-Trending Rank Selection |
| COUNT | Functions, Data and Code for Count Data |
| countcolors | Locates and Counts Pixels Within Color Range(s) in Images |
| countdata | The Beta-Binomial Test for Count Data |
| countDM | Estimation of Count Data Models |
| countdown | A Countdown Timer for HTML Presentations, Documents, and Web Apps |
| Counterfactual | Estimation and Inference Methods for Counterfactual Analysis |
| counterfactuals | Counterfactual Explanations |
| Counternull | Randomization-Based Inference |
| countfitteR | Comprehensive Automatized Evaluation of Distribution Models for Count Data |
| countgmifs | Discrete Response Regression for High-Dimensional Data |
| countHMM | Penalized Estimation of Flexible Hidden Markov Models for Time Series of Counts |
| countland | Analysis of Biological Count Data, Especially from Single-Cell RNA-Seq |
| countprop | Calculate Model-Based Metrics of Proportionality on Count-Based Compositional Data |
| Countr | Flexible Univariate Count Models Based on Renewal Processes |
| countries | Deal with Country Data in an Easy Way |
| countrycode | Convert Country Names and Country Codes |
| CountsEPPM | Mean and Variance Modeling of Count Data |
| countsplit | Splitting a Count Matrix into Independent Folds |
| countSTAR | Flexible Modeling of Count Data |
| countToFPKM | Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM) |
| countTransformers | Transform Counts in RNA-Seq Data Analysis |
| countts | Thomson Sampling for Zero-Inflated Count Outcomes |
| coursekata | Packages and Functions for 'CourseKata' Courses |
| covadap | Implement Covariate-Adaptive Randomization |
| covafillr | Local Polynomial Regression of State Dependent Covariates in State-Space Models |
| covatest | Tests on Properties of Space-Time Covariance Functions |
| covBM | Brownian Motion Processes for 'nlme'-Models |
| CovCombR | Combine Partial Covariance / Relationship Matrices |
| covdepGE | Covariate Dependent Graph Estimation |
| coveffectsplot | Produce Forest Plots to Visualize Covariate Effects |
| covequal | Test for Equality of Covariance Matrices |
| COveR | Clustering with Overlaps |
| coveR2 | Process Digital Cover Photography Images of Tree Crowns |
| covfefe | Covfefy Any Word, Sentence or Speech |
| covglasso | Sparse Covariance Matrix Estimation |
| COVID19 | R Interface to COVID-19 Data Hub |
| covid19.analytics | Load and Analyze Live Data from the COVID-19 Pandemic |
| covid19br | Brazilian COVID-19 Pandemic Data |
| covid19brazil | COVID-19 Dataset for Brazil |
| covid19dbcand | Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R Format |
| covid19france | Cases of COVID-19 in France |
| covid19india | Pulling Clean Data from Covid19india.org |
| covid19italy | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset |
| covid19sf | The Covid19 San Francisco Dataset |
| covid19srilanka | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Data in Sri Lanka |
| covid19swiss | COVID-19 Cases in Switzerland and Principality of Liechtenstein |
| covid19tunisia | Cases of COVID-19 in Tunisia |
| covid19us | Cases of COVID-19 in the United States |
| covidcast | Client for Delphi's 'COVIDcast Epidata' API |
| COVIDIBGE | Downloading, Reading and Analyzing PNAD COVID19 Microdata |
| CovidMutations | Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019) |
| covidmx | Descarga y analiza datos de COVID-19 en México |
| covidnor | Public COVID-19 Data for Norway |
| covidprobability | Estimate the Unit-Wide Probability of COVID-19 |
| covidsymptom | COVID Symptom Study Sweden Open Dataset |
| covKCD | Covariance Estimation for Matrix Data with the Kronecker-Core Decomposition |
| covr | Test Coverage for Packages |
| CovRegRF | Covariance Regression with Random Forests |
| covRobust | Robust Covariance Estimation via Nearest Neighbor Cleaning |
| CovSel | Model-Free Covariate Selection |
| covsep | Tests for Determining if the Covariance Structure of 2-Dimensional Data is Separable |
| covsim | VITA, IG and PLSIM Simulation for Given Covariance and Marginals |
| covTestR | Covariance Matrix Tests |
| CovTools | Statistical Tools for Covariance Analysis |
| covtracer | Contextualizing Tests |
| cowbell | Performs Segmented Linear Regression on Two Independent Variables |
| cowplot | Streamlined Plot Theme and Plot Annotations for 'ggplot2' |
| cowsay | Messages, Warnings, Strings with Ascii Animals |
| CoxAIPW | Doubly Robust Inference for Cox Marginal Structural Model with Informative Censoring |
| CoxBcv | Bias-Corrected Sandwich Variance Estimators for Marginal Cox Analysis of Cluster Randomized Trials |
| coxed | Duration-Based Quantities of Interest for the Cox Proportional Hazards Model |
| coxerr | Cox Regression with Dependent Error in Covariates |
| CoxICPen | Variable Selection for Cox's Model with Interval-Censored Data |
| coxme | Mixed Effects Cox Models |
| Coxmos | Cox MultiBlock Survival |
| coxphf | Cox Regression with Firth's Penalized Likelihood |
| coxphm | Time-to-Event Data Analysis with Missing Survival Times |
| coxphSGD | Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model |
| coxphw | Weighted Estimation in Cox Regression |
| CoxPlus | Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects |
| CoxR2 | R-Squared Measure Based on Partial LR Statistic, for the Cox PH Regression Model |
| coxrobust | Fit Robustly Proportional Hazards Regression Model |
| coxrt | Cox Proportional Hazards Regression for Right-Truncated Data |
| coxsei | Fitting a CoxSEI Model |
| CP | Conditional Power Calculations |
| cp4p | Calibration Plot for Proteomics |
| cpa | Confirmatory Path Analysis Through 'd-sep' Tests |
| CPAT | Change Point Analysis Tests |
| CPBayes | Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations |
| CPC | Implementation of Cluster-Polarization Coefficient |
| CPCAT | The Closure Principle Computational Approach Test |
| cPCG | Efficient and Customized Preconditioned Conjugate Gradient Method for Solving System of Linear Equations |
| cpd | Complex Pearson Distributions |
| CPE | Concordance Probability Estimates in Survival Analysis |
| cpfa | Classification with Parallel Factor Analysis |
| CpGassoc | Association Between Methylation and a Phenotype of Interest |
| CpGFilter | CpG Filtering Method Based on Intra-Class Correlation Coefficients |
| CPGLIB | Competing Proximal Gradients Library |
| cpi | Conditional Predictive Impact |
| cplm | Compound Poisson Linear Models |
| cplots | Plots for Circular Data |
| cpm | Sequential and Batch Change Detection Using Parametric and Nonparametric Methods |
| cpmBigData | Fitting Semiparametric Cumulative Probability Models for Big Data |
| CPMCGLM | Correction of the P-Value after Multiple Coding in Generalized Linear Models |
| CpmERCCutoff | Calculation of Log2 Counts per Million Cutoff from ERCC Controls |
| cpmr | Connectome Predictive Modelling in R |
| CPNCoverageAnalysis | Conceptual Properties Norming Studies as Parameter Estimation |
| cpop | Detection of Multiple Changes in Slope in Univariate Time-Series |
| CPoptim | Convex Partition Optimisation |
| CPP | Composition of Probabilistic Preferences (CPP) |
| cpp11 | A C++11 Interface for R's C Interface |
| cpp11armadillo | An 'Armadillo' Interface |
| cpp11eigen | An 'Eigen' Interface |
| cppcheckR | Check 'C' and 'C++' Files using 'Cppcheck' |
| cppcontainers | 'C++' Standard Template Library Containers |
| cppdoubles | Fast Relative Comparisons of Floating Point Numbers in 'C++' |
| cppRouting | Algorithms for Routing and Solving the Traffic Assignment Problem |
| cpr | Control Polygon Reduction |
| cprobit | Conditional Probit Model for Analysing Continuous Outcomes |
| cprr | Functions for Working with Danish CPR Numbers |
| cPseudoMaRg | Constructs a Correlated Pseudo-Marginal Sampler |
| cpsR | Load CPS Microdata into R Using the 'Census Bureau Data' API |
| cpss | Change-Point Detection by Sample-Splitting Methods |
| CPsurv | Nonparametric Change Point Estimation for Survival Data |
| cpsurvsim | Simulating Survival Data from Change-Point Hazard Distributions |
| cpsvote | A Toolbox for Using the CPS’s Voting and Registration Supplement |
| cpt | Classification Permutation Test |
| cptcity | 'cpt-city' Colour Gradients |
| CptNonPar | Nonparametric Change Point Detection for Multivariate Time Series |
| cqrReg | Quantile, Composite Quantile Regression and Regularized Versions |
| cquad | Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data |
| CR2 | Compute Cluster Robust Standard Errors with Degrees of Freedom Adjustments |
| CRABS | Congruent Rate Analyses in Birth-Death Scenarios |
| cragg | Tests for Weak Instruments in R |
| cramer | Multivariate Nonparametric Cramer-Test for the Two-Sample-Problem |
| crandep | Network Analysis of Dependencies of CRAN Packages |
| crank | Completing Ranks |
| cranlike | Tools for 'CRAN'-Like Repositories |
| cranlogs | Download Logs from the 'RStudio' 'CRAN' Mirror |
| cranly | Package Directives and Collaboration Networks in CRAN |
| CRANsearcher | RStudio Addin for Searching Packages in CRAN Database Based on Keywords |
| crassmat | Conditional Random Sampling Sparse Matrices |
| crawl | Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data |
| crayon | Colored Terminal Output |
| crayons | Color Palettes from Crayon Boxes |
| crc32c | Cyclic Redundancy Check with CPU-Specific Acceleration |
| crch | Censored Regression with Conditional Heteroscedasticity |
| crctStepdown | Univariate Analysis of Cluster Trials with Multiple Outcomes |
| CRE | Interpretable Discovery and Inference of Heterogeneous Treatment Effects |
| CREAM | Clustering of Genomic Regions Analysis Method |
| createLogicalPCM | Create Logical Pairwise Comparison Matrix for the Analytic Hierarchy Process |
| credentials | Tools for Managing SSH and Git Credentials |
| CRediTas | Generate CRediT Author Statements |
| creditmodel | Toolkit for Credit Modeling, Analysis and Visualization |
| CreditRisk | Evaluation of Credit Risk with Structural and Reduced Form Models |
| CREDS | Calibrated Ratio Estimator under Double Sampling Design |
| credsubs | Credible Subsets |
| credule | Credit Default Swap Functions |
| crew | A Distributed Worker Launcher Framework |
| crew.aws.batch | A Crew Launcher Plugin for AWS Batch |
| crew.cluster | Crew Launcher Plugins for Traditional High-Performance Computing Clusters |
| crfsuite | Conditional Random Fields for Labelling Sequential Data in Natural Language Processing |
| cricketdata | International Cricket Data |
| cricketr | Analyze Cricketers and Cricket Teams Based on ESPN Cricinfo Statsguru |
| crimCV | Group-Based Modelling of Longitudinal Data |
| crimedata | Access Crime Data from the Open Crime Database |
| crimeutils | A Comprehensive Set of Functions to Clean, Analyze, and Present Crime Data |
| crisp | Fits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way |
| crispRdesignR | Guide Sequence Design for CRISPR/Cas9 |
| criticality | Modeling Fissile Material Operations in Nuclear Facilities |
| criticalpath | An Implementation of the Critical Path Method |
| critpath | Setting the Critical Path in Project Management |
| CRM | Continual Reassessment Method (CRM) for Phase I Clinical Trials |
| crm12Comb | Phase I/II CRM Based Drug Combination Design |
| CRMetrics | Cell Ranger Output Filtering and Metrics Visualization |
| crmn | CCMN and Other Normalization Methods for Metabolomics Data |
| crmPack | Object-Oriented Implementation of CRM Designs |
| crmReg | Cellwise Robust M-Regression and SPADIMO |
| crochet | Implementation Helper for '[' and '[<-' of Custom Matrix-Like Types |
| cromwellDashboard | A Dashboard to Visualize Scientific Workflows in 'Cromwell' |
| Cronbach | Cronbach's Alpha |
| crone | Structural Crystallography in 1d |
| cronologia | Create an HTML Vertical Timeline from a Data Frame in 'rmarkdown' and 'shiny' |
| cronR | Schedule R Scripts and Processes with the 'cron' Job Scheduler |
| crop | Graphics Cropping Tool |
| cropcircles | Crops an Image to a Circle |
| cropdatape | Open Data of Agricultural Production of Crops of Peru |
| cropDemand | Spatial Crop Water Demand for Brazil |
| cropgrowdays | Crop Growing Degree Days and Agrometeorological Calculations |
| crops | Changepoints for a Range of Penalties (CROPS) |
| CropScapeR | Access Cropland Data Layer Data via the 'CropScape' Web Service |
| CropWaterBalance | Climate Water Balance for Irrigation Purposes |
| cropZoning | Climate Crop Zoning Based in Air Temperature for Brazil |
| CrossCarry | Analysis of Data from a Crossover Design with GEE |
| CrossClustering | A Partial Clustering Algorithm |
| crossdes | Construction of Crossover Designs |
| crosshap | Local Haplotype Clustering and Visualization |
| crosslag | Perform Linear or Nonlinear Cross Lag Analysis |
| crossmap | Apply Functions to All Combinations of List Elements |
| crossmatch | The Cross-Match Test |
| crossnma | Cross-Design & Cross-Format Network Meta-Analysis and Regression |
| Crossover | Analysis and Search of Crossover Designs |
| crossrun | Joint Distribution of Number of Crossings and Longest Run |
| crosstable | Crosstables for Descriptive Analyses |
| Crosstabs.Loglinear | Cross Tabulation and Loglinear Analyses of Categorical Data |
| crosstalk | Inter-Widget Interactivity for HTML Widgets |
| crosstalkr | Analysis of Graph-Structured Data with a Focus on Protein-Protein Interaction Networks |
| crossurr | Cross-Fitting for Doubly Robust Evaluation of High-Dimensional Surrogate Markers |
| CrossVA | Verbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms |
| crossval | Generic Functions for Cross Validation |
| CrossValidate | Classes and Methods for Cross Validation of "Class Prediction" Algorithms |
| crossvalidationCP | Cross-Validation for Change-Point Regression |
| crosswalkr | Rename and Encode Data Frames Using External Crosswalk Files |
| crossword.r | Generating Crosswords from Word Lists |
| crov | Constrained Regression Model for an Ordinal Response and Ordinal Predictors |
| crplyr | A 'dplyr' Interface for Crunch |
| crqa | Unidimensional and Multidimensional Methods for Recurrence Quantification Analysis |
| crrcbcv | Bias-Corrected Variance for Competing Risks Regression with Clustered Data |
| crrSC | Competing Risks Regression for Stratified and Clustered Data |
| crrstep | Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model |
| crs | Categorical Regression Splines |
| crseEventStudy | A Robust and Powerful Test of Abnormal Stock Returns in Long-Horizon Event Studies |
| crsmeta | Extract Coordinate System Metadata |
| crsnls | Nonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe' |
| crso | Cancer Rule Set Optimization ('crso') |
| crsra | Tidying and Analyzing 'Coursera' Research Export Data |
| crsuggest | Obtain Suggested Coordinate Reference System Information for Spatial Data |
| crt2power | Designing Cluster-Randomized Trials with Two Co-Primary Outcomes |
| CRTConjoint | Conditional Randomization Testing (CRT) Approach for Conjoint Analysis |
| CRTgeeDR | Doubly Robust Inverse Probability Weighted Augmented GEE Estimator |
| CRTSize | Sample Size Estimation Functions for Cluster Randomized Trials |
| CRTspat | Workflow for Cluster Randomised Trials with Spillover |
| crul | HTTP Client |
| crumble | Flexible and General Mediation Analysis Using Riesz Representers |
| crunch | Crunch.io Data Tools |
| crunchy | Shiny Apps on Crunch |
| cruts | Interface to Climatic Research Unit Time-Series Version 3.21 Data |
| CruzPlot | Plot Shipboard DAS Data |
| crwbmetareg | Cluster Robust Wild Bootstrap Meta Regression |
| CRWRM | Changing the Reference Group without Re-Running the Model |
| cry | Statistics for Structural Crystallography |
| crypto2 | Download Crypto Currency Data from 'CoinMarketCap' without 'API' |
| cryptography | Encrypts and Decrypts Text Ciphers |
| cryptoQuotes | Open Access to Cryptocurrency Market Data, Sentiment Indicators and Interactive Charts |
| cryptorng | Access System Cryptographic Pseudorandom Number Generators |
| cryptotrackr | An Interface to Crypto Data Sources |
| cryptoverse | Visualization and Analytics for the Cryptoverse |
| cryptowatchR | An API Wrapper for 'Cryptowatch' |
| CryptRndTest | Statistical Tests for Cryptographic Randomness |
| cryst | Calculate the Relative Crystallinity of Starch by XRD and FTIR |
| csa | A Cross-Scale Analysis Tool for Model-Observation Visualization and Integration |
| csalert | Alerts from Public Health Surveillance Data |
| csampling | Functions for Conditional Simulation in Regression-Scale Models |
| CsChange | Testing for Change in C-Statistic |
| csci | Current Status Confidence Intervals |
| CSclone | Bayesian Nonparametric Modeling in R |
| CSCNet | Fitting and Tuning Regularized Cause-Specific Cox Models with Elastic-Net Penalty |
| csdata | Structural Data for Norway |
| cSEM | Composite-Based Structural Equation Modeling |
| CSeqpat | Frequent Contiguous Sequential Pattern Mining of Text |
| CSESA | CRISPR-Based Salmonella Enterica Serotype Analyzer |
| CSGo | Collecting Counter Strike Global Offensive Data |
| cshapes | The CShapes 2.0 Dataset and Utilities |
| CSHShydRology | Canadian Hydrological Analyses |
| CSIndicators | Climate Services' Indicators Based on Sub-Seasonal to Decadal Predictions |
| csmaps | Preformatted Maps of Norway that Don't Need Geolibraries |
| CSMES | Cost-Sensitive Multi-Criteria Ensemble Selection for Uncertain Cost Conditions |
| csmpv | Biomarker Confirmation, Selection, Modelling, Prediction, and Validation |
| csn | Closed Skew-Normal Distribution |
| csodata | Download Data from the CSO 'PxStat' API |
| cspec | Complete Discrete Fourier Transform (DFT) and Periodogram |
| cspp | A Tool for the Correlates of State Policy Project Data |
| csppData | Data Only: The Correlates of State Policy Project Dataset |
| csquares | Concise Spatial Query and Representation System (c-Squares) |
| csranks | Statistical Tools for Ranks |
| cssTools | Cognitive Social Structure Tools |
| cstab | Selection of Number of Clusters via Normalized Clustering Instability |
| CSTE | Covariate Specific Treatment Effect (CSTE) Curve |
| cstidy | Helpful Functions for Cleaning Surveillance Data |
| cstime | Date and Time Functions for Public Health Purposes |
| CSTools | Assessing Skill of Climate Forecasts on Seasonal-to-Decadal Timescales |
| csurvey | Constrained Regression for Survey Data |
| csutil | Common Base-R Problems Relating to Lists |
| csv | Read and Write CSV Files with Selected Conventions |
| csvread | Fast Specialized CSV File Loader |
| csvwr | Read and Write CSV on the Web (CSVW) Tables and Metadata |
| csvy | Import and Export CSV Data with a YAML Metadata Header |
| cta | Contingency Table Analysis Based on ML Fitting of MPH Models |
| CTAShiny | Interactive Application for Working with Contingency Tables |
| ctbi | A Procedure to Clean, Decompose and Aggregate Timeseries |
| CTD | A Method for 'Connecting The Dots' in Weighted Graphs |
| ctf | Read and Write Column Text Format (CTF) |
| ctgdist | Likert Category Distance Calculator |
| ctgt | Closed Testing with Globaltest for Pathway Analysis |
| cthist | Clinical Trial Registry History |
| cthreshER | Continuous Threshold Expectile Regression |
| ctl | Correlated Trait Locus Mapping |
| CTM | A Text Mining Toolkit for Chinese Document |
| ctmcd | Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data |
| ctmcmove | Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains |
| cTMed | Continuous Time Mediation |
| ctmle | Collaborative Targeted Maximum Likelihood Estimation |
| ctmm | Continuous-Time Movement Modeling |
| ctmva | Continuous-Time Multivariate Analysis |
| CTNote | CTN Outcomes, Treatments, and Endpoints |
| cTOST | Finite Sample Correction of the Two One-Sided Tests in the Univariate Framework |
| ctpm | Continuous-Time Phylogenetic Modeling |
| ctqr | Censored and Truncated Quantile Regression |
| ctrdata | Retrieve and Analyze Clinical Trials in Public Registers |
| ctrialsgov | Query Data from U.S. National Library of Medicine's Clinical Trials Database |
| CTRing | Density Profiles of Wood from CT Scan Images |
| ctrlGene | Assess the Stability of Candidate Housekeeping Genes |
| ctsem | Continuous Time Structural Equation Modelling |
| ctsemOMX | Continuous Time SEM - 'OpenMx' Based Functions |
| ctsfeatures | Analyzing Categorical Time Series |
| CTShiny | Interactive Document for Working with Classification Tree Analysis |
| CTShiny2 | Interactive Document for Working with Classification Tree Analysis |
| CTT | Classical Test Theory Functions |
| CTTinShiny | Shiny Interface for the CTT Package |
| CTTShiny | Classical Test Theory via Shiny |
| ctv | CRAN Task Views |
| CTxCC | Multivariate Normal Mean Monitoring Through Critical-to-X Control Chart |
| ctxR | Utilities for Interacting with the 'CTX' APIs |
| ctypesio | Read and Write Standard C Types from Files, Connections and Raw Vectors |
| cuadramelo | Matrix Balancing and Rounding |
| CUB | A Class of Mixture Models for Ordinal Data |
| cubar | Codon Usage Bias Analysis |
| cubature | Adaptive Multivariate Integration over Hypercubes |
| cubble | A Vector Spatio-Temporal Data Structure for Data Analysis |
| cubelyr | A Data Cube 'dplyr' Backend |
| cubeview | View 3D Raster Cubes Interactively |
| cubfits | Codon Usage Bias Fits |
| cubicBsplines | Computation of a Cubic B-Spline Basis and Its Derivatives |
| cubing | Rubik's Cube Solving |
| Cubist | Rule- And Instance-Based Regression Modeling |
| cucumber | Behavior-Driven Development for R |
| cuda.ml | R Interface for the RAPIDS cuML Suite of Libraries |
| CUFF | Charles's Utility Function using Formula |
| cultevo | Tools, Measures and Statistical Tests for Cultural Evolution |
| CUMP | Analyze Multivariate Phenotypes by Combining Univariate Results |
| cumprinc | Functions Centered Around Microsoft Excel Cumprinc Function |
| cumSeg | Change Point Detection in Genomic Sequences |
| cumstats | Cumulative Descriptive Statistics |
| cumulcalib | Cumulative Calibration Assessment for Prediction Models |
| cumulocityr | Client for the 'Cumulocity' API |
| cuperdec | Cumulative Percent Decay Curve Generator |
| cuRe | Parametric Cure Model Estimation |
| CureAuxSP | Mixture Cure Models with Auxiliary Subgroup Survival Probabilities |
| CureDepCens | Dependent Censoring Regression Models with Cure Fraction |
| curephEM | NPMLE for Logistic-Cox Cure-Rate Model |
| cureplots | CURE (Cumulative Residual) Plots |
| curesurv | Mixture and Non Mixture Parametric Cure Models to Estimate Cure Indicators |
| curl | A Modern and Flexible Web Client for R |
| currencyapi | Client for the 'currencyapi.com' Currency Conversion API |
| currentSurvival | Estimation of CCI and CLFS Functions |
| CurricularAnalytics | Exploring and Analyzing Academic Curricula |
| currr | Apply Mapping Functions in Frequent Saving |
| curry | Partial Function Application with %<%, %-<%, and %><% |
| cursr | Cursor and Terminal Manipulation |
| curstatCI | Confidence Intervals for the Current Status Model |
| curtailment | Finds Binary Outcome Designs Using Stochastic Curtailment |
| curvecomp | Multiple Curve Comparisons Using Parametric Bootstrap |
| curveDepth | Tukey Curve Depth and Distance in the Space of Curves |
| curvHDR | Filtering of Flow Cytometry Samples |
| curvir | Specify Reserve Demand Curves |
| cusp | Cusp-Catastrophe Model Fitting Using Maximum Likelihood |
| custom.gauss.quad | Custom Made Gauss Quadrature Nodes and Weights |
| CustomDerivative | Pricing Various Types of Custom Derivatives |
| CustomerScoringMetrics | Evaluation Metrics for Customer Scoring Models Depending on Binary Classifiers |
| customiser | Use R Markdown to Write your "Rprofile" |
| customizedTraining | Customized Training for Lasso and Elastic-Net Regularized Generalized Linear Models |
| CustosAscensor | Costs Allocation for the Installation of an Elevator |
| cusum | Cumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance |
| cusumcharter | Easier CUSUM Control Charts |
| CUSUMdesign | Compute Decision Interval and Average Run Length for CUSUM Charts |
| cutoff | Seek the Significant Cutoff Value |
| cutpointr | Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks |
| CutpointsOEHR | Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model |
| cv | Cross-Validating Regression Models |
| cvap | Citizen Voting Age Population |
| cvar | Compute Expected Shortfall and Value at Risk for Continuous Distributions |
| cvasi | Calibration, Validation, and Simulation of TKTD Models |
| cvAUC | Cross-Validated Area Under the ROC Curve Confidence Intervals |
| cvCovEst | Cross-Validated Covariance Matrix Estimation |
| cvcrand | Efficient Design and Analysis of Cluster Randomized Trials |
| CVD | Color Vision Deficiencies |
| cvdprevent | Wrapper for the 'CVD Prevent' Application Programming Interface |
| cvequality | Tests for the Equality of Coefficients of Variation from Multiple Groups |
| cvGEE | Cross-Validated Predictions from GEE |
| CVglasso | Lasso Penalized Precision Matrix Estimation |
| cvLM | Cross-Validation for Linear & Ridge Regression Models |
| cvmaPLFAM | Cross-Validation Model Averaging for Partial Linear Functional Additive Models |
| cvmdisc | Cramer von Mises Tests for Discrete or Grouped Distributions |
| cvmgof | Cramer-von Mises Goodness-of-Fit Tests |
| CvmortalityMult | Cross-Validation for Multi-Population Mortality Models |
| cvms | Cross-Validation for Model Selection |
| CVR | Canonical Variate Regression |
| CVrisk | Compute Risk Scores for Cardiovascular Diseases |
| cvsem | SEM Model Comparison with K-Fold Cross-Validation |
| CVST | Fast Cross-Validation via Sequential Testing |
| CVThresh | Level-Dependent Cross-Validation Thresholding |
| cvTools | Cross-Validation Tools for Regression Models |
| cvwrapr | Tools for Cross Validation |
| CVXR | Disciplined Convex Optimization |
| cwot | Cauchy Weighted Joint Test for Pharmacogenetics Analysis |
| CWT | Continuous Wavelet Transformation for Spectroscopy |
| cxhull | Convex Hull |
| cxr | A Toolbox for Modelling Species Coexistence in R |
| cxxfunplus | Extend 'cxxfunction' by Saving the Dynamic Shared Objects |
| cycleRtools | Tools for Cycling Data Analysis |
| cyclestreets | Cycle Routing and Data for Cycling Advocacy |
| cyclocomp | Cyclomatic Complexity of R Code |
| cycloids | Tools for Calculating Hypocycloids, Epicycloids, Hypotrochoids, and Epitrochoids |
| cyclomort | Survival Modeling with a Periodic Hazard Function |
| Cyclops | Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis |
| cyclotomic | The Field of Cyclotomic Numbers |
| cyjShiny | Cytoscape.js Shiny Widget (cyjShiny) |
| cylcop | Circular-Linear Copulas with Angular Symmetry for Movement Data |
| cymruservices | Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services |
| cyphr | High Level Encryption Wrappers |
| cystiSim | Agent-Based Model for Taenia_solium Transmission and Control |
| CytobankAPI | Cytobank API Wrapper for R |
| cytofan | Plot Fan Plots for Cytometry Data using 'ggplot2' |
| cytometree | Automated Cytometry Gating and Annotation |
| cytominer | Methods for Image-Based Cell Profiling |
| CytOpT | Optimal Transport for Gating Transfer in Cytometry Data with Domain Adaptation |
| CytoSimplex | Simplex Visualization of Cell Fate Similarity in Single-Cell Data |
| czechrates | Czech Interest & Foreign Exchange Rates |
| czso | Use Open Data from the Czech Statistical Office in R |
| D2MCS | Data Driving Multiple Classifier System |
| D3GB | Interactive Genome Browser |
| D3mirt | Descriptive 3D Multidimensional Item Response Theory Modelling |
| d3Network | Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R |
| D3partitionR | Interactive Charts of Nested and Hierarchical Data with 'D3.js' |
| d3plus | Seamless 'D3Plus' Integration |
| d3po | Fast and Beautiful Interactive Visualization for 'Markdown' and 'Shiny' |
| d3r | 'd3.js' Utilities for R |
| d3Tree | Create Interactive Collapsible Trees with the JavaScript 'D3' Library |
| d4storagehub4R | Interface to 'D4Science' 'StorageHub' API |
| D4TAlink.light | FAIR Data - Workflow Management |
| DA | Discriminant Analysis for Evolutionary Inference |
| DAAG | Data Analysis and Graphics Data and Functions |
| DAAGbio | Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences |
| daarem | Damped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms |
| dabestr | Data Analysis using Bootstrap-Coupled Estimation |
| dabr | Database Management with R |
| dacc | Detection and Attribution Analysis of Climate Change |
| DACF | Data Analysis with Ceiling and/or Floor Data |
| dad | Three-Way / Multigroup Data Analysis Through Densities |
| dadjoke | Displays a Dad Joke |
| dadjokeapi | Return a Random Dad Joke |
| dados | Translate Datasets to Portuguese |
| dae | Functions Useful in the Design and ANOVA of Experiments |
| daewr | Design and Analysis of Experiments with R |
| daff | Diff, Patch and Merge for Data.frames |
| dafishr | Download, Wrangle, and Analyse Vessel Monitoring System Data |
| dafs | Data Analysis for Forensic Scientists |
| dagirlite | Spatial Vector Data for Danmarks Administrative Geografiske Inddeling DAGI |
| dagitty | Graphical Analysis of Structural Causal Models |
| dagR | Directed Acyclic Graphs: Analysis and Data Simulation |
| dagwood | DAGs with Omitted Objects Displayed (DAGWOOD) |
| dail | Data from Access to Information Law |
| DAIME | Effects of Changing Deposition Rates |
| daiquiri | Data Quality Reporting for Temporal Datasets |
| daiR | Interface with Google Cloud Document AI API |
| DAISIE | Dynamical Assembly of Islands by Speciation, Immigration and Extinction |
| DAISIEprep | Extracts Phylogenetic Island Community Data from Phylogenetic Trees |
| DAKS | Data Analysis and Knowledge Spaces |
| DALEX | moDel Agnostic Language for Exploration and eXplanation |
| DALEXtra | Extension for 'DALEX' Package |
| DALSM | Nonparametric Double Additive Location-Scale Model (DALSM) |
| daltoolbox | Leveraging Experiment Lines to Data Analytics |
| daltoolboxdp | Data Pre-Processing Extensions |
| DALY | The DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R |
| dam | Data Analysis Metabolomics |
| damAOI | Create an 'Area of Interest' Around a Constructed Dam for Comparative Impact Evaluations |
| DamiaNN | Neural Network Numerai |
| DAMOCLES | Dynamic Assembly Model of Colonization, Local Extinction and Speciation |
| dampack | Decision-Analytic Modeling Package |
| damr | Interface to Drosophila Activity Monitor System Result Files |
| dams | Dams in the United States from the National Inventory of Dams (NID) |
| DandEFA | Dandelion Plot for R-Mode Exploratory Factor Analysis |
| dang | 'Dang' Associated New Goodies |
| dani | Design and Analysis of Non-Inferiority Trials |
| DanielBiostatistics10th | Functions for Wayne W. Daniel's Biostatistics, Tenth Edition |
| dann | Discriminant Adaptive Nearest Neighbor Classification |
| danstat | R Client for the Statistics Denmark Databank API |
| dapper | Data Augmentation for Private Posterior Estimation |
| daqapo | Data Quality Assessment for Process-Oriented Data |
| DArand | Differential Analysis with Random Reference Genes |
| Dark | The Analysis of Dark Adaptation Data |
| DarkDiv | Estimating Dark Diversity and Site-Specific Species Pools |
| darksky | Tools to Work with the 'Dark Sky' 'API' |
| dartR | Importing and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis |
| dartR.base | Analysing 'SNP' and 'Silicodart' Data - Basic Functions |
| dartR.captive | Analysing 'SNP' Data to Support Captive Breeding |
| dartR.data | Auxiliary Data Package for Our Main Package 'dartR' |
| dartR.popgen | Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis |
| dartR.sexlinked | Analysing SNP Data to Identify Sex-Linked Markers |
| dartR.sim | Computer Simulations of 'SNP' Data |
| dartR.spatial | Applying Landscape Genomic Methods on 'SNP' and 'Silicodart' Data |
| dartRverse | Install and Load the 'dartRverse' Suits of Packages |
| dashboardthemes | Customise the Appearance of 'shinydashboard' Applications using Themes |
| Dasst | Tools for Reading, Processing and Writing 'DSSAT' Files |
| dat | Tools for Data Manipulation |
| data.table | Extension of 'data.frame' |
| data.table.threads | Analyze Multi-Threading Performance for 'data.table' Functions |
| data.tree | General Purpose Hierarchical Data Structure |
| data.validator | Automatic Data Validation and Reporting |
| data360r | Wrapper for 'TCdata360' and 'Govdata360' API |
| DatabaseConnector | Connecting to Various Database Platforms |
| DatabaseConnectorJars | JAR Dependencies for the 'DatabaseConnector' Package |
| DatabionicSwarm | Swarm Intelligence for Self-Organized Clustering |
| databraryr | Interact with the 'Databrary.org' API |
| dataclass | Easily Create Structured Lists or Data Frames with Input Validation |
| DataClean | Data Cleaning |
| datacleanr | Interactive and Reproducible Data Cleaning |
| DataCombine | Tools for Easily Combining and Cleaning Data Sets |
| dataCompare | A 'shiny' App to Compare Two Data Frames |
| dataCompareR | Compare Two Data Frames and Summarise the Difference |
| datacutr | SDTM Datacut |
| datadictionary | Create a Data Dictionary |
| datadogr | R Client for 'Datadog' API |
| datadriftR | Concept Drift Detection Methods for Stream Data |
| DataEditR | An Interactive Editor for Viewing, Entering, Filtering & Editing Data |
| DataExplorer | Automate Data Exploration and Treatment |
| DataFakeR | Generate Fake Data for Relational Databases |
| dataframeexplorer | Familiarity with Dataframes Before Data Manipulation |
| datafsm | Estimating Finite State Machine Models from Data |
| DataGraph | Export Data from 'R' to 'DataGraph' |
| DataLoader | Import Multiple File Types |
| dataMaid | A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process |
| dataMeta | Create and Append a Data Dictionary for an R Dataset |
| DataMetProcess | Meteorological Data Processing |
| datamods | Modules to Import and Manipulate Data in 'Shiny' |
| dataMojo | Reshape Data Table |
| datana | Datasets and Functions to Accompany Analisis De Datos Con R |
| datanugget | Create, and Refine Data Nuggets |
| dataonderivatives | Easily Source Publicly Available Data on Derivatives |
| dataone | R Interface to the DataONE REST API |
| datapack | A Flexible Container to Transport and Manipulate Data and Associated Resources |
| DataPackageR | Construct Reproducible Analytic Data Sets as R Packages |
| datapasta | R Tools for Data Copy-Pasta |
| dataprep | Efficient and Flexible Data Preprocessing Tools |
| dataPreparation | Automated Data Preparation |
| dataquieR | Data Quality in Epidemiological Research |
| datardis | Data from the Doctor Who Series |
| dataReporter | Reproducible Data Screening Checks and Report of Possible Errors |
| dataresqc | C3S Quality Control Tools for Historical Climate Data |
| dataRetrieval | Retrieval Functions for USGS and EPA Hydrology and Water Quality Data |
| datarium | Data Bank for Statistical Analysis and Visualization |
| datarobot | 'DataRobot' Predictive Modeling API |
| datasailr | Row by Row Data Processing Tool, Using 'DataSailr' Script |
| datasauRus | Datasets from the Datasaurus Dozen |
| dataSDA | Data Sets for Symbolic Data Analysis |
| dataseries | Switzerland's Data Series in One Place |
| datasetjson | Read and Write CDISC Dataset JSON Files |
| datasets.load | Graphical Interface for Loading Datasets |
| datasetsICR | Datasets from the Book "An Introduction to Clustering with R" |
| DataSetsUni | A Collection of Univariate Data Sets |
| DataSpaceR | Interface to 'the CAVD DataSpace' |
| dataspice | Create Lightweight Schema.org Descriptions of Data |
| DatAssim | Data Assimilation |
| datastepr | An Implementation of a SAS-Style Data Step |
| DatastreamDSWS2R | Provides a Link Between the 'LSEG Datastream' System and R |
| DatastreamR | Datastream API |
| DATAstudio | The Research Data Warehouse of Miguel de Carvalho |
| DataSum | Comprehensive Data Summarization for Statistical Analysis |
| dataverifyr | A Lightweight, Flexible, and Fast Data Validation Package that Can Handle All Sizes of Data |
| dataverse | Client for Dataverse 4+ Repositories |
| DataVisualizations | Visualizations of High-Dimensional Data |
| DataViz | Data Visualisation Using an HTML Page and 'D3.js' |
| datawizard | Easy Data Wrangling and Statistical Transformations |
| datazoom.amazonia | Simplify Access to Data from the Amazon Region |
| date | Functions for Handling Dates |
| dateback | Collect and Install R Packages on a Specified Date with Dependencies |
| datefixR | Standardize Dates in Different Formats or with Missing Data |
| daterangepicker | Create a Shiny Date-Range Input |
| datetime | Nominal Dates, Times, and Durations |
| datetimeoffset | Datetimes with Optional UTC Offsets and/or Heterogeneous Time Zones |
| DateTimeRangePicker | A Datetime Range Picker Widget for Usage in 'Shiny' Applications |
| datetimeutils | Utilities for Dates and Times |
| datetoiso | Modify Dates to ISO Standard ("International Organization for Standardization") |
| dateutils | Date Utils |
| datoramar | Interface to the 'Datorama' API |
| datos | Traduce al Español Varios Conjuntos de Datos de Práctica |
| datplot | Preparation of Object Dating Ranges for Density Plots (Aoristic Analysis) |
| datr | 'Dat' Protocol Interface |
| datrProfile | Column Profile for Tables and Datasets |
| dauphin | Compact Standard for Australian Phone Numbers |
| Davies | The Davies Quantile Function |
| dawai | Discriminant Analysis with Additional Information |
| dawaR | An API Wrapper for 'DAWA' - 'The Danish Address Web API' |
| daymetr | Interface to the 'Daymet' Web Services |
| daySupply | Calculating Days' Supply and Daily Dose of Prescriptions |
| dbacf | Autocovariance Estimation via Difference-Based Methods |
| dbarts | Discrete Bayesian Additive Regression Trees Sampler |
| dbcsp | Distance-Based Common Spatial Patterns |
| dbd | Discretised Beta Distribution |
| DBEST | Detecting Breakpoints and Estimating Segments in Trend |
| DBfit | A Double Bootstrap Method for Analyzing Linear Models with Autoregressive Errors |
| dbflobr | Read and Write Files to SQLite Databases |
| dbGaPCheckup | dbGaP Checkup |
| dbglm | Generalised Linear Models by Subsampling and One-Step Polishing |
| DBHC | Sequence Clustering with Discrete-Output HMMs |
| dbhydroR | 'DBHYDRO' Hydrologic and Water Quality Data |
| DBI | R Database Interface |
| DBItest | Testing DBI Backends |
| dblcens | Compute the NPMLE of Distribution Function from Doubly Censored Data, Plus the Empirical Likelihood Ratio for F(T) |
| dBlockmodeling | Deterministic Blockmodeling of Signed, One-Mode and Two-Mode Networks |
| dblr | Discrete Boosting Logistic Regression |
| dbMC | Confidence Interval for Matrix Completion via De-Biased Estimator |
| DBModelSelect | Distribution-Based Model Selection |
| dbmss | Distance-Based Measures of Spatial Structures |
| dbnlearn | Dynamic Bayesian Network Structure Learning, Parameter Learning and Forecasting |
| DBNMFrank | Rank Selection for Non-Negative Matrix Factorization |
| dbnR | Dynamic Bayesian Network Learning and Inference |
| dbparser | Drugs Databases Parser |
| dbplot | Simplifies Plotting Data Inside Databases |
| dbplyr | A 'dplyr' Back End for Databases |
| DBpower | Finite Sample Power Calculations for Detection Boundary Tests |
| DBR | Discrete Beta Regression |
| dbscan | Density-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms |
| dbstats | Distance-Based Statistics |
| DBTC | Dada-BLAST-Taxon Assign-Condense Metabarcode Analysis |
| DBTCShiny | Dada-BLAST-Taxon Assign-Condense Metabarcode Analysis 'shiny' Application |
| dbw | Doubly Robust Distribution Balancing Weighting Estimation |
| dbWebForms | Produce R Functions to Create HTML Forms Based on SQL Meta Data |
| dbx | A Fast, Easy-to-Use Database Interface |
| dc3net | Inferring Condition-Specific Networks via Differential Network Inference |
| DCCA | Detrended Fluctuation and Detrended Cross-Correlation Analysis |
| DCchoice | Analyzing Dichotomous Choice Contingent Valuation Data |
| dccmidas | DCC Models with GARCH and GARCH-MIDAS Specifications in the Univariate Step, RiskMetrics, Moving Covariance and Scalar and Diagonal BEKK Models |
| dccpp | Fast Computation of Distance Correlations |
| DCEM | Clustering Big Data using Expectation Maximization Star (EM*) Algorithm |
| DCEmgmt | DCE Data Reshaping and Processing |
| DCEtool | Efficient and Accessible Discrete Choice Experiments |
| DCG | Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis |
| DChaos | Chaotic Time Series Analysis |
| dChipIO | Methods for Reading dChip Files |
| dcifer | Genetic Relatedness Between Polyclonal Infections |
| DCL | Claims Reserving under the Double Chain Ladder Model |
| DCLEAR | Distance Based Cell Lineage Reconstruction |
| dclone | Data Cloning and MCMC Tools for Maximum Likelihood Methods |
| dclust | Divisive Hierarchical Clustering |
| DCluster | Functions for the Detection of Spatial Clusters of Diseases |
| DClusterm | Model-Based Detection of Disease Clusters |
| dcm2 | Calculating the M2 Model Fit Statistic for Diagnostic Classification Models |
| dcmle | Hierarchical Models Made Easy with Data Cloning |
| dcmodify | Modify Data Using Externally Defined Modification Rules |
| DCODE | List Linear n-Peptide Constraints for Overlapping Protein Regions |
| dcortools | Providing Fast and Flexible Functions for Distance Correlation Analysis |
| dcorVS | Variable Selection Algorithms Using the Distance Correlation |
| dcov | A Fast Implementation of Distance Covariance |
| dCovTS | Distance Covariance and Correlation for Time Series Analysis |
| DCPO | Dynamic Comparative Public Opinion |
| DCSmooth | Nonparametric Regression and Bandwidth Selection for Spatial Models |
| dcTensor | Discrete Matrix/Tensor Decomposition |
| dCUR | Dimension Reduction with Dynamic CUR |
| dcurver | Utility Functions for Davidian Curves |
| dcurves | Decision Curve Analysis for Model Evaluation |
| ddalpha | Depth-Based Classification and Calculation of Data Depth |
| ddc | Distance Density Clustering Algorithm |
| DDD | Diversity-Dependent Diversification |
| dde | Solve Delay Differential Equations |
| ddecompose | Detailed Distributional Decomposition |
| DDHFm | Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays) |
| ddi | The Data Defect Index for Samples that May not be IID |
| ddiv | Data Driven I-v Feature Extraction |
| DDIwR | DDI with R |
| DDL | Doubly Debiased Lasso (DDL) |
| DDM | Death Registration Coverage Estimation |
| ddml | Double/Debiased Machine Learning |
| DDoutlier | Distance & Density-Based Outlier Detection |
| ddp | Desirable Dietary Pattern |
| ddpca | Diagonally Dominant Principal Component Analysis |
| ddpcr | Analysis and Visualization of Droplet Digital PCR in R and on the Web |
| ddplot | Create D3 Based SVG Graphics |
| DDPM | Data Sets for Discrete Probability Models |
| DDPNA | Disease-Drived Differential Proteins Co-Expression Network Analysis |
| DDRTree | Learning Principal Graphs with DDRTree |
| ddsPLS | Data-Driven Sparse Partial Least Squares |
| ddst | Data Driven Smooth Tests |
| ddtlcm | Latent Class Analysis with Dirichlet Diffusion Tree Process Prior |
| deadband | Statistical Deadband Algorithms Comparison |
| deal | Learning Bayesian Networks with Mixed Variables |
| deaR | Conventional and Fuzzy Data Envelopment Analysis |
| debar | A Post-Clustering Denoiser for COI-5P Barcode Data |
| DEBBI | Differential Evolution-Based Bayesian Inference |
| debest | Duration Estimation for Biomarker Enrichment Studies and Trials |
| DebiasInfer | Efficient Inference on High-Dimensional Linear Model with Missing Outcomes |
| deBif | Bifurcation Analysis of Ordinary Differential Equation Systems |
| deBInfer | Bayesian Inference for Differential Equations |
| debkeepr | Analysis of Non-Decimal Currencies and Double-Entry Bookkeeping |
| DeBoinR | Box-Plots and Outlier Detection for Probability Density Functions |
| debugme | Debug R Packages |
| debugr | Debug Tool to Watch Objects/Expressions While Running an R Script |
| DeCAFS | Detecting Changes in Autocorrelated and Fluctuating Signals |
| DECIDE | DEComposition of Indirect and Direct Effects |
| decido | Bindings for 'Mapbox' Ear Cutting Triangulation Library |
| decision | Statistical Decision Analysis |
| decisionSupport | Quantitative Support of Decision Making under Uncertainty |
| deckgl | An R Interface to 'deck.gl' |
| declared | Functions for Declared Missing Values |
| DeclareDesign | Declare and Diagnose Research Designs |
| decode | Differential Co-Expression and Differential Expression Analysis |
| decoder | Decode Coded Variables to Plain Text and the Other Way Around |
| decompDL | Decomposition Based Deep Learning Models for Time Series Forecasting |
| decomposedPSF | Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD) |
| DecomposeR | Empirical Mode Decomposition for Cyclostratigraphy |
| decompr | Global Value Chain Decomposition |
| deconvolveR | Empirical Bayes Estimation Strategies |
| decor | Retrieve Code Decorations |
| DecorateR | Fit and Deploy DECORATE Trees |
| decorators | Extend the Behaviour of a Function without Explicitly Modifying it |
| decp | Complete Change Point Analysis |
| Deducer | A Data Analysis GUI for R |
| deducorrect | Deductive Correction, Deductive Imputation, and Deterministic Correction |
| deductive | Data Correction and Imputation Using Deductive Methods |
| DeductiveR | Deductive Rational Method |
| deduped | Making "Deduplicated" Functions |
| dedupewider | Deduplication Across Multiple Columns |
| deep | A Neural Networks Framework |
| deepdep | Visualise and Explore the Deep Dependencies of R Packages |
| deepdive | Deep Learning for General Purpose |
| deepgmm | Deep Gaussian Mixture Models |
| deepgp | Bayesian Deep Gaussian Processes using MCMC |
| DeepLearningCausal | Causal Inference with Super Learner and Deep Neural Networks |
| deeplr | Interface to the 'DeepL' Translation API |
| deepMOU | Clustering of Short Texts by Mixture of Unigrams and Its Deep Extensions |
| deepnet | Deep Learning Toolkit in R |
| deepNN | Deep Learning |
| deepredeff | Deep Learning Prediction of Effectors |
| deepregression | Fitting Deep Distributional Regression |
| deepRstudio | Seamless Language Translation in 'RStudio' using 'DeepL' API and 'Rstudioapi' |
| deeptime | Plotting Tools for Anyone Working in Deep Time |
| deeptimedata | Geologic Pattern Data from FGDC Used in 'deeptime' |
| deeptrafo | Fitting Deep Conditional Transformation Models |
| DEET | Differential Expression Enrichment Tool |
| DEEVD | Density Estimation by Extreme Value Distributions |
| default | Change the Default Arguments in R Functions |
| defineOptions | Define and Parse Command Line Options |
| defineR | Creates Define XML Documents |
| deFit | Fitting Differential Equations to Time Series Data |
| deflateBR | Deflate Nominal Brazilian Reais |
| deflist | Deferred List - A Read-Only List-Like Object with Deferred Access |
| deforestable | Classify RGB Images into Forest or Non-Forest |
| deform | Spatial Deformation and Dimension Expansion Gaussian Processes |
| deformula | Integration of One-Dimensional Functions with Double Exponential Formulas |
| degday | Compute Degree Days |
| DEGRE | Inferring Differentially Expressed Genes using Generalized Linear Mixed Models |
| degreenet | Models for Skewed Count Distributions Relevant to Networks |
| degross | Density Estimation from GROuped Summary Statistics |
| DEHOGT | Differentially Expressed Heterogeneous Overdispersion Gene Test for Count Data |
| deident | Persistent Data Anonymization Pipeline |
| dejaVu | Multiple Imputation for Recurrent Events |
| Delaporte | Statistical Functions for the Delaporte Distribution |
| delayed | A Framework for Parallelizing Dependent Tasks |
| DelayedEffect.Design | Sample Size and Power Calculations using the APPLE, SEPPLE, APPLE+ and SEPPLE+ Methods |
| deldir | Delaunay Triangulation and Dirichlet (Voronoi) Tessellation |
| Delta | Measure of Agreement Between Two Raters |
| deltaccd | Quantify Rhythmic Gene Co-Expression Relative to a Reference |
| DeltaMAN | Delta Measurement of Agreement for Nominal Data |
| deltaPlotR | Identification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method |
| DELTD | Kernel Density Estimation using Lifetime Distributions |
| DEM | The Distributed EM Algorithms in Multivariate Gaussian Mixture Models |
| dematel | Decision Making Trial and Evaluation Laboratory Technique in R |
| demic | Dynamic Estimator of Microbial Communities |
| deming | Deming, Theil-Sen, Passing-Bablock and Total Least Squares Regression |
| DemoDecomp | Decompose Demographic Functions |
| demodelr | Simulating Differential Equations with Data |
| demogR | Analysis of Age-Structured Demographic Models |
| DemografixeR | Extrapolate Gender, Age and Nationality of a Name |
| demoGraphic | Providing Demographic Table with the P-Value, Standardized Mean Difference Value |
| DemographicTable | Creating Demographic Table |
| demography | Forecasting Mortality, Fertility, Migration and Population Data |
| demoKde | Kernel Density Estimation for Demonstration Purposes |
| DemoKin | Estimate Population Kin Distribution |
| demoShiny | Runs a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps |
| DEMOVA | DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set |
| demu | Optimal Design Emulators via Point Processes |
| dendextend | Extending 'dendrogram' Functionality in R |
| dendRoAnalyst | A Tool for Processing and Analyzing Dendrometer Data |
| dendroextras | Extra Functions to Cut, Label and Colour Dendrogram Clusters |
| dendrometeR | Analyzing Dendrometer Data |
| dendrometry | Forest Estimations and Dendrometric Computations |
| dendroNetwork | Create Networks of Dendrochronological Series using Pairwise Similarity |
| DendroSync | A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies |
| dendroTools | Linear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data |
| DendSer | Dendrogram Seriation: Ordering for Visualisation |
| dendsort | Modular Leaf Ordering Methods for Dendrogram Nodes |
| denguedatahub | A Tidy Format Datasets of Dengue by Country |
| denim | Generate and Simulate Deterministic Discrete-Time Compartmental Models |
| denoiSeq | Differential Expression Analysis Using a Bottom-Up Model |
| denoiseR | Regularized Low Rank Matrix Estimation |
| denovolyzeR | Statistical Analyses of De Novo Genetic Variants |
| denseFLMM | Functional Linear Mixed Models for Densely Sampled Data |
| densEstBayes | Density Estimation via Bayesian Inference Engines |
| densitr | Analysing Density Profiles from Resistance Drilling of Trees |
| densityarea | Polygons of Bivariate Density Distributions |
| densityClust | Clustering by Fast Search and Find of Density Peaks |
| DensParcorr | Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks |
| densratio | Density Ratio Estimation |
| denstrip | Density Strips and Other Methods for Compactly Illustrating Distributions |
| denvax | Simple Dengue Test and Vaccinate Cost Thresholds |
| DEoptim | Global Optimization by Differential Evolution |
| DEoptimR | Differential Evolution Optimization in Pure R |
| depcache | Cache R Expressions, Taking Their Dependencies into Account |
| DepCens | Dependent Censoring Regression Models |
| depCensoring | Statistical Methods for Survival Data with Dependent Censoring |
| depcoeff | Dependency Coefficients |
| depend.truncation | Statistical Methods for the Analysis of Dependently Truncated Data |
| depigner | A Utility Package to Help you Deal with "Pignas" |
| DepLogo | Dependency Logo |
| DEploid | Deconvolute Mixed Genomes with Unknown Proportions |
| depmixS4 | Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4 |
| DEPONS2R | Read, Plot and Analyse Output from the DEPONS Model |
| deps | Dependency Management with 'roxygen'-Style Comments |
| depth.plot | Multivariate Analogy of Quantiles |
| DepthProc | Statistical Depth Functions for Multivariate Analysis |
| depthTools | Depth Tools Package |
| DeRezende.Ferreira | Zero Coupon Yield Curve Modelling |
| Deriv | Symbolic Differentiation |
| derivmkts | Functions and R Code to Accompany Derivatives Markets |
| DES | Discrete Event Simulation |
| desc | Manipulate DESCRIPTION Files |
| descomponer | Seasonal Adjustment by Frequency Analysis |
| descr | Descriptive Statistics |
| describedata | Miscellaneous Descriptive Functions |
| DescribeDF | Description of a Data Frame |
| DescribeDisplay | An Interface to the 'DescribeDisplay' 'GGobi' Plugin |
| describer | Describe Data in R Using Common Descriptive Statistics |
| descriptio | Descriptive Statistical Analysis |
| DescriptiveRepresentationCalculator | Descriptive Representation Calculator: Characterizing Observed and Expected Representation |
| DescriptiveStats.OBeu | Descriptive Statistics 'OpenBudgets.eu' |
| DescriptiveWH | Descriptive Statistics |
| descriptr | Generate Descriptive Statistics |
| DescrTab2 | Publication Quality Descriptive Statistics Tables |
| descstat | Tools for Descriptive Statistics |
| descstatsr | Descriptive Univariate Statistics |
| desctable | Produce Descriptive and Comparative Tables Easily |
| DescTools | Tools for Descriptive Statistics |
| DescToolsAddIns | Interactive Functions to be Used as Shortcuts in 'RStudio' |
| deseats | Data-Driven Locally Weighted Regression for Trend and Seasonality in TS |
| Design.parameters | Parameters of the Experimental Designs |
| DesignCTPB | Design Clinical Trials with Potential Biomarker Effect |
| designer | 'Shiny' UI Prototype Builder |
| designit | Blocking and Randomization for Experimental Design |
| DesignLibrary | Library of Research Designs |
| designmatch | Matched Samples that are Balanced and Representative by Design |
| designr | Balanced Factorial Designs |
| designsize | Sample Size Calculation of Various Study Designs |
| desiR | Desirability Functions for Ranking, Selecting, and Integrating Data |
| desirability | Function Optimization and Ranking via Desirability Functions |
| desirability2 | Desirability Functions for Multiparameter Optimization |
| desk | Didactic Econometrics Starter Kit |
| desla | Desparsified Lasso Inference for Time Series |
| deSolve | Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE') |
| despair | Motivational Quotes and Shakespearean Bard–bits for Personal Projects |
| desplot | Plotting Field Plans for Agricultural Experiments |
| details | Create Details HTML Tag for Markdown and Package Documentation |
| detect | Analyzing Wildlife Data with Detection Error |
| detectnorm | Detect Nonnormality in Meta-Analysis without Raw Data |
| detector | Detect Data Containing Personally Identifiable Information |
| detectors | Prediction Data from GPT Detectors |
| detectR | Change Point Detection |
| detectRUNS | Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes |
| detectseparation | Detect and Check for Separation and Infinite Maximum Likelihood Estimates |
| DetLifeInsurance | Life Insurance Premium and Reserves Valuation |
| DetMCD | Implementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter) |
| detourr | Portable and Performant Tour Animations |
| detpack | Density Estimation and Random Number Generation with Distribution Element Trees |
| DetR | Suite of Deterministic and Robust Algorithms for Linear Regression |
| detrendeR | A Graphical User Interface (GUI) to Visualize and Analyze Dendrochronological Data |
| detrendr | Detrend Images |
| deTS | Tissue-Specific Enrichment Analysis |
| detzrcr | Compare Detrital Zircon Suites |
| devEMF | EMF Graphics Output Device |
| devFunc | Clear and Condense Argument Check for User-Defined Functions |
| devoid | A Graphic Device that Does Nothing |
| Devore7 | Data sets from Devore's "Prob and Stat for Eng (7th ed)" |
| devRate | Quantify the Relationship Between Development Rate and Temperature in Ectotherms |
| devtools | Tools to Make Developing R Packages Easier |
| DevTreatRules | Develop Treatment Rules with Observational Data |
| DEXiR | 'DEXi' Library |
| dexisensitivity | 'DEXi' Decision Tree Analysis and Visualization |
| dexter | Data Management and Analysis of Tests |
| dextergui | A Graphical User Interface for Dexter |
| dexterMST | CML and Bayesian Calibration of Multistage Tests |
| df2yaml | Convert Dataframe to 'YAML' |
| DFA | Detrended Fluctuation Analysis |
| DFA.CANCOR | Linear Discriminant Function and Canonical Correlation Analysis |
| dfadjust | Degrees of Freedom Adjustment for Robust Standard Errors |
| DFBA | Distribution-Free Bayesian Analysis |
| dfcomb | Phase I/II Adaptive Dose-Finding Design for Combination Studies |
| dfCompare | Compare Two Dataframes and Return Adds, Changes, and Deletes |
| dfcrm | Dose-Finding by the Continual Reassessment Method |
| DFD | Extract Drugs from Differential Expression Data from LINCS Database |
| dfdr | Automatic Differentiation of Simple Functions |
| dfexpand | Automatically Expand Delimited Column Values into Multiple Binary Columns with 'dfexpand' |
| dfidx | Indexed Data Frames |
| DFIT | Differential Functioning of Items and Tests |
| dfmeta | Meta-Analysis of Phase I Dose-Finding Early Clinical Trials |
| dfmirroR | Simulate a Data Frame Mirroring an Input and Produce Shareable Simulation Code |
| dfms | Dynamic Factor Models |
| dfmta | Phase I/II Adaptive Dose-Finding Design for MTA |
| dfoliatR | Detection and Analysis of Insect Defoliation Signals in Tree Rings |
| dfoptim | Derivative-Free Optimization |
| Dforest | Decision Forest |
| dformula | Data Manipulation using Formula |
| dfped | Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies |
| dfphase1 | Phase I Control Charts (with Emphasis on Distribution-Free Methods) |
| dfr | Dual Feature Reduction for SGL |
| dfrr | Dichotomized Functional Response Regression |
| dfsaneacc | Accelerated Derivative-Free Method for Large-Scale Nonlinear Systems of Equations |
| dfvad | Diewert and Fox's Method of Value Added Growth Decomposition |
| dga | Capture-Recapture Estimation using Bayesian Model Averaging |
| dGAselID | Genetic Algorithm with Incomplete Dominance for Feature Selection |
| DGEAR | Differential Gene Expression Analysis with R |
| DGEobj | Differential Gene Expression (DGE) Analysis Results Data Object |
| DGEobj.utils | Differential Gene Expression (DGE) Analysis Utility Toolkit |
| dggridR | Discrete Global Grids |
| dglars | Differential Geometric Least Angle Regression |
| dglm | Double Generalized Linear Models |
| DGLMExtPois | Double Generalized Linear Models Extending Poisson Regression |
| DGM | Dynamic Graphical Models |
| dgof | Discrete Goodness-of-Fit Tests |
| DGP4LCF | Dependent Gaussian Processes for Longitudinal Correlated Factors |
| dgpsi | Interface to 'dgpsi' for Deep and Linked Gaussian Process Emulations |
| dgumbel | The Gumbel Distribution Functions and Gradients |
| DHARMa | Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models |
| DHBins | Hexmaps for NZ District Health Boards |
| dhga | Differential Hub Gene Analysis |
| dhglm | Double Hierarchical Generalized Linear Models |
| dhh | A Heavy-Headed Distribution |
| DHS.rates | Calculates Demographic Indicators |
| dhsage | Reproductive Age Female Data of Various Demographic Health Surveys |
| dHSIC | Independence Testing via Hilbert Schmidt Independence Criterion |
| di | Deficit Index (DI) |
| diagis | Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling |
| diagL1 | Routines for Fit, Inference and Diagnostics in Linear L1 and LAD Models |
| diagmeta | Meta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints |
| diagonals | Block Diagonal Extraction or Replacement |
| diagram | Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams |
| DiagrammeR | Graph/Network Visualization |
| DiagrammeRsvg | Export DiagrammeR Graphviz Graphs as SVG |
| DiallelAnalysisR | Diallel Analysis with R |
| dialr | Parse, Format, and Validate International Phone Numbers |
| dialrjars | Required 'libphonenumber' jars for the 'dialr' Package |
| dials | Tools for Creating Tuning Parameter Values |
| diaplt | Beads Summary Plot of Ranges |
| diathor | Calculate Ecological Information and Diatom Based Indices |
| dibble | Dimensional Data Frames |
| dice | Calculate probabilities of various dice-rolling events |
| DiceDesign | Designs of Computer Experiments |
| DiceEval | Construction and Evaluation of Metamodels |
| DiceKriging | Kriging Methods for Computer Experiments |
| DICEM | Directness and Intensity of Conflict Expression |
| DiceOptim | Kriging-Based Optimization for Computer Experiments |
| diceplot | High Dimensional Categorical Data Visualization |
| diceR | Diverse Cluster Ensemble in R |
| DiceView | Methods for Visualization of Computer Experiments Design and Surrogate |
| dichromat | Color Schemes for Dichromats |
| DICOMread | Reading and Saving DICOM Image Files |
| DIconvex | Finding Patterns of Monotonicity and Convexity in Data |
| Dict | R6 Based Key-Value Dictionary Implementation |
| dictionar6 | R6 Dictionary Interface |
| dictionaRy | Retrieve the Dictionary Definitions of English Words |
| did | Treatment Effects with Multiple Periods and Groups |
| did2s | Two-Stage Difference-in-Differences Following Gardner (2021) |
| DidacticBoost | A Simple Implementation and Demonstration of Gradient Boosting |
| didec | Directed Dependence Coefficient |
| Diderot | Bibliographic Network Analysis |
| DiDforBigData | A Big Data Implementation of Difference-in-Differences Estimation with Staggered Treatment |
| DIDHAD | Difference-in-Differences in Heterogeneous Adoption Designs with Quasi Stayers |
| didimputation | Imputation Estimator from Borusyak, Jaravel, and Spiess (2021) |
| DIDmultiplegt | Estimators DID with Multiple Groups and Periods |
| DIDmultiplegtDYN | Estimation in Difference-in-Difference Designs with Multiple Groups and Periods |
| didrooRFM | Compute Recency Frequency Monetary Scores for your Customer Data |
| diemr | Diagnostic Index Expectation Maximisation in R |
| dietr | Diet Estimated Trophic Levels |
| diezeit | R Interface to the ZEIT ONLINE Content API |
| DIFboost | Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques |
| difconet | Differential Coexpressed Networks |
| diffcor | Fisher's z-Tests Concerning Differences Between Correlations |
| DiffCorr | Analyzing and Visualizing Differential Correlation Networks in Biological Data |
| diffdf | Dataframe Difference Tool |
| diffdfs | Compute the Difference Between Data Frames |
| diffee | Fast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure |
| diffEnrich | Given a List of Gene Symbols, Performs Differential Enrichment Analysis |
| diffeqr | Solving Differential Equations (ODEs, SDEs, DDEs, DAEs) |
| diffeR | Metrics of Difference for Comparing Pairs of Maps or Pairs of Variables |
| diffeRenTES | Computation of TES-Based Cell Differentiation Trees |
| diffIRT | Diffusion IRT Models for Response and Response Time Data |
| diffmatchpatch | String Diff, Match, and Patch Utilities |
| DiffNet | Identifying Significant Node Scores using Network Diffusion Algorithm |
| diffobj | Diffs for R Objects |
| diffpriv | Easy Differential Privacy |
| diffr | Display Differences Between Two Files using Codediff Library |
| diffudist | Diffusion Distance for Complex Networks |
| diffusion | Forecast the Diffusion of New Products |
| diffusionMap | Diffusion Map |
| diffval | Vegetation Patterns |
| diffviewer | HTML Widget to Show File Differences |
| DiffXTables | Pattern Analysis Across Contingency Tables |
| DIFlasso | A Penalty Approach to Differential Item Functioning in Rasch Models |
| DIFM | Dynamic ICAR Spatiotemporal Factor Models |
| difNLR | DIF and DDF Detection by Non-Linear Regression Models |
| DIFplus | Multilevel Mantel-Haenszel Statistics for Differential Item Functioning Detection |
| difR | Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF) |
| DIFshiny | Differential Item Functioning via Shiny Application |
| DIFtree | Item Focussed Trees for the Identification of Items in Differential Item Functioning |
| digest | Create Compact Hash Digests of R Objects |
| digiRhythm | Analyzing Animal's Rhythmicity |
| digitalPCR | Estimate Copy Number for Digital PCR |
| digitize | Use Data from Published Plots in R |
| digitTests | Tests for Detecting Irregular Digit Patterns |
| DIGSS | Determination of Intervals Using Georeferenced Survey Simulation |
| dilp | Reconstruct Paleoclimate and Paleoecology with Leaf Physiognomy |
| DIME | Differential Identification using Mixture Ensemble |
| dimensio | Multivariate Data Analysis |
| dimensionsR | Gathering Bibliographic Records from 'Digital Science Dimensions' Using 'DSL' API |
| DImodels | Diversity-Interactions (DI) Models |
| DImodelsMulti | Fit Multivariate Diversity-Interactions Models with Repeated Measures |
| DImodelsVis | Visualising and Interpreting Statistical Models Fit to Compositional Data |
| DIMORA | Diffusion Models R Analysis |
| dimRed | A Framework for Dimensionality Reduction |
| dina | Bayesian Estimation of DINA Model |
| dinamic | A Method to Analyze Recurrent DNA Copy Number Aberrations in Tumors |
| DiNAMIC.Duo | Finding Recurrent DNA Copy Number Alterations and Differences |
| dineq | Decomposition of (Income) Inequality |
| dineR | Differential Network Estimation in R |
| dint | A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates |
| DiPALM | Differential Pattern Analysis via Linear Modeling |
| DiPhiSeq | Robust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data |
| dipm | Depth Importance in Precision Medicine (DIPM) Method |
| DiPs | Directional Penalties for Optimal Matching in Observational Studies |
| dipsaus | A Dipping Sauce for Data Analysis and Visualizations |
| diptest | Hartigan's Dip Test Statistic for Unimodality - Corrected |
| dipw | Debiased Inverse Propensity Score Weighting |
| Dire | Linear Regressions with a Latent Outcome Variable |
| DIRECT | Bayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior |
| DirectedClustering | Directed Weighted Clustering Coefficient |
| DirectEffects | Estimating Controlled Direct Effects for Explaining Causal Findings |
| Directional | A Collection of Functions for Directional Data Analysis |
| directlabels | Direct Labels for Multicolor Plots |
| directotree | Creates an Interactive Tree Structure of a Directory |
| directPA | Direction Analysis for Pathways and Kinases |
| DirectStandardisation | Adjusted Means and Proportions by Direct Standardisation |
| dirichletprocess | Build Dirichlet Process Objects for Bayesian Modelling |
| DirichletReg | Dirichlet Regression |
| dirmcmc | Directional Metropolis Hastings Algorithm |
| dirmult | Estimation in Dirichlet-Multinomial Distribution |
| DirStats | Nonparametric Methods for Directional Data |
| dirttee | Distributional Regression for Time to Event Data |
| disaggR | Two-Steps Benchmarks for Time Series Disaggregation |
| DisaggregateTS | High-Dimensional Temporal Disaggregation |
| disaggregation | Disaggregation Modelling |
| disastr.api | Wrapper for the UN OCHA ReliefWeb Disaster Events API |
| disbayes | Bayesian Multi-State Modelling of Chronic Disease Burden Data |
| discAUC | Linear and Non-Linear AUC for Discounting Data |
| DIscBIO | A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics |
| discFA | Discrete Factor Analysis |
| discfrail | Cox Models for Time-to-Event Data with Nonparametric Discrete Group-Specific Frailties |
| discharge | Fourier Analysis of Discharge Data |
| disclap | Discrete Laplace Exponential Family |
| disclapmix | Discrete Laplace Mixture Inference using the EM Algorithm |
| disclapmix2 | Mixtures of Discrete Laplace Distributions using Numerical Optimisation |
| disclosuR | Text Conversion from Nexis Uni PDFs to R Data Frames |
| discnorm | Test for Discretized Normality in Ordinal Data |
| discord | Functions for Discordant Kinship Modeling |
| DiSCos | Distributional Synthetic Controls Estimation |
| discourseGT | Analyze Group Patterns using Graph Theory in Educational Settings |
| discoveR | Exploratory Data Analysis System |
| discoverableresearch | Checks Title, Abstract and Keywords to Optimise Discoverability |
| DiscreteDatasets | Example Data Sets for Use with Discrete Statistical Tests |
| DiscreteDists | Discrete Statistical Distributions |
| DiscreteFDR | FDR Based Multiple Testing Procedures with Adaptation for Discrete Tests |
| discretefit | Simulated Goodness-of-Fit Tests for Discrete Distributions |
| DiscreteGapStatistic | An Extension of the Gap Statistic for Ordinal/Categorical Data |
| DiscreteInverseWeibull | Discrete Inverse Weibull Distribution |
| DiscreteLaplace | Discrete Laplace Distributions |
| DiscreteQvalue | Improved q-Values for Discrete Uniform and Homogeneous Tests |
| DiscreteTests | Vectorised Computation of P-Values and Their Supports for Several Discrete Statistical Tests |
| DiscreteWeibull | Discrete Weibull Distributions (Type 1 and 3) |
| discretization | Data Preprocessing, Discretization for Classification |
| discrim | Model Wrappers for Discriminant Analysis |
| discrtr | A Companion Package for the Book "Discrete Choice Analysis with 'R'" |
| discSurv | Discrete Time Survival Analysis |
| discursive | Measuring Discursive Sophistication in Open-Ended Survey Responses |
| disdat | Data for Comparing Species Distribution Modeling Methods |
| diseasemapping | Modelling Spatial Variation in Disease Risk for Areal Data |
| diseasystore | Feature Stores for the 'diseasy' Framework |
| DisHet | Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples |
| DisimForMixed | Calculate Dissimilarity Matrix for Dataset with Mixed Attributes |
| DisImpact | Calculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups |
| disk.frame | Larger-than-RAM Disk-Based Data Manipulation Framework |
| dismo | Species Distribution Modeling |
| disordR | Non-Ordered Vectors |
| disparityfilter | Disparity Filter Algorithm for Weighted Networks |
| dispeRse | Simulation of Demic Diffusion with Environmental Constraints |
| dispmod | Modelling Dispersion in GLM |
| disposables | Create Disposable R Packages for Testing |
| dispositionEffect | Analysis of Disposition Effect on Financial Portfolios |
| dispRity | Measuring Disparity |
| disprofas | Non-Parametric Dissolution Profile Analysis |
| disprose | Discriminating Probes Selection |
| dissCqN | Multiple Assemblage Dissimilarity for Orders q = 0-N |
| dissever | Spatial Downscaling using the Dissever Algorithm |
| DiSSMod | Fitting Sample Selection Models for Discrete Response Variables |
| Distance | Distance Sampling Detection Function and Abundance Estimation |
| distances | Tools for Distance Metrics |
| distanceto | Calculate Distance to Features |
| distantia | Assessing Dissimilarity Between Multivariate Time Series |
| DistatisR | DiSTATIS Three Way Metric Multidimensional Scaling |
| distcomp | Computations over Distributed Data without Aggregation |
| distcrete | Discrete Distribution Approximations |
| distdichoR | Distributional Method for the Dichotomisation of Continuous Outcomes |
| distfree.cr | Distribution-Free Confidence Region |
| distfreereg | Distribution-Free Goodness-of-Fit Testing for Regression |
| distfromq | Reconstruct a Distribution from a Collection of Quantiles |
| distill | 'R Markdown' Format for Scientific and Technical Writing |
| distillery | Method Functions for Confidence Intervals and to Distill Information from an Object |
| distillML | Model Distillation and Interpretability Methods for Machine Learning Models |
| distinctiveness | Distinctiveness Centrality |
| disto | Unified Interface to Distance, Dissimilarity, Similarity Matrices |
| distops | Usual Operations for Distance Matrices in R |
| distory | Distance Between Phylogenetic Histories |
| DistPlotter | A Graphical User Interface for Plotting Common Univariate Distributions |
| distr | Object Oriented Implementation of Distributions |
| distrDoc | Documentation for 'distr' Family of R Packages |
| distreg.vis | Framework for the Visualization of Distributional Regression Models |
| distrEllipse | S4 Classes for Elliptically Contoured Distributions |
| distrEx | Extensions of Package 'distr' |
| DISTRIB | Four Essential Functions for Statistical Distributions Analysis: A New Functional Approach |
| Distributacalcul | Probability Distribution Functions |
| distributional | Vectorised Probability Distributions |
| DistributionOptimization | Distribution Optimization |
| distributions3 | Probability Distributions as S3 Objects |
| distributionsrd | Distribution Fitting and Evaluation |
| DistributionTest | Powerful Goodness-of-Fit Tests Based on the Likelihood Ratio |
| DistributionUtils | Distribution Utilities |
| distrMod | Object Oriented Implementation of Probability Models |
| distro | Linux Distribution Properties |
| distrom | Distributed Multinomial Regression |
| distrr | Estimate and Manage Empirical Distributions |
| distrRmetrics | Distribution Classes for Distributions from Rmetrics |
| distrSim | Simulation Classes Based on Package 'distr' |
| distrTeach | Extensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School |
| distrTEst | Estimation and Testing Classes Based on Package 'distr' |
| distTails | A Collection of Full Defined Distribution Tails |
| disttools | Distance Object Manipulation Tools |
| dittodb | A Test Environment for Database Requests |
| dittoViz | User Friendly Data Visualization |
| div | Report on Diversity and Inclusion in a Corporate Setting |
| divDyn | Diversity Dynamics using Fossil Sampling Data |
| DivE | Diversity Estimator |
| diveMove | Dive Analysis and Calibration |
| divent | Entropy Partitioning to Measure Diversity |
| diveR | Easily Install and Load Interactive Data Visualization Tools |
| diverge | Evolutionary Trait Divergence Between Sister Species and Other Paired Lineages |
| diverse | Diversity Measures for Complex Systems |
| DiversificationR | Econometric Tools to Measure Portfolio Diversification |
| diversitree | Comparative 'Phylogenetic' Analyses of Diversification |
| diversityForest | Innovative Complex Split Procedures in Random Forests Through Candidate Split Sampling |
| divest | Get Images Out of DICOM Format Quickly |
| divo | Tools for Analysis of Diversity and Similarity in Biological Systems |
| divraster | Diversity Metrics Calculations for Rasterized Data |
| divseg | Calculate Diversity and Segregation Indices |
| divvy | Spatial Subsampling of Biodiversity Occurrence Data |
| dixon | Nearest Neighbour Contingency Table Analysis |
| dixonTest | Dixon's Ratio Test for Outlier Detection |
| diyar | Record Linkage and Epidemiological Case Definitions in 'R' |
| DIZtools | Lightweight Utilities for 'DIZ' R Package Development |
| DIZutils | Utilities for 'DIZ' R Package Development |
| DJL | Distance Measure Based Judgment and Learning |
| dkanr | Client for the 'DKAN' API |
| dLagM | Time Series Regression Models with Distributed Lag Models |
| DLASSO | Implementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models |
| dlbayes | Use Dirichlet Laplace Prior to Solve Linear Regression Problem and Do Variable Selection |
| DLEGFM | Distributed Loading Estimation for General Factor Model |
| dlib | Allow Access to the 'Dlib' C++ Library |
| dlim | Distributed Lag Interaction Model |
| DLL | Decorrelated Local Linear Estimator |
| dlm | Bayesian and Likelihood Analysis of Dynamic Linear Models |
| DLMtool | Data-Limited Methods Toolkit |
| dlmtree | Bayesian Treed Distributed Lag Models |
| dlnm | Distributed Lag Non-Linear Models |
| dlookr | Tools for Data Diagnosis, Exploration, Transformation |
| DLPCA | The Distributed Local PCA Algorithm |
| dlr | Download and Cache Files Safely |
| dlsem | Distributed-Lag Linear Structural Equation Models |
| dlstats | Download Stats of R Packages |
| dm | Relational Data Models |
| dma | Dynamic Model Averaging |
| dmai | Divisia Monetary Aggregates Index |
| dmbc | Model Based Clustering of Binary Dissimilarity Measurements |
| DMCfun | Diffusion Model of Conflict (DMC) in Reaction Time Tasks |
| dmetatools | Computational Tools for Meta-Analysis of Diagnostic Accuracy Test |
| dml | Distance Metric Learning in R |
| dmlalg | Double Machine Learning Algorithms |
| dmm | Dyadic Mixed Model for Pedigree Data |
| DMMF | Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model |
| dMod | Dynamic Modeling and Parameter Estimation in ODE Models |
| DMQ | Dynamic Multiple Quantile (DMQ) Model |
| dmri.tracking | DiST - Diffusion Direction Smoothing and Tracking |
| DMRnet | Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data |
| DMtest | Differential Methylation Tests (DMtest) |
| DMTL | Tools for Applying Distribution Mapping Based Transfer Learning |
| dmtools | Tools for Clinical Data Management |
| dmutate | Mutate Data Frames with Random Variates |
| DMwR2 | Functions and Data for the Second Edition of "Data Mining with R" |
| DNAmixturesLite | Statistical Inference for Mixed Traces of DNA (Lite-Version) |
| DNAmotif | DNA Sequence Motifs |
| DNAseqtest | Generating and Testing DNA Sequences |
| DNAtools | Tools for Analysing Forensic Genetic DNA Data |
| dndR | Dungeons & Dragons Functions for Players and Dungeon Masters |
| DNetFinder | Estimating Differential Networks under Semiparametric Gaussian Graphical Models |
| dng | Distributions and Gradients |
| DNH4 | Crawling for Daum News Text |
| DNLC | Differential Network Local Consistency Analysis |
| DNMF | Discriminant Non-Negative Matrix Factorization |
| dnn | Deep Neural Network Tools for Probability and Statistic Models |
| dnr | Simulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family |
| do | Data Operator |
| do3PCA | Probabilistic Phylogenetic Principal Component Analysis |
| dobin | Dimension Reduction for Outlier Detection |
| dobson | Data from the GLM Book by Dobson and Barnett |
| doBy | Groupwise Statistics, LSmeans, Linear Estimates, Utilities |
| doc2concrete | Measuring Concreteness in Natural Language |
| doc2vec | Distributed Representations of Sentences, Documents and Topics |
| dockerfiler | Easy Dockerfile Creation from R |
| DockerParallel | Using the Docker Container to Create R Workers on Local or Cloud Platform |
| docket | Insert R Data into 'Word' Documents |
| docknitr | Use Docker Images to Process Rmarkdown Blocks |
| doconv | Document Conversion to 'PDF' or 'PNG' |
| docopt | Command-Line Interface Specification Language |
| docopulae | Optimal Designs for Copula Models |
| docore | Utility Functions for Scientific Coding |
| docstring | Provides Docstring Capabilities to R Functions |
| doctest | Generate Tests from Examples Using 'roxygen' and 'testthat' |
| document | Run 'roxygen2' on (Chunks of) Single Code Files |
| documenter | Documents Files |
| docuSignr | Connect to 'DocuSign' API |
| docxtractr | Extract Data Tables and Comments from 'Microsoft' 'Word' Documents |
| Dodge | Acceptance Sampling Ideas Originated by H.F. Dodge |
| dodgr | Distances on Directed Graphs |
| DoE.base | Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages |
| DoE.MIParray | Creation of Arrays by Mixed Integer Programming |
| DoE.wrapper | Wrapper Package for Design of Experiments Functionality |
| doebioresearch | Analysis of Design of Experiments for Biological Research |
| DOEM | The Distributed Online Expectation Maximization Algorithms to Solve Parameters of Poisson Mixture Models |
| DoEstRare | Rare Variant Association Test Based on Position Density Estimation |
| doex | The One-Way Heteroscedastic ANOVA Tests |
| doFuture | Use Foreach to Parallelize via the Future Framework |
| dogesr | Work with the Doges/Dogaresse Dataset |
| doMC | Foreach Parallel Adaptor for 'parallel' |
| dominanceanalysis | Dominance Analysis |
| domino | R Console Bindings for the 'Domino Command-Line Client' |
| DominoDataR | 'Domino Data R SDK' |
| domir | Tools to Support Relative Importance Analysis |
| doMPI | Foreach Parallel Adaptor for the Rmpi Package |
| donut | Nearest Neighbour Search with Variables on a Torus |
| donutsk | Construct Advanced Donut Charts |
| doofa | Designs for Order-of-Addition Experiments |
| doolkit | Exploration of Dental Surface Topography |
| doParallel | Foreach Parallel Adaptor for the 'parallel' Package |
| DOPE | Drug Ontology Parsing Engine |
| doRedis | 'Foreach' Parallel Adapter Using the 'Redis' Database |
| doremi | Dynamics of Return to Equilibrium During Multiple Inputs |
| doRNG | Generic Reproducible Parallel Backend for 'foreach' Loops |
| DOS | Design of Observational Studies |
| DOS2 | Design of Observational Studies, Companion to the Second Edition |
| dosearch | Causal Effect Identification from Multiple Incomplete Data Sources |
| dosedesignR | Interactive Designing of Dose Finding Studies |
| DoseFinding | Planning and Analyzing Dose Finding Experiments |
| doseminer | Extract Drug Dosages from Free-Text Prescriptions |
| doseSens | Conduct Sensitivity Analysis with Continuous Exposures and Binary Outcomes |
| doSNOW | Foreach Parallel Adaptor for the 'snow' Package |
| DOSPortfolio | Dynamic Optimal Shrinkage Portfolio |
| dosresmeta | Multivariate Dose-Response Meta-Analysis |
| dostats | Compute Statistics Helper Functions |
| DOT | Render and Export DOT Graphs in R |
| dotCall64 | Enhanced Foreign Function Interface Supporting Long Vectors |
| dotenv | Load Environment Variables from '.env' |
| dotgen | Gene-Set Analysis via Decorrelation by Orthogonal Transformation |
| dotprofile | Create and Manage Configuration Profiles |
| dots | Dot Density Maps |
| dotsViolin | Dot Plots Mimicking Violin Plots |
| dotty | The Unpacking Dot Operator |
| dotwhisker | Dot-and-Whisker Plots of Regression Results |
| doubcens | Survivor Function Estimation for Doubly Interval-Censored Failure Time Data |
| double.truncation | Analysis of Doubly-Truncated Data |
| DoubleCone | Test Against Parametric Regression Function |
| DoubleExpSeq | Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter |
| DoubleML | Double Machine Learning in R |
| doublIn | Estimate Incubation or Latency Time using Doubly Interval Censored Observations |
| doubt | Enable Operators Containing the '?' Symbol |
| douconca | Double Constrained Correspondence Analysis for Trait-Environment Analysis in Ecology |
| doudpackage | Create Elegant Table 1 in HTML for Bio-Statistics |
| DOvalidation | Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation |
| DOVE | Durability of Vaccine Efficacy |
| Dowd | Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk |
| downlit | Syntax Highlighting and Automatic Linking |
| downloader | Download Files over HTTP and HTTPS |
| downloadthis | Implement Download Buttons in 'rmarkdown' |
| downscale | Downscaling Species Occupancy |
| downsize | A Tool to Downsize Large Analysis Projects for Testing |
| dowser | B Cell Receptor Phylogenetics Toolkit |
| DOYPAColors | Don't Overthink Your Palette of Colors |
| dparser | Port of 'Dparser' Package |
| dpasurv | Dynamic Path Analysis of Survival Data via Aalen's Additive Hazards Model |
| DPBBM | Dirichlet Process Beta-Binomial Mixture |
| dpcc | Dynamic Programming for Convex Clustering |
| dPCP | Automated Analysis of Multiplex Digital PCR Data |
| Dpit | Distribution Pitting |
| dpkg | Create, Stow, and Read Data Packages |
| dplR | Dendrochronology Program Library in R |
| dplyr | A Grammar of Data Manipulation |
| dplyrAssist | RStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr' |
| dpm | Dynamic Panel Models Fit with Maximum Likelihood |
| dpmr | Data Package Manager for R |
| DPP | Inference of Parameters of Normal Distributions from a Mixture of Normals |
| DPpack | Differentially Private Statistical Analysis and Machine Learning |
| dppmix | Determinantal Point Process Mixture Models |
| DPQ | Density, Probability, Quantile ('DPQ') Computations |
| DPQmpfr | DPQ (Density, Probability, Quantile) Distribution Computations using MPFR |
| dprop | Computation of Some Important Distributional Properties |
| dpseg | Piecewise Linear Segmentation by Dynamic Programming |
| DPTM | Dynamic Panel Multiple Threshold Model with Fixed Effects |
| DPtree | Dirichlet-Based Polya Tree |
| DQAgui | Graphical User Interface for Data Quality Assessment |
| DQAstats | Core Functions for Data Quality Assessment |
| dqrng | Fast Pseudo Random Number Generators |
| dQTG.seq | A BSA Software for Detecting All Types of QTLs in BC, DH, RIL and F2 |
| dr | Methods for Dimension Reduction for Regression |
| DR.SC | Joint Dimension Reduction and Spatial Clustering |
| dr4pl | Dose Response Data Analysis using the 4 Parameter Logistic (4pl) Model |
| dracor | Decode Draco Format 3D Mesh Data |
| dragonking | Statistical Tools to Identify Dragon Kings |
| dragracer | Data Sets for RuPaul's Drag Race |
| dragulaR | Drag and Drop Elements in 'Shiny' using 'Dragula Javascript Library' |
| drake | A Pipeline Toolkit for Reproducible Computation at Scale |
| DramaAnalysis | Analysis of Dramatic Texts |
| drape | Doubly Robust Average Partial Effects |
| drat | 'Drat' R Archive Template |
| draw | Wrapper Functions for Producing Graphics |
| drawer | An Interactive HTML Image Editing Tool |
| DRaWR | Discriminative Random Walk with Restart |
| drawsample | Draw Samples with the Desired Properties from a Data Set |
| DRAYL | Computation of Rayleigh Densities of Arbitrary Dimension |
| DrBats | Data Representation: Bayesian Approach That's Sparse |
| drc | Analysis of Dose-Response Curves |
| drcarlate | Improving Estimation Efficiency in CAR with Imperfect Compliance |
| drclust | Simultaneous Clustering and (or) Dimensionality Reduction |
| drcSeedGerm | Utilities for Data Analyses in Seed Germination/Emergence Assays |
| drcte | Statistical Approaches for Time-to-Event Data in Agriculture |
| drda | Dose-Response Data Analysis |
| DRDID | Doubly Robust Difference-in-Differences Estimators |
| DrDimont | Drug Response Prediction from Differential Multi-Omics Networks |
| DRDRtest | A Nonparametric Doubly Robust Test for Continuous Treatment Effect |
| dreamer | Dose Response Models for Bayesian Model Averaging |
| dreamerr | Error Handling Made Easy |
| DREGAR | Regularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR) |
| drf | Distributional Random Forests |
| drgee | Doubly Robust Generalized Estimating Equations |
| drglm | Fitting Linear and Generalized Linear Models in "Divide and Recombine" Approach to Large Data Sets |
| DRHotNet | Differential Risk Hotspots in a Linear Network |
| drhur | Learning R with Dr. Hu |
| DriftBurstHypothesis | Calculates the Test-Statistic for the Drift Burst Hypothesis |
| drifter | Concept Drift and Concept Shift Detection for Predictive Models |
| DrillR | R Driver for Apache Drill |
| drimmR | Estimation, Simulation and Reliability of Drifting Markov Models |
| DrImpute | Imputing Dropout Events in Single-Cell RNA-Sequencing Data |
| DRIP | Discontinuous Regression and Image Processing |
| driveR | Prioritizing Cancer Driver Genes Using Genomics Data |
| droll | Analyze Roll Distributions |
| DRomics | Dose Response for Omics |
| dropout | Handling Incomplete Responses in Survey Data Analysis |
| dropR | Dropout Analysis by Condition |
| droptest | Simulates LOX Drop Testing |
| drord | Doubly-Robust Estimators for Ordinal Outcomes |
| drought | Statistical Modeling and Assessment of Drought |
| drpop | Efficient and Doubly Robust Population Size Estimation |
| DRquality | Quality Measurements for Dimensionality Reduction |
| DRR | Dimensionality Reduction via Regression |
| drtmle | Doubly-Robust Nonparametric Estimation and Inference |
| drugDemand | Drug Demand Forecasting |
| drugdevelopR | Utility-Based Optimal Phase II/III Drug Development Planning |
| DrugExposureDiagnostics | Diagnostics for OMOP Common Data Model Drug Records |
| drugprepr | Prepare Electronic Prescription Record Data to Estimate Drug Exposure |
| DrugSim2DR | Predict Drug Functional Similarity to Drug Repurposing |
| DrugUtilisation | Summarise Patient-Level Drug Utilisation in Data Mapped to the OMOP Common Data Model |
| drumr | Turn R into a Drum Machine |
| DRviaSPCN | Drug Repurposing in Cancer via a Subpathway Crosstalk Network |
| ds | Descriptive Statistics |
| ds4psy | Data Science for Psychologists |
| dsa | Seasonal Adjustment of Daily Time Series |
| DSAIDE | Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution) |
| DSAIRM | Dynamical Systems Approach to Immune Response Modeling |
| DSAM | Data Splitting Algorithms for Model Developments |
| dsample | Discretization-Based Direct Random Sample Generation |
| dsb | Normalize & Denoise Droplet Single Cell Protein Data (CITE-Seq) |
| DSBayes | Bayesian Subgroup Analysis in Clinical Trials |
| dscore | D-Score for Child Development |
| dsdp | Density Estimation with Semidefinite Programming |
| dsem | Fit Dynamic Structural Equation Models |
| DSI | 'DataSHIELD' Interface |
| dsims | Distance Sampling Simulations |
| DSjobtracker | What Skills and Qualifications are Required for Data Science Related Jobs? |
| DSL | Distributed Storage and List |
| dslabs | Data Science Labs |
| dsld | Data Science Looks at Discrimination |
| dslice | Dynamic Slicing |
| DSLite | 'DataSHIELD' Implementation on Local Datasets |
| dsm | Density Surface Modelling of Distance Sampling Data |
| dsmisc | Data Science Box of Pandora Miscellaneous |
| dsmmR | Estimation and Simulation of Drifting Semi-Markov Models |
| DSMolgenisArmadillo | 'DataSHIELD' Client for 'MOLGENIS Armadillo' |
| dsmSearch | DSM and LiDAR downloader |
| DSOpal | 'DataSHIELD' Implementation for 'Opal' |
| dsos | Dataset Shift with Outlier Scores |
| DSpoty | Get 'Spotify' API Multiple Information |
| dsrTest | Tests and Confidence Intervals on Directly Standardized Rates for Several Methods |
| DSSAT | A Comprehensive R Interface for the DSSAT Cropping Systems Model |
| dssd | Distance Sampling Survey Design |
| DSSP | Implementation of the Direct Sampling Spatial Prior |
| dst | Using the Theory of Belief Functions |
| dstabledist | The Discrete Stable Distribution Functions |
| DstarM | Analyze Two Choice Reaction Time Data with the D*M Method |
| dstat | Conditional Sensitivity Analysis for Matched Observational Studies |
| dstat2x2xk | Demonstrated Insensitivity to Bias in 2x2xK Contingency Tables |
| dSTEM | Multiple Testing of Local Extrema for Detection of Change Points |
| dsTidyverse | 'DataSHIELD' 'Tidyverse' Serverside Package |
| dsTidyverseClient | 'DataSHIELD' 'Tidyverse' Clientside Package |
| dSVA | Direct Surrogate Variable Analysis |
| DSWE | Data Science for Wind Energy |
| DT | A Wrapper of the JavaScript Library 'DataTables' |
| Dtableone | Tabular Comparison of Paired Diagnostic Tests |
| dtangle | Cell Type Deconvolution from Gene Expressions |
| DTAplots | Creates Plots Accompanying Bayesian Diagnostic Test Accuracy Meta-Analyses |
| DTAT | Dose Titration Algorithm Tuning |
| DTAXG | Diagnostic Test Assessment in the Absence of Gold Standard |
| dTBM | Multi-Way Spherical Clustering via Degree-Corrected Tensor Block Models |
| dtComb | Statistical Combination of Diagnostic Tests |
| DTComPair | Comparison of Binary Diagnostic Tests in a Paired Study Design |
| DtD | Distance to Default |
| DTDA | Doubly Truncated Data Analysis |
| DTDA.cif | Doubly Truncated Data Analysis, Cumulative Incidence Functions |
| DTDA.ni | Doubly Truncated Data Analysis, Non Iterative |
| dtgiw | Discrete Transmuted Generalized Inverse Weibull Distribution |
| dti | Analysis of Diffusion Weighted Imaging (DWI) Data |
| dtmapi | Fetching Data from the 'Displacement Tracking Matrix' |
| DTMCPack | Suite of Functions Related to Discrete-Time Discrete-State Markov Chains |
| dtp | Dynamic Panel Threshold Model |
| dtpcrm | Dose Transition Pathways for Continual Reassessment Method |
| dtplyr | Data Table Back-End for 'dplyr' |
| dtrackr | Track your Data Pipelines |
| dtreg | Interact with Data Type Registries and Create Machine-Readable Data |
| DTRKernSmooth | Estimate and Make Inference About Optimal Treatment Regimes via Smoothed Methods |
| DTRlearn2 | Statistical Learning Methods for Optimizing Dynamic Treatment Regimes |
| DTRreg | DTR Estimation and Inference via G-Estimation, Dynamic WOLS, Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv) |
| dtrSurv | Dynamic Treatment Regimes for Survival Analysis |
| DTSEA | Drug Target Set Enrichment Analysis |
| DTSg | A Class for Working with Time Series Data Based on 'data.table' and 'R6' with Largely Optional Reference Semantics |
| DTSR | Distributed Trimmed Scores Regression for Handling Missing Data |
| dtt | Discrete Trigonometric Transforms |
| dttr2 | Manipulate Date, POSIXct and hms Vectors |
| dtts | 'data.table' Time-Series |
| dtw | Dynamic Time Warping Algorithms |
| DTWBI | Imputation of Time Series Based on Dynamic Time Warping |
| dtwclust | Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance |
| DTwrappers | Simplified Data Analysis with Wrapper Functions for the 'Data.Table' Package |
| DTwrappers2 | Extensions of 'DTwrappers' |
| DTWUMI | Imputation of Multivariate Time Series Based on Dynamic Time Warping |
| dual | Automatic Differentiation with Dual Numbers |
| dualScale | Dual Scaling Analysis of Data |
| dualtrees | Decimated and Undecimated 2D Complex Dual-Tree Wavelet Transform |
| duawranglr | Securely Wrangle Dataset According to Data Usage Agreement |
| dub | Unpacking Assignment for Lists via Pattern Matching |
| duckdb | DBI Package for the DuckDB Database Management System |
| duckdbfs | High Performance Remote File System, Database and 'Geospatial' Access Using 'duckdb' |
| duckduckr | Simple Client for the DuckDuckGo Instant Answer API |
| duckplyr | A 'DuckDB'-Backed Version of 'dplyr' |
| duke | Creating a Color-Blind Friendly Duke Color Package |
| dumbbell | Displaying Changes Between Two Points Using Dumbbell Plots |
| dummy | Automatic Creation of Dummies with Support for Predictive Modeling |
| dundermifflin | The Office Quotes on-Demand |
| dunlin | Preprocessing Tools for Clinical Trial Data |
| dunn.test | Dunn's Test of Multiple Comparisons Using Rank Sums |
| dupiR | Bayesian Inference from Count Data using Discrete Uniform Priors |
| dupNodes | Computes DNSLbetweenness, a Betweenness Measure that Includes Self-Loops |
| dupree | Identify Duplicated R Code in a Project |
| Durga | Effect Size Estimation and Visualisation |
| dverse | Document a Universe of Packages |
| DVHmetrics | Analyze Dose-Volume Histograms and Check Constraints |
| dvir | Disaster Victim Identification |
| dvmisc | Convenience Functions, Moving Window Statistics, and Graphics |
| dvqcc | Dynamic VAR - Based Control Charts for Batch Process Monitoring |
| dwctaxon | Edit and Validate Darwin Core Taxon Data |
| DWDLargeR | Fast Algorithms for Large Scale Generalized Distance Weighted Discrimination |
| dwdradar | Read Binary Radar Files from 'DWD' (German Weather Service) |
| DWLasso | Degree Weighted Lasso |
| dwlm | Doubly Weighted Linear Model |
| DWLS | Gene Expression Deconvolution Using Dampened Weighted Least Squares |
| dwp | Density-Weighted Proportion |
| DWreg | Parametric Regression for Discrete Response |
| dyads | Dyadic Network Analysis |
| dycdtools | Calibration Assistant and Post-Processing Tool for Aquatic Ecosystem Model DYRESM-CAEDYM |
| dydea | Detection of Chaotic and Regular Intervals in the Data |
| dygraphs | Interface to 'Dygraphs' Interactive Time Series Charting Library |
| Dykstra | Quadratic Programming using Cyclic Projections |
| DYM | Did You Mean? |
| DyMEP | Dynamic Multi Environment Phenology-Model |
| dymo | Dynamic Mode Decomposition for Multivariate Time Feature Prediction |
| dyn | Time Series Regression |
| dyn.log | Dynamic Logging for R Inspired by Configuration Driven Development |
| dynamac | Dynamic Simulation and Testing for Single-Equation ARDL Models |
| dynamAedes | A Unified Mechanistic Model for the Population Dynamics of Invasive Aedes Mosquitoes |
| dynamic | DFI Cutoffs for Latent Variable Models |
| dynamicSDM | Species Distribution and Abundance Modelling at High Spatio-Temporal Resolution |
| dynamicTreeCut | Methods for Detection of Clusters in Hierarchical Clustering Dendrograms |
| dynamite | Bayesian Modeling and Causal Inference for Multivariate Longitudinal Data |
| DynaRankR | Inferring Longitudinal Dominance Hierarchies |
| DynareR | Bringing the Power of 'Dynare' to 'R', 'R Markdown', and 'Quarto' |
| dynaSpec | Dynamic Spectrogram Visualizations |
| DYNATE | Dynamic Aggregation Testing |
| dynatop | An Implementation of Dynamic TOPMODEL Hydrological Model in R |
| dynatopGIS | Algorithms for Helping Build Dynamic TOPMODEL Implementations from Spatial Data |
| dynaTree | Dynamic Trees for Learning and Design |
| dynBiplotGUI | Full Interactive GUI for Dynamic Biplot in R |
| DynClust | Denoising and Clustering for Dynamical Image Sequence (2D or 3D)+t |
| dyncomp | Complexity of Short and Coarse-Grained Time Series |
| dynConfiR | Dynamic Models for Confidence and Response Time Distributions |
| dynCorr | Dynamic Correlation Package |
| dyndimred | Dimensionality Reduction Methods in a Common Format |
| dynetNLAResistance | Resisting Neighbor Label Attack in a Dynamic Network |
| DynForest | Random Forest with Multivariate Longitudinal Predictors |
| dyngen | A Multi-Modal Simulator for Spearheading Single-Cell Omics Analyses |
| dynlm | Dynamic Linear Regression |
| dynmix | Estimation of Dynamic Finite Mixtures |
| DynNom | Visualising Statistical Models using Dynamic Nomograms |
| dynpanel | Dynamic Panel Data Models |
| dynparam | Creating Meta-Information for Parameters |
| dynpred | Companion Package to "Dynamic Prediction in Clinical Survival Analysis" |
| dynprog | Dynamic Programming Domain-Specific Language |
| dynr | Dynamic Models with Regime-Switching |
| dynRB | Dynamic Range Boxes |
| dynsim | Dynamic Simulations of Autoregressive Relationships |
| dynsurv | Dynamic Models for Survival Data |
| dyntaper | Dynamic Stem Profile Models, AKA Tree Taper Equations |
| DynTxRegime | Methods for Estimating Optimal Dynamic Treatment Regimes |
| dynutils | Common Functionality for the 'dynverse' Packages |
| dynwrap | Representing and Inferring Single-Cell Trajectories |
| dySEM | Dyadic Structural Equation Modeling |
| DysPIA | Dysregulated Pathway Identification Analysis |
| DysPIAData | Background and Pathway Data Used in 'DysPIA' |
| DySS | Dynamic Screening Systems |
| e1071 | Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien |
| E4tools | Management and Processing Tools for Data Produced by the Empatica E4 |
| eadrm | Fitting Dose-Response Models Using an Evolutionary Algorithm |
| eaf | Plots of the Empirical Attainment Function |
| Eagle | Multiple Locus Association Mapping on a Genome-Wide Scale |
| EAinference | Estimator Augmentation and Simulation-Based Inference |
| eAnalytics | Dynamic Web-Based Analytics for the Energy Industry |
| earlygating | Properties of Bayesian Early Gating Designs |
| earlyR | Estimation of Transmissibility in the Early Stages of a Disease Outbreak |
| earlywarnings | Early Warning Signals for Critical Transitions in Time Series |
| earth | Multivariate Adaptive Regression Splines |
| earthdatalogin | NASA 'EarthData' Login Utilities |
| earthtide | Parallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides |
| earthtones | Derive a Color Palette from a Particular Location on Earth |
| Ease | Simulating Explicit Population Genetics Models |
| easy.glmnet | Functions to Simplify the Use of 'glmnet' for Machine Learning |
| easy.utils | Frequently Used Functions for Easy R Programming |
| EasyABC | Efficient Approximate Bayesian Computation Sampling Schemes |
| easyAHP | Analytic Hierarchy Process (AHP) |
| easyalluvial | Generate Alluvial Plots with a Single Line of Code |
| easyanova | Analysis of Variance and Other Important Complementary Analyses |
| easybgm | Extracting and Visualizing Bayesian Graphical Models |
| easybio | Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit |
| easycensus | Quickly Find, Extract, and Marginalize U.S. Census Tables |
| easyclimate | Easy Access to High-Resolution Daily Climate Data for Europe |
| easyCODA | Compositional Data Analysis in Practice |
| easycsv | Load Multiple 'csv' and 'txt' Tables |
| easydb | Easily Connect to Common Types of Databases |
| easyDes | An Easy Way to Descriptive Analysis |
| EasyDescribe | A Convenient Way of Descriptive Statistics |
| easyDifferentialGeneCoexpression | Easily Performs Differential Coexpression Analysis |
| easylabel | Interactive Scatter Plot and Volcano Plot Labels |
| EasyMx | Easy Model-Builder Functions for 'OpenMx' |
| easyNCDF | Tools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays |
| easynls | Easy Nonlinear Model |
| easyORtables | Easy Odds Ratio Tables |
| easypackages | Easy Loading and Installing of Packages |
| easypower | Sample Size Estimation for Experimental Designs |
| easyPSID | Reading, Formatting, and Organizing the Panel Study of Income Dynamics (PSID) |
| easyPubMed | Search and Retrieve Scientific Publication Records from PubMed |
| easyr | Helpful Functions from Oliver Wyman Actuarial Consulting |
| easyreg | Easy Regression |
| easySdcTable | Easy Interface to the Statistical Disclosure Control Package 'sdcTable' Extended with Own Implementation of 'GaussSuppression' |
| easySimData | A Wrapper of 'simdata' Package |
| easystats | Framework for Easy Statistical Modeling, Visualization, and Reporting |
| easysurv | Simplify Survival Data Analysis and Model Fitting |
| easySVG | An Easy SVG Basic Elements Generator |
| easyVerification | Ensemble Forecast Verification for Large Data Sets |
| eat | Efficiency Analysis Trees |
| eatATA | Create Constraints for Small Test Assembly Problems |
| eatDB | Spreadsheet Interface for Relational Databases |
| eatGADS | Data Management of Large Hierarchical Data |
| EATME | Exponentially Weighted Moving Average with Adjustments to Measurement Error |
| eatRep | Educational Assessment Tools for Replication Methods |
| eatTools | Miscellaneous Functions for the Analysis of Educational Assessments |
| eba | Elimination-by-Aspects Models |
| ebal | Entropy Reweighting to Create Balanced Samples |
| EBASE | Estuarine Bayesian Single-Station Estimation Method for Ecosystem Metabolism |
| EbayesThresh | Empirical Bayes Thresholding and Related Methods |
| EBCHS | An Empirical Bayes Method for Chi-Squared Data |
| ebci | Robust Empirical Bayes Confidence Intervals |
| EBcoBART | Co-Data Learning for Bayesian Additive Regression Trees |
| ebdbNet | Empirical Bayes Estimation of Dynamic Bayesian Networks |
| EBEN | Empirical Bayesian Elastic Net |
| ebGenotyping | Genotyping and SNP Detection using Next Generation Sequencing Data |
| ebirdst | Access and Analyze eBird Status and Trends Data Products |
| EBMAforecast | Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms |
| ebmc | Ensemble-Based Methods for Class Imbalance Problem |
| ebmstate | Empirical Bayes Multi-State Cox Model |
| ebnm | Solve the Empirical Bayes Normal Means Problem |
| EBPRS | Derive Polygenic Risk Score Based on Emprical Bayes Theory |
| EBrank | Empirical Bayes Ranking |
| ebreg | Implementation of the Empirical Bayes Method |
| eBsc | "Empirical Bayes Smoothing Splines with Correlated Errors" |
| ebTobit | Empirical Bayesian Tobit Matrix Estimation |
| ebvcube | Working with netCDF for Essential Biodiversity Variables |
| ec50estimator | An Automated Way to Estimate EC50 for Stratified Datasets |
| ecan | Ecological Analysis and Visualization |
| eCAR | Eigenvalue CAR Models |
| ecb | Programmatic Access to the European Central Bank's Statistical Data Warehouse |
| ecce | Translate English Sentence into Chinese, or Translate Chinese Sentence into English |
| Ecdat | Data Sets for Econometrics |
| ecdata | Loads Data from the Executive Communications Dataset |
| ecdfHT | Empirical CDF for Heavy Tailed Data |
| eCerto | Statistical Tests for the Production of Reference Materials |
| ecespa | Functions for Spatial Point Pattern Analysis |
| Ecfun | Functions for 'Ecdat' |
| ECG | Center of Gravity Methods |
| ECGofTestDx | A Goodness-of-Fit Test for Elliptical Distributions with Diagnostic Capabilities |
| ech | Downloading and Processing Microdata from ECH-INE (Uruguay) |
| ECharts2Shiny | Embedding Interactive Charts Generated with ECharts Library into Shiny Applications |
| echarts4r | Create Interactive Graphs with 'Echarts JavaScript' Version 5 |
| echarty | Minimal R/Shiny Interface to JavaScript Library 'ECharts' |
| echelon | The Echelon Analysis and the Detection of Spatial Clusters using Echelon Scan Method |
| eChem | Simulations for Electrochemistry Experiments |
| echo | Echo Code Evaluations |
| echo.find | Finding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO) |
| echogram | Echogram Visualisation and Analysis |
| echoice2 | Choice Models with Economic Foundation |
| echor | Access EPA 'ECHO' Data |
| ecic | Extended Changes-in-Changes |
| ecipex | Efficient Calculation of Fine Structure Isotope Patterns via Fourier Transforms of Simplex-Based Elemental Models |
| ECLRMC | Ensemble Correlation-Based Low-Rank Matrix Completion |
| eclust | Environment Based Clustering for Interpretable Predictive Models in High Dimensional Data |
| ecm | Build Error Correction Models |
| ecmwfr | Interface to 'ECMWF' and 'CDS' Data Web Services |
| ecocbo | Calculating Optimum Sampling Effort in Community Ecology |
| ecochange | Integrating Ecosystem Remote Sensing Products to Derive EBV Indicators |
| ecocomDP | Tools to Create, Use, and Convert ecocomDP Data |
| ecoCopula | Graphical Modelling and Ordination using Copulas |
| ecode | Ordinary Differential Equation Systems in Ecology |
| EcoDiet | Estimating a Diet Matrix from Biotracer and Stomach Content Data |
| ecodist | Dissimilarity-Based Functions for Ecological Analysis |
| EcoEnsemble | A General Framework for Combining Ecosystem Models |
| Ecohydmod | Ecohydrological Modelling |
| EcoIndR | Ecological Indicators |
| ECoL | Complexity Measures for Supervised Problems |
| ecolMod | "A Practical Guide to Ecological Modelling - Using R as a Simulation Platform" |
| ecolottery | Coalescent-Based Simulation of Ecological Communities |
| ecolRxC | Ecological Inference of RxC Tables by Latent Structure Approaches |
| ecolTest | Community Ecology Tests |
| EconAndProdEfficiency | Economic and Production Efficiency |
| EconDemand | General Analysis of Various Economics Demand Systems |
| econet | Estimation of Parameter-Dependent Network Centrality Measures |
| EcoNetGen | Simulate and Sample from Ecological Interaction Networks |
| econetwork | Analyzing Ecological Networks |
| EconGeo | Computing Key Indicators of the Spatial Distribution of Economic Activities |
| economiccomplexity | Computational Methods for Economic Complexity |
| econullnetr | Null Model Analysis for Ecological Networks |
| ecopower | Power Estimates and Equivalence Testing for Multivariate Data |
| ecoreg | Ecological Regression using Aggregate and Individual Data |
| ecoregime | Analysis of Ecological Dynamic Regimes |
| ecorest | Conducts Analyses Informing Ecosystem Restoration Decisions |
| ecos | Economic Statistics System of the Bank of Korea |
| ecosim | Toolbox for Aquatic Ecosystem Modeling |
| ECOSolveR | Embedded Conic Solver in R |
| ecospace | Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks |
| ecospat | Spatial Ecology Miscellaneous Methods |
| ecostats | Code and Data Accompanying the Eco-Stats Text (Warton 2022) |
| ecostatscale | Statistical Scaling Functions for Ecological Systems |
| EcotoneFinder | Characterising and Locating Ecotones and Communities |
| ecotox | Analysis of Ecotoxicology |
| ecotoxicology | Methods for Ecotoxicology |
| ECOTOXr | Download and Extract Data from US EPA's ECOTOX Database |
| ecotraj | Ecological Trajectory Analysis |
| EcoTroph | An Implementation of the EcoTroph Ecosystem Modelling Approach |
| ecoval | Procedures for Ecological Assessment of Surface Waters |
| EcoVirtual | Simulation of Ecological Models |
| ecp | Non-Parametric Multiple Change-Point Analysis of Multivariate Data |
| ecpc | Flexible Co-Data Learning for High-Dimensional Prediction |
| ecpdist | Extended Chen-Poisson Lifetime Distribution |
| ecr | Evolutionary Computation in R |
| ectotemp | Quantitative Estimates of Small Ectotherm Temperature Regulation Effectiveness |
| ECTSVR | Cointegration Based Support Vector Regression Model |
| ECTTDNN | Cointegration Based Timedelay Neural Network Model |
| Ecume | Equality of 2 (or k) Continuous Univariate and Multivariate Distributions |
| eCV | Enhanced Coefficient of Variation and IDR Extensions for Reproducibility Assessment |
| ed50 | Estimate ED50 and Its Confidence Interval |
| ed50simulation | Estimate ED50 and Its Confidence Interval |
| eda4treeR | Experimental Design and Analysis for Tree Improvement |
| EDCimport | Import Data from EDC Software |
| edcpR | Ecological Data Collection and Processing Package |
| eddington | Compute a Cyclist's Eddington Number |
| edeaR | Exploratory and Descriptive Event-Based Data Analysis |
| edecob | Event Detection Using Confidence Bounds |
| edf | Read Data from European Data Format (EDF and EDF+) Files |
| edfReader | Reading EDF(+) and BDF(+) Files |
| EDFtest | Goodness of Fit Based on Empirical Distribution Function |
| edfun | Creating Empirical Distribution Functions |
| edgar | Tool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate Filings |
| edgarWebR | SEC Filings Access |
| edgebundle | Algorithms for Bundling Edges in Networks and Visualizing Flow and Metro Maps |
| edgebundleR | Circle Plot with Bundled Edges |
| edgeCorr | Spatial Edge Correction |
| edgedata | Datasets that Support the EDGE Server DIY Logic |
| edibble | Encapsulating Elements of Experimental Design |
| ediblecity | Modeling Urban Agriculture at City Scale |
| edina | Bayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model |
| EDISON | Network Reconstruction and Changepoint Detection |
| editbl | 'DT' Extension for CRUD (Create, Read, Update, Delete) Applications in 'shiny' |
| editData | 'RStudio' Addin for Editing a 'data.frame' |
| eDITH | Model Transport of Environmental DNA in River Networks |
| editrules | Parsing, Applying, and Manipulating Data Cleaning Rules |
| EDIutils | An API Client for the Environmental Data Initiative Repository |
| edl | Toolbox for Error-Driven Learning Simulations with Two-Layer Networks |
| edlibR | R Integration for Edlib, the C/C++ Library for Exact Pairwise Sequence Alignment using Edit (Levenshtein) Distance |
| eDMA | Dynamic Model Averaging with Grid Search |
| edmcr | Euclidean Distance Matrix Completion Tools |
| edmdata | Data Sets for Psychometric Modeling |
| eDNAjoint | Joint Modeling of Traditional and Environmental DNA Survey Data in a Bayesian Framework |
| EDNE.EQ | Implements the EDNE-Test for Equivalence |
| EDOIF | Empirical Distribution Ordering Inference Framework (EDOIF) |
| EDOtrans | Euclidean Distance-Optimized Data Transformation |
| edstan | Stan Models for Item Response Theory |
| EdSurvey | Analysis of NCES Education Survey and Assessment Data |
| educationdata | Retrieve Records from the Urban Institute's Education Data Portal API |
| educineq | Compute and Decompose Inequality in Education |
| edwards97 | Langmuir Semi-Empirical Coagulation Model |
| eefAnalytics | Robust Analytical Methods for Evaluating Educational Interventions using Randomised Controlled Trials Designs |
| eegkit | Toolkit for Electroencephalography Data |
| eegkitdata | Electroencephalography Toolkit Datasets |
| EEM | Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data |
| eemdARIMA | EEMD Based Auto Regressive Integrated Moving Average Model |
| EEMDelm | Ensemble Empirical Mode Decomposition and Its Variant Based ELM Model |
| EEMDlstm | EEMD Based LSTM Model for Time Series Forecasting |
| EEMDSVR | Ensemble Empirical Mode Decomposition and Its Variant Based Support Vector Regression Model |
| eemdTDNN | EEMD and Its Variant Based Time Delay Neural Network Model |
| EEML | Ensemble Explainable Machine Learning Models |
| eemR | Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data |
| eeptools | Convenience Functions for Education Data |
| eesim | Simulate and Evaluate Time Series for Environmental Epidemiology |
| EESPCA | Eigenvectors from Eigenvalues Sparse Principal Component Analysis (EESPCA) |
| ef | Modelling Framework for the Estimation of Salmonid Abundance |
| EFA.dimensions | Exploratory Factor Analysis Functions for Assessing Dimensionality |
| EFA.MRFA | Dimensionality Assessment Using Minimum Rank Factor Analysis |
| EFAfactors | Determining the Number of Factors in Exploratory Factor Analysis |
| EFAtools | Fast and Flexible Implementations of Exploratory Factor Analysis Tools |
| EFAutilities | Utility Functions for Exploratory Factor Analysis |
| efdm | Simulate Forest Resources with the European Forestry Dynamics Model |
| EFDR | Wavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data |
| eff2 | Efficient Least Squares for Total Causal Effects |
| effClust | Calculate Effective Number of Clusters for a Linear Model |
| EffectLiteR | Average and Conditional Effects |
| effectplots | Effect Plots |
| effectR | Predicts Oomycete Effectors |
| effects | Effect Displays for Linear, Generalized Linear, and Other Models |
| effectsize | Indices of Effect Size |
| effectsizescr | Indices for Single-Case Research |
| EffectStars | Visualization of Categorical Response Models |
| EffectStars2 | Effect Stars |
| EffectTreat | Prediction of Therapeutic Success |
| EfficientMaxEigenpair | Efficient Initials for Computing the Maximal Eigenpair |
| efflog | The Causal Effects for a Causal Loglinear Model |
| effsize | Efficient Effect Size Computation |
| eFRED | Fetch Data from the Federal Reserve Economic Database |
| EFS | Tool for Ensemble Feature Selection |
| ega | Error Grid Analysis |
| EGAnet | Exploratory Graph Analysis – a Framework for Estimating the Number of Dimensions in Multivariate Data using Network Psychometrics |
| egcm | Engle-Granger Cointegration Models |
| egg | Extensions for 'ggplot2': Custom Geom, Custom Themes, Plot Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel Size |
| eggCounts | Hierarchical Modelling of Faecal Egg Counts |
| eglhmm | Extended Generalised Linear Hidden Markov Models |
| EGM | Evaluating Cardiac Electrophysiology Signals |
| EgoCor | Simple Presentation of Estimated Exponential Semi-Variograms |
| egor | Import and Analyse Ego-Centered Network Data |
| EGRET | Exploration and Graphics for RivEr Trends |
| EGRETci | Exploration and Graphics for RivEr Trends Confidence Intervals |
| EGRNi | Ensemble Gene Regulatory Network Inference |
| eGST | Leveraging eQTLs to Identify Individual-Level Tissue of Interest for a Complex Trait |
| eha | Event History Analysis |
| ehaGoF | Calculates Goodness of Fit Statistics |
| eHDPrep | Quality Control and Semantic Enrichment of Datasets |
| ehelp | Enhanced Help to Enable "Docstring"-Comments in Users Functions |
| eHOF | Extended HOF (Huisman-Olff-Fresco) Models |
| EHR | Electronic Health Record (EHR) Data Processing and Analysis Tool |
| EHRtemporalVariability | Delineating Temporal Dataset Shifts in Electronic Health Records |
| ehymet | Methodologies for Functional Data Based on the Epigraph and Hypograph Indices |
| ei | Ecological Inference |
| ei.Datasets | Real Datasets for Assessing Ecological Inference Algorithms |
| eia | API Wrapper for U.S. Energy Information Administration ('EIA') Open Data |
| EIAapi | Query Data from the 'EIA' API |
| eiCircles | Ecological Inference of RxC Tables by Overdispersed-Multinomial Models |
| eicm | Explicit Interaction Community Models |
| eider | Declarative Feature Extraction from Tabular Data Records |
| EIEntropy | Ecological Inference Applying Entropy |
| eiExpand | Utilities for Expanding Functionality of 'eiCompare' |
| eigenmodel | Semiparametric Factor and Regression Models for Symmetric Relational Data |
| EigenR | Complex Matrix Algebra with 'Eigen' |
| eikosograms | The Picture of Probability |
| eimpute | Efficiently Impute Large Scale Incomplete Matrix |
| einet | Effective Information and Causal Emergence |
| einsum | Einstein Summation |
| eiopaR | Access to RFR (Risk-Free Rate) Curves Produced by the EIOPA |
| eiPack | Ecological Inference and Higher-Dimension Data Management |
| eirm | Explanatory Item Response Modeling for Dichotomous and Polytomous Items |
| eive | An Algorithm for Reducing Errors-in-Variable Bias in Simple and Multiple Linear Regressions |
| eivtools | Measurement Error Modeling Tools |
| EIX | Explain Interactions in 'XGBoost' |
| eixport | Export Emissions to Atmospheric Models |
| EKMCMC | MCMC Procedures for Estimating Enzyme Kinetics Constants |
| eks | Tidy and Geospatial Kernel Smoothing |
| EL | Two-Sample Empirical Likelihood |
| EL2Surv | Empirical Likelihood (EL) for Comparing Two Survival Functions |
| elaborator | A 'shiny' Application for Exploring Laboratory Data |
| elasdics | Elastic Analysis of Sparse, Dense and Irregular Curves |
| elasso | Enhanced Least Absolute Shrinkage and Selection Operator Regression Model |
| elastes | Elastic Full Procrustes Means for Sparse and Irregular Planar Curves |
| elastic | General Purpose Interface to 'Elasticsearch' |
| elasticnet | Elastic-Net for Sparse Estimation and Sparse PCA |
| elec | Collection of Functions for Statistical Election Audits |
| EleChemr | Electrochemical Reactions Simulation |
| elect | Estimation of Life Expectancies Using Multi-State Models |
| ElectDecomp | Decomposition of Seats-to-Votes Distortion in Multimember Elections |
| elections | USA Presidential Elections Data |
| elections.dtree | Ranked Voting Election Audits with Dirichlet-Trees |
| electionsBR | R Functions to Download and Clean Brazilian Electoral Data |
| electivity | Algorithms for Electivity Indices |
| electoral | Allocating Seats Methods and Party System Scores |
| elevatr | Access Elevation Data from Various APIs |
| ElevDistr | Calculate the Distance to the Nearest Local Treeline |
| elexr | Load Associated Press Election Results with Elex |
| elfDistr | Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution |
| elgbd | Empirical Likelihood for General Block Designs |
| elhmc | Sampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo |
| ELISAtools | ELISA Data Analysis with Batch Correction |
| elisr | Exploratory Likert Scaling |
| eList | List Comprehension and Tools |
| elitism | Equipment for Logarithmic and Linear Time Stepwise Multiple Hypothesis Testing |
| Elja | Linear, Logistic and Generalized Linear Models Regressions for the EnvWAS/EWAS Approach |
| elliplot | Ellipse Summary Plot of Quantiles |
| ellipse | Functions for Drawing Ellipses and Ellipse-Like Confidence Regions |
| ellipsis | Tools for Working with ... |
| ElliptCopulas | Inference of Elliptical Distributions and Copulas |
| elliptic | Weierstrass and Jacobi Elliptic Functions |
| ellipticalsymmetry | Elliptical Symmetry Tests |
| elmNNRcpp | The Extreme Learning Machine Algorithm |
| ELMR | Extreme Machine Learning (ELM) |
| ELMSO | Implementation of the Efficient Large-Scale Online Display Advertising Algorithm |
| eLNNpairedCov | Model-Based Gene Selection for Paired Data |
| elo | Ranking Teams by Elo Rating and Comparable Methods |
| EloChoice | Preference Rating for Visual Stimuli Based on Elo Ratings |
| EloOptimized | Optimized Elo Rating Method for Obtaining Dominance Ranks |
| EloRating | Animal Dominance Hierarchies by Elo Rating |
| EloSteepness | Bayesian Dominance Hierarchy Steepness via Elo Rating and David's Scores |
| elsa | Entropy-Based Local Indicator of Spatial Association |
| ELT | Experience Life Tables |
| eltr | Utilise Catastrophe Model Event Loss Table Outputs |
| ELYP | Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model |
| em | Generic EM Algorithm |
| EM.Fuzzy | EM Algorithm for Maximum Likelihood Estimation by Non-Precise Information |
| emailjsr | 'emailjs' Support |
| emailvalidation | Client for the 'emailalvalidation.io' E-Mail Validation API |
| EMAR | Empirical Model Assessment |
| EMAS | Epigenome-Wide Mediation Analysis Study |
| emayili | Send Email Messages |
| emBayes | Robust Bayesian Variable Selection via Expectation-Maximization |
| EMbC | Expectation-Maximization Binary Clustering |
| embed | Extra Recipes for Encoding Predictors |
| EmbedSOM | Fast Embedding Guided by Self-Organizing Map |
| embryogrowth | Tools to Analyze the Thermal Reaction Norm of Embryo Growth |
| EMC2 | Bayesian Hierarchical Analysis of Cognitive Models of Choice |
| EMCluster | EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution |
| EMD | Empirical Mode Decomposition and Hilbert Spectral Analysis |
| EMDANNhybrid | Empirical Mode Decomposition Based Artificial Neural Network Model |
| emdbook | Support Functions and Data for "Ecological Models and Data" |
| emdi | Estimating and Mapping Disaggregated Indicators |
| emdist | Earth Mover's Distance |
| EMDSVRhybrid | Empirical Mode Decomposition Based Support Vector Regression Model |
| emery | Accuracy Statistic Estimation for Imperfect Gold Standards |
| emg | Exponentially Modified Gaussian (EMG) Distribution |
| EMgaussian | Expectation-Maximization Algorithm for Multivariate Normal (Gaussian) with Missing Data |
| emhawkes | Exponential Multivariate Hawkes Model |
| EmiR | Evolutionary Minimizer for R |
| emIRT | EM Algorithms for Estimating Item Response Theory Models |
| EmissV | Tools for Create Emissions for Air Quality Models |
| EmiStatR | Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems |
| EMJMCMC | Evolutionary Mode Jumping Markov Chain Monte Carlo Expert Toolbox |
| EML | Read and Write Ecological Metadata Language Files |
| emld | Ecological Metadata as Linked Data |
| EMLI | Computationally Efficient Maximum Likelihood Identification of Linear Dynamical Systems |
| EMMAgeo | End-Member Modelling of Grain-Size Data |
| emmeans | Estimated Marginal Means, aka Least-Squares Means |
| EMMIXgene | A Mixture Model-Based Approach to the Clustering of Microarray Expression Data |
| EMMIXmfa | Mixture Models with Component-Wise Factor Analyzers |
| EMMIXSSL | Semi-Supervised Gaussian Mixture Model with a Missing-Data Mechanism |
| EMMLi | A Maximum Likelihood Approach to the Analysis of Modularity |
| EMMREML | Fitting Mixed Models with Known Covariance Structures |
| emoa | Evolutionary Multiobjective Optimization Algorithms |
| emoji | Data and Function to Work with Emojis |
| emojifont | Emoji and Font Awesome in Graphics |
| emon | Tools for Environmental and Ecological Survey Design |
| emov | Eye Movement Analysis Package for Fixation and Saccade Detection |
| EMP | Expected Maximum Profit Classification Performance Measure |
| EMpeaksR | Conducting the Peak Fitting Based on the EM Algorithm |
| emphatic | Exploratory Analysis of Tabular Data using Colour Highlighting |
| empichar | Evaluates the Empirical Characteristic Function for Multivariate Samples |
| EmpiricalCalibration | Routines for Performing Empirical Calibration of Observational Study Estimates |
| emplik | Empirical Likelihood Ratio for Censored/Truncated Data |
| emplik2 | Empirical Likelihood Ratio Test for Two-Sample U-Statistics with Censored Data |
| emplikAUC | Empirical Likelihood Ratio Test/Confidence Interval for AUC or pAUC |
| ems | Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units |
| EMSaov | The Analysis of Variance with EMS |
| EMSC | Extended Multiplicative Signal Correction |
| EMSNM | EM Algorithm for Sigmoid Normal Model |
| EMSS | Some EM-Type Estimation Methods for the Heckman Selection Model |
| emstreeR | Tools for Fast Computing and Visualizing Euclidean Minimum Spanning Trees |
| EMT | Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate Data |
| emulator | Bayesian Emulation of Computer Programs |
| emuR | Main Package of the EMU Speech Database Management System |
| EncDNA | Encoding of Nucleotide Sequences into Numeric Feature Vectors |
| eNchange | Ensemble Methods for Multiple Change-Point Detection |
| encode | Represent Ordered Lists and Pairs as Strings |
| EncompassTest | Direct Multi-Step Forecast Based Comparison of Nested Models via an Encompassing Test |
| encryptedRmd | Encrypt Html Reports Using 'Libsodium' |
| encryptr | Easily Encrypt and Decrypt Data Frame/Tibble Columns or Files using RSA Public/Private Keys |
| enderecobr | Padronizador de Endereços Brasileiros (Brazilian Addresses Standardizer) |
| endogeneity | Recursive Two-Stage Models to Address Endogeneity |
| endogenous | Classical Simultaneous Equation Models |
| endorse | Bayesian Measurement Models for Analyzing Endorsement Experiments |
| endoSwitch | Endogenous Switching Regression Models |
| endtoend | Transmissions and Receptions in an End to End Network |
| energy | E-Statistics: Multivariate Inference via the Energy of Data |
| EnergyOnlineCPM | Distribution Free Multivariate Control Chart Based on Energy Test |
| energyr | Data Published by the United States Federal Energy Regulatory Commission |
| enerscape | Compute Energy Landscapes |
| enetLTS | Robust and Sparse Methods for High Dimensional Linear and Binary and Multinomial Regression |
| english | Translate Integers into English |
| EngrEcon | Engineering Economics Analysis for Engineering Projects Cost Analysis |
| engression | Engression Modelling |
| EngrExpt | Data sets from "Introductory Statistics for Engineering Experimentation" |
| ENMeval | Automated Tuning and Evaluations of Ecological Niche Models |
| enmpa | Ecological Niche Modeling using Presence-Absence Data |
| enmSdmX | Species Distribution Modeling and Ecological Niche Modeling |
| ENMTools | Analysis of Niche Evolution using Niche and Distribution Models |
| enpls | Ensemble Partial Least Squares Regression |
| EnrichIntersect | Enrichment Analysis and Intersecting Sankey Diagram |
| enrichwith | Methods to Enrich R Objects with Extra Components |
| EnsCat | Clustering of Categorical Data |
| EnsembleBase | Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling |
| ensembleBMA | Probabilistic Forecasting using Ensembles and Bayesian Model Averaging |
| EnsembleCV | Extensible Package for Cross-Validation-Based Integration of Base Learners |
| ensembleMOS | Ensemble Model Output Statistics |
| EnsemblePCReg | Extensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning |
| EnsemblePenReg | Extensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners |
| ensemblepp | Ensemble Postprocessing Data Sets |
| ensembleTax | Ensemble Taxonomic Assignments of Amplicon Sequencing Data |
| enshuman | Human Gene Annotation Data from 'Ensembl' |
| ensr | Elastic Net SearcheR |
| entropart | Entropy Partitioning to Measure Diversity |
| EntropicStatistics | Functions Based on Entropic Statistics |
| entropy | Estimation of Entropy, Mutual Information and Related Quantities |
| EntropyEstimation | Estimation of Entropy and Related Quantities |
| EntropyMCMC | MCMC Simulation and Convergence Evaluation using Entropy and Kullback-Leibler Divergence Estimation |
| entrymodels | Estimate Entry Models |
| envalysis | Miscellaneous Functions for Environmental Analyses |
| EnvCpt | Detection of Structural Changes in Climate and Environment Time Series |
| envDocument | Document the R Working Environment |
| enveomics.R | Various Utilities for Microbial Genomics and Metagenomics |
| envi | Environmental Interpolation using Spatial Kernel Density Estimation |
| enviGCMS | GC/LC-MS Data Analysis for Environmental Science |
| enviPat | Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry |
| envir | Manage R Environments Better |
| envirem | Generation of ENVIREM Variables |
| EnviroPRA2 | Environmental Probabilistic Risk Assessment Tools |
| envnames | Keep Track of User-Defined Environment Names |
| EnvNicheR | Niche Estimation |
| EnvNJ | Whole Genome Phylogenies Using Sequence Environments |
| envoutliers | Methods for Identification of Outliers in Environmental Data |
| envstat | Configurable Reporting on your External Compute Environment |
| EnvStats | Package for Environmental Statistics, Including US EPA Guidance |
| envvar | Make Working with Environment Variables Easier and More Consistent |
| eoa3 | Wildlife Mortality Estimator for Low Fatality Rates and Imperfect Detection |
| eodhdR2 | Official R API for Fetching Data from 'EODHD' |
| eoffice | Export or Graph and Tables to 'Microsoft' Office and Import Figures and Tables |
| eoR | Data Management Package (Exposure and Occurrence Data in R) |
| epade | Easy Plots |
| epandist | Statistical Functions for the Censored and Uncensored Epanechnikov Distribution |
| epanet2toolkit | Call 'EPANET' Functions to Simulate Pipe Networks |
| epanetReader | Read Epanet Files into R |
| epca | Exploratory Principal Component Analysis |
| ePCR | Ensemble Penalized Cox Regression for Survival Prediction |
| epe4md | EPE's 4MD Model to Forecast the Adoption of Distributed Generation |
| eph | Argentina's Permanent Household Survey Data and Manipulation Utilities |
| Epi | Statistical Analysis in Epidemiology |
| epibasix | Elementary Epidemiological Functions for Epidemiology and Biostatistics |
| epicasting | Ewnet: An Ensemble Wavelet Neural Network for Forecasting and Epicasting |
| epichains | Simulating and Analysing Transmission Chain Statistics Using Branching Process Models |
| epiCleanr | A Tidy Solution for Epidemiological Data |
| epicmodel | Causal Modeling in Epidemiology |
| epiCo | Statistical and Viz Tools for Vector-Borne Diseases in Colombia |
| epicontacts | Handling, Visualisation and Analysis of Epidemiological Contacts |
| EpiContactTrace | Epidemiological Tool for Contact Tracing |
| EpiCurve | Plot an Epidemic Curve |
| epidata | Tools to Retrieve Economic Policy Institute Data Library Extracts |
| epidatr | Client for Delphi's 'Epidata' API |
| epiDisplay | Epidemiological Data Display Package |
| epidm | UK Epidemiological Data Management |
| EpiDynamics | Dynamic Models in Epidemiology |
| EpiEstim | Estimate Time Varying Reproduction Numbers from Epidemic Curves |
| epifitter | Analysis and Simulation of Plant Disease Progress Curves |
| epiflows | Predicting Disease Spread from Flow Data |
| EpiForsk | Code Sharing at the Department of Epidemiological Research at Statens Serum Institut |
| epigraphdb | Interface Package for the 'EpiGraphDB' Platform |
| epigrowthfit | Nonlinear Mixed Effects Models of Epidemic Growth |
| EpiILM | Spatial and Network Based Individual Level Models for Epidemics |
| EpiILMCT | Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics |
| EpiInvert | Variational Techniques in Epidemiology |
| epikit | Miscellaneous Helper Tools for Epidemiologists |
| epilogi | The 'epilogi' Variable Selection Algorithm for Continuous Data |
| EpiLPS | A Fast and Flexible Bayesian Tool for Estimating Epidemiological Parameters |
| epimdr | Functions and Data for "Epidemics: Models and Data in R" |
| epimdr2 | Functions and Data for "Epidemics: Models and Data in R (2nd Edition)" |
| EpiModel | Mathematical Modeling of Infectious Disease Dynamics |
| epinet | Epidemic/Network-Related Tools |
| epinetr | Epistatic Network Modelling with Forward-Time Simulation |
| EpiNow2 | Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters |
| epiomics | Analysis of Omics Data in Observational Studies |
| epiphy | Analysis of Plant Disease Epidemics |
| epiR | Tools for the Analysis of Epidemiological Data |
| EpiReport | Epidemiological Report |
| episcan | Scan Pairwise Epistasis |
| EpiSemble | Ensemble Based Machine Learning Approach for Predicting Methylation States |
| episensr | Basic Sensitivity Analysis of Epidemiological Results |
| EpiSignalDetection | Signal Detection Analysis |
| EpiStats | Tools for Epidemiologists |
| EpistemicGameTheory | Constructing an Epistemic Model for the Games with Two Players |
| epitab | Flexible Contingency Tables for Epidemiology |
| EpiTest | Test for Gene x Gene Interactions in Bi-Parental Populations |
| epitools | Epidemiology Tools |
| epitrix | Small Helpers and Tricks for Epidemics Analysis |
| epitweetr | Early Detection of Public Health Threats from 'Twitter' Data |
| epiworldR | Fast Agent-Based Epi Models |
| epiworldRShiny | A 'shiny' Wrapper of the R Package 'epiworldR' |
| epizootic | Spatially Explicit Population Models of Disease Transmission in Wildlife |
| EPLSIM | Partial Linear Single Index Models for Environmental Mixture Analysis |
| eplusr | A Toolkit for Using Whole Building Simulation Program 'EnergyPlus' |
| eply | Apply a Function Over Expressions |
| epm | EcoPhyloMapper |
| epmrob | Robust Estimation of Probit Models with Endogeneity |
| epo | Enhanced Portfolio Optimization (EPO) |
| epocakir | Clinical Coding of Patients with Kidney Disease |
| eponge | Keep Your Environment Clean |
| epos | Epilepsy Ontologies' Similarities |
| epoxy | String Interpolation for Documents, Reports and Apps |
| epr | Easy Polynomial Regression |
| epsiwal | Exact Post Selection Inference with Applications to the Lasso |
| EPT | Ensemble Patch Transform, Visualization and Decomposition |
| epubr | Read EPUB File Metadata and Text |
| epwshiftr | Create Future 'EnergyPlus' Weather Files using 'CMIP6' Data |
| EPX | Ensemble of Phalanxes |
| epxToR | Import 'Epidata' XML Files '.epx' |
| eq5d | Methods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index Scores |
| eq5dsuite | Manipulating and Analysing EQ-5d Data |
| EQL | Extended-Quasi-Likelihood-Function (EQL) |
| equalCovs | Testing the Equality of Two Covariance Matrices |
| Equalden.HD | Testing the Equality of a High Dimensional Set of Densities |
| EQUALrepeat | Algorithm Driven Time Series Analysis for Researchers without Coding Skills |
| EQUALSTATS | Algorithm Driven Statistical Analysis for Researchers without Coding Skills |
| equaltestMI | Examine Measurement Invariance via Equivalence Testing and Projection Method |
| equatags | Equations to 'XML' |
| equate | Observed-Score Linking and Equating |
| equateIRT | IRT Equating Methods |
| equateMultiple | Equating of Multiple Forms |
| equatiomatic | Transform Models into 'LaTeX' Equations |
| equiBSPD | Equivalent Estimation Balanced Split Plot Designs |
| equil2 | Calculate Urinary Saturation with the EQUIL2 Algorithm |
| EquiSurv | Modeling, Confidence Intervals and Equivalence of Survival Curves |
| EquiTrends | Equivalence Testing for Pre-Trends in Difference-in-Differences Designs |
| equivalence | Provides Tests and Graphics for Assessing Tests of Equivalence |
| equivalenceTest | Equivalence Test for the Means of Two Normal Distributions |
| EQUIVNONINF | Testing for Equivalence and Noninferiority |
| equivUMP | Uniformly Most Powerful Invariant Tests of Equivalence |
| ER | Effect + Residual Modelling |
| era | Year-Based Time Scales |
| erah | Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics |
| eratosthenes | Archaeological Synchronism |
| ercv | Fitting Tails by the Empirical Residual Coefficient of Variation |
| ERDbuilder | Entity Relationship Diagrams Builder |
| erer | Empirical Research in Economics with R |
| erfe | Fits Expectile Regression for Panel Fixed Effect Model |
| ergm | Fit, Simulate and Diagnose Exponential-Family Models for Networks |
| ergm.count | Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges |
| ergm.ego | Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data |
| ergm.multi | Fit, Simulate and Diagnose Exponential-Family Models for Multiple or Multilayer Networks |
| ergm.rank | Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data |
| ergMargins | Process Analysis for Exponential Random Graph Models |
| ergmgp | Tools for Modeling ERGM Generating Processes |
| ergmharris | Local Health Department network data set |
| ergmito | Exponential Random Graph Models for Small Networks |
| erify | Check Arguments and Generate Readable Error Messages |
| eRm | Extended Rasch Modeling |
| ern | Effective Reproduction Number Estimation |
| ERP | Significance Analysis of Event-Related Potentials Data |
| erp.easy | Event-Related Potential (ERP) Data Exploration Made Easy |
| ERPeq | Probabilistic Hazard Assessment |
| ERPM | Exponential Random Partition Models |
| errorist | Automatically Search Errors or Warnings |
| errorlocate | Locate Errors with Validation Rules |
| errors | Uncertainty Propagation for R Vectors |
| errum | Exploratory Reduced Reparameterized Unified Model Estimation |
| ERSA | Exploratory Regression 'Shiny' App |
| eRTG3D | Empirically Informed Random Trajectory Generation in 3-D |
| es.dif | Compute Effect Sizes of the Difference |
| esaddle | Extended Empirical Saddlepoint Density Approximations |
| esaps | Indicators of Electoral Systems and Party Systems |
| esback | Expected Shortfall Backtesting |
| esc | Effect Size Computation for Meta Analysis |
| escalation | A Modular Approach to Dose-Finding Clinical Trials |
| esci | Estimation Statistics with Confidence Intervals |
| EScvtmle | Experiment-Selector CV-TMLE for Integration of Observational and RCT Data |
| esDesign | Adaptive Enrichment Designs with Sample Size Re-Estimation |
| eSDM | Ensemble Tool for Predictions from Species Distribution Models |
| eseis | Environmental Seismology Toolbox |
| eselect | Adaptive Clinical Trial Designs with Endpoint Selection and Sample Size Reassessment |
| esem | Exploratory Structural Equation Modeling ESEM |
| esemifar | Smoothing Long-Memory Time Series |
| ESG | A Package for Asset Projection |
| eshrink | Shrinkage for Effect Estimation |
| eSIR | Extended State-Space SIR Models |
| esmisc | Misc Functions of Eduard Szöcs |
| esmprep | Data Preparation During and After the Use of the Experience Sampling Methodology (ESM) |
| esmtools | Preprocessing Experience Sampling Method (ESM) Data |
| espadon | Easy Study of Patient DICOM Data in Oncology |
| esquisse | Explore and Visualize Your Data Interactively |
| esreg | Joint Quantile and Expected Shortfall Regression |
| ess | Efficient Stepwise Selection in Decomposable Models |
| essentials | Essential Functions not Included in Base R |
| essHist | The Essential Histogram |
| essurvey | Download Data from the European Social Survey on the Fly |
| estadistica | Fundamentos De Estadistica Descriptiva e Inferencial |
| estatapi | R Interface to e-Stat API |
| EstCRM | Calibrating Parameters for the Samejima's Continuous IRT Model |
| ESTER | Efficient Sequential Testing with Evidence Ratios |
| estimability | Tools for Assessing Estimability of Linear Predictions |
| EstimateGroupNetwork | Perform the Joint Graphical Lasso and Selects Tuning Parameters |
| estimateW | Estimation of Spatial Weight Matrices |
| EstimationTools | Maximum Likelihood Estimation for Probability Functions from Data Sets |
| estimators | Parameter Estimation |
| estimatr | Fast Estimators for Design-Based Inference |
| EstimDiagnostics | Diagnostic Tools and Unit Tests for Statistical Estimators |
| estimraw | Estimation of Four-Fold Table Cell Frequencies (Raw Data) from Effect Size Measures |
| estmeansd | Estimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis |
| EstMix | Tumor Clones Percentage Estimations |
| estprod | Estimation of Production Functions |
| esvis | Visualization and Estimation of Effect Sizes |
| et.nwfva | Forest Yield Tables for Northwest Germany and their Application |
| etable | Easy Table |
| ETAS | Modeling Earthquake Data Using 'ETAS' Model |
| ETASbootstrap | Bootstrap Confidence Interval Estimation for 'ETAS' Model Parameters |
| etasFLP | Mixed FLP and ML Estimation of ETAS Space-Time Point Processes for Earthquake Description |
| ETC | Equivalence to Control |
| ethnobotanyR | Calculate Quantitative Ethnobotany Indices |
| EthSEQ | Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data |
| etl | Extract-Transform-Load Framework for Medium Data |
| ETLUtils | Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data |
| etm | Empirical Transition Matrix |
| etrader | 'ETRADE' API Interface for R |
| etree | Classification and Regression with Structured and Mixed-Type Data |
| ETRep | Analysis of Elliptical Tubes Under the Relative Curvature Condition |
| etrm | Energy Trading and Risk Management |
| etrunct | Computes Moments of Univariate Truncated t Distribution |
| etwfe | Extended Two-Way Fixed Effects |
| EuclideanSD | An Euclidean View of Center and Spread |
| Euclimatch | Euclidean Climatch Algorithm |
| eudract | Creates Safety Results Summary in XML to Upload to EudraCT, or ClinicalTrials.gov |
| eufmdis.adapt | Analyse 'EuFMDiS' Output Files via a Shiny App |
| EUfootball | Football Match Data of European Leagues |
| eulerian | eulerian: A package to find eulerian paths from graphs |
| eulerr | Area-Proportional Euler and Venn Diagrams with Ellipses |
| eummd | Efficient Univariate Maximum Mean Discrepancy |
| eunis.habitats | EUNIS Habitat Classification |
| Eunomia | Standard Dataset Manager for Observational Medical Outcomes Partnership Common Data Model Sample Datasets |
| eurlex | Retrieve Data on European Union Law |
| eurocordexr | Makes it Easier to Work with Daily 'netCDF' from EURO-CORDEX RCMs |
| eurodata | Fast and Easy Eurostat Data Import and Search |
| euroleaguer | 'Euroleague basketball API' |
| europeanaR | Interact with Metadata Records and Media on the Europeana Repository |
| europepmc | R Interface to the Europe PubMed Central RESTful Web Service |
| europop | Historical Populations of European Cities, 1500-1800 |
| eurostat | Tools for Eurostat Open Data |
| eva | Extreme Value Analysis with Goodness-of-Fit Testing |
| evabic | Evaluation of Binary Classifiers |
| Evacluster | Evaluation Clustering Methods for Disease Subtypes Diagnosis |
| evalITR | Evaluating Individualized Treatment Rules |
| evalR | Evaluation of Unverified Code |
| evaluate | Parsing and Evaluation Tools that Provide More Details than the Default |
| EvaluateCore | Quality Evaluation of Core Collections |
| EvaluationMeasures | Collection of Model Evaluation Measure Functions |
| EValue | Sensitivity Analyses for Unmeasured Confounding and Other Biases in Observational Studies and Meta-Analyses |
| evapoRe | Evapotranspiration R Recipes |
| Evapotranspiration | Modelling Actual, Potential and Reference Crop Evapotranspiration |
| EVchargcost | Computes and Plot the Optimal Charging Strategy for Electric Vehicles |
| evclass | Evidential Distance-Based Classification |
| evclust | Evidential Clustering |
| EvCombR | Evidence Combination in R |
| evd | Functions for Extreme Value Distributions |
| evdbayes | Bayesian Analysis in Extreme Value Theory |
| evenBreak | A Posteriori Probs of Suits Breaking Evenly Across Four Hands |
| event | Event History Procedures and Models |
| eventdataR | Event Data Repository |
| EventDetectGUI | Graphical User Interface for the 'EventDetectR' Package |
| EventDetectR | Event Detection Framework |
| eventglm | Regression Models for Event History Outcomes |
| eventInterval | Sequential Event Interval Analysis |
| eventPred | Event Prediction |
| EventPredInCure | Event Prediction Including Cured Population |
| eventstream | Streaming Events and their Early Classification |
| eventstudyr | Estimation and Visualization of Linear Panel Event Studies |
| eventTrack | Event Prediction for Time-to-Event Endpoints |
| EventWinRatios | Event-Specific Win Ratios for Terminal and Non-Terminal Events |
| evgam | Generalised Additive Extreme Value Models |
| EVI | Epidemic Volatility Index as an Early-Warning Tool |
| evian | Evidential Analysis of Genetic Association Data |
| evidence | Analysis of Scientific Evidence Using Bayesian and Likelihood Methods |
| evidenceFactors | Reporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies |
| EvidenceSynthesis | Synthesizing Causal Evidence in a Distributed Research Network |
| evident | Evidence Factors in Observational Studies |
| EviewsR | A Seamless Integration of 'EViews' and R |
| evilDice | Test Dice Sets for Intransitive Properties |
| evinf | Inference with Extreme Value Inflated Count Data |
| evir | Extreme Values in R |
| evitaicossa | Antiassociative Algebra |
| evmix | Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation |
| evobiR | Comparative and Population Genetic Analyses |
| evola | Evolutionary Algorithm |
| evolMap | Dynamic and Interactive Maps |
| evolqg | Evolutionary Quantitative Genetics |
| EvolutionaryGames | Important Concepts of Evolutionary Game Theory |
| evolvability | Calculation of Evolvability Parameters |
| Evomorph | Evolutionary Morphometric Simulation |
| evoper | Evolutionary Parameter Estimation for 'Repast Simphony' Models |
| EvoPhylo | Pre- And Postprocessing of Morphological Data from Relaxed Clock Bayesian Phylogenetics |
| evoTS | Analyses of Evolutionary Time-Series |
| evprof | Electric Vehicle Charging Sessions Profiling and Modelling |
| evreg | Evidential Regression |
| evsim | Electric Vehicle Charging Sessions Simulation |
| evt0 | Mean of Order P, Peaks over Random Threshold Hill and High Quantile Estimates |
| evtclass | Extreme Value Theory for Open Set Classification - GPD and GEV Classifiers |
| evtree | Evolutionary Learning of Globally Optimal Trees |
| EWGoF | Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions |
| ewoc | Escalation with Overdose Control |
| EWOC.Comb | Escalation with Overdose Control using 2 Drug Combinations |
| ewp | An Empirical Model for Underdispersed Count Data |
| EwR | Econometrics with R |
| EWS | Early Warning System |
| EWSmethods | Forecasting Tipping Points at the Community Level |
| Exact | Unconditional Exact Test |
| exact.n | Exact Samples Sizes and Inference for Clinical Trials with Binary Endpoint |
| exact2x2 | Exact Tests and Confidence Intervals for 2x2 Tables |
| exactamente | Explore the Exact Bootstrap Method |
| exactci | Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases |
| ExactCIdiff | Inductive Confidence Intervals for the Difference Between Two Proportions |
| ExactCIone | Admissible Exact Intervals for One-Dimensional Discrete Distributions |
| ExactCox | Exact Test and Exact Confidence Interval for the Cox Model |
| exactextractr | Fast Extraction from Raster Datasets using Polygons |
| exactLTRE | An Exact Method for Life Table Response Experiment (LTRE) Analysis |
| ExactMed | Exact Mediation Analysis for Binary Outcomes |
| ExactMultinom | Multinomial Goodness-of-Fit Tests |
| exactRankTests | Exact Distributions for Rank and Permutation Tests |
| ExamPAData | Data Sets for Predictive Analytics Exam |
| exampletestr | Help for Writing Unit Tests Based on Function Examples |
| exams | Automatic Generation of Exams in R |
| exams.forge | Support for Compiling Examination Tasks using the 'exams' Package |
| exams.mylearn | Question Generation in the 'MyLearn' XML Format |
| exams2forms | Embedding 'exams' Exercises as Forms in 'rmarkdown' or 'quarto' Documents |
| exams2learnr | Interface for 'exams' Exercises in 'learnr' Tutorials |
| exams2sakai | Automatic Generation of Exams in R for 'Sakai' |
| ExceedanceTools | Confidence/Credible Regions for Exceedance Sets and Contour Lines |
| exceedProb | Confidence Intervals for Exceedance Probability |
| excel.link | Convenient Data Exchange with Microsoft Excel |
| excel2eprime | Split Sentences by Factors |
| exceldata | Streamline Data Import, Cleaning and Recoding from 'Excel' |
| ExcelFunctionsR | Imports Excel Functions to R |
| excelR | A Wrapper of the 'JavaScript' Library 'jExcel' |
| ExcessMass | Excess Mass Calculation and Plots |
| excessmort | Excess Mortality |
| excluder | Checks for Exclusion Criteria in Online Data |
| ExclusionTable | Creating Tables of Excluded Observations |
| exCon | Interactive Exploration of Contour Data |
| excursions | Excursion Sets and Contour Credibility Regions for Random Fields |
| exdex | Estimation of the Extremal Index |
| exdqlm | Extended Dynamic Quantile Linear Models |
| executablePackeR | Make 'shiny' App to Executable Program |
| ExGaussEstim | Quantile Maximization Likelihood Estimation and Bayesian Ex-Gaussian Estimation |
| ExhaustiveSearch | A Fast and Scalable Exhaustive Feature Selection Framework |
| exif | Read EXIF Metadata from JPEGs |
| exifr | EXIF Image Data in R |
| exiftoolr | ExifTool Functionality from R |
| ExNRuleEnsemble | A k Nearest Neibour Ensemble Based on Extended Neighbourhood Rule |
| ExpAnalysis3d | Pacote Para Analise De Experimentos Com Graficos De Superficie Resposta |
| ExPanDaR | Explore Your Data Interactively |
| expandFunctions | Feature Matrix Builder |
| EXPAR | Fitting of Exponential Autoregressive (EXPAR) Model |
| EXPARMA | Fitting of Exponential Autoregressive Moving Average (EXPARMA) Model |
| expDB | Database for Experiment Dataset |
| ExpDE | Modular Differential Evolution for Experimenting with Operators |
| ExpDes | Experimental Designs Package |
| ExpDes.pt | Pacote Experimental Designs (Portugues) |
| expectreg | Expectile and Quantile Regression |
| experDesign | Design Experiments for Batches |
| experiences | Experience Research |
| experiment | R Package for Designing and Analyzing Randomized Experiments |
| experimentr | Datasets Used in Social Science Experiments: A Hands-on Introduction |
| ExpertChoice | Design of Discrete Choice and Conjoint Analysis |
| ExpGenetic | Non-Additive Expression Analysis of Hybrid Offspring |
| ExpImage | Analysis of Images in Experiments |
| expint | Exponential Integral and Incomplete Gamma Function |
| expirest | Expiry Estimation Procedures |
| explainer | Machine Learning Model Explainer |
| ExplainPrediction | Explanation of Predictions for Classification and Regression Models |
| ExplodeLayout | Calculate Exploded Coordinates Based on Original Node Coordinates and Node Clustering Membership |
| explor | Interactive Interfaces for Results Exploration |
| exploratory | A Tool for Large-Scale Exploratory Analyses |
| explore | Simplifies Exploratory Data Analysis |
| exploreR | Tools for Quickly Exploring Data |
| expm | Matrix Exponential, Log, 'etc' |
| export | Streamlined Export of Graphs and Data Tables |
| ExPosition | Exploratory Analysis with the Singular Value Decomposition |
| ExposR | Models Topographic Exposure to Hurricane Winds |
| expowo | Data Mining of Plant Diversity and Distribution |
| expperm | Computing Expectations and Marginal Likelihoods for Permutations |
| ExpRep | Experiment Repetitions |
| expSBM | An Exponential Stochastic Block Model for Interaction Lengths |
| expsmooth | Data Sets from "Forecasting with Exponential Smoothing" |
| expss | Tables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics |
| expstudy | Tools for Actuarial Experience Studies |
| exreport | Fast, Reliable and Elegant Reproducible Research |
| EXRQ | Extreme Regression of Quantiles |
| extBatchMarking | Extended Batch Marking Models |
| ExtDist | Extending the Range of Functions for Probability Distributions |
| extendedFamily | Additional Families for Generalized Linear Models |
| exteriorMatch | Constructs the Exterior Match from Two Matched Control Groups |
| extlasso | Maximum Penalized Likelihood Estimation with Extended Lasso Penalty |
| ExtMallows | An Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation |
| ExtractTrainData | Extract Values from Raster |
| extraDistr | Additional Univariate and Multivariate Distributions |
| extrafont | Tools for Using Fonts |
| extrafontdb | Package for holding the database for the extrafont package |
| extrafrail | Estimation and Additional Tools for Alternative Shared Frailty Models |
| extraoperators | Extra Binary Relational and Logical Operators |
| extras | Helper Functions for Bayesian Analyses |
| extrasteps | More Miscellaneous Steps for the 'recipes' Package |
| extraterrestrial | Astrobiology Equations Estimating Extraterrestrial Life |
| extRatum | Summary Statistics for Geospatial Features |
| extRC | Extended RC Models for Contingency Tables |
| ExtremalDep | Extremal Dependence Models |
| ExtremeBounds | Extreme Bounds Analysis (EBA) |
| extremefit | Estimation of Extreme Conditional Quantiles and Probabilities |
| extremeIndex | Forecast Verification for Extreme Events |
| extrememix | Bayesian Estimation of Extreme Value Mixture Models |
| ExtremeRisks | Extreme Risk Measures |
| extRemes | Extreme Value Analysis |
| extremeStat | Extreme Value Statistics and Quantile Estimation |
| extremevalues | Univariate Outlier Detection |
| extremis | Statistics of Extremes |
| extremogram | Estimation of Extreme Value Dependence for Time Series Data |
| ExtrPatt | Spatial Dependencies and Indices for Extremes |
| exuber | Econometric Analysis of Explosive Time Series |
| exvatools | Value Added in Exports and Other Input-Output Table Analysis Tools |
| eye | Analysis of Eye Data |
| eyedata | Open Source Ophthalmic Data Sets Curated for R |
| eyelinker | Import ASC Files from EyeLink Eye Trackers |
| eyelinkReader | Import Gaze Data for EyeLink Eye Tracker |
| eyeRead | Prepare/Analyse Eye Tracking Data for Reading |
| eyetools | Analyse Eye Data |
| eyetrackingR | Eye-Tracking Data Analysis |
| eyeTrackR | Organising and Analysing Eye-Tracking Data |
| ez | Easy Analysis and Visualization of Factorial Experiments |
| ez.combat | Easy ComBat Harmonization |
| ezcox | Easily Process a Batch of Cox Models |
| ezCutoffs | Fit Measure Cutoffs in SEM |
| ezec | Easy Interface to Effective Concentration Calculations |
| ezECM | Event Categorization Matrix Classification for Nuclear Detonations |
| ezEDA | Task Oriented Interface for Exploratory Data Analysis |
| EzGP | Easy-to-Interpret Gaussian Process Models for Computer Experiments |
| ezknitr | Avoid the Typical Working Directory Pain When Using 'knitr' |
| ezmmek | Easy Michaelis-Menten Enzyme Kinetics |
| ezplot | Functions for Common Chart Types |
| ezr | Easy Use of R via Shiny App for Basic Analyses of Experimental Data |
| EZtune | Tunes AdaBoost, Elastic Net, Support Vector Machines, and Gradient Boosting Machines |
| f1dataR | Access Formula 1 Data |
| FaaSr | FaaS (Function as a Service) Package |
| fabCI | FAB Confidence Intervals |
| FABInference | FAB p-Values and Confidence Intervals |
| fabisearch | Change Point Detection in High-Dimensional Time Series Networks |
| fable | Forecasting Models for Tidy Time Series |
| fable.ata | 'ATAforecasting' Modelling Interface for 'fable' Framework |
| fable.prophet | Prophet Modelling Interface for 'fable' |
| fableCount | INGARCH and GLARMA Models for Count Time Series in Fable Framework |
| fabletools | Core Tools for Packages in the 'fable' Framework |
| fabMix | Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components |
| fabPrediction | Compute FAB (Frequentist and Bayes) Conformal Prediction Intervals |
| fabR | Wrapper Functions Collection Used in Data Pipelines |
| fabricatr | Imagine Your Data Before You Collect It |
| fabricerin | Create Easily Canvas in 'shiny' and 'RMarkdown' Documents |
| face | Fast Covariance Estimation for Sparse Functional Data |
| facebookadsR | Access to Facebook Ads via the 'Windsor.ai' API |
| facebookleadsR | Get Facebook Leads Ads Data via the 'Windsor.ai' API |
| facebookorganicR | Get Data from 'Facebook Organic' via the 'Windsor.ai' API |
| facerec | An Interface for Face Recognition |
| facmodCS | Cross-Section Factor Models |
| facmodTS | Time Series Factor Models for Asset Returns |
| FACT | Feature Attributions for ClusTering |
| factiv | Instrumental Variables Estimation for 2^k Factorial Experiments |
| FACTMLE | Maximum Likelihood Factor Analysis |
| FactoClass | Combination of Factorial Methods and Cluster Analysis |
| factoextra | Extract and Visualize the Results of Multivariate Data Analyses |
| FactoInvestigate | Automatic Description of Factorial Analysis |
| FactoMineR | Multivariate Exploratory Data Analysis and Data Mining |
| factoptd | Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments |
| factor.switching | Post-Processing MCMC Outputs of Bayesian Factor Analytic Models |
| factor256 | Use Raw Vectors to Minimize Memory Consumption of Factors |
| FactorAssumptions | Set of Assumptions for Factor and Principal Component Analysis |
| FactorCopula | Factor, Bi-Factor, Second-Order and Factor Tree Copula Models |
| factorial2x2 | Design and Analysis of a 2x2 Factorial Trial |
| factormodel | Factor Model Estimation Using Proxy Variables |
| factorplot | Presenting Pairwise Comparisons |
| factorstochvol | Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models |
| factory | Build Function Factories |
| Factoshiny | Perform Factorial Analysis from 'FactoMineR' with a Shiny Application |
| factReg | Multi-Environment Genomic Prediction with Penalized Factorial Regression |
| factset.analyticsapi.engines | 'FactSet' Engines API Client |
| factset.protobuf.stach.v2 | 'FactSet' 'STACH V2' Library |
| factset.protobuf.stachextensions | 'FactSet' 'STACH' Extensions Package |
| fad | Factor Analysis for Data |
| FADA | Variable Selection for Supervised Classification in High Dimension |
| FAdist | Distributions that are Sometimes Used in Hydrology |
| FADPclust | Functional Data Clustering Using Adaptive Density Peak Detection |
| faersquarterlydata | FDA Adverse Event Reporting System Quarterly Data Extracting Tool |
| FAfA | Factor Analysis for All |
| Fahrmeir | Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz |
| fail | File Abstraction Interface Layer (FAIL) |
| fairadapt | Fair Data Adaptation with Quantile Preservation |
| FAIRmaterials | Ontology Tools with Data FAIRification in Development |
| FairMclus | Clustering for Data with Sensitive Attribute |
| fairml | Fair Models in Machine Learning |
| fairmodels | Flexible Tool for Bias Detection, Visualization, and Mitigation |
| fairness | Algorithmic Fairness Metrics |
| fairsubset | Choose Representative Subsets |
| fake | Flexible Data Simulation Using the Multivariate Normal Distribution |
| fakemake | Mock the Unix Make Utility |
| fakir | Generate Fake Datasets for Prototyping and Teaching |
| fakmct | Fuzzy Adaptive Resonance Theory K-Means Clustering Technique |
| falcon | Finding Allele-Specific Copy Number in Next-Generation Sequencing Data |
| falconx | Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data |
| fam.recrisk | Familial Recurrence Risk |
| FAMetA | Fatty Acid Metabolic Analysis |
| FamEvent | Family Age-at-Onset Data Simulation and Penetrance Estimation |
| familial | Statistical Tests of Familial Hypotheses |
| familiar | End-to-End Automated Machine Learning and Model Evaluation |
| Familias | Probabilities for Pedigrees Given DNA Data |
| Families | Kinship Ties in (Virtual) Multi-Generation Populations |
| FamilyRank | Algorithm for Ranking Predictors Using Graphical Domain Knowledge |
| FAmle | Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions |
| FAMoS | A Flexible Algorithm for Model Selection |
| famSKATRC | Family Sequence Kernel Association Test for Rare and Common Variants |
| FAMT | Factor Analysis for Multiple Testing (FAMT) : Simultaneous Tests under Dependence in High-Dimensional Data |
| fanc | Penalized Likelihood Factor Analysis via Nonconvex Penalty |
| fANCOVA | Nonparametric Analysis of Covariance |
| fancycut | A Fancy Version of 'base::cut' |
| fangs | Feature Allocation Neighborhood Greedy Search Algorithm |
| fanovaGraph | Building Kriging Models from FANOVA Graphs |
| fanplot | Visualisation of Sequential Probability Distributions Using Fan Charts |
| fansi | ANSI Control Sequence Aware String Functions |
| fanyi | Translate Words or Sentences via Online Translators |
| FAO56 | Evapotranspiration Based on FAO Penman-Monteith Equation |
| FAOSTAT | Download Data from the FAOSTAT Database |
| faoutlier | Influential Case Detection Methods for Factor Analysis and Structural Equation Models |
| faq | Create FAQ Page |
| far | Modelization for Functional AutoRegressive Processes |
| faraway | Functions and Datasets for Books by Julian Faraway |
| FARDEEP | Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares |
| farff | A Faster 'ARFF' File Reader and Writer |
| FarmSelect | Factor Adjusted Robust Model Selection |
| FarmTest | Factor-Adjusted Robust Multiple Testing |
| farr | Data and Code for Financial Accounting Research |
| farrell | Interactive Interface to Data Envelopment Analysis Modeling |
| farver | High Performance Colour Space Manipulation |
| FAS | Factor-Augmented Sparse Regression Tuning-Free Testing |
| fasano.franceschini.test | Fasano-Franceschini Test: A Multivariate Kolmogorov-Smirnov Two-Sample Test |
| fase | Functional Adjacency Spectral Embedding |
| FASeg | Joint Segmentation of Correlated Time Series |
| fasjem | A Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models |
| fAssets | Rmetrics - Analysing and Modelling Financial Assets |
| fasstr | Analyze, Summarize, and Visualize Daily Streamflow Data |
| FAST.R | Analyze and Visualize FAST-Generated Data |
| fasta | Fast Adaptive Shrinkage/Thresholding Algorithm |
| fastadi | Self-Tuning Data Adaptive Matrix Imputation |
| fastAFT | Fast Regression for the Accelerated Failure Time (AFT) Model |
| fastai | Interface to 'fastai' |
| fastbackward | Fast Backward Elimination Based on Information Criterion |
| FastBandChol | Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor |
| fastbeta | Fast Approximation of Time-Varying Infectious Disease Transmission Rates |
| fastcluster | Fast Hierarchical Clustering Routines for R and 'Python' |
| fastcmh | Significant Interval Discovery with Categorical Covariates |
| fastcmprsk | Fine-Gray Regression via Forward-Backward Scan |
| fastcox | Lasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm |
| fastcpd | Fast Change Point Detection via Sequential Gradient Descent |
| FastCUB | Fast Estimation of CUB Models via Louis' Identity |
| fastdid | Fast Staggered Difference-in-Difference Estimators |
| fastDummies | Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables |
| fasterElasticNet | An Amazing Fast Way to Fit Elastic Net |
| fasterize | Fast Polygon to Raster Conversion |
| fastFMM | Fast Functional Mixed Models using Fast Univariate Inference |
| FastGaSP | Fast and Exact Computation of Gaussian Stochastic Process |
| fastGHQuad | Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature |
| fastGLCM | 'GLCM' Texture Features |
| fastglm | Fast and Stable Fitting of Generalized Linear Models using 'RcppEigen' |
| fastglmpca | Fast Algorithms for Generalized Principal Component Analysis |
| FastGP | Efficiently Using Gaussian Processes with Rcpp and RcppEigen |
| fastGraph | Fast Drawing and Shading of Graphs of Statistical Distributions |
| fastICA | FastICA Algorithms to Perform ICA and Projection Pursuit |
| FastImputation | Learn from Training Data then Quickly Fill in Missing Data |
| FastJM | Semi-Parametric Joint Modeling of Longitudinal and Survival Data |
| fastJT | Efficient Jonckheere-Terpstra Test Statistics |
| FastKM | A Fast Multiple-Kernel Method Based on a Low-Rank Approximation |
| fastkmedoids | Faster K-Medoids Clustering Algorithms: FastPAM, FastCLARA, FastCLARANS |
| FastKNN | Fast k-Nearest Neighbors |
| fastkqr | A Fast Algorithm for Kernel Quantile Regression |
| fastLink | Fast Probabilistic Record Linkage with Missing Data |
| fastliu | Fast Functions for Liu Regression with Regularization Parameter and Statistics |
| fastLogisticRegressionWrap | Fast Logistic Regression Wrapper |
| fastlogitME | Basic Marginal Effects for Logit Models |
| fastM | Fast Computation of Multivariate M-Estimators |
| fastmap | Fast Data Structures |
| fastmatch | Fast 'match()' Function |
| fastmatrix | Fast Computation of some Matrices Useful in Statistics |
| fastmit | Fast Mutual Information Based Independence Test |
| fastml | Fast Machine Learning Model Training and Evaluation |
| fastNaiveBayes | Extremely Fast Implementation of a Naive Bayes Classifier |
| fastnet | Large-Scale Social Network Analysis |
| fastOnlineCpt | Online Multivariate Changepoint Detection |
| FastPCS | FastPCS Robust Fit of Multivariate Location and Scatter |
| fastplyr | Fast Alternatives to 'tidyverse' Functions |
| fastpng | Read and Write PNG Files with Configurable Decoder/Encoder Options |
| fastpos | Finds the Critical Sequential Point of Stability for a Pearson Correlation |
| fastqcr | Quality Control of Sequencing Data |
| fastqq | Faster Generation of Quantile Quantile Plots with Large Samples |
| fastR2 | Foundations and Applications of Statistics Using R (2nd Edition) |
| FastRCS | Fits the FastRCS Robust Multivariable Linear Regression Model |
| fastrep | Time-Saving Package for Creating Reports |
| fastRG | Sample Generalized Random Dot Product Graphs in Linear Time |
| fastRhockey | Functions to Access Premier Hockey Federation and National Hockey League Play by Play Data |
| fastrmodels | Models for the 'nflfastR' Package |
| FastRWeb | Fast Interactive Framework for Web Scripting Using R |
| FastSF | Fast Structural Filtering |
| fastshap | Fast Approximate Shapley Values |
| fastSOM | Fast Calculation of Spillover Measures |
| FastStepGraph | A Fast Algorithm for Sparse Precision Matrix Estimation |
| fastText | Efficient Learning of Word Representations and Sentence Classification |
| fastTextR | An Interface to the 'fastText' Library |
| fasttime | Fast Utility Function for Time Parsing and Conversion |
| fastTopics | Fast Algorithms for Fitting Topic Models and Non-Negative Matrix Factorizations to Count Data |
| fastTS | Fast Time Series Modeling for Seasonal Series with Exogenous Variables |
| FastUtils | Fast, Readable Utility Functions |
| fastverse | A Suite of High-Performance Packages for Statistics and Data Manipulation |
| fastWavelets | Compute Maximal Overlap Discrete Wavelet Transform (MODWT) and À Trous Discrete Wavelet Transform |
| fat2Lpoly | Two-Locus Family-Based Association Test with Polytomous Outcome |
| FateID | Quantification of Fate Bias in Multipotent Progenitors |
| FatTailsR | Kiener Distributions and Fat Tails in Finance |
| FaultTree | Fault Trees for Risk and Reliability Analysis |
| fauxnaif | Convert Values to NA |
| fauxpas | HTTP Error Helpers |
| FAVAR | Bayesian Analysis of a FAVAR Model |
| favawesome | 'Font Awesome' Icons as 'shiny' 'favicons' |
| faviconPlease | Find the URL to the 'Favicon' for a Website |
| favnums | A Dataset of Favourite Numbers |
| FAwR | Functions and Datasets for "Forest Analytics with R" |
| fbar | An Extensible Approach to Flux Balance Analysis |
| fBasics | Rmetrics - Markets and Basic Statistics |
| fbati | Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families |
| FBCRM | Phase I Optimal Dose Assignment using the FBCRM and MFBCRM Methods |
| FBFsearch | Algorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors |
| fbglm | Fractional Binomial Regression Model |
| FBMS | Flexible Bayesian Model Selection and Model Averaging |
| FBN | FISH Based Normalization and Copy Number Inference of SNP Microarray Data |
| fbnet | Forensic Bayesian Networks |
| fBonds | Rmetrics - Pricing and Evaluating Bonds |
| fbRads | Analyzing and Managing Facebook Ads from R |
| fbroc | Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves |
| fbst | The Full Bayesian Evidence Test, Full Bayesian Significance Test and the e-Value |
| fc | Standard Evaluation-Based Multivariate Function Composition |
| fca | Floating Catchment Area (FCA) Methods to Calculate Spatial Accessibility |
| fcaR | Formal Concept Analysis |
| fcci | Feldman-Cousins Confidence Intervals |
| fcfdr | Flexible cFDR |
| fcirt | Forced Choice in Item Response Theory |
| fcl | A Financial Calculator |
| fclust | Fuzzy Clustering |
| fcm | Inference of Fuzzy Cognitive Maps (FCMs) |
| FCMapper | Fuzzy Cognitive Mapping |
| FCO | Flexible Cutoffs for Model Fit Evaluation in Covariance-Based Structural Models |
| fCopulae | Rmetrics - Bivariate Dependence Structures with Copulae |
| fcp | Function Composition |
| FCPS | Fundamental Clustering Problems Suite |
| fcr | Functional Concurrent Regression for Sparse Data |
| fcros | A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations |
| fctbases | Functional Bases |
| fctutils | Advanced Factor Manipulation Utilities |
| fcuk | The Ultimate Helper for Clumsy Fingers |
| FCVAR | Estimation and Inference for the Fractionally Cointegrated VAR |
| FD | Measuring Functional Diversity (FD) from Multiple Traits, and Other Tools for Functional Ecology |
| fda | Functional Data Analysis |
| fda.usc | Functional Data Analysis and Utilities for Statistical Computing |
| fdaACF | Autocorrelation Function for Functional Time Series |
| fdacluster | Joint Clustering and Alignment of Functional Data |
| fdaconcur | Concurrent Regression and History Index Models for Functional Data |
| fdadensity | Functional Data Analysis for Density Functions by Transformation to a Hilbert Space |
| fdaMixed | Functional Data Analysis in a Mixed Model Framework |
| fdaMocca | Model-Based Clustering for Functional Data with Covariates |
| fdANOVA | Analysis of Variance for Univariate and Multivariate Functional Data |
| fdaoutlier | Outlier Detection Tools for Functional Data Analysis |
| fdapace | Functional Data Analysis and Empirical Dynamics |
| fdapaceShiny | A Shiny App for the 'fdapace' Package |
| fdaPDE | Physics-Informed Spatial and Functional Data Analysis |
| fdaPOIFD | Partially Observed Integrated Functional Depth |
| fdarep | Two-Dimensional FPCA, Marginal FPCA, and Product FPCA for Repeated Functional Data |
| fdaSP | Sparse Functional Data Analysis Methods |
| fdasrvf | Elastic Functional Data Analysis |
| fdatest | Interval Testing Procedure for Functional Data |
| FDboost | Boosting Functional Regression Models |
| fddm | Fast Implementation of the Diffusion Decision Model |
| fdesigns | Optimal Experimental Designs for Functional/Dynamic Models |
| fdicdata | Accessing FDIC Bank Data |
| fdm2id | Data Mining and R Programming for Beginners |
| fDMA | Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes |
| fdq | Forest Data Quality |
| fdrci | Permutation-Based FDR Point and Confidence Interval Estimation |
| fdrDiscreteNull | False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions |
| FDRestimation | Estimate, Plot, and Summarize False Discovery Rates |
| FDRsamplesize2 | Computing Power and Sample Size for the False Discovery Rate in Multiple Applications |
| FDRsampsize | Compute Sample Size that Meets Requirements for Average Power and FDR |
| fdrtool | Estimation of (Local) False Discovery Rates and Higher Criticism |
| fds | Functional Data Sets |
| fdth | Frequency Distribution Tables, Histograms and Polygons |
| fdWasserstein | Application of Optimal Transport to Functional Data Analysis |
| FDX | False Discovery Exceedance Controlling Multiple Testing Procedures |
| FEA | Finite Element Modeling for R |
| FeaLect | Scores Features for Feature Selection |
| feasts | Feature Extraction and Statistics for Time Series |
| feather | R Bindings to the Feather 'API' |
| feature | Local Inferential Feature Significance for Multivariate Kernel Density Estimation |
| featureCorMatrix | Measurement Level Independent Feature Correlation Matrix |
| FeatureExtraction | Generating Features for a Cohort |
| featurefinder | Feature Finder |
| featureflag | Turn Features On and Off using Feature Flags |
| FeatureHashing | Creates a Model Matrix via Feature Hashing with a Formula Interface |
| FeatureImpCluster | Feature Importance for Partitional Clustering |
| features | Feature Extraction for Discretely-Sampled Functional Data |
| FeatureTerminatoR | Feature Selection Engine to Remove Features with Minimal Predictive Power |
| featurizer | Some Helper Functions that Help Create Features from Data |
| fec16 | Data Package for the 2016 United States Federal Elections |
| fechner | Fechnerian Scaling of Discrete Object Sets |
| fect | Fixed Effects Counterfactuals |
| FedData | Download Geospatial Data Available from Several Federated Data Sources |
| federalregister | Client Package for the U.S. Federal Register API |
| FedIRT | Federated Item Response Theory Models |
| fedmatch | Fast, Flexible, and User-Friendly Record Linkage Methods |
| fedregs | Text Analysis of the US Code of Federal Regulations |
| fedstatAPIr | Unofficial API for Fedstat (Rosstat EMISS System) for Automatic and Efficient Data Queries |
| fedz1 | An Easier Access to Financial Accounts of the United States(Z.1) |
| FeedbackTS | Analysis of Feedback in Time Series |
| feisr | Estimating Fixed Effects Individual Slope Models |
| felp | Functional Help for Functions, Objects, and Packages |
| feltr | Access the Felt API |
| fence | Using Fence Methods for Model Selection |
| FENmlm | Fixed Effects Nonlinear Maximum Likelihood Models |
| FEprovideR | Fixed Effects Logistic Model with High-Dimensional Parameters |
| FER | Financial Engineering in R |
| fergm | Estimation and Fit Assessment of Frailty Exponential Random Graph Models |
| fermicatsR | Fermi Large Area Telescope Catalogs |
| ferrn | Facilitate Exploration of touRR optimisatioN |
| FertBoot | Fertilizer Response Curve Analysis by Bootstrapping Residuals |
| fertilmodel | Fertility Models |
| FertNet | Process Data from the Social Networks and Fertility Survey |
| FESta | Fishing Effort Standardisation |
| fetch | Fetch Data from Various Data Sources |
| fetchGoogleAnalyticsR | Get Data from Google Analytics via the 'Windsor.ai' API |
| fetchSalesforceR | Get Data from Salesforce via the 'Windsor.ai' API |
| fExtremes | Rmetrics - Modelling Extreme Events in Finance |
| ff | Memory-Efficient Storage of Large Data on Disk and Fast Access Functions |
| FFD | Freedom from Disease |
| FFdownload | Download Data from Kenneth French's Website |
| ffmanova | Fifty-Fifty MANOVA |
| ffp | Fully Flexible Probabilities for Stress Testing and Portfolio Construction |
| ffscrapr | API Client for Fantasy Football League Platforms |
| FFTrees | Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees |
| fftw | Fast FFT and DCT Based on the FFTW Library |
| fftwtools | Wrapper for 'FFTW3' Includes: One-Dimensional, Two-Dimensional, Three-Dimensional, and Multivariate Transforms |
| FGalgorithm | Flury and Gautschi algorithms |
| fGarch | Rmetrics - Autoregressive Conditional Heteroskedastic Modelling |
| fgdr | Utilities for Fundamental Geo-Spatial Data |
| fgeo | Analyze Forest Diversity and Dynamics |
| fgeo.analyze | Analyze ForestGEO Data |
| fgeo.plot | Plot ForestGEO Data |
| fgeo.tool | Import and Manipulate 'ForestGEO' Data |
| fgeo.x | Access Small ForestGEO Datasets For Examples |
| fgitR | Using 'FastGit' to Accelerate the Access to 'GitHub' |
| FGLMtrunc | Truncated Functional Generalized Linear Models |
| fglsnet | A Feasible Generalized Least Squares Estimator for Regression Analysis of Outcomes with Network Dependence |
| fgm | Partial Separability and Functional Gaussian Graphical Models |
| Fgmutils | Forest Growth Model Utilities |
| FGRepo | Functional Genomics Repository for POST-GWAS Analysis |
| fgui | Function GUI |
| FHDI | Fractional Hot Deck and Fully Efficient Fractional Imputation |
| fhircrackr | Handling HL7 FHIR® Resources in R |
| fHMM | Fitting Hidden Markov Models to Financial Data |
| FHtest | Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class |
| FI | Provide functions for forest inventory calculations |
| fiberLD | Fiber Length Determination |
| fic | Focused Information Criteria for Model Comparison |
| fICA | Classical, Reloaded and Adaptive FastICA Algorithms |
| fidelius | Browser-Side Password-Protected HTML Documents |
| fido | Bayesian Multinomial Logistic Normal Regression |
| FielDHub | A Shiny App for Design of Experiments in Life Sciences |
| fields | Tools for Spatial Data |
| FieldSimR | Simulation of Plot Errors and Phenotypes in Plant Breeding Field Trials |
| fiery | A Lightweight and Flexible Web Framework |
| FIESTA | Forest Inventory Estimation and Analysis |
| FIESTAutils | Utility Functions for Forest Inventory Estimation and Analysis |
| fig | A Config Package with No "Con" |
| figir | Check Validity of FIGI, CUSIP, ISIN, SEDOL |
| figma | Web Client/Wrapper to the 'Figma API' |
| figpatch | Easily Arrange External Figures with Patchwork Alongside 'ggplot2' Figures |
| figuRes2 | Support for a Variety of Figure Production Tasks |
| file2meco | Transform Files to 'microtable' Object with 'microeco' Package |
| filearray | File-Backed Array for Out-of-Memory Computation |
| filebin | Wrapper for the Filebin File Sharing API |
| filecacher | File Cacher |
| filehash | Simple Key-Value Database |
| filehashSQLite | Simple Key-Value Database using SQLite |
| filelock | Portable File Locking |
| filematrix | File-Backed Matrix Class with Convenient Read and Write Access |
| filenamer | Easy Management of File Names |
| files | Effective File Navigation from the R Console |
| filesstrings | Handy File and String Manipulation |
| FILEST | Fine-Level Structure Simulator |
| filling | Matrix Completion, Imputation, and Inpainting Methods |
| fillpattern | Patterned Fills for 'ggplot2' and 'grid' Graphics |
| fillr | Fill Missing Values in Vectors |
| FilmsGmooG | IMDb Film Ratings from the Summer of 2022 |
| filterNHP | Non-Human Primate Search Filters |
| filters | A "Snake_case" Filter System for R |
| fImport | Rmetrics - Importing Economic and Financial Data |
| finalfit | Quickly Create Elegant Regression Results Tables and Plots when Modelling |
| finalsize | Calculate the Final Size of an Epidemic |
| FinAna | Financial Analysis and Regression Diagnostic Analysis |
| FinancialInstrument | Financial Instrument Model Infrastructure and Meta-Data |
| FinancialMath | Financial Mathematics for Actuaries |
| finbif | Interface for the 'Finnish Biodiversity Information Facility' API |
| finbipartite | Learning Bipartite Graphs: Heavy Tails and Multiple Components |
| FinCal | Time Value of Money, Time Series Analysis and Computational Finance |
| finch | Parse Darwin Core Files |
| FinCovRegularization | Covariance Matrix Estimation and Regularization for Finance |
| findGSEP | Estimate Genome Size of Polyploid Species Using k-Mer Frequencies |
| findInFiles | Find Pattern in Files |
| findInGit | Find Pattern in Files of All Branches of a 'git' Repository |
| FindIt | Finding Heterogeneous Treatment Effects |
| findPackage | Find 'CRAN' Package by Topic |
| findpython | Functions to Find an Acceptable Python Binary |
| findR | Find Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching |
| findSVI | Calculate Social Vulnerability Index for Communities |
| findviews | A View Generator for Multidimensional Data |
| FinePop | Fine-Scale Population Analysis |
| FinePop2 | Fine-Scale Population Analysis (Rewrite for Gene-Trait-Environment Interaction Analysis) |
| finetune | Additional Functions for Model Tuning |
| fingerprint | Functions to Operate on Binary Fingerprint Data |
| fingerPro | Sediment Source Fingerprinting |
| fingraph | Learning Graphs for Financial Markets |
| finiteruinprob | Computation of the Probability of Ruin Within a Finite Time Horizon |
| finity | Test for Finiteness of Moments in a Distribution |
| FinNet | Quickly Build and Manipulate Financial Networks |
| finnishgrid | 'Fingrid Open Data API' R Client |
| finnsurveytext | Analyse Open-Ended Survey Responses in Finnish |
| finnts | Microsoft Finance Time Series Forecasting Framework |
| finreportr | Financial Data from U.S. Securities and Exchange Commission |
| FinTS | Companion to Tsay (2005) Analysis of Financial Time Series |
| fio | Friendly Input-Output Analysis |
| fipio | Lightweight Federal Information Processing System (FIPS) Code Information Retrieval |
| fipp | Induced Priors in Bayesian Mixture Models |
| FiRE | Finder of Rare Entities (FiRE) |
| firebase | Integrates 'Google Firebase' Authentication Storage, and 'Analytics' with 'Shiny' |
| firebehavioR | Prediction of Wildland Fire Behavior and Hazard |
| first | Factor Importance Ranking and Selection using Total Indices |
| FiSh | Fisher-Shannon Method |
| fishbc | Fishes of British Columbia |
| fishdata | A Small Collection of Fish Population Datasets |
| FisherEM | The FisherEM Algorithm to Simultaneously Cluster and Visualize High-Dimensional Data |
| fisheye | Transform Base Maps Using Log-Azimuthal Projection |
| fishkirkko2015 | Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland |
| fishmethods | Fishery Science Methods and Models |
| fishMod | Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models |
| FishPhyloMaker | Phylogenies for a List of Finned-Ray Fishes |
| FishProxCompAnalyzer | Proximate Composition Analysis of Fish and Feed Ingredients |
| FishResp | Analytical Tool for Aquatic Respirometry |
| fishRman | The Fisheries Scientist's Toolbox |
| fishtree | Interface to the Fish Tree of Life API |
| fishualize | Color Palettes Based on Fish Species |
| FisPro | Fuzzy Inference System Design and Optimization |
| FIT | Transcriptomic Dynamics Models in Field Conditions |
| fit.models | Compare Fitted Models |
| fitbitr | Interface with the 'Fitbit' API |
| fitbitScraper | Scrapes Data from Fitbit |
| fitbitViz | 'Fitbit' Visualizations |
| fitConic | Fit Data to Any Conic Section |
| fitdistrplus | Help to Fit of a Parametric Distribution to Non-Censored or Censored Data |
| FitDynMix | Estimation of Dynamic Mixtures |
| fitHeavyTail | Mean and Covariance Matrix Estimation under Heavy Tails |
| fitlandr | Fit Vector Fields and Potential Landscapes from Intensive Longitudinal Data |
| fitmix | Finite Mixture Model Fitting of Lifespan Datasets |
| fitODBOD | Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD |
| fitODBODRshiny | 'Shiny' Application for R Package 'fitODBOD' |
| fitode | Tools for Ordinary Differential Equations Model Fitting |
| fitplc | Fit Hydraulic Vulnerability Curves |
| fitPoly | Genotype Calling for Bi-Allelic Marker Assays |
| fitPS | Fit Zeta Distributions to Forensic Data |
| fitscape | Classes for Fitness Landscapes and Seascapes |
| FITSio | FITS (Flexible Image Transport System) Utilities |
| fitteR | Fit Hundreds of Theoretical Distributions to Empirical Data |
| FitUltD | Fit Univariate Mixed and Usual Distributions |
| fitur | Fit Univariate Distributions |
| fitzRoy | Easily Scrape and Process AFL Data |
| fivethirtyeight | Data and Code Behind the Stories and Interactives at 'FiveThirtyEight' |
| FixedPoint | Algorithms for Finding Fixed Point Vectors of Functions |
| fixedpointproperty | Determine and Test the Fixed-Point Property in Binary Mixture Data |
| fixedTimeEvents | The Distribution of Distances Between Discrete Events in Fixed Time |
| fixerapi | An R Client for the "Fixer.io" Currency API |
| fixest | Fast Fixed-Effects Estimations |
| fixr | Fixing Data Made Easy for Statistical Analysis |
| FixSeqMTP | Fixed Sequence Multiple Testing Procedures |
| fixtuRes | Mock Data Generator |
| fizzbuzzR | Fizz Buzz Implementation |
| FjordLight | Available Light Within the Water Column and on the Seafloor of Arctic Fjords |
| FKF | Fast Kalman Filter |
| FKF.SP | Fast Kalman Filtering Through Sequential Processing |
| FKSUM | Fast Kernel Sums |
| flacco | Feature-Based Landscape Analysis of Continuous and Constrained Optimization Problems |
| flagr | Implementation of Flag Aggregation |
| flam | Fits Piecewise Constant Models with Data-Adaptive Knots |
| FLAME | Interpretable Matching for Causal Inference |
| flametree | Generate Random Tree-Like Images |
| flamingos | Functional Latent Data Models for Clustering Heterogeneous Curves ('FLaMingos') |
| flan | FLuctuation ANalysis on Mutation Models |
| flap | Forecast Linear Augmented Projection |
| flare | Family of Lasso Regression |
| flashCard | Create a Flash Card |
| flashClust | Implementation of optimal hierarchical clustering |
| flashier | Empirical Bayes Matrix Factorization |
| flashlight | Shed Light on Black Box Machine Learning Models |
| flashr | Create Flashcards of Terms and Definitions |
| flatr | Transforms Contingency Tables to Data Frames, and Analyses Them |
| flattabler | Obtaining a Flat Table from Pivot Tables |
| flatxml | Tools for Working with XML Files as R Dataframes |
| fledge | Smoother Change Tracking and Versioning for R Packages |
| flevr | Flexible, Ensemble-Based Variable Selection with Potentially Missing Data |
| flexclust | Flexible Cluster Algorithms |
| flexCWM | Flexible Cluster-Weighted Modeling |
| flexdashboard | R Markdown Format for Flexible Dashboards |
| FlexDir | Tools to Work with the Flexible Dirichlet Distribution |
| FlexGAM | Generalized Additive Models with Flexible Response Functions |
| flexiblas | 'FlexiBLAS' API Interface |
| flexlsx | Exporting 'flextable' to 'xlsx' Files |
| flexmet | Flexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model |
| flexmix | Flexible Mixture Modeling |
| flexmixNL | Finite Mixture Modeling of Generalized Nonlinear Models |
| flexmsm | A General Framework for Flexible Multi-State Survival Modelling |
| flexOR | Flexible Odds Ratio Curves |
| FlexParamCurve | Tools to Fit Flexible Parametric Curves |
| flexpolyline | Flexible Polyline Encoding |
| FlexReg | Regression Models for Bounded Continuous and Discrete Responses |
| flexrsurv | Flexible Relative Survival Analysis |
| FlexScan | Flexible Scan Statistics |
| flexsiteboard | Breaks Single Page Applications from 'flexdashboard' in Multiple Files |
| flexsurv | Flexible Parametric Survival and Multi-State Models |
| flexsurvcure | Flexible Parametric Cure Models |
| flextable | Functions for Tabular Reporting |
| FlexVarJM | Estimate Joint Models with Subject-Specific Variance |
| FlickrAPI | Access to Flickr API |
| flifo | Don't Get Stuck with Stacks in R |
| flightplot | Plotting Flight Paths on Maps |
| FLightR | Reconstruct Animal Paths from Solar Geolocation Loggers Data |
| flightsbr | Download Flight and Airport Data from Brazil |
| flimo | Fixed Landscape Inference Method |
| flintyR | Simple and Flexible Tests of Sample Exchangeability |
| flip | Multivariate Permutation Tests |
| flipbookr | Parses Code, Creates Partial Code Builds, Delivers Code Movie |
| flipdownr | Implement a Countdown in 'RMarkdown' Documents and 'shiny' Applications |
| flipdownWidgets | A Wrapper of JavaScript Library 'flipdown.js' |
| flippant | Dithionite Scramblase Assay Analysis |
| flipr | Flexible Inference via Permutations in R |
| flipscores | Robust Score Testing in GLMs, by Sign-Flip Contributions |
| float | 32-Bit Floats |
| flobr | Convert Files to and from Binary Objects (BLOBs) |
| flock | Process Synchronization Using File Locks |
| flocker | Flexible Occupancy Estimation with Stan |
| flood | Statistical Methods for the (Regional) Analysis of Flood Frequency |
| FloodFreqPlot | Flood Probability Plotting and Graphical Frequency Analysis |
| FLOPART | Functional Labeled Optimal Partitioning |
| flora | Tools for Interacting with the Brazilian Flora 2020 |
| florabr | Explore Flora e Funga do Brasil Database |
| FLORAL | Fit Log-Ratio Lasso Regression for Compositional Data |
| flourishcharts | 'Flourish' for 'R' and 'Python' |
| flow | View and Browse Code Using Flow Diagrams |
| flowchart | Tidy Flowchart Generator |
| FlowerMate | Reciprocity Indices for Style-Polymorphic Plants |
| flowmapblue | Flow Map Rendering |
| flowmapper | Draw Flows (Migration, Goods, Money, Information) on 'ggplot2' Plots |
| flowml | A Backend for a 'nextflow' Pipeline that Performs Machine-Learning-Based Modeling of Biomedical Data |
| FlowRegEnvCost | The Environmental Costs of Flow Regulation |
| FlowScreen | Daily Streamflow Trend and Change Point Screening |
| flowTraceR | Tracing Information Flow for Inter-Software Comparisons in Mass Spectrometry-Based Bottom-Up Proteomics |
| flps | Fully-Latent Principal Stratification |
| FLR | Fuzzy Logic Rule Classifier |
| flsa | Path Algorithm for the General Fused Lasso Signal Approximator |
| FLSSS | Mining Rigs for Problems in the Subset Sum Family |
| Fluidigm | Handling Fluidigm Data |
| fluidsynth | Read and Play Digital Music (MIDI) |
| FluMoDL | Influenza-Attributable Mortality with Distributed-Lag Models |
| fluoSurv | Estimate Insect Survival from Fluorescence Data |
| fluspect | Fluspect-B |
| flux | Flux Rate Calculation from Dynamic Closed Chamber Measurements |
| fluxfinder | Parsing, Computation, and Diagnostics for Greenhouse Gas Measurements |
| fluxible | Ecosystem Gas Fluxes Calculations for Closed Loop Chamber Setup |
| fluxweb | Estimate Energy Fluxes in Food Webs |
| flying | Simulation of Bird Flight Range |
| FlyingR | Simulation of Bird Flight Range |
| fma | Data Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998) |
| FMAdist | Frequentist Model Averaging Distribution |
| FMAT | The Fill-Mask Association Test |
| FMC | Factorial Experiments with Minimum Level Changes |
| FMCCSD | Efficient Estimation of Clustered Current Status Data |
| fmcmc | A friendly MCMC framework |
| fmdu | (Restricted) [external] Multidimensional Unfolding |
| FME | A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis |
| fmeffects | Model-Agnostic Interpretations with Forward Marginal Effects |
| fmerPack | Tools of Heterogeneity Pursuit via Finite Mixture Effects Model |
| fmesher | Triangle Meshes and Related Geometry Tools |
| fmf | Fast Class Noise Detector with Multi-Factor-Based Learning |
| FMM | Rhythmic Patterns Modeling by FMM Models |
| FMP | Filtered Monotonic Polynomial IRT Models |
| fmpcloudr | R Access to the 'FMP Cloud' and 'Financial Modeling Prep' API |
| FMradio | Factor Modeling for Radiomics Data |
| fmri | Analysis of fMRI Experiments |
| fmriqa | Functional MRI Quality Assurance Routines |
| fMRIscrub | Scrubbing and Other Data Cleaning Routines for fMRI |
| fMRItools | Routines for Common fMRI Processing Tasks |
| fmsb | Functions for Medical Statistics Book with some Demographic Data |
| FMsmsnReg | Regression Models with Finite Mixtures of Skew Heavy-Tailed Errors |
| FMStable | Finite Moment Stable Distributions |
| fmt | Variance Estimation of FMT Method (Fully Moderated T-Statistic) |
| fmtr | Easily Apply Formats to Data |
| fMultivar | Rmetrics - Modeling of Multivariate Financial Return Distributions |
| fmx | Finite Mixture Parametrization |
| fnets | Factor-Adjusted Network Estimation and Forecasting for High-Dimensional Time Series |
| FNN | Fast Nearest Neighbor Search Algorithms and Applications |
| fNonlinear | Rmetrics - Nonlinear and Chaotic Time Series Modelling |
| FnR | Inbreeding and Numerator Relationship Coefficients |
| fntl | Numerical Tools for 'Rcpp' and Lambda Functions |
| FOCI | Feature Ordering by Conditional Independence |
| focusedMDS | Focused, Interactive Multidimensional Scaling |
| foghorn | Summarize CRAN Check Results in the Terminal |
| folda | Forward Stepwise Discriminant Analysis with Pillai's Trace |
| folders | Standardized Folder Names |
| folio | Datasets for Teaching Archaeology and Paleontology |
| fomantic.plus | Add Extra 'Fomantic UI' Components to 'shiny.semantic' |
| fontawesome | Easily Work with 'Font Awesome' Icons |
| fontBitstreamVera | Fonts with 'Bitstream Vera Fonts' License |
| fontcm | Computer Modern font for use with extrafont package |
| fontLiberation | Liberation Fonts |
| fontquiver | Set of Installed Fonts |
| foodingraph | Food Network Inference and Visualization |
| foodquotient | Food Quotient and Nutrient Analysis for HSFFQ |
| foodwebWrapper | Enhanced Wrapper to Show Which Functions Call What |
| footballpenaltiesBL | Penalties in the German Men's Football Bundesliga |
| footBayes | Fitting Bayesian and MLE Football Models |
| footprint | Calculate Air Travel Emissions |
| foqat | Field Observation Quick Analysis Toolkit |
| ForagingOrg | Organization Measures for Visual Foraging |
| forams | Foraminifera and Community Ecology Analyses |
| forcats | Tools for Working with Categorical Variables (Factors) |
| forceplate | Processing Force-Plate Data |
| forceR | Force Measurement Analyses |
| foreach | Provides Foreach Looping Construct |
| ForeCA | Forecastable Component Analysis |
| forecast | Forecasting Functions for Time Series and Linear Models |
| ForecastComb | Forecast Combination Methods |
| ForecastCombinations | Forecast Combinations |
| forecasteR | Time Series Forecast System |
| forecastHybrid | Convenient Functions for Ensemble Time Series Forecasts |
| forecastLSW | Forecasting Routines for Locally Stationary Wavelet Processes |
| forecastML | Time Series Forecasting with Machine Learning Methods |
| forecastSNSTS | Forecasting for Stationary and Non-Stationary Time Series |
| ForecastTB | Test Bench for the Comparison of Forecast Methods |
| FoReco | Forecast Reconciliation |
| ForeComp | Size-Power Tradeoff Visualization for Equal Predictive Ability of Two Forecasts |
| forecTheta | Forecasting Time Series by Theta Models |
| foreign | Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ... |
| forensicolors | Forensic Colors |
| forensIT | Information Theory Tools for Forensic Analysis |
| foreSIGHT | Systems Insights from Generation of Hydroclimatic Timeseries |
| forestat | Forest Carbon Sequestration and Potential Productivity Calculation |
| forestControl | Approximate False Positive Rate Control in Selection Frequency for Random Forest |
| forestdata | Download Forestry Data |
| ForestDisc | Forest Discretization |
| forestdynR | Calculate Forest Dynamics |
| forestecology | Fitting and Assessing Neighborhood Models of the Effect of Interspecific Competition on the Growth of Trees |
| forested | Forest Attributes in Washington State |
| forestError | A Unified Framework for Random Forest Prediction Error Estimation |
| ForestFit | Statistical Modelling for Plant Size Distributions |
| ForestGapR | Tropical Forest Canopy Gaps Analysis |
| forestGYM | Forest Growth and Yield Model Based on Clutter Model |
| forestHES | Forest Health Evaluation System at the Forest Stand Level |
| forestinventory | Design-Based Global and Small-Area Estimations for Multiphase Forest Inventories |
| forestly | Interactive Forest Plot |
| forestmangr | Forest Mensuration and Management |
| forestmodel | Forest Plots from Regression Models |
| forestplot | Advanced Forest Plot Using 'grid' Graphics |
| forestploter | Create a Flexible Forest Plot |
| forestPSD | Forest Population Structure and Numeric Dynamics |
| forestr | Ecosystem and Canopy Structural Complexity Metrics from LiDAR |
| forestRK | Implements the Forest-R.K. Algorithm for Classification Problems |
| forestry | Reshape Data Tree |
| forestSAS | Forest Spatial Structure Analysis Systems |
| ForestTools | Tools for Analyzing Remote Sensing Forest Data |
| foretell | Projecting Customer Retention Based on Fader and Hardie Probability Models |
| forge | Casting Values into Shape |
| forImage | Foraminiferal Image Analysis and Test Measurement |
| ForIT | Functions to Estimate Tree Volume and Phytomass in the Italian Forest Inventory 2005 |
| formatBibtex | Format BibTeX Entries and Files |
| formatdown | Formatting Numbers in 'rmarkdown' Documents |
| formatR | Format R Code Automatically |
| formattable | Create 'Formattable' Data Structures |
| formatters | ASCII Formatting for Values and Tables |
| formods | 'Shiny' Modules for General Tasks |
| FormShare | A Simple Connection Between the 'FormShare App' and 'R' for Advanced Analytics |
| Formula | Extended Model Formulas |
| formula.tools | Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects |
| formulaic | Dynamic Generation and Quality Checks of Formula Objects |
| formulops | Mathematical Operations on R Formula |
| FormulR | Comprehensive Tools for Drug Formulation Analysis and Visualization |
| forplo | Flexible Forest Plots |
| forrel | Forensic Pedigree Analysis and Relatedness Inference |
| forsearch | Diagnostic Analysis Using Forward Search Procedure for Various Models |
| forstringr | String Manipulation Package for Those Familiar with 'Microsoft Excel' |
| FORTLS | Automatic Processing of Terrestrial-Based Technologies Point Cloud Data for Forestry Purposes |
| fortunes | R Fortunes |
| forward | Robust Analysis using Forward Search |
| forwards | Data from Surveys Conducted by Forwards |
| fossil | Palaeoecological and Palaeogeographical Analysis Tools |
| fossilbrush | Automated Cleaning of Fossil Occurrence Data |
| FossilSim | Simulation and Plots for Fossil and Taxonomy Data |
| FossilSimShiny | Shiny Application for 'FossilSim' |
| foto | Fourier Transform Textural Ordination |
| foundry | 'Palantir Foundry' Software Development Kit |
| FourgameteP | FourGamete Test |
| fourierin | Computes Numeric Fourier Integrals |
| fourPNO | Bayesian 4 Parameter Item Response Model |
| FourScores | A Game for Human vs. Human or Human vs. AI |
| FourWayHMM | Parsimonious Hidden Markov Models for Four-Way Data |
| fpa | Spatio-Temporal Fixation Pattern Analysis |
| fPASS | Power and Sample Size for Projection Test under Repeated Measures |
| fpc | Flexible Procedures for Clustering |
| FPCA3D | Three Dimensional Functional Component Analysis |
| fpcb | Predictive Confidence Bands for Functional Time Series Forecasting |
| FPCdpca | The FPCdpca Criterion on Distributed Principal Component Analysis |
| fpCompare | Reliable Comparison of Floating Point Numbers |
| FPDclustering | PD-Clustering and Related Methods |
| fpeek | Check Text Files Content at a Glance |
| fpest | Estimating Finite Population Total |
| FPLdata | Read in Fantasy Premier League Data |
| fplot | Automatic Distribution Graphs Using Formulas |
| fplyr | Apply Functions to Blocks of Files |
| fpop | Segmentation using Optimal Partitioning and Function Pruning |
| fpopw | Weighted Segmentation using Functional Pruning and Optimal Partioning |
| fPortfolio | Rmetrics - Portfolio Selection and Optimization |
| fpow | Computing the noncentrality parameter of the noncentral F distribution |
| fpp | Data for "Forecasting: principles and practice" |
| fpp2 | Data for "Forecasting: Principles and Practice" (2nd Edition) |
| fpp3 | Data for "Forecasting: Principles and Practice" (3rd Edition) |
| fptdApprox | Approximation of First-Passage-Time Densities for Diffusion Processes |
| FPV | Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment |
| fqacalc | Calculate Floristic Quality Assessment Metrics |
| fqadata | Contains Regional Floristic Quality Assessment Databases |
| fqar | Floristic Quality Assessment Tools for R |
| fr | Frictionless Standards |
| frab | How to Add Two R Tables |
| fracdiff | Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models |
| fracdist | Numerical CDFs for Fractional Unit Root and Cointegration Tests |
| FracKrigingR | Spatial Multivariate Data Modeling |
| fracprolif | Fraction Proliferation via a Quiescent Growth Model |
| fractaldim | Estimation of Fractal Dimensions |
| FractalParameterEstimation | Simulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model |
| fractD | Estimation of Fractal Dimension of a Black Area in 2D and 3D (Slices) Images |
| FRACTION | Numeric Number into Fraction |
| fractional | Vulgar Fractions in R |
| fracture | Convert Decimals to Fractions |
| fragility | Assessing and Visualizing Fragility of Clinical Results with Binary Outcomes |
| Fragman | Fragment Analysis in R |
| frailtyEM | Fitting Frailty Models with the EM Algorithm |
| frailtyHL | Frailty Models via Hierarchical Likelihood |
| frailtyMMpen | Efficient Algorithm for High-Dimensional Frailty Model |
| frailtypack | Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints |
| frailtySurv | General Semiparametric Shared Frailty Model |
| frair | Tools for Functional Response Analysis |
| framecleaner | Clean Data Frames |
| Frames2 | Estimation in Dual Frame Surveys |
| franc | Detect the Language of Text |
| FRAPO | Financial Risk Modelling and Portfolio Optimisation with R |
| frapplot | Automatic Data Processing and Visualization for FRAP |
| FRB | Fast and Robust Bootstrap |
| frbinom | Fractional Binomial Distributions |
| frbs | Fuzzy Rule-Based Systems for Classification and Regression Tasks |
| FRCC | Fast Regularized Canonical Correlation Analysis |
| frechet | Statistical Analysis for Random Objects and Non-Euclidean Data |
| fredr | An R Client for the 'FRED' API |
| free | Flexible Regularized Estimating Equations |
| freealg | The Free Algebra |
| freebird | Estimation and Inference for High Dimensional Mediation and Surrogate Analysis |
| freecurrencyapi | Client for the 'freecurrencyapi.com' Currency Conversion API |
| freedom | Demonstration of Disease Freedom (DDF) |
| freegroup | The Free Group |
| FreeSortR | Free Sorting Data Analysis |
| freesurfer | Wrapper Functions for 'Freesurfer' |
| freesurferformats | Read and Write 'FreeSurfer' Neuroimaging File Formats |
| FREEtree | Tree Method for High Dimensional Longitudinal Data |
| freewall | A Wrapper of the JavaScript Library 'Freewall' |
| fRegression | Rmetrics - Regression Based Decision and Prediction |
| frenchCurve | Generate Open or Closed Interpolating Curves |
| frenchdata | Download Data Sets from Kenneth's French Finance Data Library Site |
| FREQ | FREQ: Estimate population size from capture frequencies |
| freqdist | Frequency Distribution |
| freqdistributionNogives | Automated Cumulative Frequency Plots for Grouped Distribution |
| freqdom | Frequency Domain Based Analysis: Dynamic PCA |
| freqdom.fda | Functional Time Series: Dynamic Functional Principal Components |
| freqparcoord | Novel Methods for Parallel Coordinates |
| freqpcr | Estimates Allele Frequency on qPCR DeltaDeltaCq from Bulk Samples |
| FreqProf | Frequency Profiles Computing and Plotting |
| freqtables | Make Quick Descriptive Tables for Categorical Variables |
| frequency | Easy Frequency Tables |
| frequencyConnectedness | Spectral Decomposition of Connectedness Measures |
| frequentdirections | Implementation of Frequent-Directions Algorithm for Efficient Matrix Sketching |
| frequentistSSD | Screened Selection Design with Survival Endpoints |
| frequentistSSDBinary | Screened Selection Design with Binary Endpoints |
| FRESA.CAD | Feature Selection Algorithms for Computer Aided Diagnosis |
| fresh | Create Custom 'Bootstrap' Themes to Use in 'Shiny' |
| FRESHD | Fast Robust Estimation of Signals in Heterogeneous Data |
| freshr | Make R Environment Fresh Again |
| FrF2 | Fractional Factorial Designs with 2-Level Factors |
| FrF2.catlg128 | Catalogues of Resolution IV 128 Run 2-Level Fractional Factorials Up to 33 Factors that Do Have 5-Letter Words |
| FRI | Relative Importance of Main and Interaction Effects |
| frictionless | Read and Write Frictionless Data Packages |
| friends | The Entire Transcript from Friends in Tidy Format |
| fritools | Utilities for the Forest Research Institute of the State Baden-Wuerttemberg |
| fritools2 | Utilities for the Forest Research Institute of the State Baden-Wuerttemberg |
| FRK | Fixed Rank Kriging |
| fRLR | Fit Repeated Linear Regressions |
| fromo | Fast Robust Moments |
| frontier | Stochastic Frontier Analysis |
| frontiles | Partial Frontier Efficiency Analysis |
| frostr | R API to MET Norway's 'Frost' API |
| froth | Emulate a 'Forth' Programming Environment |
| frscore | Functions for Calculating Fit-Robustness of CNA-Solutions |
| fruclimadapt | Evaluation Tools for Assessing Climate Adaptation of Fruit Tree Species |
| fs | Cross-Platform File System Operations Based on 'libuv' |
| FSA | Simple Fisheries Stock Assessment Methods |
| FSAdata | Data to Support Fish Stock Assessment ('FSA') Package |
| fsbrain | Managing and Visualizing Brain Surface Data |
| fscache | File System Cache |
| fscaret | Automated Feature Selection from 'caret' |
| FSDAM | Forward Stepwise Deep Autoencoder-Based Monotone NLDR |
| fsdaR | Robust Data Analysis Through Monitoring and Dynamic Visualization |
| FSelector | Selecting Attributes |
| FSelectorRcpp | 'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support |
| fsemipar | Estimation, Variable Selection and Prediction for Functional Semiparametric Models |
| fsia | Import and Analysis of OMR Data from FormScanner |
| FSInteract | Fast Searches for Interactions |
| FSK2R | An Interface Between the 'FSKX' Standard and 'R' |
| fslr | Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB') |
| FSM | Finite Selection Model |
| fsn | Rosenthal's Fail Safe Number and Related Functions |
| fso | Fuzzy Set Ordination |
| fspe | Estimating the Number of Factors in EFA with Out-of-Sample Prediction Errors |
| fsr | Handling Fuzzy Spatial Data |
| fSRM | Social Relations Analyses with Roles ("Family SRM") |
| fssemR | Fused Sparse Structural Equation Models to Jointly Infer Gene Regulatory Network |
| FSSF | Generate Fully-Sequential Space-Filling Designs Inside a Unit Hypercube |
| fst | Lightning Fast Serialization of Data Frames |
| fst4pg | Genetic Distance Segmentation for Population Genetics |
| Fstability | Calculate Feature Stability |
| fstcore | R Bindings to the 'Fstlib' Library |
| fsthet | Fst-Heterozygosity Smoothed Quantiles |
| FSTpackage | Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores |
| ftaproxim | Fault Tree Analysis Based on Proxel Simulation |
| ftDK | A Wrapper for the API of the Danish Parliament |
| ftExtra | Extensions for 'Flextable' |
| fTrading | Rmetrics - Trading and Rebalancing Financial Instruments |
| ftrCOOL | Feature Extraction from Biological Sequences |
| ftsa | Functional Time Series Analysis |
| FTSgof | White Noise and Goodness-of-Fit Tests for Functional Time Series |
| ftsspec | Spectral Density Estimation and Comparison for Functional Time Series |
| fucom | Full Consistency Method (FUCOM) |
| fude | Utilities for Fude Polygon |
| fuel | Framework for Unified Estimation in Lognormal Models |
| fueleconomy | EPA Fuel Economy Data |
| fugue | Sensitivity Analysis Optimized for Matched Sets of Varied Sizes |
| fuj | Functions and Utilities for Jordan |
| fullfact | Full Factorial Breeding Analysis |
| fullRankMatrix | Generation of Full Rank Design Matrix |
| fullROC | Plot Full ROC Curves using Eyewitness Lineup Data |
| fun | Use R for Fun |
| func2vis | Clean and Visualize Over Expression Results from 'ConsensusPathDB' |
| FunCC | Functional Cheng and Church Bi-Clustering |
| FuncDiv | Compute Contributional Diversity Metrics |
| funcharts | Functional Control Charts |
| funchir | Convenience Functions by Michael Chirico |
| FunChisq | Model-Free Functional Chi-Squared and Exact Tests |
| FuncMap | Hive Plots of R Package Function Calls |
| FuncNN | Functional Neural Networks |
| FunctanSNP | Functional Analysis (with Interactions) for Dense SNP Data |
| functional | Curry, Compose, and other higher-order functions |
| functiondepends | Find Functions and their Dependencies |
| funData | An S4 Class for Functional Data |
| fundiversity | Easy Computation of Functional Diversity Indices |
| funFEM | Clustering in the Discriminative Functional Subspace |
| fungible | Psychometric Functions from the Waller Lab |
| funGp | Gaussian Process Models for Scalar and Functional Inputs |
| funique | A Faster Unique Function |
| fUnitRoots | Rmetrics - Modelling Trends and Unit Roots |
| funkycells | Functional Data Analysis for Multiplexed Cell Images |
| funkyheatmap | Generating Funky Heatmaps for Data Frames |
| funLBM | Model-Based Co-Clustering of Functional Data |
| funmediation | Functional Mediation for a Distal Outcome |
| funModeling | Exploratory Data Analysis and Data Preparation Tool-Box |
| funneljoin | Time-Based Joins to Analyze Sequences of Events |
| FunnelPlotR | Funnel Plots for Comparing Institutional Performance |
| funnelR | Funnel Plots for Proportion Data |
| funpca | Functional Principal Component Analysis |
| funprog | Functional Programming |
| funr | Simple Utility Providing Terminal Access to all R Functions |
| funrar | Functional Rarity Indices Computation |
| funreg | Functional Regression for Irregularly Timed Data |
| funspace | Creating and Representing Functional Trait Spaces |
| funspotr | Spot R Functions & Packages |
| funStatTest | Statistical Testing for Functional Data |
| FUNTA | Functional Tangential Angle Pseudo-Depth |
| funtimes | Functions for Time Series Analysis |
| FunWithNumbers | Fun with Fractions and Number Sequences |
| furniture | Furniture for Quantitative Scientists |
| furrr | Apply Mapping Functions in Parallel using Futures |
| fusedMGM | Implementation of Fused MGM to Infer 2-Class Networks |
| fusen | Build a Package from Rmarkdown Files |
| fuser | Fused Lasso for High-Dimensional Regression over Groups |
| fusionchartsR | Embedding FusionCharts in R |
| fusionclust | Clustering and Feature Screening using L1 Fusion Penalty |
| FusionLearn | Fusion Learning |
| futile.logger | A Logging Utility for R |
| futile.options | Futile Options Management |
| futility | Interim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up |
| future | Unified Parallel and Distributed Processing in R for Everyone |
| future.apply | Apply Function to Elements in Parallel using Futures |
| future.batchtools | A Future API for Parallel and Distributed Processing using 'batchtools' |
| future.callr | A Future API for Parallel Processing using 'callr' |
| future.mirai | A 'Future' API for Parallel Processing using 'mirai' |
| future.tests | Test Suite for 'Future API' Backends |
| futureverse | Easily Install and Load the 'Futureverse' |
| fuzzr | Fuzz-Test R Functions |
| Fuzzy.p.value | Computing Fuzzy p-Value |
| FuzzyAHP | (Fuzzy) AHP Calculation |
| FuzzyClass | Fuzzy and Non-Fuzzy Classifiers |
| FuzzyDBScan | Run and Predict a Fuzzy DBScan |
| fuzzyforest | Fuzzy Forests |
| FuzzyImputationTest | Imputation Procedures and Quality Tests for Fuzzy Data |
| fuzzyjoin | Join Tables Together on Inexact Matching |
| FuzzyLP | Fuzzy Linear Programming |
| FuzzyM | Fuzzy Cognitive Maps Operations |
| FuzzyNumbers | Tools to Deal with Fuzzy Numbers |
| FuzzyNumbers.Ext.2 | Apply Two Fuzzy Numbers on a Monotone Function |
| FuzzyPovertyR | Estimation of Fuzzy Poverty Measures |
| FuzzyQ | Fuzzy Quantification of Common and Rare Species |
| FuzzyR | Fuzzy Logic Toolkit for R |
| fuzzyRankTests | Fuzzy Rank Tests and Confidence Intervals |
| fuzzyreg | Fuzzy Linear Regression |
| FuzzyResampling | Resampling Methods for Triangular and Trapezoidal Fuzzy Numbers |
| fuzzySim | Fuzzy Similarity in Species Distributions |
| FuzzySimRes | Simulation and Resampling Methods for Epistemic Fuzzy Data |
| FuzzyStatProb | Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain |
| FuzzyStatTra | Statistical Methods for Trapezoidal Fuzzy Numbers |
| FuzzyStatTraEOO | Package 'FuzzyStatTra' in Encapsulated Object Oriented Programming |
| FuzzySTs | Fuzzy Statistical Tools |
| fuzzywuzzyR | Fuzzy String Matching |
| FVDDPpkg | Implement Fleming-Viot-Dependent Dirichlet Processes |
| fwb | Fractional Weighted Bootstrap |
| FWDselect | Selecting Variables in Regression Models |
| fwlplot | Scatter Plot After Residualizing Using 'fixest' Package |
| FWRGB | Fresh Weight Determination from Visual Image of the Plant |
| fwsim | Fisher-Wright Population Simulation |
| fxl | 'fxl' Single Case Design Charting Package |
| fxregime | Exchange Rate Regime Analysis |
| fxTWAPLS | An Improved Version of WA-PLS |
| fy | Utilities for Financial Years |
| g.data | Delayed-Data Packages |
| g.ridge | Generalized Ridge Regression for Linear Models |
| G2Sd | Grain-Size Statistics and Description of Sediment |
| g3viz | Interactively Visualize Genetic Mutation Data using a Lollipop-Diagram |
| GA | Genetic Algorithms |
| GABB | Facilitation of Data Preparation and Plotting Procedures for RDA and PCA Analyses |
| GACFF | Genetic Similarity in User-Based Collaborative Filtering |
| GAD | Analysis of Variance from General Principles |
| GADAG | A Genetic Algorithm for Learning Directed Acyclic Graphs |
| gadget2 | Gadget is the Globally-Applicable Area Disaggregated General Ecosystem Toolbox |
| gadget3 | Globally-Applicable Area Disaggregated General Ecosystem Toolbox V3 |
| gafit | Genetic Algorithm for Curve Fitting |
| GAGAs | Global Adaptive Generative Adjustment Algorithm for Generalized Linear Models |
| GAGBLUP | Genetic Algorithm Assisted Genomic Best Liner Unbiased Prediction |
| gaiah | Genetic and Isotopic Assignment Accounting for Habitat Suitability |
| gainML | Machine Learning-Based Analysis of Potential Power Gain from Passive Device Installation on Wind Turbine Generators |
| gains | Lift (Gains) Tables and Charts |
| GAIPE | Graphical Extension with Accuracy in Parameter Estimation (GAIPE) |
| galah | Biodiversity Data from the GBIF Node Network |
| galamm | Generalized Additive Latent and Mixed Models |
| galigor | Collection of Packages for Internet Marketing |
| gallery | Generate Test Matrices for Numerical Experiments |
| GALLO | Genomic Annotation in Livestock for Positional Candidate LOci |
| galts | Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation |
| galvanizer | Interface to Galvanize 'Highbond' Internal Audit Software |
| gam | Generalized Additive Models |
| gam.hp | Hierarchical Partitioning of Adjusted R2 and Explained Deviance for Generalized Additive Models |
| gamair | Data for 'GAMs: An Introduction with R' |
| gambin | Fit the Gambin Model to Species Abundance Distributions |
| gamblers.ruin.gameplay | One-Dimensional Random Walks Through Simulation of the Gambler's Ruin Problem |
| gamboostLSS | Boosting Methods for 'GAMLSS' |
| gamboostMSM | Boosting Multistate Models |
| gamclass | Functions and Data for a Course on Modern Regression and Classification |
| gamCopula | Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas |
| GAMens | Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification |
| gameR | Color Palettes Inspired by Video Games |
| gamesGA | Genetic Algorithm for Sequential Symmetric Games |
| GameTheory | Cooperative Game Theory |
| GameTheoryAllocation | Tools for Calculating Allocations in Game Theory |
| gamlr | Gamma Lasso Regression |
| gamlss | Generalized Additive Models for Location Scale and Shape |
| gamlss.add | Extra Additive Terms for Generalized Additive Models for Location Scale and Shape |
| gamlss.cens | Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions |
| gamlss.countKinf | Generating and Fitting K-Inflated 'discrete gamlss.family' Distributions |
| gamlss.data | Data for Generalised Additive Models for Location Scale and Shape |
| gamlss.demo | Demos for GAMLSS |
| gamlss.dist | Distributions for Generalized Additive Models for Location Scale and Shape |
| gamlss.foreach | Parallel Computations for Distributional Regression |
| gamlss.ggplots | Plotting Functions for Generalized Additive Model for Location Scale and Shape |
| gamlss.inf | Fitting Mixed (Inflated and Adjusted) Distributions |
| gamlss.lasso | Extra Lasso-Type Additive Terms for GAMLSS |
| gamlss.mx | Fitting Mixture Distributions with GAMLSS |
| gamlss.spatial | Spatial Terms in Generalized Additive Models for Location Scale and Shape Models |
| gamlss.tr | Generating and Fitting Truncated ‘gamlss.family’ Distributions |
| gamlssbssn | Bimodal Skew Symmetric Normal Distribution |
| gamlssx | Generalized Additive Extreme Value Models for Location, Scale and Shape |
| gamm4 | Generalized Additive Mixed Models using 'mgcv' and 'lme4' |
| gamma | Dose Rate Estimation from in-Situ Gamma-Ray Spectrometry Measurements |
| Gammareg | Classic Gamma Regression: Joint Modeling of Mean and Shape Parameters |
| gammi | Generalized Additive Mixed Model Interface |
| gammSlice | Generalized Additive Mixed Model Analysis via Slice Sampling |
| gamreg | Robust and Sparse Regression via Gamma-Divergence |
| gamRR | Calculate the RR for the GAM |
| gamsel | Fit Regularization Path for Generalized Additive Models |
| gamselBayes | Bayesian Generalized Additive Model Selection |
| gamstransfer | A Data Interface Between 'GAMS' and R |
| ganDataModel | Build a Metric Subspaces Data Model for a Data Source |
| ganGenerativeData | Generate Generative Data for a Data Source |
| GANPA | Gene Association Network-Based Pathway Analysis (GANPA) |
| GANPAdata | The GANPA Datasets Package |
| gap | Genetic Analysis Package |
| gap.datasets | Datasets for 'gap' |
| GAparsimony | Searching Parsimony Models with Genetic Algorithms |
| gapclosing | Estimate Gaps Under an Intervention |
| gapfill | Fill Missing Values in Satellite Data |
| gapmap | Drawing Gapped Cluster Heatmaps with 'ggplot2' |
| gapminder | Data from Gapminder |
| GARCHIto | Class of GARCH-Ito Models |
| GARCHSK | Estimating a GARCHSK Model and GJRSK Model |
| garchx | Flexible and Robust GARCH-X Modelling |
| GARCOM | Gene and Region Counting of Mutations ("GARCOM") |
| gargle | Utilities for Working with Google APIs |
| gargoyle | An Event-Based Mechanism for 'Shiny' |
| garma | Fitting and Forecasting Gegenbauer ARMA Time Series Models |
| garray | Generalized Array Arithmetic for Ragged Arrays with Named Margins |
| GAS | Generalized Autoregressive Score Models |
| gasanalyzer | Import, Recompute and Analyze Data from Portable Gas Analyzers |
| gaselect | Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data |
| gasfluxes | Greenhouse Gas Flux Calculation from Chamber Measurements |
| gasmodel | Generalized Autoregressive Score Models |
| GaSP | Train and Apply a Gaussian Stochastic Process Model |
| gasper | Graph Signal Processing |
| gastempt | Analyzing Gastric Emptying from MRI or Scintigraphy |
| gaston | Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models |
| gatepoints | Easily Gate or Select Points on a Scatter Plot |
| gateR | Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation |
| gatoRs | Geographic and Taxonomic Occurrence R-Based Scrubbing |
| GauPro | Gaussian Process Fitting |
| gauseR | Lotka-Volterra Models for Gause's 'Struggle for Existence' |
| gausscov | The Gaussian Covariate Method for Variable Selection |
| gaussDiff | Difference measures for multivariate Gaussian probability density functions |
| gaussfacts | The Greatest Mathematician Since Antiquity |
| GaussianHMM1d | Inference, Goodness-of-Fit and Forecast for Univariate Gaussian Hidden Markov Models |
| gaussplotR | Fit, Predict and Plot 2D Gaussians |
| gaussquad | Collection of Functions for Gaussian Quadrature |
| GaussSuppression | Tabular Data Suppression using Gaussian Elimination |
| gawdis | Multi-Trait Dissimilarity with more Uniform Contributions |
| gb | Generalize Lambda Distribution and Generalized Bootstrapping |
| GB2 | Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation |
| GB2group | Estimation of the Generalised Beta Distribution of the Second Kind from Grouped Data |
| GB5mcPred | Gradient Boosting Algorithm for Predicting Methylation States |
| gbeta | Generalized Beta and Beta Prime Distributions |
| gbfs | Interface with Live Bikeshare Data |
| gbifdb | High Performance Interface to 'GBIF' |
| GBJ | Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies |
| gbm | Generalized Boosted Regression Models |
| gbm.auto | Automated Boosted Regression Tree Modelling and Mapping Suite |
| gbm2sas | Convert GBM Object Trees to SAS Code |
| gbmt | Group-Based Multivariate Trajectory Modeling |
| gbp | A Bin Packing Problem Solver |
| gbRd | Utilities for Processing Rd Objects and Files |
| gbs2ploidy | Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data |
| gbts | Hyperparameter Search for Gradient Boosted Trees |
| gbutils | Utilities for Simulation, Plots, Quantile Functions and Programming |
| GCalcium | A Data Manipulation and Analysis Package for Calcium Indicator Data |
| GCalignR | Simple Peak Alignment for Gas-Chromatography Data |
| gCat | Graph-Based Two-Sample Tests for Categorical Data |
| gcbd | 'GPU'/CPU Benchmarking in Debian-Based Systems |
| GCCfactor | GCC Estimation of the Multilevel Factor Model |
| GCD | Global Charcoal Database |
| gcdnet | The (Adaptive) LASSO and Elastic Net Penalized Least Squares, Logistic Regression, Hybrid Huberized Support Vector Machines, Squared Hinge Loss Support Vector Machines and Expectile Regression using a Fast Generalized Coordinate Descent Algorithm |
| gcerisk | Generalized Competing Event Model |
| gcite | Google Citation Parser |
| gcKrig | Analysis of Geostatistical Count Data using Gaussian Copulas |
| gclm | Graphical Continuous Lyapunov Models |
| gclus | Clustering Graphics |
| gcmr | Gaussian Copula Marginal Regression |
| gconsensus | Consensus Value Constructor |
| gcookbook | Data for "R Graphics Cookbook" |
| GCPBayes | Bayesian Meta-Analysis of Pleiotropic Effects Using Group Structure |
| gcplyr | Wrangle and Analyze Growth Curve Data |
| GCPM | Generalized Credit Portfolio Model |
| GCSM | Implements Generic Composite Similarity Measure |
| gcTensor | Generalized Coupled Tensor Factorization |
| gcxgclab | GCxGC Preprocessing and Analysis |
| GD | Geographical Detectors for Assessing Spatial Factors |
| GDAdata | Datasets for the Book Graphical Data Analysis with R |
| gdalcubes | Earth Observation Data Cubes from Satellite Image Collections |
| gdalraster | Bindings to the 'Geospatial Data Abstraction Library' Raster API |
| gdalUtilities | Wrappers for 'GDAL' Utilities Executables |
| gdata | Various R Programming Tools for Data Manipulation |
| GDAtools | Geometric Data Analysis |
| gde | GBIF Dataset Explorer |
| GDELTtools | Download, Slice, and Normalize GDELT V1 Event and Sentiment API Data |
| gdi | Volumetric Analysis using Graphic Double Integration |
| gdiff | Graphical Difference Testing |
| GDILM.ME | Spatial Modeling of Infectious Diseases with Co-Variate Error |
| GDILM.SIR | Inference for Infectious Disease Transmission in SIR Framework |
| gdim | Estimate Graph Dimension using Cross-Validated Eigenvalues |
| GDINA | The Generalized DINA Model Framework |
| gdistance | Distances and Routes on Geographical Grids |
| gdldata | 'Global Data Lab' R API |
| gdm | Generalized Dissimilarity Modeling |
| gdpc | Generalized Dynamic Principal Components |
| GDPuc | Easily Convert GDP Data |
| gds | Descriptive Statistics of Grouped Data |
| GDSARM | Gauss - Dantzig Selector: Aggregation over Random Models |
| gdtools | Utilities for Graphical Rendering and Fonts Management |
| gdverse | Analysis of Spatial Stratified Heterogeneity |
| gdxdt | IO for GAMS GDX Files using 'data.table' |
| GE | General Equilibrium Modeling |
| gear | Geostatistical Analysis in R |
| geboes.score | Evaluate the Geboes Score for Histology in Ulcerative Colitis |
| GEC | Generalized Exponentiated Composite Distributions |
| GECal | Generalized Entropy Calibration |
| gecko | Geographical Ecology and Conservation Knowledge Online |
| GeDS | Geometrically Designed Spline Regression |
| gee | Generalized Estimation Equation Solver |
| GEEaSPU | Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE) |
| geeasy | Solve Generalized Estimating Equations for Clustered Data |
| geeCRT | Bias-Corrected GEE for Cluster Randomized Trials |
| geecure | Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations |
| geeM | Solve Generalized Estimating Equations |
| GEEmediate | Mediation Analysis for Generalized Linear Models Using the Difference Method |
| geepack | Generalized Estimating Equation Package |
| geesmv | Modified Variance Estimators for Generalized Estimating Equations |
| geessbin | Modified Generalized Estimating Equations for Binary Outcome |
| geeVerse | A Comprehensive Analysis of High Dimensional Longitudinal Data |
| geex | An API for M-Estimation |
| geigen | Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack |
| geiger | Analysis of Evolutionary Diversification |
| GEInfo | Gene-Environment Interaction Analysis Incorporating Prior Information |
| GEInter | Robust Gene-Environment Interaction Analysis |
| gellipsoid | Generalized Ellipsoids |
| gelnet | Generalized Elastic Nets |
| GEmetrics | Best Linear Unbiased Prediction of Genotype-by-Environment Metrics |
| gemini.R | Interface for 'Google Gemini' API |
| gemma2 | GEMMA Multivariate Linear Mixed Model |
| gems | Generalized Multistate Simulation Model |
| gemtc | Network Meta-Analysis Using Bayesian Methods |
| gen2stage | Generalized Two-Stage Designs for Phase II Single-Arm Studies |
| gen3sis | General Engine for Eco-Evolutionary Simulations |
| gen5helper | Processing 'Gen5' 2.06 Exported Data |
| gena | Genetic Algorithm and Particle Swarm Optimization |
| GenAI | Generative Artificial Intelligence |
| genalg | R Based Genetic Algorithm |
| GenAlgo | Classes and Methods to Use Genetic Algorithms for Feature Selection |
| genBaRcode | Analysis and Visualization Tools for Genetic Barcode Data |
| GenBinomApps | Clopper-Pearson Confidence Interval and Generalized Binomial Distribution |
| gencor | Generate Customized Correlation Matrices |
| genCountR | Interacting with Roberts and Utych's (2019) Gendered Language Dictionary |
| gendata | Generate and Modify Synthetic Datasets |
| gender | Predict Gender from Names Using Historical Data |
| genderBR | Predict Gender from Brazilian First Names |
| GenderInfer | This is a Collection of Functions to Analyse Gender Differences |
| genderstat | Quantitative Analysis Tools for Gender Studies |
| gendist | Generated Probability Distribution Models |
| GENEAclassify | Segmentation and Classification of Accelerometer Data |
| GENEAread | Package for Reading Binary Files |
| GeneCycle | Identification of Periodically Expressed Genes |
| geneExpressionFromGEO | Easily Downloads a Gene Expression Dataset from a GEO Code and Retrieves the Gene Symbols of Its Probesets |
| GeneF | Package for Generalized F-Statistics |
| geneHapR | Gene Haplotype Statistics, Phenotype Association and Visualization |
| geneHummus | A Pipeline to Define Gene Families in Legumes and Beyond |
| genekitr | Gene Analysis Toolkit |
| genemodel | Gene Model Plotting in R |
| GeneNet | Modeling and Inferring Gene Networks |
| GeneNMF | Non-Negative Matrix Factorization for Single-Cell Omics |
| genepi | Genetic Epidemiology Design and Inference |
| genepop | Population Genetic Data Analysis Using Genepop |
| generalCorr | Generalized Correlations, Causal Paths and Portfolio Selection |
| generalhoslem | Goodness of Fit Tests for Logistic Regression Models |
| GeneralisedCovarianceMeasure | Test for Conditional Independence Based on the Generalized Covariance Measure (GCM) |
| GeneralizedHyperbolic | The Generalized Hyperbolic Distribution |
| GeneralizedUmatrix | Credible Visualization for Two-Dimensional Projections of Data |
| GeneralizedWendland | Fully Parameterized Generalized Wendland Covariance Function |
| GeneralOaxaca | Blinder-Oaxaca Decomposition for Generalized Linear Model |
| generator | Generate Data Containing Fake Personally Identifiable Information |
| GenericML | Generic Machine Learning Inference |
| generics | Common S3 Generics not Provided by Base R Methods Related to Model Fitting |
| genero | Estimate Gender from Names in Spanish and Portuguese |
| GeneScape | Simulation of Single Cell RNA-Seq Data with Complex Structure |
| GeneScoreR | Gene Scoring from Count Tables |
| GeneSelectR | 'GeneSelectR' - Comprehensive Feature Selection Workflow for Bulk RNAseq Datasets |
| geneset | Get Gene Sets for Gene Enrichment Analysis |
| geneSLOPE | Genome-Wide Association Study with SLOPE |
| GenEst | Generalized Mortality Estimator |
| genesysr | Genesys PGR Client |
| genetic.algo.optimizeR | Genetic Algorithm Optimization |
| geneticae | Statistical Tools for the Analysis of Multi Environment Agronomic Trials |
| genetics | Population Genetics |
| GeneticSubsetter | Identify Favorable Subsets of Germplasm Collections |
| GeNetIt | Spatial Graph-Theoretic Genetic Gravity Modelling |
| genfrn | Generating Triangular and Trapezoidal Fuzzy Random Numbers via Uniform Distribution |
| genie | Fast, Robust, and Outlier Resistant Hierarchical Clustering |
| genieBPC | Project GENIE BioPharma Collaborative Data Processing Pipeline |
| genieclust | Fast and Robust Hierarchical Clustering with Noise Points Detection |
| genio | Genetics Input/Output Functions |
| geniusr | Tools for Working with the 'Genius' API |
| genlasso | Path Algorithm for Generalized Lasso Problems |
| GENLIB | Genealogical Data Analysis |
| genlogis | Generalized Logistic Distribution |
| GenMarkov | Multivariate Markov Chains |
| genMCMCDiag | Generalized Convergence Diagnostics for Difficult MCMC Algorithms |
| GENMETA | Implements Generalized Meta-Analysis Using Iterated Reweighted Least Squares Algorithm |
| geno2proteo | Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci |
| genodds | Generalised Odds Ratios |
| genogeographer | Methods for Analysing Forensic Ancestry Informative Markers |
| GenomeAdmixR | Simulate Admixture of Genomes |
| genomic.autocorr | Models Dealing with Spatial Dependency in Genomic Data |
| genomicper | Circular Genomic Permutation using Genome Wide Association p-Values |
| GenomicSig | Computation of Genomic Signatures |
| GenomicTools.fileHandler | File Handlers for Genomic Data Analysis |
| genoPlotR | Plot Publication-Grade Gene and Genome Maps |
| GenoPop | Genotype Imputation and Population Genomics Efficiently from Variant Call Formatted (VCF) Files |
| GenOrd | Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions |
| GenoScan | A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis |
| GenoTriplo | Genotyping Triploids (or Diploids) from Luminescence Data |
| genpathmox | Pathmox Approach Segmentation Tree Analysis |
| genpwr | Power Calculations Under Genetic Model Misspecification |
| genridge | Generalized Ridge Trace Plots for Ridge Regression |
| GenSA | R Functions for Generalized Simulated Annealing |
| genscore | Generalized Score Matching Estimators |
| genSEIR | Predict Epidemic Curves with Generalized SEIR Modeling |
| genset | Generates Data Sets for Class Demonstrations |
| gensphere | Generalized Spherical Distributions |
| genstab | Resampling Based Yield Stability Analyses |
| genSurv | Generating Multi-State Survival Data |
| gensvm | A Generalized Multiclass Support Vector Machine |
| GenTag | Generate Color Tag Sequences |
| genTS | R Shiny App for Creating Simplified Trial Summary (TS) Domain |
| GenTwoArmsTrialSize | Generalized Two Arms Clinical Trial Sample Size Calculation |
| genular | 'Genular' Database API |
| GenWin | Spline Based Window Boundaries for Genomic Analyses |
| GeoAdjust | Accounting for Random Displacements of True GPS Coordinates of Data |
| geoAr | Argentina's Spatial Data Toolbox |
| geoarrow | Extension Types for Spatial Data for Use with 'Arrow' |
| geoBayes | Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods |
| geobr | Download Official Spatial Data Sets of Brazil |
| geocacheR | Tools for Geocaching |
| geocausal | Causal Inference with Spatio-Temporal Data |
| geocmeans | Implementing Methods for Spatial Fuzzy Unsupervised Classification |
| geocomplexity | Mitigating Spatial Bias Through Geographical Complexity |
| geodaData | Spatial Analysis Datasets for Teaching |
| geodata | Download Geographic Data |
| geodetector | Stratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation |
| geodimension | Definition of Geographic Dimensions |
| geodist | Fast, Dependency-Free Geodesic Distance Calculations |
| geodiv | Methods for Calculating Gradient Surface Metrics |
| geodl | Geospatial Semantic Segmentation with Torch and Terra |
| geodrawr | Making Geospatial Objects |
| GeodRegr | Geodesic Regression |
| geoelectrics | 3D-Visualization of Geoelectric Resistivity Measurement Profiles |
| geofacet | 'ggplot2' Faceting Utilities for Geographical Data |
| geofi | Access Finnish Geospatial Data |
| GeoFIS | Spatial Data Processing for Decision Making |
| geoFKF | Kriging Method for Spatial Functional Data |
| geoFourierFDA | Ordinary Functional Kriging Using Fourier Smoothing and Gaussian Quadrature |
| geoGAM | Select Sparse Geoadditive Models for Spatial Prediction |
| geogenr | Generator from American Community Survey Geodatabases |
| geogrid | Turn Geospatial Polygons into Regular or Hexagonal Grids |
| geohashTools | Tools for Working with Geohashes |
| geoheatmap | Create Geospatial Cartogram Heatmaps |
| geoidep | Download Geographic Data on Various Topics Provided and Managed by the Spatial Data Infrastructure of Peru |
| geojson | Classes for 'GeoJSON' |
| geojsonio | Convert Data from and to 'GeoJSON' or 'TopoJSON' |
| geojsonR | A GeoJson Processing Toolkit |
| geojsonsf | GeoJSON to Simple Feature Converter |
| geomander | Geographic Tools for Studying Gerrymandering |
| GEOmap | Topographic and Geologic Mapping |
| geomapdata | Data for Topographic and Geologic Mapping |
| GeomArchetypal | Finds the Geometrical Archetypal Analysis of a Data Frame |
| geomaroc | Easily Visualize Geographic Data of Morocco |
| GeomComb | (Geometric) Forecast Combination Methods |
| geomerge | Geospatial Data Integration |
| geometa | Tools for Reading and Writing ISO/OGC Geographic Metadata |
| geometries | Convert Between R Objects and Geometric Structures |
| geometry | Mesh Generation and Surface Tessellation |
| geommc | Geometric Markov Chain Sampling |
| geomod | A Computer Program for Geotechnical Investigations |
| GeoModels | Procedures for Gaussian and Non Gaussian Geostatistical (Large) Data Analysis |
| GeoMongo | Geospatial Queries Using 'PyMongo' |
| geomorph | Geometric Morphometric Analyses of 2D and 3D Landmark Data |
| geomtextpath | Curved Text in 'ggplot2' |
| geomultistar | Multidimensional Queries Enriched with Geographic Data |
| geonames | Interface to the "Geonames" Spatial Query Web Service |
| geonapi | 'GeoNetwork' API R Interface |
| geonetwork | Geographic Networks |
| geonode4R | Interface to 'GeoNode' REST API |
| geoperu | Download Spatial Datasets of Peru |
| geoR | Analysis of Geostatistical Data |
| GeoRange | Calculating Geographic Range from Occurrence Data |
| georefdatar | Geosciences Reference Datasets |
| georob | Robust Geostatistical Analysis of Spatial Data |
| geos | Open Source Geometry Engine ('GEOS') R API |
| geoSAE | Geoadditive Small Area Model |
| geosapi | GeoServer REST API R Interface |
| geoscale | Geological Time Scale Plotting |
| geosed | Smallest Enclosing Disc for Latitude and Longitude Points |
| geosimilarity | Geographically Optimal Similarity |
| geospark | Bring Local Sf to Spark |
| geosphere | Spherical Trigonometry |
| geospt | Geostatistical Analysis and Design of Optimal Spatial Sampling Networks |
| geosptdb | Spatio-Temporal Radial Basis Functions with Distance-Based Methods (Optimization, Prediction and Cross Validation) |
| geostan | Bayesian Spatial Analysis |
| geostats | An Introduction to Statistics for Geoscientists |
| geostatsp | Geostatistical Modelling with Likelihood and Bayes |
| GeoThinneR | Simple Spatial Thinning for Ecological and Spatial Analysis |
| geotools | Geo tools |
| geotoolsR | Tools to Improve the Use of Geostatistic |
| geotopbricks | An R Plug-in for the Distributed Hydrological Model GEOtop |
| GeoTox | Spatiotemporal Mixture Risk Assessment |
| geoTS | Methods for Handling and Analyzing Time Series of Satellite Images |
| geouy | Geographic Information of Uruguay |
| geovol | Geopolitical Volatility (GEOVOL) Modelling |
| GeoWeightedModel | User-Friendly Interface for Geographically-Weighted Models |
| geozoo | Zoo of Geometric Objects |
| gepaf | Google Encoded Polyline Algorithm Format |
| GephiForR | 'Gephi' Network Visualization |
| geppe | Generalised Exponential Poisson and Poisson Exponential Distributions |
| gerbil | Generalized Efficient Regression-Based Imputation with Latent Processes |
| gerefer | Preparer of Main Scientific References for Automatic Insertion in Academic Papers |
| GerminaR | Indices and Graphics for Assess Seed Germination Process |
| germinationmetrics | Seed Germination Indices and Curve Fitting |
| GeRnika | Simulation, Visualization and Comparison of Tumor Evolution Data |
| gert | Simple Git Client for R |
| gesca | Generalized Structured Component Analysis Structural Equation Modeling |
| GESE | Gene-Based Segregation Test |
| gesisdata | Reproducible Data Retrieval from the GESIS Data Archive |
| geslaR | Get and Manipulate the GESLA Dataset |
| gesso | Hierarchical GxE Interactions in a Regularized Regression Model |
| gestalt | Tools for Making and Combining Functions |
| gestate | Generalised Survival Trial Assessment Tool Environment |
| gesttools | General Purpose G-Estimation for End of Study or Time-Varying Outcomes |
| GET | Global Envelopes |
| getable | Fetching Tabular Data "Onload" in Compiled R Markdown HTML Documents |
| GetBCBData | Imports Datasets from BCB (Central Bank of Brazil) using Its Official API |
| GETdesigns | Generalized Extended Triangular Designs ('GETdesigns') |
| GetDFPData | Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System |
| GetDFPData2 | Reading Annual and Quarterly Financial Reports from B3 |
| getDTeval | Translating Coding Statements using get() and eval() for Improved Run-Time Coding Efficiency |
| GetFREData | Reading FRE Corporate Data of Public Traded Companies from B3 |
| getip | 'IP' Address 'Lookup' |
| getLattes | Import and Process Data from the 'Lattes' Curriculum Platform |
| GetLattesData | Reading Bibliometric Data from Lattes Platform |
| getmstatistic | Quantifying Systematic Heterogeneity in Meta-Analysis |
| getopt | C-Like 'getopt' Behavior |
| GetoptLong | Parsing Command-Line Arguments and Simple Variable Interpolation |
| getPass | Masked User Input |
| getProxy | Get Free Proxy IP and Port |
| GetQuandlData | Fast and Cached Import of Data from 'Quandl' Using the 'json API' |
| gets | General-to-Specific (GETS) Modelling and Indicator Saturation Methods |
| getspanel | General-to-Specific Modelling of Panel Data |
| getspres | SPRE Statistics for Exploring Heterogeneity in Meta-Analysis |
| GetTDData | Get Data for Brazilian Bonds (Tesouro Direto) |
| gettz | Get the Timezone Information |
| getwiki | R Wrapper for Wikipedia Data |
| GEVACO | Joint Test of Gene and GxE Interactions via Varying Coefficients |
| GEVcdn | GEV Conditional Density Estimation Network |
| gexp | Generator of Experiments |
| geysertimes | Geyser Data from GeyserTimes.org |
| GFA | Group Factor Analysis |
| gfboost | Gradient-Free Gradient Boosting |
| gfcanalysis | Tools for Working with Hansen et al. Global Forest Change Dataset |
| GFD | Tests for General Factorial Designs |
| GFDmcv | General Hypothesis Testing Problems for Multivariate Coefficients of Variation |
| GFDrmst | Multiple RMST-Based Tests in General Factorial Designs |
| GFDrmtl | Multiple RMTL-Based Tests for Competing Risks Data in General Factorial Designs |
| GFDsurv | Tests for Survival Data in General Factorial Designs |
| GFE | Gross Flows Estimation under Complex Surveys |
| gfer | Green Finance and Environmental Risk |
| GFGM.copula | Generalized Farlie-Gumbel-Morgenstern Copula |
| gfiExtremes | Generalized Fiducial Inference for Extremes |
| GFisher | Generalized Fisher's Combination Tests Under Dependence |
| gfiUltra | Generalized Fiducial Inference for Ultrahigh-Dimensional Regression |
| GFM | Generalized Factor Model |
| gfonts | Offline 'Google' Fonts for 'Markdown' and 'Shiny' |
| gfoRmula | Parametric G-Formula |
| gFormulaMI | G-Formula for Causal Inference via Multiple Imputation |
| gfunctions | G-Functions |
| gg.gap | Define Segments in y-Axis for 'ggplot2' |
| ggalign | A 'ggplot2' Extension for Consistent Axis Alignment |
| ggaligner | Visualizing Sequence Alignment by Generating Publication-Ready Plots |
| ggalignment | Plots 'D&D'-Style Alignment Charts |
| ggallin | Grab Bag of 'ggplot2' Functions |
| ggalluvial | Alluvial Plots in 'ggplot2' |
| GGally | Extension to 'ggplot2' |
| ggalt | Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2' |
| ggamma | Generalized Gamma Probability Distribution |
| gganimate | A Grammar of Animated Graphics |
| ggarchery | Flexible Segment Geoms with Arrows for 'ggplot2' |
| ggarrow | Arrows for 'ggplot2' |
| ggautomap | Create Maps from a Column of Place Names |
| ggbeeswarm | Categorical Scatter (Violin Point) Plots |
| ggbiplot | A Grammar of Graphics Implementation of Biplots |
| ggblanket | Simplify 'ggplot2' Visualisation |
| ggblend | Blending and Compositing Algebra for 'ggplot2' |
| ggborderline | Line Plots that Pop |
| ggbrace | Curly Braces for 'ggplot2' |
| ggbrain | Create Images of Volumetric Brain Data in NIfTI Format Using 'ggplot2' Syntax |
| ggbreak | Set Axis Break for 'ggplot2' |
| ggbrick | Waffle Style Chart with a Brick Layout in 'ggplot2' |
| ggBubbles | Mini Bubble Plots for Comparison of Discrete Data with 'ggplot2' |
| ggbuildr | Save Incremental Builds of Plots |
| ggbump | Bump Chart and Sigmoid Curves |
| ggchangepoint | Combines Changepoint Analysis with 'ggplot2' |
| ggcharts | Shorten the Distance from Data Visualization Idea to Actual Plot |
| ggChernoff | Chernoff Faces for 'ggplot2' |
| GGClassification | Gabriel Graph Based Large-Margin Classifiers |
| ggcleveland | Implementation of Plots from Cleveland's Visualizing Data Book |
| ggcompare | Mean Comparison in 'ggplot2' |
| ggcorrplot | Visualization of a Correlation Matrix using 'ggplot2' |
| ggcorset | The Corset Plot |
| ggdag | Analyze and Create Elegant Directed Acyclic Graphs |
| ggdark | Dark Mode for 'ggplot2' Themes |
| ggdaynight | Add Day/Night Patterns to 'ggplot2' Plots |
| ggdemetra | 'ggplot2' Extension for Seasonal and Trading Day Adjustment with 'RJDemetra' |
| ggdendro | Create Dendrograms and Tree Diagrams Using 'ggplot2' |
| ggdensity | Interpretable Bivariate Density Visualization with 'ggplot2' |
| ggdist | Visualizations of Distributions and Uncertainty |
| ggdmc | Cognitive Models |
| ggDoE | Modern Graphs for Design of Experiments with 'ggplot2' |
| ggDoubleHeat | A Heatmap-Like Visualization Tool |
| gge | Genotype Plus Genotype-by-Environment Biplots |
| ggeasy | Easy Access to 'ggplot2' Commands |
| GGEBiplots | GGE Biplots with 'ggplot2' |
| ggedit | Interactive 'ggplot2' Layer and Theme Aesthetic Editor |
| ggeffects | Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs |
| ggenealogy | Visualization Tools for Genealogical Data |
| ggESDA | Exploratory Symbolic Data Analysis with 'ggplot2' |
| ggetho | Visualisation of High-Throughput Behavioural (i.e. Ethomics) Data |
| ggExtra | Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements |
| ggfacto | Graphs for Correspondence Analysis |
| ggfields | Add Vector Field Layers to Ggplots |
| ggfigdone | Manage & Modify 'ggplot' Figures using 'ggfigdone' |
| ggFishPlots | Visualise and Calculate Life History Parameters for Fisheries Science using 'ggplot2' |
| ggfittext | Fit Text Inside a Box in 'ggplot2' |
| ggfixest | Dedicated 'ggplot2' Methods for 'fixest' Objects |
| ggflowchart | Flowcharts with 'ggplot2' |
| ggfocus | Scales that Focus Specific Levels in your ggplot() |
| ggforce | Accelerating 'ggplot2' |
| ggformula | Formula Interface to the Grammar of Graphics |
| ggfortify | Data Visualization Tools for Statistical Analysis Results |
| ggfoundry | Shape Foundry & Geom for 'ggplot2' |
| ggfun | Miscellaneous Functions for 'ggplot2' |
| ggfx | Pixel Filters for 'ggplot2' and 'grid' |
| gggap | Streamlined Creation of Segments on the Y-Axis of 'ggplot2' Plots |
| gggenes | Draw Gene Arrow Maps in 'ggplot2' |
| gggenomes | A Grammar of Graphics for Comparative Genomics |
| ggghost | Capture the Spirit of Your 'ggplot2' Calls |
| gggibbous | Moon Charts, a Pie Chart Alternative |
| gggrid | Draw with 'grid' in 'ggplot2' |
| ggh4x | Hacks for 'ggplot2' |
| gghalfnorm | Create a Half Normal Plot Using 'ggplot2' |
| gghalves | Compose Half-Half Plots Using Your Favourite Geoms |
| gghdx | HDX Theme, Scales, and Other Conveniences for 'ggplot2' |
| ggheatmap | Plot Heatmap |
| gghighlight | Highlight Lines and Points in 'ggplot2' |
| gghilbertstrings | A Fast 'ggplot2'-Based Implementation of Hilbert Curves |
| gghist | Plot the Histogram of a Numeric Vector |
| ggHoriPlot | Horizon Plots for 'ggplot2' |
| ggimage | Use Image in 'ggplot2' |
| ggimg | Graphics Layers for Plotting Image Data with 'ggplot2' |
| gginference | Visualise the Results of Inferential Statistics using 'ggplot2' |
| gginnards | Explore the Innards of 'ggplot2' Objects |
| ggip | Data Visualization for IP Addresses and Networks |
| GGIR | Raw Accelerometer Data Analysis |
| ggiraph | Make 'ggplot2' Graphics Interactive |
| ggiraphExtra | Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph' |
| GGIRread | Wearable Accelerometer Data File Readers |
| ggisotonic | 'ggplot2' Friendly Isotonic or Monotonic Regression Curves |
| ggjoy | Joyplots in 'ggplot2' |
| gglasso | Group Lasso Penalized Learning Using a Unified BMD Algorithm |
| gglgbtq | Show Pride on 'ggplot2' Plots |
| gglm | Grammar of Graphics for Linear Model Diagnostic Plots |
| gglogger | Track 'ggplot2' Calls |
| gglorenz | Plotting Lorenz Curve with the Blessing of 'ggplot2' |
| ggm | Graphical Markov Models with Mixed Graphs |
| ggmap | Spatial Visualization with ggplot2 |
| ggmapinset | Add Inset Panels to Maps |
| ggmatplot | Plot Columns of Two Matrices Against Each Other Using 'ggplot2' |
| ggmcmc | Tools for Analyzing MCMC Simulations from Bayesian Inference |
| ggmice | Visualizations for 'mice' with 'ggplot2' |
| ggmix | Variable Selection in Linear Mixed Models for SNP Data |
| GGMncv | Gaussian Graphical Models with Nonconvex Regularization |
| GGMnonreg | Non-Regularized Gaussian Graphical Models |
| ggmosaic | Mosaic Plots in the 'ggplot2' Framework |
| ggmr | Generalized Gauss Markov Regression |
| GGMridge | Gaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation |
| GGMselect | Gaussian Graphs Models Selection |
| ggmugs | Visualization of Multiple Genome-Wide Association Study Summary Statistics |
| ggmuller | Create Muller Plots of Evolutionary Dynamics |
| ggmulti | High Dimensional Data Visualization |
| ggnetwork | Geometries to Plot Networks with 'ggplot2' |
| ggnewscale | Multiple Fill and Colour Scales in 'ggplot2' |
| ggnormalviolin | A 'ggplot2' Extension to Make Normal Violin Plots |
| ggnuplot | Make 'ggplot2' Look Like 'gnuplot' |
| ggOceanMaps | Plot Data on Oceanographic Maps using 'ggplot2' |
| ggokabeito | 'Okabe-Ito' Scales for 'ggplot2' and 'ggraph' |
| ggordiplots | Make 'ggplot2' Versions of Vegan's Ordiplots |
| GGoutlieR | Identify Individuals with Unusual Geo-Genetic Patterns |
| ggpackets | Package Plot Layers for Easier Portability and Modularization |
| ggpage | Creates Page Layout Visualizations |
| ggparallel | Variations of Parallel Coordinate Plots for Categorical Data |
| ggparty | 'ggplot' Visualizations for the 'partykit' Package |
| ggpath | Robust Image Rendering Support for 'ggplot2' |
| ggpattern | 'ggplot2' Pattern Geoms |
| ggpca | Publication-Ready PCA, t-SNE, and UMAP Plots |
| ggpcp | Parallel Coordinate Plots in the 'ggplot2' Framework |
| ggperiodic | Easy Plotting of Periodic Data with 'ggplot2' |
| ggpicrust2 | Make 'PICRUSt2' Output Analysis and Visualization Easier |
| ggpie | Pie, Donut and Rose Pie Plots |
| ggplate | Create Layout Plots of Biological Culture Plates and Microplates |
| ggplot.multistats | Multiple Summary Statistics for Binned Stats/Geometries |
| ggplot2 | Create Elegant Data Visualisations Using the Grammar of Graphics |
| ggplot2.utils | Selected Utilities Extending 'ggplot2' |
| ggplot2movies | Movies Data |
| ggplotAssist | 'RStudio' Addin for Teaching and Learning 'ggplot2' |
| ggplotgui | Create Ggplots via a Graphical User Interface |
| ggplotify | Convert Plot to 'grob' or 'ggplot' Object |
| ggplotlyExtra | Extra Convenience Functions for 'Plotly' |
| ggpmisc | Miscellaneous Extensions to 'ggplot2' |
| ggPMX | 'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models |
| ggpointdensity | A Cross Between a 2D Density Plot and a Scatter Plot |
| ggpointless | Additional Geometries and Stats for 'ggplot2' |
| ggpol | Visualizing Social Science Data with 'ggplot2' |
| ggpolar | Dots and Their Connections in Polar Coordinate System |
| ggpolypath | Polygons with Holes for the Grammar of Graphics |
| ggpp | Grammar Extensions to 'ggplot2' |
| ggprism | A 'ggplot2' Extension Inspired by 'GraphPad Prism' |
| ggpubr | 'ggplot2' Based Publication Ready Plots |
| ggpval | Annotate Statistical Tests for 'ggplot2' |
| ggQC | Quality Control Charts for 'ggplot' |
| ggQQunif | Compare Big Datasets to the Uniform Distribution |
| ggquickeda | Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables |
| ggquiver | Quiver Plots for 'ggplot2' |
| ggragged | Ragged Grids for 'ggplot2' |
| ggrain | A Rainclouds Geom for 'ggplot2' |
| ggRandomForests | Visually Exploring Random Forests |
| ggraph | An Implementation of Grammar of Graphics for Graphs and Networks |
| ggraptR | Allows Interactive Visualization of Data Through a Web Browser GUI |
| ggrasp | Gaussian-Based Genome Representative Selector with Prioritization |
| ggrastr | Rasterize Layers for 'ggplot2' |
| ggrcs | Draw Histograms and Restricted Cubic Splines (RCS) |
| ggredist | Scales, Geometries, and Extensions of 'ggplot2' for Election Mapping |
| ggrepel | Automatically Position Non-Overlapping Text Labels with 'ggplot2' |
| ggResidpanel | Panels and Interactive Versions of Diagnostic Plots using 'ggplot2' |
| ggreveal | Reveal a 'ggplot' Incrementally |
| GGRidge | Graphical Group Ridge |
| ggridges | Ridgeline Plots in 'ggplot2' |
| ggrisk | Risk Score Plot for Cox Regression |
| ggrounded | Rounded Bar Plots |
| ggroups | Pedigree and Genetic Groups |
| ggRtsy | Add Some Van Gogh Colors and Overlay Colors on Your 'ggplot()' |
| ggsankeyfier | Create Sankey and Alluvial Diagrams Using 'ggplot2' |
| ggScatRidges | Scatter Plot Combined with Ridgelines in 'ggplot2' |
| ggsci | Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2' |
| ggscidca | Plotting Decision Curve Analysis with Coloured Bars |
| ggseas | 'stats' for Seasonal Adjustment on the Fly with 'ggplot2' |
| ggsector | Draw Sectors |
| ggseg | Plotting Tool for Brain Atlases |
| ggseg3d | Tri-Surface Mesh Plots for Brain Atlases |
| ggsem | Interactively Visualize Structural Equation Modeling Diagrams |
| ggseqlogo | A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos |
| ggseqplot | Render Sequence Plots using 'ggplot2' |
| ggshadow | Shadow and Glow Geoms for 'ggplot2' |
| ggside | Side Grammar Graphics |
| ggsignif | Significance Brackets for 'ggplot2' |
| ggsmc | Visualising Output from Sequential Monte Carlo Samplers and Ensemble-Based Methods |
| ggsoccer | Plot Soccer Event Data |
| ggsolvencyii | A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM |
| ggsom | New Data Visualisations for SOMs Networks |
| ggspark | 'ggplot2' Functions to Create Tufte Style Sparklines |
| ggspatial | Spatial Data Framework for ggplot2 |
| ggspectra | Extensions to 'ggplot2' for Radiation Spectra |
| ggstance | Horizontal 'ggplot2' Components |
| ggstar | Multiple Geometric Shape Point Layer for 'ggplot2' |
| ggstats | Extension to 'ggplot2' for Plotting Stats |
| ggstatsplot | 'ggplot2' Based Plots with Statistical Details |
| ggstream | Create Streamplots in 'ggplot2' |
| ggstudent | Continuous Confidence Interval Plots using t-Distribution |
| ggsurvey | Simplifying 'ggplot2' for Survey Data |
| ggsurvfit | Flexible Time-to-Event Figures |
| ggswissmaps | Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects |
| ggtangle | Draw Network with Data |
| ggtea | Palettes and Themes for 'ggplot2' |
| ggtern | An Extension to 'ggplot2', for the Creation of Ternary Diagrams |
| ggtext | Improved Text Rendering Support for 'ggplot2' |
| ggThemeAssist | Add-in to Customize 'ggplot2' Themes |
| ggthemes | Extra Themes, Scales and Geoms for 'ggplot2' |
| ggthemeUL | A 'ggplot' Theme for University of Ljubljana |
| ggtibble | Create Tibbles and Lists of 'ggplot' Figures for Reporting |
| ggtikz | Post-Process 'ggplot2' Plots with 'TikZ' Code Using Plot Coordinates |
| ggTimeSeries | Time Series Visualisations Using the Grammar of Graphics |
| ggtrace | Trace and Highlight Groups of Data Points |
| ggtrendline | Add Trendline and Confidence Interval to 'ggplot' |
| ggtricks | Create Sector and Other Charts Easily Using Grammar of Graphics |
| GGUM | Generalized Graded Unfolding Model |
| ggupset | Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots |
| ggvenn | Draw Venn Diagram by 'ggplot2' |
| ggVennDiagram | A 'ggplot2' Implement of Venn Diagram |
| ggversa | Graficas Versatiles Con 'ggplot2' |
| ggview | 'ggplot2' Picture Previewer |
| ggvis | Interactive Grammar of Graphics |
| ggvolcano | Publication-Ready Volcano Plots |
| ggwordcloud | A Word Cloud Geom for 'ggplot2' |
| ggx | A Natural Language Interface to 'ggplot2' |
| gh | 'GitHub' 'API' |
| GHap | Genome-Wide Haplotyping |
| ghapps | Authenticate as a 'GitHub' App |
| Ghat | Quantifying Evolution and Selection on Complex Traits |
| ghclass | Tools for Managing Classes on GitHub |
| ghcm | Functional Conditional Independence Testing with the GHCM |
| ghibli | Studio Ghibli Colour Palettes |
| Ghost | Missing Data Segments Imputation in Multivariate Streams |
| GhostKnockoff | The Knockoff Inference Using Summary Statistics |
| ghql | General Purpose 'GraphQL' Client |
| GHS | Graphical Horseshoe MCMC Sampler Using Data Augmented Block Gibbs Sampler |
| ghyp | Generalized Hyperbolic Distribution and Its Special Cases |
| ghypernet | Fit and Simulate Generalised Hypergeometric Ensembles of Graphs |
| giacR | Interface to the Computer Algebra System 'Giac' |
| GiANT | Gene Set Uncertainty in Enrichment Analysis |
| gibasa | An Alternative 'Rcpp' Wrapper of 'MeCab' |
| gibble | Geometry Decomposition |
| GIC | A General Iterative Clustering Algorithm |
| gie | API Wrapper for the Natural Gas Transparency Platforms of Gas Infrastructure Europe |
| gif | Graphical Independence Filtering |
| Gifi | Multivariate Analysis with Optimal Scaling |
| gifski | Highest Quality GIF Encoder |
| GIFT | Access to the Global Inventory of Floras and Traits (GIFT) |
| gifti | Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information |
| GIFTr | GIFT Questions Format Generator from Dataframes |
| gigg | Group Inverse-Gamma Gamma Shrinkage for Sparse Regression with Grouping Structure |
| GIGrvg | Random Variate Generator for the GIG Distribution |
| GillespieSSA | Gillespie's Stochastic Simulation Algorithm (SSA) |
| GillespieSSA2 | Gillespie's Stochastic Simulation Algorithm for Impatient People |
| gim | Generalized Integration Model |
| gimme | Group Iterative Multiple Model Estimation |
| GIMMEgVAR | Group Iterative Multiple Model Estimation with 'graphicalVAR' |
| GimmeMyPlot | Graphical Utilities for Visualizing and Exploring Data |
| gimmeTools | Supplemental Tools for the 'gimme' R Package |
| gimms | Download and Process GIMMS NDVI3g Data |
| GiNA | High Throughput Phenotyping |
| Gini | Gini Coefficient |
| GiniDecompLY | Gini Decomposition by Income Sources |
| GiniDistance | A New Gini Correlation Between Quantitative and Qualitative Variables |
| giniVarCI | Gini Indices, Variances and Confidence Intervals for Finite and Infinite Populations |
| ginormal | Generalized Inverse Normal Distribution Density and Generation |
| GInSARCorW | GACOS InSAR Correction Workflow |
| gIPFrm | Generalized Iterative Proportional Fitting for Relational Models |
| GIplot | Gaussian Interval Plot (GIplot) |
| gips | Gaussian Model Invariant by Permutation Symmetry |
| GiRaF | Gibbs Random Fields Analysis |
| giscoR | Download Map Data from GISCO API - Eurostat |
| GISINTEGRATION | GIS Integration |
| GISSB | Network Analysis on the Norwegian Road Network |
| GISTools | Further Capabilities in Geographic Information Science |
| gistr | Work with 'GitHub' 'Gists' |
| git2r | Provides Access to Git Repositories |
| git2rdata | Store and Retrieve Data.frames in a Git Repository |
| git4r | Interactive Git for R |
| gitcreds | Query 'git' Credentials from 'R' |
| gitdown | Turn Your Git Commit Messages into a HTML Book |
| gitear | Client to the 'gitea' API |
| gitgadget | 'Rstudio' Addin for Version Control and Assignment Management using Git |
| gitGPT | Automated Git Commit Messages using the 'OpenAI' 'GPT' Model |
| githubinstall | A Helpful Way to Install R Packages Hosted on GitHub |
| githubr | Easier to Use API Wrapper for 'GitHub' |
| gitignore | Create Useful .gitignore Files for your Project |
| gitlabr | Access to the 'GitLab' API |
| gitlink | Add 'Git' Links to Your Web Based Assets |
| gitr | A Lightweight API for 'Git' |
| GitStats | Standardized Git Repository Data |
| gittargets | Data Version Control for the Targets Package |
| givitiR | The GiViTI Calibration Test and Belt |
| gjam | Generalized Joint Attribute Modeling |
| gJLS2 | A Generalized Joint Location and Scale Framework for Association Testing |
| GJRM | Generalised Joint Regression Modelling |
| gk | g-and-k and g-and-h Distribution Functions |
| GK2011 | Gaines and Kuklinski (2011) Estimators for Hybrid Experiments |
| gkgraphR | Accessing the Official 'Google Knowledge Graph' API |
| gkmSVM | Gapped-Kmer Support Vector Machine |
| gKRLS | Generalized Kernel Regularized Least Squares |
| glam | Generalized Additive and Linear Models (GLAM) |
| glamlasso | Penalization in Large Scale Generalized Linear Array Models |
| glarma | Generalized Linear Autoregressive Moving Average Models |
| Glarmadillo | Solve the Graphical Lasso Problem with 'Armadillo' |
| GlarmaVarSel | Variable Selection in Sparse GLARMA Models |
| glassdoor | Interface to 'Glassdoor' API |
| glasso | Graphical Lasso: Estimation of Gaussian Graphical Models |
| glassoFast | Fast Graphical LASSO |
| glba | General Linear Ballistic Accumulator Models |
| glca | An R Package for Multiple-Group Latent Class Analysis |
| glcm | Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs) |
| GLCMTextures | GLCM Textures of Raster Layers |
| gld | Estimation and Use of the Generalised (Tukey) Lambda Distribution |
| GLDEX | Fitting Single and Mixture of Generalised Lambda Distributions |
| GLDreg | Fit GLD Regression/Quantile/AFT Model to Data |
| gldrm | Generalized Linear Density Ratio Models |
| glinternet | Learning Interactions via Hierarchical Group-Lasso Regularization |
| glinvci | Phylogenetic Comparative Methods with Uncertainty Estimates |
| gllm | Generalised log-Linear Model |
| gllvm | Generalized Linear Latent Variable Models |
| glm.deploy | 'C' and 'Java' Source Code Generator for Fitted Glm Objects |
| glm.predict | Predicted Values and Discrete Changes for Regression Models |
| glm2 | Fitting Generalized Linear Models |
| GLMaSPU | An Adaptive Test on High Dimensional Parameters in Generalized Linear Models |
| glmbb | All Hierarchical or Graphical Models for Generalized Linear Model |
| glmc | Fitting Generalized Linear Models Subject to Constraints |
| GLMcat | Generalized Linear Models for Categorical Responses |
| glme | Generalized Linear Mixed Effects Models |
| glmertree | Generalized Linear Mixed Model Trees |
| glmglrt | GLRT P-Values in Generalized Linear Models |
| glmlep | Fit GLM with LEP-Based Penalized Maximum Likelihood |
| glmm | Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation |
| glmm.hp | Hierarchical Partitioning of Marginal R2 for Generalized Mixed-Effect Models |
| GLMMadaptive | Generalized Linear Mixed Models using Adaptive Gaussian Quadrature |
| GLMMcosinor | Fit a Cosinor Model Using a Generalized Mixed Modeling Framework |
| glmmEP | Generalized Linear Mixed Model Analysis via Expectation Propagation |
| glmmfields | Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling |
| glmMisrep | Generalized Linear Models Adjusting for Misrepresentation |
| glmmLasso | Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation |
| glmmML | Generalized Linear Models with Clustering |
| glmmPen | High Dimensional Penalized Generalized Linear Mixed Models (pGLMM) |
| glmmrBase | Generalised Linear Mixed Models in R |
| glmmrOptim | Approximate Optimal Experimental Designs Using Generalised Linear Mixed Models |
| GLMMRR | Generalized Linear Mixed Model (GLMM) for Binary Randomized Response Data |
| GLMMselect | Bayesian Model Selection for Generalized Linear Mixed Models |
| glmmSeq | General Linear Mixed Models for Gene-Level Differential Expression |
| glmmTMB | Generalized Linear Mixed Models using Template Model Builder |
| glmnet | Lasso and Elastic-Net Regularized Generalized Linear Models |
| glmnetcr | Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response |
| glmnetr | Nested Cross Validation for the Relaxed Lasso and Other Machine Learning Models |
| glmnetSE | Add Nonparametric Bootstrap SE to 'glmnet' for Selected Coefficients (No Shrinkage) |
| glmnetUtils | Utilities for 'Glmnet' |
| GLMpack | Data and Code to Accompany Generalized Linear Models, 2nd Edition |
| glmpath | L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model |
| glmpathcr | Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response |
| glmpca | Dimension Reduction of Non-Normally Distributed Data |
| glmpermu | Permutation-Based Inference for Generalized Linear Models |
| GLMsData | Generalized Linear Model Data Sets |
| GlmSimulatoR | Creates Ideal Data for Generalized Linear Models |
| glmtlp | Generalized Linear Models with Truncated Lasso Penalty |
| glmtoolbox | Set of Tools to Data Analysis using Generalized Linear Models |
| glmtrans | Transfer Learning under Regularized Generalized Linear Models |
| glmtree | Logistic Regression Trees |
| glmulti | Model Selection and Multimodel Inference Made Easy |
| glmvsd | Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models |
| glmx | Generalized Linear Models Extended |
| glmxdiag | A Collection of Graphic Tools for GLM Diagnostics and some Extensions |
| globalKinhom | Inhomogeneous K- And Pair Correlation Functions Using Global Estimators |
| GlobalOptions | Generate Functions to Get or Set Global Options |
| globalOptTests | Objective functions for benchmarking the performance of global optimization algorithms |
| globals | Identify Global Objects in R Expressions |
| globaltrends | Download and Measure Global Trends Through Google Search Volumes |
| globe | Plot 2D and 3D Views of the Earth, Including Major Coastline |
| glober | Estimating Functions with Multivariate B-Splines |
| glogis | Fitting and Testing Generalized Logistic Distributions |
| glossa | User-Friendly 'shiny' App for Bayesian Species Distribution Models |
| glossary | Glossaries for Markdown and Quarto Documents |
| glossr | Use Interlinear Glosses in R Markdown |
| glottospace | Language Mapping and Geospatial Analysis of Linguistic and Cultural Data |
| glow | Make Plots that Glow |
| glpkAPI | R Interface to C API of GLPK |
| gLRTH | Genome-Wide Association and Linkage Analysis under Heterogeneity |
| GLSME | Generalized Least Squares with Measurement Error |
| glue | Interpreted String Literals |
| gluedown | Wrap Vectors in Markdown Formatting |
| gluvarpro | Glucose Variability Measures from Continuous Glucose Monitoring Data |
| glvmfit | Methods to Assess Generalized Latent Variable Model Fit |
| glycanr | Tools for Analysing N-Glycan Data |
| gm | Create Music with Ease |
| gma | Granger Mediation Analysis |
| GMAC | Genomic Mediation Analysis with Adaptive Confounding Adjustment |
| gmailr | Access the 'Gmail' 'RESTful' API |
| gmapsdistance | Distance and Travel Time Between Two Points from Google Maps |
| GMCM | Fast Estimation of Gaussian Mixture Copula Models |
| gMCP | Graph Based Multiple Comparison Procedures |
| gMCPLite | Lightweight Graph Based Multiple Comparison Procedures |
| gmDatabase | Accessing a Geometallurgical Database with R |
| GMDH | Short Term Forecasting via GMDH-Type Neural Network Algorithms |
| GMDH2 | Binary Classification via GMDH-Type Neural Network Algorithms |
| GMDHreg | Regression using GMDH Algorithms |
| Gmedian | Geometric Median, k-Medians Clustering and Robust Median PCA |
| gmfamm | Generalized Multivariate Functional Additive Models |
| gmfd | Inference and Clustering of Functional Data |
| gmGeostats | Geostatistics for Compositional Analysis |
| gmgm | Gaussian Mixture Graphical Model Learning and Inference |
| Gmisc | Descriptive Statistics, Transition Plots, and More |
| GMKMcharlie | Unsupervised Gaussian Mixture and Minkowski and Spherical K-Means with Constraints |
| gmm | Generalized Method of Moments and Generalized Empirical Likelihood |
| GMMAT | Generalized Linear Mixed Model Association Tests |
| GMMBoost | Likelihood-Based Boosting for Generalized Mixed Models |
| gmmsslm | Semi-Supervised Gaussian Mixture Model with a Missing-Data Mechanism |
| gmnl | Multinomial Logit Models with Random Parameters |
| gmodels | Various R Programming Tools for Model Fitting |
| gMOIP | Tools for 2D and 3D Plots of Single and Multi-Objective Linear/Integer Programming Models |
| GmooG | Datasets for the Book 'Getting (more out of) Graphics' |
| gmoTree | Get and Modify 'oTree' Data |
| gmp | Multiple Precision Arithmetic |
| gmpoly | Multivariate Polynomials with Rational Coefficients |
| GMPro | Graph Matching with Degree Profiles |
| GmptzCurve | Gompertz Curve Fitting |
| gmresls | Solve Least Squares with GMRES(k) |
| gms | 'GAMS' Modularization Support Package |
| GMSE | Generalised Management Strategy Evaluation Simulator |
| GMSimpute | Generalized Mass Spectrum Missing Peaks Abundance Imputation |
| gmt | Interface Between GMT Map-Making Software and R |
| gmtFD | General Multiple Tests for Univariate and Multivariate Functional Data |
| gmvarkit | Estimate Gaussian and Student's t Mixture Vector Autoregressive Models |
| gmvjoint | Joint Models of Survival and Multivariate Longitudinal Data |
| gmwmx | Estimate Functional and Stochastic Parameters of Linear Models with Correlated Residuals |
| gMWT | Generalized Mann-Whitney Type Tests |
| GNAR | Methods for Fitting Network Time Series Models |
| GNE | Computation of Generalized Nash Equilibria |
| gnFit | Goodness of Fit Test for Continuous Distribution Functions |
| gnlm | Generalized Nonlinear Regression Models |
| gnm | Generalized Nonlinear Models |
| gnn | Generative Neural Networks |
| gnomonicM | Estimate Natural Mortality for Different Life Stages |
| gnonadd | Various Non-Additive Models for Genetic Associations |
| gnorm | Generalized Normal/Exponential Power Distribution |
| gnrprod | Estimates Gross Output Functions |
| GNRS | Access the 'Geographic Name Resolution Service' |
| GNSSseg | Homogenization of GNSS Series |
| gnumeric | Read Data from Files Readable by 'gnumeric' |
| go2bigq | Convert Large Numbers to Bigq Format |
| goalp | Weighted and Lexicographic Goal Programming Interface |
| goat | Gene Set Analysis Using the Gene Set Ordinal Association Test |
| GOCompare | Comprehensive GO Terms Comparison Between Species |
| goeveg | Functions for Community Data and Ordinations |
| gofar | Generalized Co-Sparse Factor Regression |
| gofcat | Goodness-of-Fit Measures for Categorical Response Models |
| GofCens | Goodness-of-Fit Methods for Complete and Right-Censored Data |
| gofCopula | Goodness-of-Fit Tests for Copulae |
| gofedf | Goodness of Fit Tests Based on Empirical Distribution Functions |
| goffda | Goodness-of-Fit Tests for Functional Data |
| gofgamma | Goodness-of-Fit Tests for the Gamma Distribution |
| gofIG | Goodness-of-Fit Tests for the Inverse Gaussian Distribution |
| GoFKernel | Testing Goodness-of-Fit with the Kernel Density Estimator |
| GofKmt | Khmaladze Martingale Transformation Goodness-of-Fit Test |
| gofreg | Bootstrap-Based Goodness-of-Fit Tests for Parametric Regression |
| GOFShiny | Interactive Document for Working with Goodness of Fit Analysis |
| goft | Tests of Fit for some Probability Distributions |
| goftest | Classical Goodness-of-Fit Tests for Univariate Distributions |
| gogarch | Generalized Orthogonal GARCH (GO-GARCH) Models |
| goldfish | Statistical Network Models for Dynamic Network Data |
| golem | A Framework for Robust Shiny Applications |
| gomms | GLM-Based Ordination Method |
| GomoGomonoMi | Animate Text using the 'Animate.css' Library |
| gompertztrunc | Conducting Maximum Likelihood Estimation with Truncated Mortality Data |
| gontr | Dataset for 'GOxploreR' |
| GoodFibes | Detection and Reconstruction of Muscle Fibers from diceCT Image Data |
| GoodFitSBM | Monte Carlo Goodness-of-Fit Tests for Stochastic Block Models |
| GoodmanKruskal | Association Analysis for Categorical Variables |
| goodpractice | Advice on R Package Building |
| Goodreader | Scrape and Analyze 'Goodreads' Book Data |
| googleadsR | Access to 'Google Ads' via the 'Windsor.ai' API |
| googleAnalyticsR | Google Analytics API into R |
| googleAuthR | Authenticate and Create Google APIs |
| googleCloudRunner | R Scripts in the Google Cloud via Cloud Run, Cloud Build and Cloud Scheduler |
| googleCloudStorageR | Interface with Google Cloud Storage API |
| googleCloudVisionR | Access to the 'Google Cloud Vision' API for Image Recognition, OCR and Labeling |
| googleComputeEngineR | R Interface with Google Compute Engine |
| googledrive | An Interface to Google Drive |
| googleErrorReportingR | Send Error Reports to the Google Error Reporting Service API |
| GoogleImage2Array | Create Array Data from 2D Image Thumbnails via Google Image Search |
| GoogleKnowledgeGraphR | Retrieve Information from 'Google Knowledge Graph' API |
| googleLanguageR | Call Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API |
| googlenlp | An Interface to Google's Cloud Natural Language API |
| googlePolylines | Encoding Coordinates into 'Google' Polylines |
| googlePublicData | Working with Google's 'Public Data Explorer' DSPL Metadata Files |
| googlePubsubR | R Interface for Google 'Cloud Pub/Sub' REST API |
| googler | Google from the R Console |
| googlesheets4 | Access Google Sheets using the Sheets API V4 |
| googleTagManageR | Access the 'Google Tag Manager' API using R |
| googletraffic | Google Traffic |
| googleVis | R Interface to Google Charts |
| googleway | Accesses Google Maps APIs to Retrieve Data and Plot Maps |
| GOplot | Visualization of Functional Analysis Data |
| gor | Algorithms for the Subject Graphs and Network Optimization |
| GORCure | Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data |
| goric | Generalized Order-Restricted Information Criterion |
| gorica | Evaluation of Inequality Constrained Hypotheses Using GORICA |
| gosset | Tools for Data Analysis in Experimental Agriculture |
| gotop | Scroll Back to Top Icon in Shiny and R Markdown |
| govdown | GOV.UK Style Templates for R Markdown |
| governor | Speed Limiter to Control Rate of Execution of Loops |
| govinfoR | A 'GovInfo' API Wrapper |
| govStatJPN | functions to get public survey data in Japan |
| gower | Gower's Distance |
| goweragreement | Bayesian Gower Agreement for Categorical Data |
| GOxploreR | Structural Exploration of the Gene Ontology (GO) Knowledge Base |
| goxygen | In-Code Documentation for 'GAMS' |
| gp | Maximum Likelihood Estimation of the Generalized Poisson Distribution |
| gpairs | The Generalized Pairs Plot |
| GPareto | Gaussian Processes for Pareto Front Estimation and Optimization |
| GPArotateDF | Derivative Free Gradient Projection Factor Rotation |
| GPArotation | Gradient Projection Factor Rotation |
| GPBayes | Tools for Gaussian Process Modeling in Uncertainty Quantification |
| gpboost | Combining Tree-Boosting with Gaussian Process and Mixed Effects Models |
| gpbStat | Comprehensive Statistical Analysis of Plant Breeding Experiments |
| GPCERF | Gaussian Processes for Estimating Causal Exposure Response Curves |
| GPCMlasso | Differential Item Functioning in Generalized Partial Credit Models |
| gpcp | Genomic Prediction of Cross Performance |
| GPCsign | Gaussian Process Classification as Described in Bachoc et al. (2020) |
| GPEMR | Growth Parameter Estimation Method |
| GPFDA | Gaussian Process for Functional Data Analysis |
| GPfit | Gaussian Processes Modeling |
| gpg | GNU Privacy Guard for R |
| GPGame | Solving Complex Game Problems using Gaussian Processes |
| GpGp | Fast Gaussian Process Computation Using Vecchia's Approximation |
| GPIC | Quantifying Group Performance in Individual Competitions |
| gpindex | Generalized Price and Quantity Indexes |
| gpk | 100 Data Sets for Statistics Education |
| gpkg | Utilities for the Open Geospatial Consortium 'GeoPackage' Format |
| GPL2025 | Convert Chip ID of the GPL2015 into GeneBank Accession and ENTREZID |
| gplite | General Purpose Gaussian Process Modelling |
| gplm | Generalized Partial Linear Models (GPLM) |
| gplots | Various R Programming Tools for Plotting Data |
| gplsim | Spline Estimation for GPLSIM |
| GPLTR | Generalized Partially Linear Tree-Based Regression Model |
| GPM | Gaussian Process Modeling of Multi-Response and Possibly Noisy Datasets |
| gpmap | Analysing and Plotting Genotype-Phenotype Maps |
| GPoM | Generalized Polynomial Modelling |
| GPP | Gaussian Process Projection |
| GPRMortality | Gaussian Process Regression for Mortality Rates |
| gProfileR | Interface to the 'g:Profiler' Toolkit |
| gprofiler2 | Interface to the 'g:Profiler' Toolset |
| gps | General P-Splines |
| gps.track | GPS Track Point Information Extractor |
| GPSCDF | Generalized Propensity Score Cumulative Distribution Function |
| GPSeqClus | Sequential Clustering Algorithm for Location Data |
| gptoolsStan | Gaussian Processes on Graphs and Lattices in 'Stan' |
| gptr | A Convenient R Interface with the OpenAI 'ChatGPT' API |
| GPTreeO | Dividing Local Gaussian Processes for Online Learning Regression |
| gptstudio | Use Large Language Models Directly in your Development Environment |
| gptzeror | Identify Text Written by Large Language Models using 'GPTZero' |
| GPUmatrix | Basic Linear Algebra with GPU |
| gpuR | GPU Functions for R Objects |
| GPvam | Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling |
| GPvecchia | Scalable Gaussian-Process Approximations |
| gpx | Process GPX Files into R Data Structures |
| gqlr | 'GraphQL' Server in R |
| gquad | Prediction of G Quadruplexes and Other Non-B DNA Motifs |
| grabsampling | Probability of Detection for Grab Sample Selection |
| GrabSVG | Granularity-Based Spatially Variable Genes Identifications |
| Grace | Graph-Constrained Estimation and Hypothesis Tests |
| grade | Binary Grading functions for R |
| gradeR | Helps Grade Assignment Submissions that are R Scripts |
| graDiEnt | Stochastic Quasi-Gradient Differential Evolution Optimization |
| gradientPickerD3 | Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker' |
| grafify | Easy Graphs for Data Visualisation and Linear Models for ANOVA |
| grafzahl | Supervised Machine Learning for Textual Data Using Transformers and 'Quanteda' |
| gRain | Bayesian Networks |
| grainscape | Landscape Connectivity, Habitat, and Protected Area Networks |
| gramEvol | Grammatical Evolution for R |
| GramQuad | Gram Quadrature |
| grand | Guidelines for Reporting About Network Data |
| grandR | Comprehensive Analysis of Nucleotide Conversion Sequencing Data |
| grangers | Inference on Granger-Causality in the Frequency Domain |
| granova | Graphical Analysis of Variance |
| granovaGG | Graphical Analysis of Variance Using ggplot2 |
| grantham | Calculate the Grantham Distance |
| GRAPE | Gene-Ranking Analysis of Pathway Expression |
| grapes | Make Binary Operators |
| grapesAgri1 | Collection of Shiny Apps for Agricultural Research Data Analysis |
| graph3d | A Wrapper of the JavaScript Library 'vis-graph3d' |
| graph4lg | Build Graphs for Landscape Genetics Analysis |
| graphclust | Hierarchical Graph Clustering for a Collection of Networks |
| GrapheR | A Multi-Platform GUI for Drawing Customizable Graphs in R |
| grapherator | A Modular Multi-Step Graph Generator |
| graphframes | Interface for 'GraphFrames' |
| graphhopper | An R Interface to the 'GraphHopper' Directions API |
| graphicalEvidence | Graphical Evidence |
| graphicalExtremes | Statistical Methodology for Graphical Extreme Value Models |
| graphicalMCP | Graphical Multiple Comparison Procedures |
| graphicalVAR | Graphical VAR for Experience Sampling Data |
| graphkernels | Graph Kernels |
| graphlayouts | Additional Layout Algorithms for Network Visualizations |
| graphon | A Collection of Graphon Estimation Methods |
| graphPAF | Estimating and Displaying Population Attributable Fractions |
| graphql | A GraphQL Query Parser |
| graphsim | Simulate Expression Data from 'igraph' Networks |
| graphTweets | Visualise Twitter Interactions |
| graposas | Graphical Approach Optimal Sample Size |
| grateful | Facilitate Citation of R Packages |
| grates | Grouped Date Classes |
| gratia | Graceful 'ggplot'-Based Graphics and Other Functions for GAMs Fitted Using 'mgcv' |
| graticule | Meridional and Parallel Lines for Maps |
| gratis | Generating Time Series with Diverse and Controllable Characteristics |
| grattan | Australian Tax Policy Analysis |
| grattanInflators | Inflators for Australian Policy Analysis |
| gRaven | Bayes Nets: 'RHugin' Emulation with 'gRain' |
| gravitas | Explore Probability Distributions for Bivariate Temporal Granularities |
| gravity | Estimation Methods for Gravity Models |
| gravmagsubs | Gravitational and Magnetic Attraction of 3-D Vertical Rectangular Prisms |
| gRbase | A Package for Graphical Modelling in R |
| gRc | Inference in Graphical Gaussian Models with Edge and Vertex Symmetries |
| GRCdata | Parameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data |
| GRCdesigns | Generalized Row-Column Designs |
| GRCRegression | Modified Poisson Regression of Grouped and Right-Censored Counts |
| greatR | Gene Registration from Expression and Time-Courses in R |
| grec | Gradient-Based Recognition of Spatial Patterns in Environmental Data |
| greed | Clustering and Model Selection with the Integrated Classification Likelihood |
| GreedyEPL | Greedy Expected Posterior Loss |
| GreedyExperimentalDesign | Greedy Experimental Design Construction |
| GreedyExperimentalDesignJARs | GreedyExperimentalDesign JARs |
| greekLetters | Routines for Writing Greek Letters and Mathematical Symbols on the 'RStudio' and 'RGui' |
| greeks | Sensitivities of Prices of Financial Options and Implied Volatilities |
| greenclust | Combine Categories Using Greenacre's Method |
| greencrab.toolkit | Run 'Stan' Models to Interpret Green Crab Monitoring Assessments |
| GREENeR | Geospatial Regression Equation for European Nutrient Losses (GREEN) |
| greenfeedr | Process and Report 'GreenFeed' Data |
| Greg | Regression Helper Functions |
| GregoryQuadrature | Gregory Weights for Function Integration |
| gregRy | GREGORY Estimation |
| GRelevance | Graph-Based k-Sample Comparisons and Relevance Analysis in High Dimensions |
| gremlin | Mixed-Effects REML Incorporating Generalized Inverses |
| GREMLINS | Generalized Multipartite Networks |
| greport | Graphical Reporting for Clinical Trials |
| greta | Simple and Scalable Statistical Modelling in R |
| greta.dynamics | Modelling Structured Dynamical Systems in 'greta' |
| greta.gp | Gaussian Process Modelling in 'greta' |
| gretel | Generalized Path Analysis for Social Networks |
| gretlR | A Seamless Integration of 'Gretl' and 'R' |
| grex | Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data |
| greybox | Toolbox for Model Building and Forecasting |
| GreyModel | Fitting and Forecasting of Grey Model |
| Greymodels | Shiny App for Grey Forecasting Model |
| GreyZones | Detection of Grey Zones in Two-Way Inter-Rater Agreement Tables |
| grf | Generalized Random Forests |
| GrFA | Group Factor Analysis |
| gridBase | Integration of base and grid graphics |
| gridBezier | Bezier Curves in 'grid' |
| GRIDCOPULA | Bivariate Copula Functions Based on Regular Grid |
| gridDebug | Debugging 'grid' Graphics |
| gridExtra | Miscellaneous Functions for "Grid" Graphics |
| gridGeometry | Polygon Geometry in 'grid' |
| gridGraphics | Redraw Base Graphics Using 'grid' Graphics |
| gridGraphviz | Drawing Graphs with 'grid' |
| GridOnClusters | Cluster-Preserving Multivariate Joint Grid Discretization |
| gridOT | Approximate Optimal Transport Between Two-Dimensional Grids |
| gridpattern | 'grid' Pattern Grobs |
| gridsampler | A Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies |
| gridstackeR | Wrapper for 'gridstack.js' |
| gridSVG | Export 'grid' Graphics as SVG |
| gridtext | Improved Text Rendering Support for 'Grid' Graphics |
| gRim | Graphical Interaction Models |
| grImport | Importing Vector Graphics |
| grImport2 | Importing 'SVG' Graphics |
| GrimR | Calculate Optical Parameters from Spindle Stage Measurements |
| GRIN2 | Genomic Random Interval (GRIN) |
| gripp | General Inverse Problem Platform |
| grizbayr | Bayesian Inference for A|B and Bandit Marketing Tests |
| grmsem | Genetic-Relationship-Matrix Structural Equation Modelling (GRMSEM) |
| grnn | General regression neural network |
| GRNNs | General Regression Neural Networks Package |
| GROAN | Genomic Regression Workbench |
| grobblR | Creating Flexible, Reproducible 'PDF' Reports |
| groc | Generalized Regression on Orthogonal Components |
| gromovlab | Gromov-Hausdorff Type Distances for Labeled Metric Spaces |
| groqR | A Coding Assistant using the Fast AI Inference 'Groq' |
| groundhog | Version-Control for CRAN, GitHub, and GitLab Packages |
| GroupBN | Inferring Group Bayesian Networks using Hierarchical Feature Clustering |
| GroupComparisons | Paired/Unpaired Parametric/Non-Parametric Group Comparisons |
| groupdata2 | Creating Groups from Data |
| groupedSurv | Efficient Estimation of Grouped Survival Models Using the Exact Likelihood Function |
| Grouphmap | 'Grouphmap' is an Automated One-Step Common Analysis of Batch Expression Profile |
| groupICA | Independent Component Analysis for Grouped Data |
| groupr | Groups with Inapplicable Values |
| grouprar | Group Response Adaptive Randomization for Clinical Trials |
| GroupSeq | Group Sequential Design Probabilities - With Graphical User Interface |
| GroupTest | Multiple Testing Procedure for Grouped Hypotheses |
| groupTesting | Simulating and Modeling Group (Pooled) Testing Data |
| groupwalk | Implement the Group Walk Algorithm |
| groupWQS | Grouped Weighted Quantile Sum Regression |
| grove | Wavelet Functional ANOVA Through Markov Groves |
| growfunctions | Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data |
| growR | Implementation of the Vegetation Model ModVege |
| growth | Multivariate Normal and Elliptically-Contoured Repeated Measurements Models |
| growthcleanr | Data Cleaner for Anthropometric Measurements |
| growthcurver | Simple Metrics to Summarize Growth Curves |
| growthmodels | Nonlinear Growth Models |
| growthPheno | Functional Analysis of Phenotypic Growth Data to Smooth and Extract Traits |
| growthrate | Bayesian reconstruction of growth velocity |
| growthrates | Estimate Growth Rates from Experimental Data |
| grpCox | Penalized Cox Model for High-Dimensional Data with Grouped Predictors |
| grPipe | Graphviz Pipeline Plot Based on Grids (grPipe: Graphviz Pipeline) |
| grplasso | Fitting User-Specified Models with Group Lasso Penalty |
| grpnet | Group Elastic Net Regularized GLMs and GAMs |
| grpreg | Regularization Paths for Regression Models with Grouped Covariates |
| grpsel | Group Subset Selection |
| grpseq | Group Sequential Analysis of Clinical Trials |
| grpSLOPE | Group Sorted L1 Penalized Estimation |
| GrpString | Patterns and Statistical Differences Between Two Groups of Strings |
| grr | Alternative Implementations of Base R Functions |
| GRS.test | GRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation |
| GRShiny | Graded Response Model |
| GRSxE | Testing Gene-Environment Interactions Through Genetic Risk Scores |
| grt | General Recognition Theory |
| GRTo | Tools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes |
| grwat | River Hydrograph Separation and Analysis |
| GSA | Gene Set Analysis |
| GSA.UN | Global Sensitivity Analysis Tool |
| GSAfisherCombined | Gene Set Analysis with Fisher Combined Method |
| gsalib | Utility Functions for 'GATK' |
| GSAQ | Gene Set Analysis with QTL |
| gsarima | Two Functions for Generalized SARIMA Time Series Simulation |
| gsbDesign | Group Sequential Bayes Design |
| gsbm | Estimate Parameters in the Generalized SBM |
| gscaLCA | Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression |
| gscounts | Group Sequential Designs with Negative Binomial Outcomes |
| gscramble | Simulating Admixed Genotypes Without Replacement |
| GSD | Graph Signal Decomposition |
| GSDA | Gene Set Distance Analysis (GSDA) |
| gsDesign | Group Sequential Design |
| gsDesign2 | Group Sequential Design with Non-Constant Effect |
| GSE | Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data |
| gsEasy | Gene Set Enrichment Analysis in R |
| GseaVis | Implement for 'GSEA' Enrichment Visualization |
| GSED | Group Sequential Enrichment Design |
| gSeg | Graph-Based Change-Point Detection (g-Segmentation) |
| GSelection | Genomic Selection |
| GSEMA | Gene Set Enrichment Meta-Analysis |
| gsheet | Download Google Sheets Using Just the URL |
| gsignal | Signal Processing |
| gsisdecoder | High Efficient Functions to Decode NFL Player IDs |
| gsl | Wrapper for the Gnu Scientific Library |
| gslnls | GSL Multi-Start Nonlinear Least-Squares Fitting |
| gsloid | Global Sea Level and Oxygen Isotope Data |
| GSM | Gamma Shape Mixture |
| gsMAMS | Group Sequential Designs of Multi-Arm Multi-Stage Trials |
| gsmoothr | Smoothing tools |
| GSMX | Multivariate Genomic Selection |
| GSODR | Global Surface Summary of the Day ('GSOD') Weather Data Client |
| gson | Base Class and Methods for 'gson' Format |
| GSparO | Group Sparse Optimization |
| gspcr | Generalized Supervised Principal Component Regression |
| gsrs | A Group-Specific Recommendation System |
| gsrsb | Group Sequential Refined Secondary Boundary |
| gss | General Smoothing Splines |
| GSSE | Genotype-Specific Survival Estimation |
| GSSTDA | Progression Analysis of Disease with Survival using Topological Data Analysis |
| gstar | Generalized Space-Time Autoregressive Model |
| gstat | Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation |
| gStream | Graph-Based Sequential Change-Point Detection for Streaming Data |
| gstsm | Generalized Spatial-Time Sequence Miner |
| gsubfn | Utilities for Strings and Function Arguments |
| gsw | Gibbs Sea Water Functions |
| GsymPoint | Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests |
| gsynth | Generalized Synthetic Control Method |
| gt | Easily Create Presentation-Ready Display Tables |
| gt4ireval | Generalizability Theory for Information Retrieval Evaluation |
| gtable | Arrange 'Grobs' in Tables |
| GTbasedIM | Game Theory-Based Influence Measures |
| GTDL | The Generalized Time-Dependent Logistic Family |
| gte | Generalized Turnbull's Estimator |
| gTests | Graph-Based Two-Sample Tests |
| gTestsMulti | New Graph-Based Multi-Sample Tests |
| gtexr | Query the GTEx Portal API |
| gtExtras | Extending 'gt' for Beautiful HTML Tables |
| gtexture | Generalized Application of Co-Occurrence Matrices and Haralick Texture |
| gtfs2gps | Converting Transport Data from GTFS Format to GPS-Like Records |
| gtfsio | Read and Write General Transit Feed Specification (GTFS) Files |
| gtfsrouter | Routing with 'GTFS' (General Transit Feed Specification) Data |
| gtfstools | General Transit Feed Specification (GTFS) Editing and Analysing Tools |
| GTFSwizard | Exploring and Manipulating 'GTFS' Files |
| gtheory | Apply Generalizability Theory with R |
| gto | Insert 'gt' Tables into Word Documents |
| gtools | Various R Programming Tools |
| gtranslate | Translate Between Different Languages |
| gtreg | Regulatory Tables for Clinical Research |
| gtrendsR | Perform and Display Google Trends Queries |
| gtsummary | Presentation-Ready Data Summary and Analytic Result Tables |
| gtWAS | Genome and Transcriptome Wide Association Study |
| guaguas | Nombres Inscritos en Chile (1920 - 2021) |
| guardianapi | Access 'The Guardian' Newspaper Open Data API |
| GUD | Bayesian Modal Regression Based on the GUD Family |
| Guerry | Maps, Data and Methods Related to Guerry (1833) "Moral Statistics of France" |
| guescini | Real-Time PCR Data Sets by Guescini et al. (2008) |
| guess | Adjust Estimates of Learning for Guessing |
| GUEST | Graphical Models in Ultrahigh-Dimensional and Error-Prone Data via Boosting Algorithm |
| guidedPLS | Supervised Dimensional Reduction by Guided Partial Least Squares |
| guildai | Track Machine Learning Experiments |
| GUILDS | Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure |
| guiplot | User-Friendly GUI Plotting Tools |
| GUIProfiler | Graphical User Interface for Rprof() |
| guix.install | Install R Packages with GNU Guix |
| gumbel | The Gumbel-Hougaard Copula |
| gumboot | Bootstrap Analyses of Sampling Uncertainty in Goodness-of-Fit Statistics |
| GUniFrac | Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis |
| gunit | Converts Conductance Units |
| gunsales | Statistical Analysis of Monthly Background Checks of Gun Purchases |
| gustave | A User-Oriented Statistical Toolkit for Analytical Variance Estimation |
| gutenbergr | Download and Process Public Domain Works from Project Gutenberg |
| GUTS | Fast Calculation of the Likelihood of a Stochastic Survival Model |
| GVARX | Perform Global Vector Autoregression Estimation and Inference |
| gvc | Global Value Chains Tools |
| gvcR | Genotypic Variance Components |
| gvlma | Global Validation of Linear Models Assumptions |
| GWalkR | Interactive Exploratory Data Analysis Tool |
| gwaRs | Manhattan, Q-Q, and PCA Plots using 'ggplot2' |
| GWASbyCluster | Identifying Significant SNPs in Genome Wide Association Studies (GWAS) via Clustering |
| GWASExactHW | Exact Hardy-Weinburg Testing for Genome Wide Association Studies |
| gwasforest | Make Forest Plot with GWAS Data |
| GWASinlps | Non-Local Prior Based Iterative Variable Selection Tool for Genome-Wide Association Studies |
| GWASinspector | Comprehensive and Easy to Use Quality Control of GWAS Results |
| gwasrapidd | 'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog |
| gwavr | Get Water Attributes Visually in R |
| gwbr | Local and Global Beta Regression |
| GWEX | Multi-Site Stochastic Models for Daily Precipitation and Temperature |
| GWI | Count and Continuous Generalized Variability Indexes |
| gwid | Genome-Wide Identity-by-Descent |
| gWidgets2 | Rewrite of gWidgets API for Simplified GUI Construction |
| gWidgets2tcltk | Toolkit Implementation of gWidgets2 for tcltk |
| GWLelast | Geographically Weighted Logistic Elastic Net Regression |
| GWmodel | Geographically-Weighted Models |
| GWnnegPCA | Geographically Weighted Non-Negative Principal Components Analysis |
| GWpcor | Geographically Weighted Partial Correlation Coefficient |
| gwpcormapper | Geographically Weighted Partial Correlation Mapper |
| gWQS | Generalized Weighted Quantile Sum Regression |
| GWRLASSO | A Hybrid Model for Spatial Prediction Through Local Regression |
| GWRM | Generalized Waring Regression Model for Count Data |
| gwrpvr | Genome-Wide Regression P-Value (Gwrpv) |
| gwrr | Fits Geographically Weighted Regression Models with Diagnostic Tools |
| GWSDAT | GroundWater Spatiotemporal Data Analysis Tool (GWSDAT) |
| GWsignif | Estimating Genome-Wide Significance for Whole Genome Sequencing Studies, Either Single SNP Tests or Region-Based Tests |
| gwzinbr | Geographically Weighted Zero Inflated Negative Binomial Regression |
| GxEprs | Genotype-by-Environment Interaction in Polygenic Score Models |
| GxEScanR | Run GWAS/GWEIS Scans Using Binary Dosage Files |
| gym | Provides Access to the OpenAI Gym API |
| gyro | Hyperbolic Geometry |
| h0 | A Robust Bayesian Meta-Analysis for Estimating the Hubble Constant via Time Delay Cosmography |
| h2o | R Interface for the 'H2O' Scalable Machine Learning Platform |
| h2o4gpu | Interface to 'H2O4GPU' |
| h2otools | Machine Learning Model Evaluation for 'h2o' Package |
| H2x2Factorial | Sample Size Calculation in Hierarchical 2x2 Factorial Trials |
| h3jsr | Access Uber's H3 Library |
| h3lib | Exposes the 'Uber' 'H3' Library to R Packages |
| h3r | Hexagonal Hierarchical Geospatial Indexing System |
| haarfisz | Software to Perform Haar Fisz Transforms |
| habCluster | Detecting Spatial Clustering Based on Connection Cost Between Grids |
| hablar | Non-Astonishing Results in R |
| habtools | Tools and Metrics for 3D Surfaces and Objects |
| HAC | Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC) |
| hackeRnews | Wrapper for the 'Official Hacker News' API |
| hacksaw | Additional Tools for Splitting and Cleaning Data |
| hacksig | A Tidy Framework to Hack Gene Expression Signatures |
| HACSim | Iterative Extrapolation of Species' Haplotype Accumulation Curves for Genetic Diversity Assessment |
| HadamardR | Hadamard Matrix Generation |
| HaDeX | Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data |
| HadIBDs | Incomplete Block Designs using Hadamard Matrix (HadIBDs) |
| hagis | Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity |
| hahmmr | Haplotype-Aware Hidden Markov Model for RNA |
| hakaiApi | Authenticated HTTP Request Client for the 'Hakai' API |
| hal9001 | The Scalable Highly Adaptive Lasso |
| haldensify | Highly Adaptive Lasso Conditional Density Estimation |
| halfcircle | Plot Halfcircle Diagram |
| halfmoon | Techniques to Build Better Balance |
| halk | Methods to Create Hierarchical Age Length Keys for Age Assignment |
| hamlet | Hierarchical Optimal Matching and Machine Learning Toolbox |
| handcodeR | Text Annotation App |
| handlr | Convert Among Citation Formats |
| HandTill2001 | Multiple Class Area under ROC Curve |
| handwriter | Handwriting Analysis in R |
| handwriterApp | A 'shiny' Application for Handwriting Analysis |
| handwriterRF | Handwriting Analysis with Random Forests |
| handyFunctions | Useful Functions for Handfully Manipulating and Analyzing Data with Data.frame Format |
| handyplots | Handy Plots |
| hans | Haversines are not Slow |
| HanStat | Package for Easy Interpretation of Statistical Methods |
| hapassoc | Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm |
| Hapi | Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells |
| Haplin | Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes |
| haplo.ccs | Estimate Haplotype Relative Risks in Case-Control Data |
| haplo.stats | Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous |
| HaploCatcher | A Predictive Haplotyping Package |
| haploR | Query 'HaploReg', 'RegulomeDB' |
| HaploSim | Functions to Simulate Haplotypes |
| haplotyper | Tool for Clustering Genotypes in Haplotypes |
| haplotypes | Manipulating DNA Sequences and Estimating Unambiguous Haplotype Network with Statistical Parsimony |
| happign | R Interface to 'IGN' Web Services |
| happytime | Two Games to Relieve the Boredom |
| hapsim | Haplotype Data Simulation |
| harbinger | A Unified Time Series Event Detection Framework |
| hardhat | Construct Modeling Packages |
| HardyWeinberg | Statistical Tests and Graphics for Hardy-Weinberg Equilibrium |
| harmonicmeanp | Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood |
| harmonizer | Harmonizing CN8 and PC8 Product Codes |
| harmony | Fast, Sensitive, and Accurate Integration of Single Cell Data |
| harmonydata | R Library for 'Harmony' |
| harrietr | Wrangle Phylogenetic Distance Matrices and Other Utilities |
| harrypotter | Palettes Generated from All "Harry Potter" Movies |
| Harvest.Tree | Harvest the Classification Tree |
| hash | Full Featured Implementation of Hash Tables/Associative Arrays/Dictionaries |
| hashids | Generate Short Unique YouTube-Like IDs (Hashes) from Integers |
| hashr | Hash R Objects to Integers Fast |
| Hassani.SACF | Computing Lower Bound of Ljung-Box Test |
| Hassani.Silva | A Test for Comparing the Predictive Accuracy of Two Sets of Forecasts |
| hasseDiagram | Drawing Hasse Diagram |
| haven | Import and Export 'SPSS', 'Stata' and 'SAS' Files |
| hawkes | Hawkes process simulation and calibration toolkit |
| hawkesbow | Estimation of Hawkes Processes from Binned Observations |
| HazardDiff | Conditional Treatment Effect for Competing Risks |
| hazer | Identifying Foggy and Cloudy Images by Quantifying Haziness |
| hbal | Hierarchically Regularized Entropy Balancing |
| hbamr | Hierarchical Bayesian Aldrich-McKelvey Scaling via 'Stan' |
| hBayesDM | Hierarchical Bayesian Modeling of Decision-Making Tasks |
| hbbr | Hierarchical Bayesian Benefit-Risk Assessment Using Discrete Choice Experiment |
| hbim | Hill/Bliss Independence Model for Combination Vaccines |
| hbmem | Hierarchical Bayesian Analysis of Recognition Memory |
| hbsae | Hierarchical Bayesian Small Area Estimation |
| HBSTM | Hierarchical Bayesian Space-Time Models for Gaussian Space-Time Data |
| HBV.IANIGLA | Modular Hydrological Model |
| hcandersenr | H.C. Andersens Fairy Tales |
| hcci | Interval Estimation of Linear Models with Heteroskedasticity |
| HCD | Hierarchical Community Detection by Recursive Partitioning |
| hce | Design and Analysis of Hierarchical Composite Endpoints |
| hchinamap | Mapping China and Its Provinces |
| hcidata | HCI Datasets |
| hclust1d | Hierarchical Clustering of Univariate (1d) Data |
| hclusteasy | Determining Hierarchical Clustering Easily |
| HCmodelSets | Regression with a Large Number of Potential Explanatory Variables |
| HCR | Causal Discovery from Discrete Data using Hidden Compact Representation |
| HCT | Calculates Significance Criteria and Power for a Single Arm Trial |
| HCTDesign | Group Sequential Design for Historical Control Trial with Survival Outcome |
| HCTR | Higher Criticism Tuned Regression |
| hctrial | Using Historical Controls for Designing Phase II Clinical Trials |
| hda | Heteroscedastic Discriminant Analysis |
| HDANOVA | High-Dimensional Analysis of Variance |
| hdar | 'REST' API Client for Accessing Data on 'WEkEO HDA V2' |
| hdbayes | Bayesian Analysis of Generalized Linear Models with Historical Data |
| hdbcp | Bayesian Change Point Detection for High-Dimensional Data |
| hdbinseg | Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation |
| hdbm | High Dimensional Bayesian Mediation Analysis |
| hdbma | Bayesian Mediation Analysis with High-Dimensional Data |
| HDBRR | High Dimensional Bayesian Ridge Regression without MCMC |
| hdcate | Estimation of Conditional Average Treatment Effects with High-Dimensional Data |
| HDCD | High-Dimensional Changepoint Detection |
| HDCI | High Dimensional Confidence Interval Based on Lasso and Bootstrap |
| HDclassif | High Dimensional Supervised Classification and Clustering |
| HDclust | Clustering High Dimensional Data with Hidden Markov Model on Variable Blocks |
| HDcpDetect | Detect Change Points in Means of High Dimensional Data |
| hdcuremodels | Penalized Mixture Cure Models for High-Dimensional Data |
| HDCurves | Hierarchical Derivative Curve Estimation |
| hdd | Easy Manipulation of Out of Memory Data Sets |
| HDDesign | Sample Size Calculation for High Dimensional Classification Study |
| hddplot | Use Known Groups in High-Dimensional Data to Derive Scores for Plots |
| hdf5r | Interface to the 'HDF5' Binary Data Format |
| hdf5r.Extra | Extensions for 'HDF5' R Interfaces |
| hdflex | High-Dimensional Aggregate Density Forecasts |
| hdfqlr | Interface to 'HDFql' API |
| HDGLM | Tests for High Dimensional Generalized Linear Models |
| hdi | High-Dimensional Inference |
| hdImpute | A Batch Process for High Dimensional Imputation |
| HDInterval | Highest (Posterior) Density Intervals |
| HDiR | Directional Highest Density Regions |
| hdiVAR | Statistical Inference for Noisy Vector Autoregression |
| HDJM | Penalized High-Dimensional Joint Model |
| HDLSSkST | Distribution-Free Exact High Dimensional Low Sample Size k-Sample Tests |
| hdm | High-Dimensional Metrics |
| HDMAADMM | ADMM for High-Dimensional Mediation Models |
| hdme | High-Dimensional Regression with Measurement Error |
| hdmed | Methods for Mediation Analysis with High-Dimensional Mediators |
| HDMFA | High-Dimensional Matrix Factor Analysis |
| HDMT | A Multiple Testing Procedure for High-Dimensional Mediation Hypotheses |
| hdnom | Benchmarking and Visualization Toolkit for Penalized Cox Models |
| HDNRA | High-Dimensional Location Testing with Normal-Reference Approaches |
| HDOMDesign | High-Dimensional Orthogonal Maximin Distance Designs |
| HDoutliers | Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers |
| hdpca | Principal Component Analysis in High-Dimensional Data |
| hdpGLM | Hierarchical Dirichlet Process Generalized Linear Models |
| hdrcde | Highest Density Regions and Conditional Density Estimation |
| HDRFA | High-Dimensional Robust Factor Analysis |
| hds | Hazard Discrimination Summary |
| HDShOP | High-Dimensional Shrinkage Optimal Portfolios |
| HDSinRdata | Data for the 'Mastering Health Data Science Using R' Online Textbook |
| HDSpatialScan | Multivariate and Functional Spatial Scan Statistics |
| HDStIM | High Dimensional Stimulation Immune Mapping ('HDStIM') |
| HDTSA | High Dimensional Time Series Analysis Tools |
| HDtweedie | The Lasso for Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm |
| HDXBoxeR | Analysis of Hydrogen-Deuterium Exchange Mass-Spectrometry Data |
| headliner | Compose Sentences to Describe Comparisons |
| healthatlas | Explore and Import 'Metopio' Health Atlas Data and Spatial Layers |
| HealthCal | Health Calculator |
| healthcare.antitrust | Healthcare Antitrust Analysis |
| healthdb | Working with Healthcare Databases |
| healthequal | Compute Summary Measures of Health Inequality |
| healthfinance | Financial Projections and Planning for Health Care Practices |
| healthyAddress | Convert Addresses to Standard Inputs |
| healthyR | Hospital Data Analysis Workflow Tools |
| healthyR.ai | The Machine Learning and AI Modeling Companion to 'healthyR' |
| healthyR.data | Data Only Package to 'healthyR' |
| healthyR.ts | The Time Series Modeling Companion to 'healthyR' |
| healthyverse | Easily Install and Load the 'healthyverse' |
| heapsofpapers | Easily Download Heaps of PDF and CSV Files |
| heatex | Heat exchange calculations during physical activity |
| heatmap3 | An Improved Heatmap Package |
| heatmapFit | Fit Statistic for Binary Dependent Variable Models |
| heatmapFlex | Tools to Generate Flexible Heatmaps |
| heatmaply | Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2' |
| heatwaveR | Detect Heatwaves and Cold-Spells |
| heck | Highly Performant String Case Converter |
| HeckmanEM | Fit Normal, Student-t or Contaminated Normal Heckman Selection Models |
| heckmanGE | Estimation and Inference for Heckman Selection Models with Cluster-Robust Variance |
| HEDA | 'Hydropeaking Events Detection Algorithm' |
| heddlr | Dynamic R Markdown Document Generation |
| hedgedrf | An Implementation of the Hedged Random Forest Algorithm |
| hedgehog | Property-Based Testing |
| heemod | Markov Models for Health Economic Evaluations |
| heimdall | Drift Adaptable Models |
| heims | Decode and Validate HEIMS Data from Department of Education, Australia |
| heiscore | Score and Plot the Healthy Eating Index from NHANES Data |
| helixvis | Visualize Alpha-Helical Peptide Sequences |
| HellCor | The Hellinger Correlation |
| hellno | Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()' |
| helloJavaWorld | Hello Java World |
| hellorust | Minimal Examples of Using Rust Code in R |
| HelpersMG | Tools for Environmental Analyses, Ecotoxicology and Various R Functions |
| helsinki | R Tools for Helsinki Open Data |
| HEMDAG | Hierarchical Ensemble Methods for Directed Acyclic Graphs |
| hemispheR | Processing Hemispherical Canopy Images |
| heplots | Visualizing Hypothesis Tests in Multivariate Linear Models |
| here | A Simpler Way to Find Your Files |
| hereR | 'sf'-Based Interface to the 'HERE' REST APIs |
| heritability | Marker-Based Estimation of Heritability Using Individual Plant or Plot Data |
| HeritSeq | Heritability of Gene Expression for Next-Generation Sequencing |
| hermite | Generalized Hermite Distribution |
| hermiter | Efficient Sequential and Batch Estimation of Univariate and Bivariate Probability Density Functions and Cumulative Distribution Functions along with Quantiles (Univariate) and Nonparametric Correlation (Bivariate) |
| hero | Spatio-Temporal (Hero) Sandwich Smoother |
| hesim | Health Economic Simulation Modeling and Decision Analysis |
| HeterFunctionalData | Test of No Main and/or Interaction Effects in Functional Data |
| heterocop | Semi-Parametric Estimation with Gaussian Copula |
| heterogen | Spatial Functions for Heterogeneity and Climate Variability |
| HeteroGGM | Gaussian Graphical Model-Based Heterogeneity Analysis |
| heterometa | Convert Various Meta-Analysis Heterogeneity Measures |
| heteromixgm | Copula Graphical Models for Heterogeneous Mixed Data |
| hetGP | Heteroskedastic Gaussian Process Modeling and Design under Replication |
| HEtools | Homomorphic Encryption Polynomials |
| HETOP | MLE and Bayesian Estimation of Heteroskedastic Ordered Probit (HETOP) Model |
| hetsurr | Assessing Heterogeneity in the Utility of a Surrogate Marker |
| hetsurrSurv | Assessing Heterogeneity in Surrogacy Using Censored Data |
| hett | Heteroscedastic t-Regression |
| hettest | Testing for a Treatment Effect Using a Heterogeneous Surrogate Marker |
| hettreatreg | Heterogeneous Treatment Effects in Regression Analysis |
| hettx | Fisherian and Neymanian Methods for Detecting and Measuring Treatment Effect Variation |
| hetu | Structural Handling of Finnish Personal Identity Codes |
| heumilkr | Heuristic Capacitated Vehicle Routing Problem Solver |
| heuristica | Heuristics Including Take the Best and Unit-Weight Linear |
| heuristicsmineR | Discovery of Process Models with the Heuristics Miner |
| hexbin | Hexagonal Binning Routines |
| hexDensity | Fast Kernel Density Estimation with Hexagonal Grid |
| hexfont | 'GNU Unifont' Hex Fonts |
| hexSticker | Create Hexagon Sticker in R |
| HextractoR | Integrated Tool for Hairping Extraction of RNA Sequences |
| hextri | Hexbin Plots with Triangles |
| hexView | Viewing Binary Files |
| hfhub | Hugging Face Hub Interface |
| hflights | Flights that departed Houston in 2011 |
| hfr | Estimate Hierarchical Feature Regression Models |
| hglasso | Learning Graphical Models with Hubs |
| hglm | Hierarchical Generalized Linear Models |
| hglm.data | Data for the 'hglm' Package |
| hgm | Holonomic Gradient Method and Gradient Descent |
| HGMND | Heterogeneous Graphical Model for Non-Negative Data |
| hgnc | Download and Import the HUGO Gene Nomenclature Committee ('HGNC') Data Set into R |
| HGNChelper | Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols |
| HGraph | Use Graph Structure to Travel |
| HGSL | Heterogeneous Group Square-Root Lasso |
| hgutils | Collection of Utility Functions |
| hgwrr | Hierarchical and Geographically Weighted Regression |
| HH | Statistical Analysis and Data Display: Heiberger and Holland |
| hhh4contacts | Age-Structured Spatio-Temporal Models for Infectious Disease Counts |
| hhi | Calculate and Visualize the Herfindahl-Hirschman Index |
| HhP | Hierarchical Heterogeneity Analysis via Penalization |
| hhsmm | Hidden Hybrid Markov/Semi-Markov Model Fitting |
| hht | The Hilbert-Huang Transform: Tools and Methods |
| hibayes | Individual-Level, Summary-Level and Single-Step Bayesian Regression Model |
| HiClimR | Hierarchical Climate Regionalization |
| hicp | Harmonised Index of Consumer Prices |
| hiddenf | The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity |
| HiddenMarkov | Hidden Markov Models |
| hidecan | Create HIDECAN Plots for Visualising Genome-Wide Association Studies and Differential Expression Results |
| HiDimDA | High Dimensional Discriminant Analysis |
| hidradenitis | Calculate Clinical Scores for Hidradenitis Suppurativa (HS), a Dermatologic Disease |
| hierarchicalSets | Set Data Visualization Using Hierarchies |
| hierBipartite | Bipartite Graph-Based Hierarchical Clustering |
| hierfstat | Estimation and Tests of Hierarchical F-Statistics |
| hierNet | A Lasso for Hierarchical Interactions |
| HierPortfolios | Hierarchical Risk Clustering Portfolio Allocation Strategies |
| hierSDR | Hierarchical Sufficient Dimension Reduction |
| HiGarrote | Nonnegative Garrote Method Incorporating Hierarchical Relationships |
| highcharter | A Wrapper for the 'Highcharts' Library |
| highd2means | High-Dimensional Tests for Two Population Mean Vectors |
| highDmean | Testing Two-Sample Mean in High Dimension |
| HighestMedianRules | Implementation of Voting Rules Electing the Candidate with Highest Median Grade |
| highfrequency | Tools for Highfrequency Data Analysis |
| highlight | Syntax Highlighter |
| highlighter | Code Syntax Highlighting using the 'Prism.js' Library |
| highlightHTML | Highlight HTML Text and Tables |
| highlightr | Highlight Conserved Edits Across Versions of a Document |
| highmean | Two-Sample Tests for High-Dimensional Mean Vectors |
| highMLR | Feature Selection for High Dimensional Survival Data |
| highOrderPortfolios | Design of High-Order Portfolios Including Skewness and Kurtosis |
| highr | Syntax Highlighting for R Source Code |
| highriskzone | Determining and Evaluating High-Risk Zones |
| highs | 'HiGHS' Optimization Solver |
| hightR | HIGHT Algorithm |
| highTtest | Simultaneous Critical Values for t-Tests in Very High Dimensions |
| higlasso | Hierarchical Integrative Group LASSO |
| higrad | Statistical Inference for Online Learning and Stochastic Approximation via HiGrad |
| hilbert | Coordinate Indexing on Hilbert Curves |
| hilbertSimilarity | Hilbert Similarity Index for High Dimensional Data |
| hildareadR | Extract Variables from HILDA |
| hilldiv | Integral Analysis of Diversity Based on Hill Numbers |
| hillR | Diversity Through Hill Numbers |
| hillshader | Create Hillshade Relief Maps Using Ray-Tracing |
| HIMA | High-Dimensional Mediation Analysis |
| himach | High Mach Finds Routes for Supersonic Aircraft |
| hindex | Simulating the Development of h-Index Values |
| hindexcalculator | H-Index Calculator using Data from a Web of Science (WoS) Citation Report |
| hint | Tools for Hypothesis Testing Based on Hypergeometric Intersection Distributions |
| hiphop | Parentage Assignment using Bi-Allelic Genetic Markers |
| hippie | Hippie Code Completion in 'RStudio' |
| hipread | Read Hierarchical Fixed Width Files |
| HiResTEC | Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data |
| hIRT | Hierarchical Item Response Theory Models |
| hisse | Hidden State Speciation and Extinction |
| HistDat | Summary Statistics for Histogram/Count Data |
| HistData | Data Sets from the History of Statistics and Data Visualization |
| HistDAWass | Histogram-Valued Data Analysis |
| histmdl | A Most Informative Histogram-Like Model |
| histogram | Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins |
| historicalborrow | Non-Longitudinal Bayesian Historical Borrowing Models |
| historicalborrowlong | Longitudinal Bayesian Historical Borrowing Models |
| historydata | Data Sets for Historians |
| histoslider | A Histogram Slider Input for 'Shiny' |
| hitandrun | "Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes |
| hivdata | Six-Year Chronological Data of HIV and ART Cases in Pakistan |
| hive | Hadoop InteractiVE |
| HiveR | 2D and 3D Hive Plots for R |
| hJAM | Hierarchical Joint Analysis of Marginal Summary Statistics |
| HK80 | Conversion Tools for HK80 Geographical Coordinate System |
| hkdatasets | Datasets Related to Hong Kong |
| hkevp | Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012) |
| HKRbook | Apps and Data for the Book "Introduction to Statistics" |
| hlaR | Tools for HLA Data |
| HLAtools | Toolkit for HLA Immunogenomics |
| hlidacr | Access Data from the 'Hlídač Státu' API |
| HLMdiag | Diagnostic Tools for Hierarchical (Multilevel) Linear Models |
| hlt | Higher-Order Item Response Theory |
| HMB | Hierarchical Model-Based Estimation Approach |
| HMC | High Dimensional Mean Comparison with Projection and Cross-Fitting |
| hmcdm | Hidden Markov Cognitive Diagnosis Models for Learning |
| hmclearn | Fit Statistical Models Using Hamiltonian Monte Carlo |
| HMDHFDplus | Read Human Mortality Database and Human Fertility Database Data from the Web |
| hmeasure | The H-Measure and Other Scalar Classification Performance Metrics |
| hmer | History Matching and Emulation Package |
| Hmisc | Harrell Miscellaneous |
| hmix | Hidden Markov Model for Predicting Time Sequences with Mixture Sampling |
| HMM | Hidden Markov Models |
| hmm.discnp | Hidden Markov Models with Discrete Non-Parametric Observation Distributions |
| HMMcopula | Markov Regime Switching Copula Models Estimation and Goodness-of-Fit |
| HMMEsolver | A Fast Solver for Henderson Mixed Model Equation via Row Operations |
| HMMextra0s | Hidden Markov Models with Extra Zeros |
| hmmm | Hierarchical Multinomial Marginal Models |
| HMMmlselect | Determine the Number of States in Hidden Markov Models via Marginal Likelihood |
| HMMpa | Analysing Accelerometer Data Using Hidden Markov Models |
| hmmr | "Mixture and Hidden Markov Models with R" Datasets and Example Code |
| HMMRel | Hidden Markov Models for Reliability and Maintenance |
| hmmTMB | Fit Hidden Markov Models using Template Model Builder |
| HMP | Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP |
| HMPTrees | Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data |
| HMR | Flux Estimation with Static Chamber Data |
| hms | Pretty Time of Day |
| Hmsc | Hierarchical Model of Species Communities |
| hmsidwR | Health Metrics and the Spread of Infectious Diseases |
| hmsr | Multipopulation Evolutionary Strategy HMS |
| hmstimer | 'hms' Based Timer |
| HMTL | Heterogeneous Multi-Task Feature Learning |
| hNMF | Hierarchical Non-Negative Matrix Factorization |
| hnp | Half-Normal Plots with Simulation Envelopes |
| hoardeR | Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices |
| hoardr | Manage Cached Files |
| HOasso | Higher Order Assortativity for Complex Networks |
| hockeystick | Download and Visualize Essential Climate Change Data |
| HodgesTools | Common Use Tools for Genomic Analysis |
| holi | Higher Order Likelihood Inference Web Applications |
| holiglm | Holistic Generalized Linear Models |
| holland | Statistics for Holland's Theory of Vocational Choice |
| hollr | Chat Completion and Text Annotation with Local and OpenAI Models |
| holobiont | Microbiome Analysis Tools |
| holodeck | A Tidy Interface for Simulating Multivariate Data |
| Holomics | An User-Friendly R 'shiny' Application for Multi-Omics Data Integration and Analysis |
| homals | Gifi Methods for Optimal Scaling |
| Homeric | Doughnut Plots |
| hommel | Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method |
| homnormal | Tests of Homogeneity of Variances |
| homologene | Quick Access to Homologene and Gene Annotation Updates |
| homomorpheR | Homomorphic Computations in R |
| HomomorphicEncryption | BFV, BGV, CKKS Schema for Fully Homomorphic Encryption |
| HonestDiD | Robust Inference in Difference-in-Differences and Event Study Designs |
| hoopR | Access Men's Basketball Play by Play Data |
| hopbyhop | Transmissions and Receptions in a Hop by Hop Network |
| hopit | Hierarchical Ordered Probit Models with Application to Reporting Heterogeneity |
| hopkins | Calculate Hopkins Statistic for Clustering |
| HoRM | Supplemental Functions and Datasets for "Handbook of Regression Methods" |
| hornpa | Horn's (1965) Test to Determine the Number of Components/Factors |
| horseshoe | Implementation of the Horseshoe Prior |
| horseshoenlm | Nonlinear Regression using Horseshoe Prior |
| hosm | High Order Spatial Matrix |
| HospitalNetwork | Building Networks of Hospitals Through Patients Transfers |
| hospitals | Portuguese 'NHS' Hospitals |
| hot.deck | Multiple Hot Deck Imputation |
| Hotelling | Hotelling's T^2 Test and Variants |
| HotellingEllipse | Hotelling’s T-Squared Statistic and Ellipse |
| hotspot | Software Hotspot Analysis |
| hotspots | Hot Spots |
| housingData | U.S. Housing Data from 2008 to 2016 |
| hover | CSS Animations for 'shiny' Button Elements |
| howler | 'Shiny' Extension of 'howler.js' |
| howManyImputations | Calculate How many Imputations are Needed for Multiple Imputation |
| howzatR | Useful Functions for Cricket Analysis |
| hpa | Distributions Hermite Polynomial Approximation |
| hpackedbubble | Create Split Packed Bubble Charts |
| hpcwld | High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion |
| hpfilter | The One- And Two-Sided Hodrick-Prescott Filter |
| hpiR | House Price Indexes |
| HPLB | High-Probability Lower Bounds for the Total Variance Distance |
| HQM | Superefficient Estimation of Future Conditional Hazards Based on Marker Information |
| hqmisc | Miscellaneous Convenience Functions and Dataset |
| hqreg | Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression |
| hR | Toolkit for Data Analytics in Human Resources |
| hrbrthemes | Additional Themes, Theme Components and Utilities for 'ggplot2' |
| hrcomprisk | Nonparametric Assessment Between Competing Risks Hazard Ratios |
| hrqglas | Group Variable Selection for Quantile and Robust Mean Regression |
| hrt | Heteroskedasticity Robust Testing |
| hrtlFMC | Half Replicate of Two Level Factorial Run Order with Minimum Level Changes |
| HRW | Datasets, Functions and Scripts for Semiparametric Regression Supporting Harezlak, Ruppert & Wand (2018) |
| HSAUR | A Handbook of Statistical Analyses Using R (1st Edition) |
| HSAUR2 | A Handbook of Statistical Analyses Using R (2nd Edition) |
| HSAUR3 | A Handbook of Statistical Analyses Using R (3rd Edition) |
| hscovar | Calculation of Covariance Between Markers for Half-Sib Families |
| HSDiC | Homogeneity and Sparsity Detection Incorporating Prior Constraint Information |
| hSDM | Hierarchical Bayesian Species Distribution Models |
| hse | The hse Distribution |
| hsem | Hierarchical Structural Equation Model |
| hset | Sets of Numbers Implemented with Hash Tables |
| HSEtest | Homogeneity of Stratum Effects Test |
| hsphase | Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data |
| hspm | Heterogeneous Spatial Models |
| HSPOR | Hidden Smooth Polynomial Regression for Rupture Detection |
| hsrecombi | Estimation of Recombination Rate and Maternal LD in Half-Sibs |
| hsstan | Hierarchical Shrinkage Stan Models for Biomarker Selection |
| hstats | Interaction Statistics |
| htestClust | Reweighted Marginal Hypothesis Tests for Clustered Data |
| htetree | Causal Inference with Tree-Based Machine Learning Algorithms |
| HTLR | Bayesian Logistic Regression with Heavy-Tailed Priors |
| htm2txt | Convert Html into Text |
| html2R | Convert 'HTML' to 'R' with a 'Shiny' App |
| html5 | Creates Valid HTML5 Strings |
| htmldf | Simple Scraping and Tidy Webpage Summaries |
| htmlreportR | 'HTML' Reporting Made Simple(R) |
| htmlTable | Advanced Tables for Markdown/HTML |
| htmltools | Tools for HTML |
| HTMLUtils | Facilitates Automated HTML Report Creation |
| htmlwidgets | HTML Widgets for R |
| htrSPRanalysis | Analysis of Surface Plasmon Resonance Data |
| HTRX | Haplotype Trend Regression with eXtra Flexibility (HTRX) |
| hts | Hierarchical and Grouped Time Series |
| HTSCluster | Clustering High-Throughput Transcriptome Sequencing (HTS) Data |
| HTSeed | Fitting of Hydrotime Model for Seed Germination Time Course |
| htsr | Hydro-Meteorology Time-Series |
| HTT | Hypothesis Testing Tree |
| httk | High-Throughput Toxicokinetics |
| httpcache | Query Cache for HTTP Clients |
| httpcode | 'HTTP' Status Code Helper |
| httpgd | A 'HTTP' Server Graphics Device |
| httping | 'Ping' 'URLs' to Time 'Requests' |
| httpproblems | Report Errors in Web Applications with 'Problem Details' (RFC 7807) |
| httpRequest | Basic HTTP Request |
| httptest | A Test Environment for HTTP Requests |
| httptest2 | Test Helpers for 'httr2' |
| httpuv | HTTP and WebSocket Server Library |
| httr | Tools for Working with URLs and HTTP |
| httr2 | Perform HTTP Requests and Process the Responses |
| hubeau | Get Data from the French National Database on Water 'Hub'Eau' |
| hubEnsembles | Ensemble Methods for Combining Hub Model Outputs |
| hubUtils | Core 'hubverse' Utilities |
| hudr | Providing Data from the US Department of Housing and Urban Development |
| hues | Distinct Colour Palettes Based on 'iwanthue' |
| huge | High-Dimensional Undirected Graph Estimation |
| huito | Reproducible and Flexible Label Design |
| HUM | Compute HUM Value and Visualize ROC Curves |
| humanFormat | Human-Friendly Formatting Functions |
| humaniformat | A Parser for Human Names |
| humanize | Create Values for Human Consumption |
| humanleague | Synthetic Population Generator |
| humidity | Calculate Water Vapor Measures from Temperature and Dew Point |
| hunspell | High-Performance Stemmer, Tokenizer, and Spell Checker |
| HuraultMisc | Guillem Hurault Functions' Library |
| hurdlr | Zero-Inflated and Hurdle Modelling Using Bayesian Inference |
| HurreconR | Models Hurricane Wind Speed, Wind Direction, and Wind Damage |
| hurricaneexposure | Explore and Map County-Level Hurricane Exposure in the United States |
| hutils | Miscellaneous R Functions and Aliases |
| hutilscpp | Miscellaneous Functions in C++ |
| huxtable | Easily Create and Style Tables for LaTeX, HTML and Other Formats |
| HVT | Constructing Hierarchical Voronoi Tessellations and Overlay Heatmaps for Data Analysis |
| hwde | Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci |
| HWEintrinsic | Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem |
| hwep | Hardy-Weinberg Equilibrium in Polyploids |
| hwig | Half-Weight Index Gregariousness |
| hwordcloud | Rendering Word Clouds |
| hwriter | HTML Writer - Outputs R Objects in HTML Format |
| hwsdr | Interface to the 'HWSD' Web Services |
| hwwntest | Tests of White Noise using Wavelets |
| HybridDesign | Hybrid Design for Phase I Dose-Finding Studies |
| HybridMicrobiomes | Analysis of Host-Associated Microbiomes from Hybrid Organisms |
| hybridModels | An R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks |
| hybridogram | Function that Creates a Heat Map from Hybridization Data |
| hybridts | Hybrid Time Series Forecasting Using Error Remodeling Approach |
| hyd1d | 1d Water Level Interpolation along the Rivers Elbe and Rhine |
| hydflood | Flood Extents and Duration along the Rivers Elbe and Rhine |
| hydra | Hyperbolic Embedding |
| hydraulics | Basic Pipe and Open Channel Hydraulics |
| HYDROCAL | Hydraulic Roughness Calculator |
| HydroCode | Hydrological Codes |
| hydroDCindex | Duration Curve Hydrological Model Indexes |
| hydroEvents | Extract Event Statistics in Hydrologic Time Series |
| hydrogeo | Groundwater Data Presentation and Interpretation |
| hydroGOF | Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series |
| hydroloom | Utilities to Weave Hydrologic Fabrics |
| HydroMe | Estimating Water Retention and Infiltration Model Parameters using Experimental Data |
| hydropeak | Detect and Characterize Sub-Daily Flow Fluctuations |
| HydroPortailStats | 'HydroPortail' Statistical Functions |
| hydroroute | Trace Longitudinal Hydropeaking Waves |
| hydrostats | Hydrologic Indices for Daily Time Series Data |
| hydrotoolbox | Hydrological Tools for Handling Hydro-Meteorological Data Records |
| hydroToolkit | Hydrological Tools for Handling Hydro-Meteorological Data from Argentina and Chile |
| hydroTSM | Time Series Management and Analysis for Hydrological Modelling |
| hyfo | Hydrology and Climate Forecasting |
| HyMETT | Hydrologic Model Evaluation and Time-Series Tools |
| hyper.fit | N-Dimensional Hyperplane Fitting with Errors |
| hyper2 | The Hyperdirichlet Distribution, Mark 2 |
| hyperbolicDEA | Hyperbolic DEA Estimation |
| HyperbolicDist | The Hyperbolic Distribution |
| hypercube | Organizing Data in Hypercubes |
| HyperG | Hypergraphs in R |
| hypergate | Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry |
| hypergeo | The Gauss Hypergeometric Function |
| hypergeo2 | Generalized Hypergeometric Function with Tunable High Precision |
| HypergeoMat | Hypergeometric Function of a Matrix Argument |
| hyperoverlap | Overlap Detection in n-Dimensional Space |
| hypersampleplan | Attribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials |
| hyperSpec | Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) |
| hypervolume | High Dimensional Geometry, Set Operations, Projection, and Inference Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls |
| HYPEtools | Tools for Processing and Analyzing Files from the Hydrological Catchment Model HYPE |
| hypoRF | Random Forest Two-Sample Tests |
| hypothesis | Wrapper for 'hypothes.is' |
| hypothesisr | Wrapper for the 'Hypothes.is' Web Annotation Service |
| hypr | Hypothesis Matrix Translation |
| hypsoLoop | A Tool Used to Conduct Hypsometric Analysis of a Watershed |
| HyRiM | Multicriteria Risk Management using Zero-Sum Games with Vector-Valued Payoffs that are Probability Distributions |
| hySAINT | Hybrid Genetic and Simulated Annealing Algorithm for High Dimensional Linear Models with Interaction Effects |
| hySpc.testthat | 'testthat' Unit Test Enhancements |
| hystar | Fit the Hysteretic Threshold Autoregressive Model |
| hysteresis | Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses |
| hystReet | Get Pedestrian Frequency Data from the 'Hystreet' Project |
| hytest | Hypothesis Testing Based on Neyman-Pearson Lemma and Likelihood Ratio Test |
| i18n | Internationalization Data from the 'Unicode CLDR' in Tabular Form |
| i2extras | Functions to Work with 'incidence2' Objects |
| IAcsSPCR | Data and Functions for "An Intro. to Accept. Samp. & SPC/R" |
| iAdapt | Two-Stage Adaptive Dose-Finding Clinical Trial Design |
| iadf | Analysis of Intra Annual Density Fluctuations |
| IADT | Interaction Difference Test for Prediction Models |
| iai | Interface to 'Interpretable AI' Modules |
| ialiquor | Monthly Iowa Liquor Sales Summary |
| IALS | Iterative Alternating Least Square Estimation for Large-Dimensional Matrix Factor Model |
| iapws | Formulations of the International Association for the Properties of Water and Steam |
| IAPWS95 | Thermophysical Properties of Water and Steam |
| iAR | Irregularly Observed Autoregressive Models |
| iarm | Item Analysis in Rasch Models |
| IASD | Model Selection for Index of Asymmetry Distribution |
| IAT | Cleaning and Visualizing Implicit Association Test (IAT) Data |
| IATanalytics | Compute Effect Sizes and Reliability for Implicit Association Test (IAT) Data |
| IATScore | Scoring Algorithm for the Implicit Association Test (IAT) |
| IATscores | Implicit Association Test Scores Using Robust Statistics |
| ib | Bias Correction via Iterative Bootstrap |
| iBART | Iterative Bayesian Additive Regression Trees Descriptor Selection Method |
| ibawds | Functions and Datasets for the Data Science Course at IBAW |
| ibb | R Wrapper for Istanbul Municipality Open Data Portal |
| IBCF.MTME | Item Based Collaborative Filtering for Multi-Trait and Multi-Environment Data |
| ibd | Incomplete Block Designs |
| IBDsim | Simulation of Chromosomal Regions Shared by Family Members |
| ibdsim2 | Simulation of Chromosomal Regions Shared by Family Members |
| ibelief | Belief Function Implementation |
| IBFS | Initial Basic Feasible Solution for Transportation Problem |
| ibm | Individual Based Models in R |
| ibmAcousticR | Connect to Your 'IBM Acoustic' Data |
| ibmcraftr | Toolkits to Develop Individual-Based Models in Infectious Disease |
| ibmdbR | IBM in-Database Analytics for R |
| IBMPopSim | Individual Based Model Population Simulation |
| ibmsunburst | Generate Personality Insights Sunburst Diagrams |
| ibr | Iterative Bias Reduction |
| iBreakDown | Model Agnostic Instance Level Variable Attributions |
| IBrokers | R API to Interactive Brokers Trader Workstation |
| IBRtools | Integrating Biomarker-Based Assessments and Radarchart Creation |
| ibs | Integral of B-Spline Functions |
| iBST | Improper Bagging Survival Tree |
| ic.infer | Inequality Constrained Inference in Linear Normal Situations |
| iC10 | A Copy Number and Expression-Based Classifier for Breast Tumours |
| iC10TrainingData | Training Datasets for iC10 Package |
| ica | Independent Component Analysis |
| ical | 'iCalendar' Parsing |
| iCAMP | Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis |
| ICAMS | In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS') |
| ICAOD | Optimal Designs for Nonlinear Statistical Models by Imperialist Competitive Algorithm (ICA) |
| icardaFIGSr | Subsetting using Focused Identification of the Germplasm Strategy (FIGS) |
| iCARH | Integrative Conditional Autoregressive Horseshoe Model |
| icarus | Calibrates and Reweights Units in Samples |
| ICBioMark | Data-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers |
| ICC | Facilitating Estimation of the Intraclass Correlation Coefficient |
| ICC.Sample.Size | Calculation of Sample Size and Power for ICC |
| ICcalib | Cox Model with Interval-Censored Starting Time of a Covariate |
| iccbeta | Multilevel Model Intraclass Correlation for Slope Heterogeneity |
| ICCbin | Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data |
| iccCounts | Intraclass Correlation Coefficient for Count Data |
| iccde | Computation of the Double-Entry Intraclass Correlation |
| ICcforest | An Ensemble Method for Interval-Censored Survival Data |
| iccmult | Intracluster Correlation Coefficient (ICC) in Clustered Categorical Data |
| iccTraj | Estimates the Intraclass Correlation Coefficient for Trajectory Data |
| icd.data | International Classifcation of Diseases (ICD) Data |
| ICD10gm | Metadata Processing for the German Modification of the ICD-10 Coding System |
| icdcomorbid | Mapping ICD Codes to Comorbidity |
| icdGLM | EM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models |
| icdpicr | 'ICD' Programs for Injury Categorization in R |
| ICDS | Identification of Cancer Dysfunctional Subpathway with Omics Data |
| ICEbox | Individual Conditional Expectation Plot Toolbox |
| icecream | Print Debugging Made Sweeter |
| ICED | IntraClass Effect Decomposition |
| ICEinfer | Incremental Cost-Effectiveness Inference using Two Unbiased Samples |
| iCellR | Analyzing High-Throughput Single Cell Sequencing Data |
| icenReg | Regression Models for Interval Censored Data |
| icensBKL | Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre |
| icensmis | Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes |
| icertool | Calculate and Plot ICER |
| icesAdvice | Functions Related to ICES Advice |
| IceSat2R | ICESat-2 Altimeter Data using R |
| icesConnect | Provides User Tokens for Access to ICES Web Services |
| icesDatras | DATRAS Trawl Survey Database Web Services |
| icesDatsu | Functions to Interact with the ICES Data Submission Utility (DATSU) |
| icesDatsuQC | Run Quality Checks on Data Prior to Submission to ICES |
| icesSAG | Stock Assessment Graphs Database Web Services |
| icesSD | Stock Database Web Services |
| icesTAF | Functions to Support the ICES Transparent Assessment Framework |
| icesVocab | ICES Vocabularies Database Web Services |
| ICGE | Estimation of Number of Clusters and Identification of Atypical Units |
| ICglm | Information Criteria for Generalized Linear Regression |
| ICGOR | Fit Generalized Odds Rate Hazards Model with Interval Censored Data |
| ichimoku | Visualization and Tools for Ichimoku Kinko Hyo Strategies |
| iClick | A Button-Based GUI for Financial and Economic Data Analysis |
| icmm | Empirical Bayes Variable Selection via ICM/M Algorithm |
| icmstate | Interval Censored Multi-State Models |
| ICODS | Data Analysis for ODS and Case-Cohort Designs with Interval-Censoring |
| ICompELM | Independent Component Analysis Based Extreme Learning Machine |
| icosa | Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra |
| icpack | Survival Analysis of Interval-Censored Data |
| icpsrdata | Reproducible Data Retrieval from the ICPSR Archive |
| icr | Compute Krippendorff's Alpha |
| ICRanks | Simultaneous Confidence Intervals for Ranks |
| icRSF | A Modified Random Survival Forest Algorithm |
| ICS | Tools for Exploring Multivariate Data via ICS/ICA |
| ICSClust | Tandem Clustering with Invariant Coordinate Selection |
| ICSKAT | Interval-Censored Sequence Kernel Association Test |
| ICSNP | Tools for Multivariate Nonparametrics |
| ICSOutlier | Outlier Detection Using Invariant Coordinate Selection |
| ICSS | ICSS Algorithm by Inclan/Tiao (1994) |
| ICSShiny | ICS via a Shiny Application |
| ICSsmoothing | Data Smoothing by Interpolating Cubic Splines |
| ICsurv | Semiparametric Regression Analysis of Interval-Censored Data |
| icsw | Inverse Compliance Score Weighting |
| ICtest | Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction |
| ICV | Indirect Cross-Validation (ICV) for Kernel Density Estimation |
| ICvectorfields | Vector Fields from Spatial Time Series of Population Abundance |
| idar | Individual Diversity-Area Relationships |
| idarps | Datasets and Functions for the Class "Modelling and Data Analysis for Pharmaceutical Sciences" |
| idbr | R Interface to the US Census Bureau International Data Base API |
| IDCard | Update Chinese ID Card Number to Eighteen Digits |
| idcnrba | Interactive Application for Analyzing Representativeness and Nonresponse Bias |
| IDE | Integro-Difference Equation Spatio-Temporal Models |
| IDEAFilter | Agnostic, Idiomatic Data Filter Module for Shiny |
| ideamdb | Easy Manipulation of IDEAM's Climatological Data |
| IDEATools | Individual and Group Farm Sustainability Assessments using the IDEA4 Method |
| idefix | Efficient Designs for Discrete Choice Experiments |
| idem | Inference in Randomized Controlled Trials with Death and Missingness |
| idendr0 | Interactive Dendrograms |
| ider | Various Methods for Estimating Intrinsic Dimension |
| IDetect | Isolate-Detect Methodology for Multiple Change-Point Detection |
| IDF | Estimation and Plotting of IDF Curves |
| iDINGO | Integrative Differential Network Analysis in Genomics |
| idiogramFISH | Shiny App. Idiograms with Marks and Karyotype Indices |
| idiolect | Forensic Authorship Analysis |
| idm | Incremental Decomposition Methods |
| idmact | Interpreting Differences Between Mean ACT Scores |
| idmc | Load and Wrangle IDMC Displacement Data |
| IDmeasurer | Assessment of Individual Identity in Animal Signals |
| IDmining | Intrinsic Dimension for Data Mining |
| IDMIR | Identification of Dysregulated MiRNAs Based on MiRNA-MiRNA Interaction Network |
| idopNetwork | A Network Tool to Dissect Spatial Community Ecology |
| iDOS | Integrated Discovery of Oncogenic Signatures |
| iDOVE | Durability of Vaccine Efficacy Against SARS-CoV-2 Infection |
| IDPmisc | 'Utilities of Institute of Data Analyses and Process Design (www.zhaw.ch/idp)' |
| IDPSurvival | Imprecise Dirichlet Process for Survival Analysis |
| idr | Irreproducible Discovery Rate |
| ids | Generate Random Identifiers |
| IDSL.CSA | Composite Spectra Analysis (CSA) for High-Resolution Mass Spectrometry Analyses |
| IDSL.FSA | Fragmentation Spectra Analysis (FSA) |
| IDSL.IPA | Intrinsic Peak Analysis (IPA) for HRMS Data |
| IDSL.MXP | Parser for mzML, mzXML, and netCDF Files (Mass Spectrometry Data) |
| IDSL.NPA | Nominal Peak Analysis (NPA) |
| IDSL.SUFA | Simplified UFA |
| IDSL.UFA | United Formula Annotation (UFA) for HRMS Data Processing |
| IDSL.UFAx | Exhaustive Chemical Enumeration for United Formula Annotation |
| IDSpatialStats | Estimate Global Clustering in Infectious Disease |
| idx2r | Convert Files to and from IDX Format to Vectors, Matrices and Arrays |
| ie2misc | Irucka Embry's Miscellaneous USGS Functions |
| ie2miscdata | Irucka Embry's Miscellaneous USGS Data Collection |
| ieeeround | Functions to Set and Get the IEEE Rounding Mode |
| ieegio | File IO for Intracranial Electroencephalography |
| iemisctext | Irucka Embry's Miscellaneous Text Collection |
| IETD | Inter-Event Time Definition |
| ieugwasr | Interface to the 'OpenGWAS' Database API |
| ifaTools | Toolkit for Item Factor Analysis with 'OpenMx' |
| IFC | Tools for Imaging Flow Cytometry |
| ifCNVR | Isolation-Forest Based 'CNV' Detection from 'NGS' Data |
| ifctools | Italian Fiscal Code ('Codice Fiscale') Utilities |
| ife | Influence Function Based Estimate Objects |
| IFMCDM | Intuitionistic Fuzzy Multi-Criteria Decision Making Methods |
| ifo | Client for the Ifo Institute Time Series |
| iForecast | Machine Learning Time Series Forecasting |
| IFP | Identifying Functional Polymorphisms |
| ifpd | Indonesia Food Prices Data |
| ifs | Iterated Function Systems |
| ig.degree.betweenness | "Smith-Pittman Community Detection Algorithm for 'igraph' Objects (2024)" |
| ig.vancouver.2014.topcolour | Instagram 2014 Vancouver Top Colour Dataset |
| IgAScores | Score Taxon-Level IgA Binding in IgA-Seq Experiments |
| iGasso | Statistical Tests and Utilities for Genetic Association |
| igate | Guided Analytics for Testing Manufacturing Parameters |
| IGC.CSM | Simulate Impact of Different Urban Policies Through a General Equilibrium Model |
| IGCities | Simulate Impact of Different Urban Policies Through a General Equilibrium Model |
| igcop | Computational Tools for the IG and IGL Copula Families |
| iglu | Interpreting Glucose Data from Continuous Glucose Monitors |
| igoR | Intergovernmental Organizations Database |
| IgorR | Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data) |
| IGoRRR | A Shiny Interface for Simple Data Management |
| igr | Irish Grid Reference Utilities |
| igraph | Network Analysis and Visualization |
| igraphdata | A Collection of Network Data Sets for the 'igraph' Package |
| igraphinshiny | Use 'shiny' to Demo 'igraph' |
| iGraphMatch | Tools for Graph Matching |
| igraphtosonia | Convert iGraph graps to SoNIA .son files |
| igraphwalshdata | 'igraph' Datasets from Melanie Walsh |
| igrf | International Geomagnetic Reference Field |
| iGSEA | Integrative Gene Set Enrichment Analysis Approaches |
| IGST | Informative Gene Selection Tool |
| ihclust | Iterative Hierarchical Clustering (IHC) |
| iheatmapr | Interactive, Complex Heatmaps |
| iheiddown | For Writing Geneva Graduate Institute Documents |
| ihpdr | Download Data from the International House Price Database |
| IHSEP | Inhomogeneous Self-Exciting Process |
| iimi | Identifying Infection with Machine Intelligence |
| iIneq | Computing Individual Components of the Gini and the Theil Indices |
| IIProductionUnknown | Analyzing Data Through of Percentage of Importance Indice (Production Unknown) and Its Derivations |
| IIVpredictor | Modeling Within Individual Variability as Predictor |
| IJSE | Infinite-Jackknife-Based Standard Errors for 'brms' Models |
| ijtiff | Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files |
| ilabelled | Simple Handling of Labelled Data |
| ILS | Interlaboratory Study |
| ILSAmerge | Merge and Download International Large-Scale Assessments (ILSA) Data |
| ILSE | Linear Regression Based on 'ILSE' for Missing Data |
| ILSM | Analyze Interconnection Structure of Multilayer Interaction Networks |
| imabc | Incremental Mixture Approximate Bayesian Computation (IMABC) |
| image.binarization | Binarize Images for Enhancing Optical Character Recognition |
| image.CannyEdges | Implementation of the Canny Edge Detector for Images |
| image.ContourDetector | Implementation of the Unsupervised Smooth Contour Line Detection for Images |
| image.CornerDetectionF9 | Find Corners in Digital Images with FAST-9 |
| image.CornerDetectionHarris | Implementation of the Harris Corner Detection for Images |
| image.libfacedetection | Convolutional Neural Network for Face Detection |
| image.LineSegmentDetector | Detect Line Segments in Images |
| image.Otsu | Otsu's Image Segmentation Method |
| image.textlinedetector | Segment Images in Text Lines and Words |
| image2data | Turn Images into Data Sets |
| imageData | Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer |
| imagefluency | Image Statistics Based on Processing Fluency |
| imagefx | Extract Features from Images |
| imager | Image Processing Library Based on 'CImg' |
| imagerExtra | Extra Image Processing Library Based on 'imager' |
| imageseg | Deep Learning Models for Image Segmentation |
| imageviewer | Simple 'htmlwidgets' Image Viewer with WebGL Brightness/Contrast |
| imaginator | Simulate General Insurance Policies and Losses |
| imagine | IMAGing engINEs, Tools for Application of Image Filters to Data Matrices |
| IMak | Item Maker |
| imanr | Identify the Racial Complex of Native Corns from Mexico |
| imbalance | Preprocessing Algorithms for Imbalanced Datasets |
| imbalanceDatRel | Relocated Data Oversampling for Imbalanced Data Classification |
| imbibe | A Pipe-Friendly Image Calculator |
| imcExperiment | Mass Cytometry S4 Class Structure Pipeline for Images |
| ImCluster | Efficiency of Cluster Sampling for Crop Surveys |
| IMD | Index of Multiple Deprivation Data for the UK |
| imdbapi | Get Movie, Television Data from the 'imdb' Database |
| IMEC | Ising Model of Explanatory Coherence |
| iMediate | Likelihood Methods for Mediation Analysis |
| imf.data | An Interface to IMF (International Monetary Fund) Data JSON API |
| ImFoR | Non-Linear Height Diameter Models for Forestry |
| imgpalr | Create Color Palettes from Images |
| imgrec | An Interface for Image Recognition |
| imguR | An Imgur.com API Client Package |
| ImHD | Artificial Intelligence Based Machine Learning Algorithms for Height Diameter Relationships of Conifer Trees |
| IMIFA | Infinite Mixtures of Infinite Factor Analysers and Related Models |
| IMIX | Gaussian Mixture Model for Multi-Omics Data Integration |
| iml | Interpretable Machine Learning |
| IMmailgun | Send Emails using 'Mailgun' |
| immcp | Poly-Pharmacology Toolkit for Traditional Chinese Medicine Research |
| immer | Item Response Models for Multiple Ratings |
| Immigrate | Iterative Max-Min Entropy Margin-Maximization with Interaction Terms for Feature Selection |
| ImML | Machine Learning Algorithms Fitting and Validation for Forestry |
| immunarch | Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires |
| immunaut | Machine Learning Immunogenicity and Vaccine Response Analysis |
| immuneSIM | Tunable Simulation of B- And T-Cell Receptor Repertoires |
| Imneuron | AI Powered Neural Network Solutions for Regression Tasks |
| ImNN | Neural Networks for Predicting Volume of Forest Trees |
| imola | CSS Layouts (Grid and Flexbox) Implementation for R/Shiny |
| IMP | Interactive Model Performance Evaluation |
| imp4p | Imputation for Proteomics |
| IMPACT | The Impact of Items |
| ImpactEffectsize | Calculation and Visualization of the Impact Effect Size Measure |
| impactflu | Quantification of Population-Level Impact of Vaccination |
| impactr | Mechanical Loading Prediction Through Accelerometer Data |
| impimp | Imprecise Imputation for Statistical Matching |
| implicitExpansion | Array Operations for Arrays of Mismatching Sizes |
| implicitMeasures | Compute Scores for Different Implicit Measures |
| implied | Convert Between Bookmaker Odds and Probabilities |
| implyr | R Interface for Apache Impala |
| import | An Import Mechanism for R |
| ImportanceIndice | Analyzing Data Through of Percentage of Importance Indice and Its Derivations |
| importar | Enables Importing/Loading of Packages or Functions While Creating an Alias for Them |
| ImportExport | Import and Export Data |
| importinegi | Download and Manage Open Data from INEGI |
| imprecise101 | Introduction to Imprecise Probabilities |
| impressionist.colors | Impressionism's Color Palettes |
| imprinting | Calculate Birth Year-Specific Probabilities of Immune Imprinting to Influenza |
| ImpShrinkage | Improved Shrinkage Estimations for Multiple Linear Regression |
| imptree | Classification Trees with Imprecise Probabilities |
| imputeFin | Imputation of Financial Time Series with Missing Values and/or Outliers |
| imputeGeneric | Ease the Implementation of Imputation Methods |
| imputeLCMD | A Collection of Methods for Left-Censored Missing Data Imputation |
| ImputeLongiCovs | Longitudinal Imputation of Categorical Variables via a Joint Transition Model |
| imputeMissings | Impute Missing Values in a Predictive Context |
| imputeMulti | Imputation Methods for Multivariate Multinomial Data |
| imputeR | A General Multivariate Imputation Framework |
| imputeREE | Impute Missing Rare Earth Element Data in Zircon |
| ImputeRobust | Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape |
| imputeTestbench | Test Bench for the Comparison of Imputation Methods |
| imputeTS | Time Series Missing Value Imputation |
| iMRMC | Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics) |
| imsig | Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours |
| imt | Impact Measurement Toolkit |
| IMTest | Information Matrix Test for Generalized Partial Credit Models |
| imuf | Estimate Orientation of an Inertial Measurement Unit |
| ImVol | Volume Prediction of Trees Using Linear and Nonlinear Allometric Equations |
| in2extRemes | Into the extRemes Package |
| inaparc | Initialization Algorithms for Partitioning Cluster Analysis |
| inbreedR | Analysing Inbreeding Based on Genetic Markers |
| inca | Integer Calibration |
| incase | Pipe-Friendly Vector Replacement with Case Statements |
| INCATome | Internal Control Analysis of Translatome Studies by Microarrays |
| IncDTW | Incremental Calculation of Dynamic Time Warping |
| incgraph | Incremental Graphlet Counting for Network Optimisation |
| incidence | Compute, Handle, Plot and Model Incidence of Dated Events |
| incidence2 | Compute, Handle and Plot Incidence of Dated Events |
| IncidencePrevalence | Estimate Incidence and Prevalence using the OMOP Common Data Model |
| incidental | Implements Empirical Bayes Incidence Curves |
| incidentally | Generates Incidence Matrices and Bipartite Graphs |
| IncomPair | Comparison of Means for the Incomplete Paired Data |
| incR | Analysis of Incubation Data |
| inctools | Incidence Estimation Tools |
| incubate | Parametric Time-to-Event Analysis with Variable Incubation Phases |
| indelmiss | Insertion Deletion Analysis While Accounting for Possible Missing Data |
| independenceWeights | Estimates Weights for Confounding Control for Continuous-Valued Exposures |
| IndepTest | Nonparametric Independence Tests Based on Entropy Estimation |
| index0 | Zero-Based Indexing in R |
| IndexConstruction | Index Construction for Time Series Data |
| IndexNumber | Index Numbers in Social Sciences |
| IndexNumR | Index Number Calculation |
| indexthis | Quick Indexation |
| IndexWizard | Constructing and Analyzing Complex Selection Indices |
| IndGenErrors | Tests of Independence Between Innovations of Generalized Error Models |
| india | Influence Diagnostics in Statistical Models |
| Indicator | Composite 'Indicator' Construction and Imputation Data |
| indicspecies | Relationship Between Species and Groups of Sites |
| indiedown | Individual R Markdown Templates |
| indirect | Elicitation of Independent Conditional Means Priors for Generalised Linear Models |
| InDisc | Obtaining and Estimating Unidimensional and Multidimensional IRT Dual Models |
| IndTestPP | Tests of Independence and Analysis of Dependence Between Point Processes in Time |
| industRial | Data, Functions and Support Materials from the Book "industRial Data Science" |
| ineAtlas | Access to Spanish Household Income Distribution Atlas Data |
| inegiR | Integrate INEGI’s (Mexican Stats Office) API with R |
| ineq | Measuring Inequality, Concentration, and Poverty |
| ineq.2d | Two-Dimensional Decomposition of the Theil Index and the Squared Coefficient of Variation |
| ineqJD | Inequality Joint Decomposition |
| inet | Performing Inference on Networks with Regularization |
| iNEXT | Interpolation and Extrapolation for Species Diversity |
| iNEXT.3D | Interpolation and Extrapolation for Three Dimensions of Biodiversity |
| iNEXT.4steps | Four-Step Biodiversity Analysis Based on 'iNEXT' |
| iNEXT.beta3D | Interpolation and Extrapolation with Beta Diversity for Three Dimensions of Biodiversity |
| infer | Tidy Statistical Inference |
| inferCSN | Inferring Cell-Specific Gene Regulatory Network |
| InferenceSMR | Inference About the Standardized Mortality Ratio when Evaluating the Effect of a Screening Program on Survival |
| inferference | Methods for Causal Inference with Interference |
| inferr | Inferential Statistics |
| infiltrodiscR | Minidisc Infiltrometer Data Management |
| infinitefactor | Bayesian Infinite Factor Models |
| InfiniumPurify | Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis |
| infix | Basic Infix Binary Operators |
| Inflation | Core Inflation |
| inflection | Finds the Inflection Point of a Curve |
| InflectSSP | Melt Curve Fitting and Melt Shift Analysis |
| influence.ME | Tools for Detecting Influential Data in Mixed Effects Models |
| influence.SEM | Case Influence in Structural Equation Models |
| influenceAUC | Identify Influential Observations in Binary Classification |
| influenceR | Software Tools to Quantify Structural Importance of Nodes in a Network |
| influential | Identification and Classification of the Most Influential Nodes |
| influxdbclient | 'InfluxDB' 2.x Client |
| influxdbr | R Interface to InfluxDB |
| infoDecompuTE | Information Decomposition of Two-Phase Experiments |
| Information | Data Exploration with Information Theory (Weight-of-Evidence and Information Value) |
| InformativeCensoring | Multiple Imputation for Informative Censoring |
| informativeSCI | Informative Simultaneous Confidence Intervals |
| informedSen | Sensitivity Analysis Informed by a Test for Bias |
| INFOSET | Computing a New Informative Distribution Set of Asset Returns |
| infotheo | Information-Theoretic Measures |
| InfoTrad | Calculates the Probability of Informed Trading (PIN) |
| infraFDTD.assist | IO Help for infraFDTD Model |
| Infusion | Inference Using Simulation |
| ingredients | Effects and Importances of Model Ingredients |
| ini | Read and Write '.ini' Files |
| injectoR | R Dependency Injection |
| InjurySeverityScore | Translate ICD-9 into Injury Severity Score |
| injurytools | A Toolkit for Sports Injury Data Analysis |
| INLABMA | Bayesian Model Averaging with INLA |
| inlabru | Bayesian Latent Gaussian Modelling using INLA and Extensions |
| INLAjoint | Multivariate Joint Modeling for Longitudinal and Time-to-Event Outcomes with 'INLA' |
| inlamemi | Missing Data and Measurement Error Modelling in INLA |
| INLAspacetime | Spatial and Spatio-Temporal Models using 'INLA' |
| inlcolor | Color Schemes for the USGS Idaho National Laboratory Project Office |
| inldata | Collection of Datasets for the USGS-INL Monitoring Networks |
| inline | Functions to Inline C, C++, Fortran Function Calls from R |
| inlinedocs | Convert Inline Comments to Documentation |
| inlpubs | USGS INL Project Office Publications |
| innsight | Get the Insights of Your Neural Network |
| inops | Infix Operators for Detection, Subsetting and Replacement |
| inpdfr | Analyse Text Documents Using Ecological Tools |
| inplace | In-place Operators for R |
| InPosition | Inference Tests for ExPosition |
| INQC | Quality Control of Climatological Daily Time Series |
| Inquilab | Dissipation Kinetics Analysis, Half Life Period, Rate Constant, Plots |
| insane | INsulin Secretion ANalysEr |
| insect | Informatic Sequence Classification Trees |
| insee | Tools to Easily Download Data from INSEE BDM Database |
| insight | Easy Access to Model Information for Various Model Objects |
| InSilicoVA | Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm |
| InspectChangepoint | High-Dimensional Changepoint Estimation via Sparse Projection |
| inspectdf | Inspection, Comparison and Visualisation of Data Frames |
| InspectionPlanner | Phytosanitary Inspection Sampling Planner |
| inspector | Validation of Arguments and Objects in User-Defined Functions |
| INSPECTumours | IN-vivo reSPonsE Classification of Tumours |
| INSPIRE | Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets |
| instagramadsR | Access to Instagram Ads via the 'Windsor.ai' API |
| install.load | Check, Install and Load CRAN Packages |
| installr | Using R to Install Stuff on Windows OS (Such As: R, 'Rtools', 'RStudio', 'Git', and More!) |
| instantiate | Pre-Compiled 'CmdStan' Models in R Packages |
| instaR | Access to Instagram API via R |
| insuranceData | A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance |
| insurancerating | Analytic Insurance Rating Techniques |
| InsuSensCalc | Insulin Sensitivity Indices Calculator |
| intamap | Procedures for Automated Interpolation |
| intamapInteractive | Interactive Add-on Functionality for 'intamap' |
| IntCal | Radiocarbon Calibration Curves |
| intccr | Semiparametric Competing Risks Regression under Interval Censoring |
| intcensROC | AUC Estimation of Interval Censored Survival Data |
| integIRTy | Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory |
| integr | An Implementation of Interaction Graphs of Aleks Jakulin |
| IntegrateBs | Integration for B-Spline |
| IntegratedJM | Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature |
| IntegratedMRF | Integrated Prediction using Uni-Variate and Multivariate Random Forests |
| intendo | A Group of Fun Datasets of Various Sizes and Differing Levels of Quality |
| intensegRid | R Wrapper for the Carbon Intensity API |
| intensitynet | Intensity Analysis of Spatial Point Patterns on Complex Networks |
| InteractionPoweR | Power Analyses for Interaction Effects in Cross-Sectional Regressions |
| interactionR | Full Reporting of Interaction Analyses |
| interactionRCS | Calculate Estimates in Models with Interaction |
| interactions | Comprehensive, User-Friendly Toolkit for Probing Interactions |
| interactionTest | Calculates Critical Test Statistics to Control False Discovery Rates in Marginal Effects Plots |
| Interatrix | Compute Chi-Square Measures with Corrections |
| interca | Multiple Correspondence Analysis Based on Interpretive Coordinates |
| InteRD | The Integrated and Robust Deconvolution |
| interep | Interaction Analysis of Repeated Measure Data |
| interface | Runtime Type System |
| InterfaceqPCR | GUI to Analyse qPCR Results after PMA Treatment or not |
| interfacer | Define and Enforce Contracts for Dataframes as Function Parameters |
| interflex | Multiplicative Interaction Models Diagnostics and Visualization |
| interfr | Interference Color Charts for Polarized Light Microscopy |
| intergraph | Coercion Routines for Network Data Objects |
| interim | Scheduling Interim Analyses in Clinical Trials |
| interimApp | App for Scheduling Interim Analyses in Clinical Trials |
| interleave | Converts Tabular Data to Interleaved Vectors |
| interlineaR | Importing Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software |
| InterNL | Time Series Intervention Model Using Non-Linear Function |
| interp | Interpolation Methods |
| interplex | Coercion Methods for Simplicial Complex Data Structures |
| interplot | Plot the Effects of Variables in Interaction Terms |
| interpolation | Interpolation of Bivariate Functions |
| interpolators | Some Interpolation Methods |
| interpretCI | Estimate the Confidence Interval and Interpret Step by Step |
| InterpretMSSpectrum | Interpreting High Resolution Mass Spectra |
| interpretR | Binary Classifier and Regression Model Interpretation Functions |
| inters | Flexible Tools for Estimating Interactions |
| InterSIM | Simulation of Inter-Related Genomic Datasets |
| InterVA4 | Replicate and Analyse 'InterVA4' |
| InterVA5 | Replicate and Analyse 'InterVA5' |
| interval | Weighted Logrank Tests and NPMLE for Interval Censored Data |
| intervalaverage | Time-Weighted Averaging for Interval Data |
| IntervalQuestionStat | Tools to Deal with Interval-Valued Responses in Questionnaires |
| intervals | Tools for Working with Points and Intervals |
| IntervalSurgeon | Operating on Integer-Bounded Intervals |
| intervcomp | Hypothesis Testing Using the Overlapping Interval Estimates |
| inTextSummaryTable | Creation of in-Text Summary Table |
| inti | Tools and Statistical Procedures in Plant Science |
| intkrige | A Numerical Implementation of Interval-Valued Kriging |
| intmap | Ordered Containers with Integer Keys |
| intmed | Mediation Analysis using Interventional Effects |
| IntNMF | Integrative Clustering of Multiple Genomic Dataset |
| intradayModel | Modeling and Forecasting Financial Intraday Signals |
| inTrees | Interpret Tree Ensembles |
| intRegGOF | Integrated Regression Goodness of Fit |
| INTRIGUE | Quantify and Control Reproducibility in High-Throughput Experiments |
| intRinsic | Likelihood-Based Intrinsic Dimension Estimators |
| intrinsicDimension | Intrinsic Dimension Estimation |
| intrinsicFRP | An R Package for Factor Model Asset Pricing |
| intrinsicKappa | Sample Size Planning Based on Intrinsic Kappa Value |
| intrval | Relational Operators for Intervals |
| intRvals | Analysis of Time-Ordered Event Data with Missed Observations |
| intSDM | Reproducible Integrated Species Distribution Models Across Norway using 'INLA' |
| intsurv | Integrative Survival Modeling |
| intsvy | International Assessment Data Manager |
| inum | Interval and Enum-Type Representation of Vectors |
| invacost | Analyse Biological Invasion Costs with the 'InvaCost' Database |
| InvariantCausalPrediction | Invariant Causal Prediction |
| InvasionCorrection | Invasion Correction |
| invctr | Infix Functions For Vector Operations |
| inventorize | Inventory Analytics, Pricing and Markdowns |
| Inventorymodel | Inventory Models |
| inverseRegex | Reverse Engineers Regular Expression Patterns for R Objects |
| invertiforms | Invertible Transforms for Matrices |
| investr | Inverse Estimation/Calibration Functions |
| invgamma | The Inverse Gamma Distribution |
| invgamstochvol | Obtains the Log Likelihood for an Inverse Gamma Stochastic Volatility Model |
| invGauss | Threshold Regression that Fits the (Randomized Drift) Inverse Gaussian Distribution to Survival Data |
| InvStablePrior | Inverse Stable Prior for Widely-Used Exponential Models |
| iNZightMR | Tools for Exploring Multiple Response Data |
| iNZightPlots | Graphical Tools for Exploring Data with 'iNZight' |
| iNZightRegression | Tools for Exploring Regression Models with 'iNZight' |
| iNZightTools | Tools for 'iNZight' |
| iNZightTS | Time Series for 'iNZight' |
| io | A Unified Framework for Input-Output Operations in R |
| ioanalysis | Input Output Analysis |
| IOHanalyzer | Data Analysis Part of 'IOHprofiler' |
| IOHexperimenter | Benchmarking Part of the 'IOHprofiler' |
| IOLS | Iterated Ordinary Least Squares Regression |
| ioncopy | Calling Copy Number Alterations in Amplicon Sequencing Data |
| ionet | Network Analysis for Input-Output Tables |
| ionr | Test for Indifference of Indicator |
| iopsych | Methods for Industrial/Organizational Psychology |
| iosmooth | Functions for Smoothing with Infinite Order Flat-Top Kernels |
| iotables | Reproducible Input-Output Economics Analysis, Economic and Environmental Impact Assessment with Empirical Data |
| iotarelr | Iota Inter Coder Reliability for Content Analysis |
| iotools | I/O Tools for Streaming |
| IP | Classes and Methods for 'IP' Addresses |
| ip2location | Lookup for IP Address Information |
| ip2locationio | Lookup Geolocation and Proxy Information using 'IP2Location.io' API |
| ip2proxy | Lookup for IP Address Proxy Information |
| ip2whois | Lookup 'WHOIS' Information for a Particular Domain |
| ipa | Convert Between Phonetic Alphabets |
| ipaddress | Data Analysis for IP Addresses and Networks |
| ipADMIXTURE | Iterative Pruning Population Admixture Inference Framework |
| ipanema | Read Data from 'LimeSurvey' |
| ipbase | Client for the 'ipbase.com' IP Geolocation API |
| ipc | Tools for Message Passing Between Processes |
| IPCAPS | Iterative Pruning to Capture Population Structure |
| IPCWK | Kendall's Tau Partial Corr. for Survival Trait and Biomarkers |
| ipcwswitch | Inverse Probability of Censoring Weights to Deal with Treatment Switch in Randomized Clinical Trials |
| ipd | Inference on Predicted Data |
| IPDfromKM | Map Digitized Survival Curves Back to Individual Patient Data |
| ipdw | Spatial Interpolation by Inverse Path Distance Weighting |
| ipeadatar | API Wrapper for 'Ipeadata' |
| ipeaplot | Add Ipea Editorial Standards to 'ggplot2' Graphics |
| IPEC | Root Mean Square Curvature Calculation |
| IPEDS | Data from the Integrated Post-Secondary Education Data System |
| IPEDSuploadables | Transforms Institutional Data into Text Files for IPEDS Automated Import/Upload |
| iperform | Time Series Performance |
| ipflasso | Integrative Lasso with Penalty Factors |
| ipfp | Fast Implementation of the Iterative Proportional Fitting Procedure in C |
| ipfr | List Balancing for Reweighting and Population Synthesis |
| ipft | Indoor Positioning Fingerprinting Toolset |
| ipkg | Install R Packages or Download File from GitHub via the Proxy Site |
| IPLGP | Identification of Parental Lines via Genomic Prediction |
| iplookupapi | Client for the 'iplookupapi.com' IP Lookup API |
| iplots | iPlots - Interactive Graphics for R |
| IPMbook | Functions and Data for the Book 'Integrated Population Models' |
| ipmr | Integral Projection Models |
| ipolygrowth | Individual Growth Curve Parameter Calculation using Polynomial Functions |
| IPPP | Inhomogeneous Poisson Point Processes |
| ipr | Iterative Proportional Repartition Algorithm |
| ipred | Improved Predictors |
| iprior | Regression Modelling using I-Priors |
| iPRISM | Intelligent Predicting Response to Cancer Immunotherapy Through Systematic Modeling |
| ips | Interfaces to Phylogenetic Software in R |
| ipsecr | Spatially Explicit Capture-Recapture by Inverse Prediction |
| ipsfs | Intuitionistic, Pythagorean, and Spherical Fuzzy Similarity Measure |
| ipsRdbs | Introduction to Probability, Statistics and R for Data-Based Sciences |
| ipumsr | An R Interface for Downloading, Reading, and Handling IPUMS Data |
| IPV | Item Pool Visualization |
| ipw | Estimate Inverse Probability Weights |
| IPWboxplot | Adapted Boxplot to Missing Observations |
| ipwCoxCSV | Inverse Probability Weighted Cox Model with Corrected Sandwich Variance |
| ipwErrorY | Inverse Probability Weighted Estimation of Average Treatment Effect with Misclassified Binary Outcome |
| iq | Protein Quantification in Mass Spectrometry-Based Proteomics |
| IQCC | Improved Quality Control Charts |
| ir | Functions to Handle and Preprocess Infrared Spectra |
| irace | Iterated Racing for Automatic Algorithm Configuration |
| iraceplot | Plots for Visualizing the Data Produced by the 'irace' Package |
| irboost | Iteratively Reweighted Boosting for Robust Analysis |
| IRCcheck | Irrepresentable Condition Check |
| ircor | Correlation Coefficients for Information Retrieval |
| IRdisplay | 'Jupyter' Display Machinery |
| iRegression | Regression Methods for Interval-Valued Variables |
| iRepro | Reproducibility for Interval-Censored Data |
| Irescale | Calculate and Rectify Moran's I |
| IRexamples | Collection of Practical Institutional Research Examples and Tutorials |
| irg | Instantaneous Rate of Green Up |
| IrishDirectorates | A Dynamic Bipartite Latent Space Model to Analyse Irish Companies' Boards from 2003 to 2013 |
| IRISMustangMetrics | Statistics and Metrics for Seismic Data |
| IRISSeismic | Classes and Methods for Seismic Data Analysis |
| IRkernel | Native R Kernel for the 'Jupyter Notebook' |
| irlba | Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices |
| iRoCoDe | Incomplete Row-Column Designs |
| IRon | Solving Imbalanced Regression Tasks |
| irr | Various Coefficients of Interrater Reliability and Agreement |
| IRR2FPR | Computing False Positive Rate from Inter-Rater Reliability |
| irrCAC | Computing Chance-Corrected Agreement Coefficients (CAC) |
| IrregLong | Analysis of Longitudinal Data with Irregular Observation Times |
| irrICC | Intraclass Correlations for Quantifying Inter-Rater Reliability |
| irrNA | Coefficients of Interrater Reliability – Generalized for Randomly Incomplete Datasets |
| irt | Item Response Theory and Computerized Adaptive Testing Functions |
| irtawsi | Items Response Theory Analysis with Steps and Interpretation |
| IRTBEMM | Family of Bayesian EMM Algorithm for Item Response Models |
| irtDemo | Item Response Theory Demo Collection |
| IRTest | Parameter Estimation of Item Response Theory with Estimation of Latent Distribution |
| irtGUI | Item Response Theory Analysis with a Graphic User Interface |
| irtoys | A Collection of Functions Related to Item Response Theory (IRT) |
| irtpwr | Power Analysis for IRT Models Using the Wald, LR, Score, and Gradient Statistics |
| irtQ | Unidimensional Item Response Theory Modeling |
| irtrees | Estimation of Tree-Based Item Response Models |
| irtreliability | Item Response Theory Reliability |
| IRTShiny | Item Response Theory via Shiny |
| isa2 | The Iterative Signature Algorithm |
| ISAR | Introduction to Sports Analytics using R (ISAR) Data |
| ISAT | Extract Cell Density and Nearest Distance Based on 'PerkinElmer InForm' Software Output |
| isatabr | Implementation for the ISA Abstract Model |
| ISCA | Compare Heterogeneous Social Groups |
| ISCO08ConveRsions | Converts ISCO-08 to Job Prestige Scores, ISCO-88 and Job Name |
| iscoCrosswalks | Crosswalks Between Classifications of Occupations |
| Iscores | Proper Scoring Rules for Missing Value Imputation |
| isdals | Datasets for Introduction to Statistical Data Analysis for the Life Sciences |
| isdparser | Parse 'NOAA' Integrated Surface Data Files |
| ISEtools | Ion Selective Electrodes Analysis Methods |
| iSFun | Integrative Dimension Reduction Analysis for Multi-Source Data |
| IsingFit | Fitting Ising Models Using the ELasso Method |
| Isinglandr | Landscape Construction and Simulation for Ising Networks |
| isingLenzMC | Monte Carlo for Classical Ising Model |
| IsingSampler | Sampling Methods and Distribution Functions for the Ising Model |
| island | Stochastic Island Biogeography Theory Made Easy |
| islasso | The Induced Smoothed Lasso |
| ISLR | Data for an Introduction to Statistical Learning with Applications in R |
| ISLR2 | Introduction to Statistical Learning, Second Edition |
| ISM | Interpretive Structural Modelling (ISM) |
| ismev | An Introduction to Statistical Modeling of Extreme Values |
| ismtchile | Calculating Socio Material Territorial Index |
| isni | Index of Local Sensitivity to Nonignorability |
| isnullptr | Check if an 'externalptr' is a Null Pointer |
| Iso | Functions to Perform Isotonic Regression |
| ISO11784Tools | ISO11784 PIT Tag ID Format Converters |
| isoband | Generate Isolines and Isobands from Regularly Spaced Elevation Grids |
| isoboost | Isotonic Boosting Classification Rules |
| isobxr | Stable Isotope Box Modelling in R |
| isocalcR | Isotope Calculations in R |
| isocat | Isotope Origin Clustering and Assignment Tools |
| IsoCheck | Isomorphism Check for Multi-Stage Factorial Designs with Randomization Restrictions |
| isocir | Isotonic Inference for Circular Data |
| ISOcodes | Selected ISO Codes |
| IsoCor | Analyze Isotope Ratios in a 'Shiny'-App |
| isocountry | ISO 3166-1 Country Codes |
| isodistrreg | Isotonic Distributional Regression (IDR) |
| isogeochem | Tools for Stable Isotope Geochemistry |
| isokernel | Isolation Kernel |
| IsoMemo | Retrieve Data using the 'IsoMemo' API |
| isoorbi | Process Orbitrap Isotopocule Data |
| isopam | Clustering of Sites with Species Data |
| isopleuros | Ternary Plots |
| IsoplotR | Statistical Toolbox for Radiometric Geochronology |
| IsoplotRgui | Web Interface to 'IsoplotR' |
| ISOpureR | Deconvolution of Tumour Profiles |
| IsoriX | Isoscape Computation and Inference of Spatial Origins using Mixed Models |
| IsoSpecR | The IsoSpec Algorithm |
| isoSurv | Isotonic Regression on Survival Analysis |
| isotone | Active Set and Generalized PAVA for Isotone Optimization |
| isotonic.pen | Penalized Isotonic Regression in one and two dimensions |
| IsotopeR | Stable Isotope Mixing Model |
| isotracer | Isotopic Tracer Analysis Using MCMC |
| isotree | Isolation-Based Outlier Detection |
| isoWater | Discovery, Retrieval, and Analysis of Water Isotope Data |
| ISOweek | Week of the year and weekday according to ISO 8601 |
| ispd | Incomplete Split-Plot Designs |
| ispdata | Access Data from the Public Security Institute of the State of Rio De Janeiro |
| ISR | The Iterated Score Regression-Based Estimation Algorithm |
| ISRaD | Tools and Data for the International Soil Radiocarbon Database |
| ISS | Isotonic Subgroup Selection |
| istacr | Obtaining Open Data from Instituto Canario De Estadistica (ISTAC) API |
| istat | Download and Manipulate Data from Istat |
| iSTATS | A Graphical Interface to Perform STOCSY Analyses on NMR Data |
| iSubGen | Integrative Subtype Generation |
| isva | Independent Surrogate Variable Analysis |
| ISwR | Introductory Statistics with R |
| italy | The Italian Survey on Household and Wealth, 2008 and 2010 |
| itan | Item Analysis for Multiple Choice Tests |
| itcSegment | Individual Tree Crowns Segmentation |
| itdr | Integral Transformation Methods for SDR in Regression |
| itemanalysis | Classical Test Theory Item Analysis |
| iTensor | ICA-Based Matrix/Tensor Decomposition |
| IterativeHardThresholding | Iterative Hard Thresholding Extensions to Cyclops |
| iteratoR | Print Loop Iterations at Exponentially Disparate Intervals |
| iterators | Provides Iterator Construct |
| iterLap | Approximate Probability Densities by Iterated Laplace Approximations |
| iterors | Fast, Compact Iterators and Tools |
| iterpc | Efficient Iterator for Permutations and Combinations |
| itertools | Iterator Tools |
| itertools2 | itertools2: Functions creating iterators for efficient looping |
| ITNr | Analysis of the International Trade Network |
| itol.toolkit | Helper Functions for 'Interactive Tree Of Life' |
| iTOP | Inferring the Topology of Omics Data |
| iTOS | Methods and Examples from Introduction to the Theory of Observational Studies |
| itp | The Interpolate, Truncate, Project (ITP) Root-Finding Algorithm |
| itraxR | Itrax Data Analysis Tools |
| its.analysis | Running Interrupted Time Series Analysis |
| itsadug | Interpreting Time Series and Autocorrelated Data Using GAMMs |
| itscalledsoccer | American Soccer Analysis API Client |
| itsdm | Isolation Forest-Based Presence-Only Species Distribution Modeling |
| itsmr | Time Series Analysis Using the Innovations Algorithm |
| iucnr | IUCN Red List Data |
| ivaBSS | Tools for Independent Vector Analysis |
| ivdesc | Profiling Compliers and Non-Compliers for Instrumental Variable Analysis |
| ivdesign | Hypothesis Testing in Cluster-Randomized Encouragement Designs |
| ivDiag | Estimation and Diagnostic Tools for Instrumental Variables Designs |
| ivdoctr | Ensures Mutually Consistent Beliefs When Using IVs |
| ivgets | General to Specific Modeling and Indicator Saturation in 2SLS Models |
| ivitr | Estimate IV-Optimal Individualized Treatment Rules |
| ivmodel | Statistical Inference and Sensitivity Analysis for Instrumental Variables Model |
| ivmte | Instrumental Variables: Extrapolation by Marginal Treatment Effects |
| ivo.table | Nicely Formatted Contingency Tables and Frequency Tables |
| ivreg | Instrumental-Variables Regression by '2SLS', '2SM', or '2SMM', with Diagnostics |
| ivs | Interval Vectors |
| ivsacim | Structural Additive Cumulative Intensity Models with IV |
| ivtools | Instrumental Variables |
| ivx | Robust Econometric Inference |
| IVYplot | Produces an IVY Plot (Similar to Dot Plot) with/without Frequencies |
| iwaqr | Irrigation Water Quality Assessment and Visualizations |
| iWeigReg | Improved Methods for Causal Inference and Missing Data Problems |
| ixplorer | Easy DataOps for R Users |
| IxPopDyMod | Framework for Tick Population and Infection Modeling |
| iZID | Identify Zero-Inflated Distributions |
| izmir | R Wrapper for Izmir Municipality Open Data Portal |
| jaatha | Simulation-Based Maximum Likelihood Parameter Estimation |
| jab.adverse.reactions | Possible Adverse Events/Reactions from the Vaccinations/Experimental Gene Therapies |
| jaccard | Test Similarity Between Binary Data using Jaccard/Tanimoto Coefficients |
| jack | Jack, Zonal, Schur, and Other Symmetric Polynomials |
| jackalope | A Swift, Versatile Phylogenomic and High-Throughput Sequencing Simulator |
| jackknifeR | Delete-d Jackknife for Point and Interval Estimation |
| jackstrap | Correcting Nonparametric Frontier Measurements for Outliers |
| jackstraw | Statistical Inference for Unsupervised Learning |
| jacobi | Jacobi Theta Functions and Related Functions |
| JacobiEigen | Classical Jacobi Eigenvalue Algorithm |
| jacpop | Jaccard Index for Population Structure Identification |
| Jacquard | Estimation of Jacquard's Genetic Identity Coefficients |
| JADE | Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria |
| jadeLizardOptions | Trading Jade Lizard Option Strategies |
| jage | Estimation of Developmental Age |
| jaggR | Supporting Files and Functions for the Book Bayesian Modelling with 'JAGS' |
| jagshelper | Extracting and Visualizing Output from 'jagsUI' |
| jagstargets | Targets for JAGS Pipelines |
| JAGStree | Automatically Write 'JAGS' Code for Hierarchical Bayesian Models on Trees |
| jagsUI | A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses |
| jalcal | Conversion Between Jalali (Persian or Solar Hijri) and Gregorian Calendar Dates |
| JamendoR | Access to 'Jamendo' API |
| JANE | Just Another Latent Space Network Clustering Algorithm |
| janeaustenr | Jane Austen's Complete Novels |
| janitor | Simple Tools for Examining and Cleaning Dirty Data |
| janus | Optimized Recommending System Based on 'tensorflow' |
| japanstat | Tools for Easy Use of 'e-Stat' API |
| jarbes | Just a Rather Bayesian Evidence Synthesis |
| JATSdecoder | A Metadata and Text Extraction and Manipulation Tool Set |
| JavaGD | Java Graphics Device |
| Jaya | Gradient-Free Optimization Algorithm for Single and Multi-Objective Problems |
| JBrowseR | An R Interface to the JBrowse 2 Genome Browser |
| jcalendaR | Interconversion Between the Japanese Calendar System and the Western Calendar |
| jcext | Extended Classification of Weather Types |
| jcolors | Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2' |
| jcp | Joint Change Point Detection |
| JCRImpactFactor | Journal Citation Reports ('JCR') Impact Factor by 'Clarivate' 'Analytics' |
| Jcvrisk | Risk Calculator for Cardiovascular Disease in Japan |
| JDCruncheR | Interface Between the 'JDemetra+' Cruncher and R, and Quality Report Generator |
| jdenticon | A Wrapper for the Node.js 'Jdenticon' Library |
| Jdmbs | Monte Carlo Option Pricing Algorithms for Jump Diffusion Models with Correlational Companies |
| jds.rmd | R Markdown Templates for Journal of Data Science |
| jeek | A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models |
| jenga | Fast Extrapolation of Time Features using K-Nearest Neighbors |
| jetpack | A Friendly Package Manager |
| jetset | One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays |
| jewel | Graphical Models Estimation from Multiple Sources |
| jfa | Statistical Methods for Auditing |
| JFE | Tools for Analyzing Time Series Data of Just Finance and Econometrics |
| JFM | Rock Mass Structural Analysis from 3D Mesh of Point Cloud |
| JGL | Performs the Joint Graphical Lasso for Sparse Inverse Covariance Estimation on Multiple Classes |
| JGR | Java GUI for R |
| jgsbook | Package of the German Book "Statistik mit R und RStudio" by Joerg grosse Schlarmann |
| JICO | Joint and Individual Regression |
| jiebaR | Chinese Text Segmentation |
| jiebaRD | Chinese Text Segmentation Data for jiebaR Package |
| jinjar | Template Engine Inspired by 'Jinja' |
| jipApprox | Approximate Inclusion Probabilities for Survey Sampling |
| jjb | Balamuta Miscellaneous |
| jlctree | Joint Latent Class Trees for Joint Modeling of Time-to-Event and Longitudinal Data |
| jlme | Regression Modelling with 'GLM.jl' and 'MixedModels.jl' in 'Julia' |
| jlmerclusterperm | Cluster-Based Permutation Analysis for Densely Sampled Time Data |
| JLPM | Joint Latent Process Models |
| JM | Joint Modeling of Longitudinal and Survival Data |
| jmastats | Download Weather Data from Japan Meteorological Agency Website |
| jmatrix | Read from/Write to Disk Matrices with any Data Type in a Binary Format |
| JMbayes | Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach |
| JMbayes2 | Extended Joint Models for Longitudinal and Time-to-Event Data |
| jmBIG | Joint Longitudinal and Survival Model for Big Data |
| jmcm | Joint Mean-Covariance Models using 'Armadillo' and S4 |
| jmdem | Fitting Joint Mean and Dispersion Effects Models |
| JMdesign | Joint Modeling of Longitudinal and Survival Data - Power Calculation |
| jmetrik | Tools for Interacting with 'jMetrik' |
| JMH | Joint Model of Heterogeneous Repeated Measures and Survival Data |
| JMI | Jackknife Mutual Information |
| Jmisc | Julian Miscellaneous Function |
| jmotif | Time Series Analysis Toolkit Based on Symbolic Aggregate Discretization, i.e. SAX |
| jmuOutlier | Permutation Tests for Nonparametric Statistics |
| jmv | The 'jamovi' Analyses |
| jmvconnect | Connect to the 'jamovi' Statistical Spreadsheet |
| jmvcore | Dependencies for the 'jamovi' Framework |
| jmvReadWrite | Read and Write 'jamovi' Files ('.omv') |
| JNplots | Visualize Outputs from the 'Johnson-Neyman' Technique |
| job | Run Code as an RStudio Job - Free Your Console |
| jocre | Joint Confidence Regions |
| JoF | Modelling and Simulating Judgments of Frequency |
| joineR | Joint Modelling of Repeated Measurements and Time-to-Event Data |
| joineRML | Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes |
| joinet | Penalised Multivariate Regression ('Multi-Target Learning') |
| joint.Cox | Joint Frailty-Copula Models for Tumour Progression and Death in Meta-Analysis |
| JointAI | Joint Analysis and Imputation of Incomplete Data |
| jointCalib | A Joint Calibration of Totals and Quantiles |
| jointDiag | Joint Approximate Diagonalization of a Set of Square Matrices |
| JointFPM | A Parametric Model for Estimating the Mean Number of Events |
| jointMeanCov | Joint Mean and Covariance Estimation for Matrix-Variate Data |
| jointNmix | Joint N-Mixture Models for Site-Associated Species |
| jointPm | Risk Estimation Using the Joint Probability Method |
| jointseg | Joint Segmentation of Multivariate (Copy Number) Signals |
| jointVIP | Prioritize Variables with Joint Variable Importance Plot in Observational Study Design |
| joinXL | Perform Joins or Minus Queries on 'Excel' Files |
| jomo | Multilevel Joint Modelling Multiple Imputation |
| JOPS | Practical Smoothing with P-Splines |
| jordan | A Suite of Routines for Working with Jordan Algebras |
| JoSAE | Unit-Level and Area-Level Small Area Estimation |
| josaplay | Add Josa Based on Previous Letter in Korean |
| jose | JavaScript Object Signing and Encryption |
| jot | Jot Down Values for Later |
| journalabbr | Journal Abbreviations for BibTeX Documents |
| JOUSBoost | Implements Under/Oversampling for Probability Estimation |
| joyn | Tool for Diagnosis of Tables Joins and Complementary Join Features |
| jpcity | Read and Convert Japanese Municipality Codes |
| jpeg | Read and write JPEG images |
| JPEN | Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty |
| jpgrid | Functions for the Grid Square Codes in Japan |
| jpmesh | Utilities for Japanese Mesh Code |
| jpstat | Tools for Easy Use of 'e-Stat', 'RESAS' API, Etc |
| jqbr | 'jQuery QueryBuilder' Input for 'Shiny' |
| JQL | Jump Q-Learning for Individualized Interval-Valued Dose Rule |
| jqr | Client for 'jq', a 'JSON' Processor |
| jquerylib | Obtain 'jQuery' as an HTML Dependency Object |
| jrc | Exchange Commands Between R and 'JavaScript' |
| jrich | Jack-Knife Support for Evolutionary Distinctiveness Indices I and W |
| jrSiCKLSNMF | Multimodal Single-Cell Omics Dimensionality Reduction |
| jrt | Item Response Theory Modeling and Scoring for Judgment Data |
| jrvFinance | Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes |
| js | Tools for Working with JavaScript in R |
| JSconsole | A 'RStudio' Addin to Send 'JavaScript' Code to the 'V8' Console |
| jScore | Calculates the j-Score Between Two Clustering Assignments |
| jSDM | Joint Species Distribution Models |
| JSDNE | Estimating the Age using Auricular Surface by DNE |
| jshintr | Lint 'JavaScript' Files |
| jskm | Kaplan-Meier Plot with 'ggplot2' |
| JSM | Semiparametric Joint Modeling of Survival and Longitudinal Data |
| JSmediation | Mediation Analysis Using Joint Significance |
| jsmodule | 'RStudio' Addins and 'Shiny' Modules for Medical Research |
| json2aRgs | Parse Parameters Inside a Docker Container |
| json64 | A 'Base64' Encode/Decode Package with Support for JSON Output/Input and UTF-8 |
| jsonify | Convert Between 'R' Objects and Javascript Object Notation (JSON) |
| jsonld | JSON for Linking Data |
| jsonlite | A Simple and Robust JSON Parser and Generator for R |
| jsonNormalize | Normalization of 'JSON' Strings |
| jsonstat | Interface to 'JSON-stat' |
| jsonStrings | Manipulation of JSON Strings |
| jsonvalidate | Validate 'JSON' Schema |
| JSparO | Joint Sparse Optimization via Proximal Gradient Method for Cell Fate Conversion |
| jstable | Create Tables from Different Types of Regression |
| jstager | Retrieve Information Published on J-STAGE |
| jstor | Read Data from JSTOR/DfR |
| jsTree | Create Interactive Trees with the 'jQuery' 'jsTree' Plugin |
| jsTreeR | A Wrapper of the JavaScript Library 'jsTree' |
| JSUparameters | Estimate Parameters of the Best-Fitting JohnsonSU Distribution |
| jtdm | Joint Modelling of Functional Traits |
| jti | Junction Tree Inference |
| jtools | Analysis and Presentation of Social Scientific Data |
| jubilee | Forecasting Long-Term Growth of the U.S. Stock Market and Business Cycles |
| juicedown | 'juice' + 'markdown': Convert 'R Markdown' into 'HTML' with Inline Styles |
| juicr | Automated and Manual Extraction of Numerical Data from Scientific Images |
| juicyjuice | Inline CSS Properties into HTML Tags Using 'juice' |
| Julia | Fractal Image Data Generator |
| JuliaCall | Seamless Integration Between R and 'Julia' |
| JuliaConnectoR | A Functionally Oriented Interface for Integrating 'Julia' with R |
| JuliaFormulae | Translate R Regression Model Formulae to 'Julia' Syntax |
| JUMP | Replicability Analysis of High-Throughput Experiments |
| junctions | The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages |
| just.install | Very Simple Function to Install Packages without Attaching |
| justifier | Human and Machine-Readable Justifications and Justified Decisions Based on 'YAML' |
| JustifyAlpha | Justifying Alpha Levels for Hypothesis Tests |
| jvcoords | Principal Component Analysis (PCA) and Whitening |
| jvnVaR | Value at Risk |
| JWileymisc | Miscellaneous Utilities and Functions |
| k5 | Kiernan Nicholls Miscellaneous |
| kableExtra | Construct Complex Table with 'kable' and Pipe Syntax |
| kader | Kernel Adaptive Density Estimation and Regression |
| kaigiroku | Programmatic Access to the API for Japanese Diet Proceedings |
| kairos | Analysis of Chronological Patterns from Archaeological Count Data |
| kalmanfilter | Kalman Filter |
| kamila | Methods for Clustering Mixed-Type Data |
| kangar00 | Kernel Approaches for Nonlinear Genetic Association Regression |
| kanjistat | A Statistical Framework for the Analysis of Japanese Kanji Characters |
| kantorovich | Kantorovich Distance Between Probability Measures |
| kaos | Encoding of Sequences Based on Frequency Matrix Chaos Game Representation |
| kaphom | Test the Homogeneity of Kappa Statistics |
| kappaGold | Agreement of Nominal Scale Raters with a Gold Standard |
| KappaGUI | An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa |
| kappalab | Non-Additive Measure and Integral Manipulation Functions |
| kappaSize | Sample Size Estimation Functions for Studies of Interobserver Agreement |
| KaradaColor | Color Palettes Inspired by Japanese Landscape and Culture |
| karaoke | Remove Vocals from a Song |
| karel | Learning programming with Karel the robot |
| Karen | Kalman Reaction Networks |
| karlen | Real-Time PCR Data Sets by Karlen et al. (2007) |
| KarsTS | An Interface for Microclimate Time Series Analysis |
| karyotapR | DNA Copy Number Analysis for Genome-Wide Tapestri Panels |
| katex | Rendering Math to HTML, 'MathML', or R-Documentation Format |
| kayadata | Kaya Identity Data for Nations and Regions |
| kazaam | Tools for Tall Distributed Matrices |
| kbal | Kernel Balancing |
| KbMvtSkew | Khattree-Bahuguna's Univariate and Multivariate Skewness |
| kcmeans | Conditional Expectation Function Estimation with K-Conditional-Means |
| Kcop | Smooth Test for Equality of Copulas and Clustering Multivariate |
| kcpRS | Kernel Change Point Detection on the Running Statistics |
| KCSKNNShiny | K-Nearest Neighbour Classifier |
| KCSNBShiny | Naive Bayes Classifier |
| kde1d | Univariate Kernel Density Estimation |
| kdecopula | Kernel Smoothing for Bivariate Copula Densities |
| kdensity | Kernel Density Estimation with Parametric Starts and Asymmetric Kernels |
| kdevine | Multivariate Kernel Density Estimation with Vine Copulas |
| kDGLM | Bayesian Analysis of Dynamic Generalized Linear Models |
| kdist | K-Distribution and Weibull Paper |
| kdml | Kernel Distance Metric Learning for Mixed-Type Data |
| kdry | K's "Don't Repeat Yourself"-Collection |
| kedd | Kernel Estimator and Bandwidth Selection for Density and Its Derivatives |
| keep | Arrays with Better Control over Dimension Dropping |
| kehra | Collect, Assemble and Model Air Pollution, Weather and Health Data |
| kelvin | Calculate Solutions to the Kelvin Differential Equation using Bessel Functions |
| Kendall | Kendall Rank Correlation and Mann-Kendall Trend Test |
| kendallRandomWalks | Simulate and Visualize Kendall Random Walks and Related Distributions |
| Keng | Knock Errors Off Nice Guesses |
| KenSyn | Knowledge Synthesis in Agriculture - From Experimental Network to Meta-Analysis |
| KEPTED | Kernel-Embedding-of-Probability Test for Elliptical Distribution |
| kequate | The Kernel Method of Test Equating |
| keras | R Interface to 'Keras' |
| keras3 | R Interface to 'Keras' |
| kerastuneR | Interface to 'Keras Tuner' |
| kerDAA | New Kernel-Based Test for Differential Association Analysis |
| KERE | Expectile Regression in Reproducing Kernel Hilbert Space |
| kergp | Gaussian Process Laboratory |
| kerndwd | Distance Weighted Discrimination (DWD) and Kernel Methods |
| kernelboot | Smoothed Bootstrap and Random Generation from Kernel Densities |
| kernelFactory | Kernel Factory: An Ensemble of Kernel Machines |
| Kernelheaping | Kernel Density Estimation for Heaped and Rounded Data |
| KernelKnn | Kernel k Nearest Neighbors |
| kernelshap | Kernel SHAP |
| kernhaz | Kernel Estimation of Hazard Function in Survival Analysis |
| kernlab | Kernel-Based Machine Learning Lab |
| kernplus | A Kernel Regression-Based Multidimensional Wind Turbine Power Curve |
| kernscr | Kernel Machine Score Test for Semi-Competing Risks |
| KernSmooth | Functions for Kernel Smoothing Supporting Wand & Jones (1995) |
| KernSmoothIRT | Nonparametric Item Response Theory |
| kernstadapt | Adaptive Kernel Estimators for Point Process Intensities on Linear Networks |
| kerntools | Kernel Functions and Tools for Machine Learning Applications |
| kerSeg | New Kernel-Based Change-Point Detection |
| kerTests | Generalized Kernel Two-Sample Tests |
| kesernetwork | Visualization of the KESER Network |
| keyATM | Keyword Assisted Topic Models |
| Keyboard | Bayesian Designs for Early Phase Clinical Trials |
| KeyboardSimulator | Keyboard and Mouse Input Simulation for Windows OS |
| keyholder | Store Data About Rows |
| keyperm | Keyword Analysis Using Permutation Tests |
| keyplayer | Locating Key Players in Social Networks |
| keypress | Wait for a Key Press in a Terminal |
| keyring | Access the System Credential Store from R |
| keyringr | Decrypt Passwords from Gnome Keyring, Windows Data Protection API and macOS Keychain |
| keys | Keyboard Shortcuts for 'shiny' |
| keyToEnglish | Convert Data to Memorable Phrases |
| kfa | K-Fold Cross Validation for Factor Analysis |
| KFAS | Kalman Filter and Smoother for Exponential Family State Space Models |
| kfda | Kernel Fisher Discriminant Analysis |
| kfigr | Integrated Code Chunk Anchoring and Referencing for R Markdown Documents |
| kfino | Kalman Filter for Impulse Noised Outliers |
| KFPCA | Kendall Functional Principal Component Analysis |
| KFPLS | Kernel Functional Partial Least Squares |
| kgc | Koeppen-Geiger Climatic Zones |
| kgen | A Tool for Calculating Stoichiometric Equilibrium Constants (Ks) for Seawater |
| KGode | Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations |
| kgp | 1000 Genomes Project Metadata |
| kgrams | Classical k-gram Language Models |
| kgraph | Knowledge Graphs Constructions and Visualizations |
| kgschart | KGS Rank Graph Parser |
| khisr | An R Client to Retrieve Data from DHIS2 |
| KHQ | Methods for Calculating 'KHQ' Scores and 'KHQ5D' Utility Index Scores |
| khroma | Colour Schemes for Scientific Data Visualization |
| kibior | A Simple Data Management and Sharing Tool |
| kidney.epi | Kidney Functions: Clinical and Epidemiological |
| kidsides | Download, Cache, and Connect to KidSIDES |
| Kifidi | Summary Table and Means Plots |
| kim | A Toolkit for Behavioral Scientists |
| kimfilter | Kim Filter |
| kimisc | Kirill's Miscellaneous Functions |
| kin.cohort | Analysis of Kin-Cohort Studies |
| kindisperse | Simulate and Estimate Close-Kin Dispersal Kernels |
| kinematics | Studying Sampled Trajectories |
| KingCountyHouses | Data on House Sales in King County WA |
| KinMixLite | Inference About Relationships from DNA Mixtures |
| kinship2 | Pedigree Functions |
| KINSIMU | Panel Evaluation in Forensic Kinship Analysis |
| Kira | Machine Learning |
| kirby21.base | Example Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kirby21.fmri | Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kirby21.t1 | Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kisopenapi | Korea Investment & Securities (KIS) Open Trading API |
| kissmig | a Keep It Simple Species Migration Model |
| kit | Data Manipulation Functions Implemented in C |
| kitagawa | Spectral Response of Water Wells to Harmonic Strain and Pressure Signals |
| kiwisR | A Wrapper for Querying KISTERS 'WISKI' Databases via the 'KiWIS' API |
| kknn | Weighted k-Nearest Neighbors |
| kko | Kernel Knockoffs Selection for Nonparametric Additive Models |
| klaR | Classification and Visualization |
| klassR | Classifications and Codelists for Statistics Norway |
| klausuR | Multiple Choice Test Evaluation |
| kldest | Sample-Based Estimation of Kullback-Leibler Divergence |
| kldtools | Kullback-Leibler Divergence and Other Tools to Analyze Frequencies |
| klexdatr | Kootenay Lake Exploitation Study Data |
| KLexp | Kernel_lasso Expansion |
| klic | Kernel Learning Integrative Clustering |
| KLINK | Kinship Analysis with Linked Markers |
| klovan | Geostatistics Methods and Klovan Data |
| klsh | Blocking for Record Linkage |
| klustR | D3 Dynamic Cluster Visualizations |
| km.ci | Confidence Intervals for the Kaplan-Meier Estimator |
| kmBlock | k-Means Like Blockmodeling of One-Mode and Linked Networks |
| kmc | Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm |
| KMD | Kernel Measure of Multi-Sample Dissimilarity |
| KMEANS.KNN | KMeans and KNN Clustering Package |
| kmed | Distance-Based k-Medoids |
| Kmedians | K-Medians |
| kmer | Fast K-Mer Counting and Clustering for Biological Sequence Analysis |
| kmeRs | K-Mers Similarity Score Matrix and HeatMap |
| kmeRtone | Multi-Purpose and Flexible k-Meric Enrichment Analysis Software |
| kmi | Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting |
| kml | K-Means for Longitudinal Data |
| kml3d | K-Means for Joint Longitudinal Data |
| KMLtoSHAPE | Preserving Attribute Values: Converting KML to Shapefile |
| kmodR | K-Means with Simultaneous Outlier Detection |
| KMsurv | Data sets from Klein and Moeschberger (1997), Survival Analysis |
| KMunicate | KMunicate-Style Kaplan–Meier Plots |
| KnapsackSampling | Generate Feasible Samples of a Knapsack Problem |
| KneeArrower | Finds Cutoff Points on Knee Curves |
| knfi | Analysis of Korean National Forest Inventory Database |
| knitcitations | Citations for 'Knitr' Markdown Files |
| knitLatex | 'Knitr' Helpers - Mostly Tables |
| knitr | A General-Purpose Package for Dynamic Report Generation in R |
| knitrBootstrap | 'knitr' Bootstrap Framework |
| knitrdata | Data Language Engine for 'knitr' / 'rmarkdown' |
| knitrProgressBar | Provides Progress Bars in 'knitr' |
| knitxl | Generates a Spreadsheet Report from an 'rmarkdown' File |
| knn.covertree | An Accurate kNN Implementation with Multiple Distance Measures |
| knnmi | k-Nearest Neighbor Mutual Information Estimator |
| knnp | Time Series Prediction using K-Nearest Neighbors Algorithm (Parallel) |
| KNNShiny | Interactive Document for Working with KNN Analysis |
| kNNvs | k Nearest Neighbors with Grid Search Variable Selection |
| knnwtsim | K Nearest Neighbor Forecasting with a Tailored Similarity Metric |
| knockoff | The Knockoff Filter for Controlled Variable Selection |
| KnockoffHybrid | Hybrid Analysis of Population and Trio Data with Knockoff Statistics for FDR Control |
| KnockoffScreen | Whole-Genome Sequencing Data Analysis via Knockoff Statistics |
| KnockoffTrio | Trio Data Analysis with Knockoff Statistics for FDR Control |
| knotR | Knot Diagrams using Bezier Curves |
| KnowBR | Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases |
| kntnr | R Client for 'kintone' API |
| KoboconnectR | Download Data from Kobotoolbox to R |
| KODAMA | Knowledge Discovery by Accuracy Maximization |
| kofdata | Get Data from the 'KOF Datenservice' API |
| kofnGA | A Genetic Algorithm for Fixed-Size Subset Selection |
| KOGMWU | Functional Summary and Meta-Analysis of Gene Expression Data |
| kohonen | Supervised and Unsupervised Self-Organising Maps |
| kokudosuuchi | Utilities for 'Kokudo Suuchi' |
| komaletter | Simply Beautiful PDF Letters from Markdown |
| konfound | Quantify the Robustness of Causal Inferences |
| KONPsurv | KONP Tests: Powerful K-Sample Tests for Right-Censored Data |
| KOR.addrlink | Matching Address Data to Reference Index |
| koRpus | Text Analysis with Emphasis on POS Tagging, Readability, and Lexical Diversity |
| koRpus.lang.en | Language Support for 'koRpus' Package: English |
| kosel | Variable Selection by Revisited Knockoffs Procedures |
| kosis | Korean Statistical Information Service (KOSIS) |
| KoulMde | Koul's Minimum Distance Estimation in Regression and Image Segmentation Problems |
| Kpart | Cubic Spline Fitting with Knot Selection |
| KPC | Kernel Partial Correlation Coefficient |
| kpcaIG | Variables Interpretability with Kernel PCA |
| kpcalg | Kernel PC Algorithm for Causal Structure Detection |
| kpeaks | Determination of K Using Peak Counts of Features for Clustering |
| kpmt | Known Population Median Test |
| kpodclustr | Method for Clustering Partially Observed Data |
| KrakenR | Comprehensive R Interface for Accessing Kraken Cryptocurrency Exchange REST API |
| KraljicMatrix | A Quantified Implementation of the Kraljic Matrix |
| kriens | Continuation Passing Style Development |
| krige | Geospatial Kriging with Metropolis Sampling |
| kriging | Ordinary Kriging |
| KrigInv | Kriging-Based Inversion for Deterministic and Noisy Computer Experiments |
| krippendorffsalpha | Measuring Agreement Using Krippendorff's Alpha Coefficient |
| KRIS | Keen and Reliable Interface Subroutines for Bioinformatic Analysis |
| KRLS | Kernel-Based Regularized Least Squares |
| krm | Kernel Based Regression Models |
| KRMM | Kernel Ridge Mixed Model |
| kronos | Microbiome Oriented Circadian Rhythm Analysis Toolkit |
| ks | Kernel Smoothing |
| KSA | Retained Component Criterion for Principal Component Analysis |
| kSamples | K-Sample Rank Tests and their Combinations |
| KScorrect | Lilliefors-Corrected Kolmogorov-Smirnov Goodness-of-Fit Tests |
| KSD | Goodness-of-Fit Tests using Kernelized Stein Discrepancy |
| KSEAapp | Kinase-Substrate Enrichment Analysis |
| kselection | Selection of K in K-Means Clustering |
| KSgeneral | Computing P-Values of the One-Sample K-S Test and the Two-Sample K-S and Kuiper Tests for (Dis)Continuous Null Distribution |
| ksharp | Cluster Sharpening |
| ksNN | K* Nearest Neighbors Algorithm |
| KSPM | Kernel Semi-Parametric Models |
| ksrlive | Identify Kinase Substrate Relationships Using Dynamic Data |
| kssa | Known Sub-Sequence Algorithm |
| kst | Knowledge Space Theory |
| kStatistics | Unbiased Estimators for Cumulant Products and Faa Di Bruno's Formula |
| kstIO | Knowledge Space Theory Input/Output |
| kstMatrix | Basic Functions in Knowledge Space Theory Using Matrix Representation |
| ktaucenters | Robust Clustering Procedures |
| KTensorGraphs | Co-Tucker3 Analysis of Two Sequences of Matrices |
| ktsolve | Configurable Function for Solving Families of Nonlinear Equations |
| ktweedie | 'Tweedie' Compound Poisson Model in the Reproducing Kernel Hilbert Space |
| kuiper.2samp | Two-Sample Kuiper Test |
| Kurt | Performs Kurtosis-Based Statistical Analyses |
| kutils | Project Management Tools |
| kvh | Read/Write Files in Key-Value-Hierarchy Format |
| kyotil | Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies |
| kza | Kolmogorov-Zurbenko Adaptive Filters |
| kzs | Kolmogorov-Zurbenko Spatial Smoothing and Applications |
| l0ara | Sparse Generalized Linear Model with L0 Approximation for Feature Selection |
| L0Learn | Fast Algorithms for Best Subset Selection |
| l1ball | L1-Ball Prior for Sparse Regression |
| L1centrality | Graph/Network Analysis Based on L1 Centrality |
| l1kdeconv | Deconvolution for LINCS L1000 Data |
| L1pack | Routines for L1 Estimation |
| l1spectral | An L1-Version of the Spectral Clustering |
| l2boost | Exploring Friedman's Boosting Algorithm for Regularized Linear Regression |
| L2DensityGoFtest | Density Goodness-of-Fit Test |
| L2E | Robust Structured Regression via the L2 Criterion |
| L2hdchange | L2 Inference for Change Points in High-Dimensional Time Series |
| LA | Lioness Algorithm (LA) |
| lab2clean | Automation and Standardization of Cleaning Clinical Lab Data |
| LabApplStat | Miscellaneous Scripts from the Data Science Laboratory (UCPH) |
| labdsv | Ordination and Multivariate Analysis for Ecology |
| label.switching | Relabelling MCMC Outputs of Mixture Models |
| labeleR | Automate the Production of Custom Labels, Badges, Certificates, and Other Documents |
| labeling | Axis Labeling |
| labelled | Manipulating Labelled Data |
| labelmachine | Make Labeling of R Data Sets Easy |
| labelr | Label Data Frames, Variables, and Values |
| labelVector | Label Attributes for Atomic Vectors |
| lablaster | Laser Ablation Blast Through Endpoint Detection |
| labNorm | Normalize Laboratory Measurements by Age and Sex |
| LabourMarketAreas | Identification, Tuning, Visualisation and Analysis of Labour Market Areas |
| labourR | Classify Multilingual Labour Market Free-Text to Standardized Hierarchical Occupations |
| LabRS | Laboratorio di "Ricerca Sociale con R" |
| labsimplex | Simplex Optimization Algorithms for Laboratory and Manufacturing Processes |
| labstatR | Libreria Del Laboratorio Di Statistica Con R |
| labstats | Data Sets for the Book "Experimental Design for Laboratory Biologists" |
| lacm | Latent Autoregressive Count Models |
| lacrmr | Connect to the 'Less Annoying CRM' API |
| lactater | Tools for Analyzing Lactate Thresholds |
| lactcurves | Lactation Curve Parameter Estimation |
| lacunaritycovariance | Gliding Box Lacunarity and Other Metrics for 2D Random Closed Sets |
| lacunr | Fast 3D Lacunarity for Voxel Data |
| LAD | Derive Leaf Angle Distribution (LAD) from Measured Leaf Inclination Angles |
| LadderFuelsR | Automated Tool for Vertical Fuel Continuity Analysis using Airborne Laser Scanning Data |
| laeken | Estimation of Indicators on Social Exclusion and Poverty |
| LaF | Fast Access to Large ASCII Files |
| lagged | Classes and Methods for Lagged Objects |
| LAGOSNE | Interface to the Lake Multi-Scaled Geospatial and Temporal Database |
| laGP | Local Approximate Gaussian Process Regression |
| lagsarlmtree | Spatial Lag Model Trees |
| LagSequential | Lag-Sequential Categorical Data Analysis |
| Lahman | Sean 'Lahman' Baseball Database |
| LAIr | Converting NDVI to LAI of Field, Proximal and Satellite Data |
| LakeMetabolizer | Tools for the Analysis of Ecosystem Metabolism |
| lakemorpho | Lake Morphometry Metrics |
| laketemps | Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009 |
| lakhesis | Consensus Seriation for Binary Data |
| LAM | Some Latent Variable Models |
| LaMa | Fast Numerical Maximum Likelihood Estimation for Latent Markov Models |
| lambda.r | Modeling Data with Functional Programming |
| lambdaTS | Variational Seq2Seq Model with Lambda Transformer for Time Series Analysis |
| lambdr | Create a Runtime for Serving Containerised R Functions on 'AWS Lambda' |
| LambertW | Probabilistic Models to Analyze and Gaussianize Heavy-Tailed, Skewed Data |
| laminr | Interface for 'LaminDB' |
| lamle | Maximum Likelihood Estimation of Latent Variable Models |
| lamme | Log-Analytic Methods for Multiplicative Effects |
| lamW | Lambert-W Function |
| lancor | Statistical Inference via Lancaster Correlation |
| LandComp | Analysing Landscape Composition and Structure at Multiple Scales |
| landest | Landmark Estimation of Survival and Treatment Effect |
| landform | Topographic Position Index-Based Landform Classification |
| Landmarking | Analysis using Landmark Models |
| landmix | Landmark Prediction for Mixture Data |
| landmulti | Landmark Prediction with Multiple Short-Term Events |
| landpred | Landmark Prediction of a Survival Outcome |
| landsat | Radiometric and Topographic Correction of Satellite Imagery |
| landscapemetrics | Landscape Metrics for Categorical Map Patterns |
| landscapeR | Categorical Landscape Simulation Facility |
| landsepi | Landscape Epidemiology and Evolution |
| Langevin | Langevin Analysis in One and Two Dimensions |
| langevitour | Langevin Tour |
| languagelayeR | Access the 'languagelayer' API |
| languageR | Analyzing Linguistic Data: A Practical Introduction to Statistics |
| languageserver | Language Server Protocol |
| languageserversetup | Automated Setup and Auto Run for R Language Server |
| lans2r | Work with Look at NanoSIMS Data in R |
| LaplacesDemon | Complete Environment for Bayesian Inference |
| lar | History of labour relations package |
| lares | Analytics & Machine Learning Sidekick |
| lareshiny | Lares 'shiny' Modules |
| LARF | Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects |
| Largevars | Testing Large VARs for the Presence of Cointegration |
| LARisk | Estimation of Lifetime Attributable Risk of Cancer from Radiation Exposure |
| lars | Least Angle Regression, Lasso and Forward Stagewise |
| LassoBacktracking | Modelling Interactions in High-Dimensional Data with Backtracking |
| LassoGEE | High-Dimensional Lasso Generalized Estimating Equations |
| LassoNet | 3CoSE Algorithm |
| lassopv | Nonparametric P-Value Estimation for Predictors in Lasso |
| LassoSIR | Sparsed Sliced Inverse Regression via Lasso |
| latcontrol | Evaluation of the Role of Control Variables in Structural Equation Models |
| latdiag | Draws Diagrams Useful for Checking Latent Scales |
| latenetwork | Inference on LATEs under Network Interference of Unknown Form |
| latent2likert | Converting Latent Variables into Likert Scale Responses |
| LatentBMA | Bayesian Model Averaging for Univariate Link Latent Gaussian Models |
| latentcor | Fast Computation of Latent Correlations for Mixed Data |
| latentFactoR | Data Simulation Based on Latent Factors |
| latentgraph | Graphical Models with Latent Variables |
| latentnet | Latent Position and Cluster Models for Statistical Networks |
| later | Utilities for Scheduling Functions to Execute Later with Event Loops |
| Laterality | Functions to Calculate Common Laterality Statistics in Primatology |
| LATERmodel | Linear Approach to Threshold with Ergodic Rate for Reaction Times |
| latex2exp | Use LaTeX Expressions in Plots |
| latexdiffr | Diff TeX, 'rmarkdown' or 'quarto' Files Using the 'latexdiff' Utility |
| latexpdf | Convert Tables to PDF or PNG |
| latexSymb | Write Equations in a Way that You Can Read |
| latrend | A Framework for Clustering Longitudinal Data |
| latte | Interface to 'LattE' and '4ti2' |
| lattice | Trellis Graphics for R |
| LatticeDesign | Lattice-Based Space-Filling Designs |
| latticeExtra | Extra Graphical Utilities Based on Lattice |
| LatticeKrig | Multi-Resolution Kriging Based on Markov Random Fields |
| lava | Latent Variable Models |
| lavaan | Latent Variable Analysis |
| lavaan.printer | Helper Functions for Printing 'lavaan' Outputs |
| lavaan.shiny | Latent Variable Analysis with Shiny |
| lavaanExtra | Convenience Functions for Package 'lavaan' |
| lavaangui | Graphical User Interface with Integrated 'Diagrammer' for 'Lavaan' |
| lavaanPlot | Path Diagrams for 'Lavaan' Models via 'DiagrammeR' |
| lavacreg | Latent Variable Count Regression Models |
| LavaCvxr | Lava Estimation for the Sum of Sparse and Dense Signals(3 Methods) |
| lavaSearch2 | Tools for Model Specification in the Latent Variable Framework |
| Lavash | Lava Estimation for the Sum of Sparse and Dense Signals |
| LAWBL | Latent (Variable) Analysis with Bayesian Learning |
| lawstat | Tools for Biostatistics, Public Policy, and Law |
| lax | Loglikelihood Adjustment for Extreme Value Models |
| lay | Simple but Efficient Rowwise Jobs |
| lazy | Lazy Learning for Local Regression |
| lazyarray | Persistent Large Data Array with Lazy-Loading on Demand |
| lazybar | Progress Bar with Remaining Time Forecast Method |
| lazyData | A LazyData Facility |
| lazyeval | Lazy (Non-Standard) Evaluation |
| lazysf | Delayed Read for 'GDAL' Vector Data Sources |
| lazysql | Lazy SQL Programming |
| lazytrade | Learn Computer and Data Science using Algorithmic Trading |
| lazyWeave | LaTeX Wrappers for R Users |
| lba | Latent Budget Analysis for Compositional Data |
| lbfgs | Limited-memory BFGS Optimization |
| lbfgsb3c | Limited Memory BFGS Minimizer with Bounds on Parameters with optim() 'C' Interface |
| LBI | Likelihood Based Inference |
| lbm | Log Binomial Regression Model in Exact Method |
| lboxcox | Implementation of Logistic Box-Cox Regression |
| LBPG | The Length-Biased Power Garima Distribution |
| lbreg | Log-Binomial Regression with Constrained Optimization |
| LBSPR | Length-Based Spawning Potential Ratio |
| LCA | Localised Co-Dependency Analysis |
| LCAextend | Latent Class Analysis (LCA) with Familial Dependence in Extended Pedigrees |
| lcars | LCARS Aesthetic for Shiny |
| LCAvarsel | Variable Selection for Latent Class Analysis |
| lcc | Longitudinal Concordance Correlation |
| LCCR | Latent Class Capture-Recapture Models |
| lcda | Latent Class Discriminant Analysis |
| LCF | Linear Combination Fitting |
| LCFdata | Data sets for package “LMERConvenienceFunctions” |
| lchemix | A Bayesian Multi-Dimensional Couple-Based Latent Risk Model |
| LCMCR | Bayesian Non-Parametric Latent-Class Capture-Recapture |
| lcmm | Extended Mixed Models Using Latent Classes and Latent Processes |
| LCMSQA | Liquid Chromatography/Mass Spectrometry (LC/MS) Quality Assessment |
| lconnect | Simple Tools to Compute Landscape Connectivity Metrics |
| lcopula | Liouville Copulas |
| lcpm | Ordinal Outcomes: Generalized Linear Models with the Log Link |
| lcra | Bayesian Joint Latent Class and Regression Models |
| lcsm | Univariate and Bivariate Latent Change Score Modelling |
| lctools | Local Correlation, Spatial Inequalities, Geographically Weighted Regression and Other Tools |
| lcyanalysis | Stock Data Analysis Functions |
| lda | Collapsed Gibbs Sampling Methods for Topic Models |
| LDAandLDAS | Linkage Disequilibrium of Ancestry (LDA) and LDA Score (LDAS) |
| LDABiplots | Biplot Graphical Interface for LDA Models |
| LDAcoop | Analysis of Data from Limiting Dilution Assay (LDA) with or without Cellular Cooperation |
| ldamatch | Selection of Statistically Similar Research Groups |
| ldaPrototype | Prototype of Multiple Latent Dirichlet Allocation Runs |
| LDAShiny | User-Friendly Interface for Review of Scientific Literature |
| LDATree | Oblique Classification Trees with Uncorrelated Linear Discriminant Analysis Splits |
| LDATS | Latent Dirichlet Allocation Coupled with Time Series Analyses |
| ldatuning | Tuning of the Latent Dirichlet Allocation Models Parameters |
| LDAvis | Interactive Visualization of Topic Models |
| ldbod | Local Density-Based Outlier Detection |
| ldbounds | Lan-DeMets Method for Group Sequential Boundaries |
| LDcorSV | Linkage Disequilibrium Corrected by the Structure and the Relatedness |
| lddmm | Longitudinal Drift-Diffusion Mixed Models (LDDMM) |
| ldhmm | Hidden Markov Model for Financial Time-Series Based on Lambda Distribution |
| LDlinkR | Calculating Linkage Disequilibrium (LD) in Human Population Groups of Interest |
| LDM | Testing Hypotheses About the Microbiome using the Linear Decomposition Model |
| LDNN | Longitudinal Data Neural Network |
| LDRTools | Tools for Linear Dimension Reduction |
| ldsep | Linkage Disequilibrium Shrinkage Estimation for Polyploids |
| ldsr | Linear Dynamical System Reconstruction |
| ldt | Automated Uncertainty Analysis |
| leabRa | The Artificial Neural Networks Algorithm Leabra |
| leaderCluster | Leader Clustering Algorithm |
| LeafArea | Rapid Digital Image Analysis of Leaf Area |
| leafdown | Provides Drill Down Functionality for 'leaflet' Choropleths |
| leafem | 'leaflet' Extensions for 'mapview' |
| leafgl | High-Performance 'WebGl' Rendering for Package 'leaflet' |
| leaflegend | Add Custom Legends to 'leaflet' Maps |
| leaflet | Create Interactive Web Maps with the JavaScript 'Leaflet' Library |
| leaflet.esri | 'ESRI' Bindings for the 'leaflet' Package |
| leaflet.extras | Extra Functionality for 'leaflet' Package |
| leaflet.extras2 | Extra Functionality for 'leaflet' Package |
| leaflet.minicharts | Mini Charts for Interactive Maps |
| leaflet.providers | Leaflet Providers |
| leafletZH | Chinese Leaflet Map Relate Operation |
| leafpm | Leaflet Map Plugin for Drawing and Editing |
| leafpop | Include Tables, Images and Graphs in Leaflet Pop-Ups |
| leafR | Calculates the Leaf Area Index (LAD) and Other Related Functions |
| leafSTAR | Silhouette to Area Ratio of Tilted Surfaces |
| leafsync | Small Multiples for Leaflet Web Maps |
| leaftime | 'Leaflet-timeline' Plugin for Leaflet |
| leakyIV | Leaky Instrumental Variables |
| leanpubr | 'Leanpub' API Interface |
| leapgp | Localized Ensemble of Approximate Gaussian Processes |
| leapp | Latent Effect Adjustment After Primary Projection |
| leaps | Regression Subset Selection |
| LeArEst | Border and Area Estimation of Data Measured with Additive Error |
| LearnBayes | Functions for Learning Bayesian Inference |
| LearnClust | Learning Hierarchical Clustering Algorithms |
| LearnGeom | Learning Plane Geometry |
| learningr | Data and Functions to Accompany the Book "Learning R" |
| LearningRlab | Statistical Learning Functions |
| LearningStats | Elemental Descriptive and Inferential Statistics |
| learningtower | OECD PISA Datasets from 2000-2018 in an Easy-to-Use Format |
| LearnNonparam | 'R6'-Based Flexible Framework for Permutation Tests |
| LearnPCA | Functions, Data Sets and Vignettes to Aid in Learning Principal Components Analysis (PCA) |
| learnPopGen | Population Genetic Simulations & Numerical Analysis |
| learnr | Interactive Tutorials for R |
| learnrbook | Datasets and Code Examples from P. J. Aphalo's "Learn R" Book |
| LearnSL | Learn Supervised Classification Methods Through Examples and Code |
| LearnVizLMM | Learning and Communicating Linear Mixed Models Without Data |
| leastcostpath | Modelling Pathways and Movement Potential Within a Landscape |
| ledger | Utilities for Importing Data from Plain Text Accounting Files |
| leem | Laboratory of Teaching to Statistics and Mathematics |
| lefko3 | Historical and Ahistorical Population Projection Matrix Analysis |
| legendry | Extended Legends and Axes for 'ggplot2' |
| legion | Forecasting Using Multivariate Models |
| legislatoR | Interface to the Comparative Legislators Database |
| LEGIT | Latent Environmental & Genetic InTeraction (LEGIT) Model |
| legocolors | Official Lego Color Palettes |
| lehdr | Grab Longitudinal Employer-Household Dynamics (LEHD) Flat Files |
| lehuynh | Le-Huynh Truc-Ly's R Code and Templates |
| leiden | R Implementation of Leiden Clustering Algorithm |
| leidenAlg | Implements the Leiden Algorithm via an R Interface |
| leidenbase | R and C/C++ Wrappers to Run the Leiden find_partition() Function |
| leiv | Bivariate Linear Errors-In-Variables Estimation |
| LeMaRns | Length-Based Multispecies Analysis by Numerical Simulation |
| lemna | Lemna Ecotox Effect Model |
| lemon | Freshing Up your 'ggplot2' Plots |
| lenght | Allow Misspellings of Length Function |
| lenses | Elegant Data Manipulation with Lenses |
| leontief | Input-Output Analysis |
| leprechaun | Create Simple 'Shiny' Applications as Packages |
| leptokurticMixture | Implements Parsimonious Finite Mixtures of Multivariate Elliptical Leptokurtic-Normals |
| lero.lero | Generate 'Lero Lero' Quotes |
| less | Learning with Subset Stacking |
| lessR | Less Code, More Results |
| lessSEM | Non-Smooth Regularization for Structural Equation Models |
| lest | Vectorised Nested if-else Statements Similar to CASE WHEN in 'SQL' |
| lestat | A Package for Learning Statistics |
| letsR | Data Handling and Analysis in Macroecology |
| lettervalue | Computing Letter Values |
| levitate | Fuzzy String Comparison |
| LexFindR | Find Related Items and Lexical Dimensions in a Lexicon |
| lexicon | Lexicons for Text Analysis |
| lexiconPT | Lexicons for Portuguese Text Analysis |
| LexisNexisTools | Working with Files from 'LexisNexis' |
| LexisPlotR | Plot Lexis Diagrams for Demographic Purposes |
| lexRankr | Extractive Summarization of Text with the LexRank Algorithm |
| lfactors | Factors with Levels |
| LFApp | Shiny Apps for Lateral Flow Assays |
| lfc | Log Fold Change Distribution Tools for Working with Ratios of Counts |
| lfda | Local Fisher Discriminant Analysis |
| LFDR.MLE | Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation |
| LFDR.MME | Estimating Local False Discovery Rates Using the Method of Moments |
| LFDREmpiricalBayes | Estimating Local False Discovery Rates Using Empirical Bayes Methods |
| lfe | Linear Group Fixed Effects |
| lfl | Linguistic Fuzzy Logic |
| LFM | Laplace Factor Model Analysis and Evaluation |
| lfmm | Latent Factor Mixed Models |
| lfproQC | Quality Control for Label-Free Proteomics Expression Data |
| lfstat | Calculation of Low Flow Statistics for Daily Stream Flow Data |
| lg | Locally Gaussian Distributions: Estimation and Methods |
| lgarch | Simulation and Estimation of Log-GARCH Models |
| lgcp | Log-Gaussian Cox Process |
| LGDtoolkit | Collection of Tools for LGD Rating Model Development |
| LGEWIS | Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Studies |
| lglasso | Longitudinal Graphical Lasso |
| lgpr | Longitudinal Gaussian Process Regression |
| lgr | A Fully Featured Logging Framework |
| lgrdata | Example Datasets for a Learning Guide to R |
| lgrExtra | Extra Appenders for 'lgr' |
| LGRF | Set-Based Tests for Genetic Association in Longitudinal Studies |
| lgtdl | A Set of Methods for Longitudinal Data Objects |
| LHD | Latin Hypercube Designs (LHDs) |
| lhmixr | Fit Sex-Specific Life History Models with Missing Classifications |
| lhs | Latin Hypercube Samples |
| libbib | Various Utilities for Library Science/Assessment and Cataloging |
| libcoin | Linear Test Statistics for Permutation Inference |
| libgeos | Open Source Geometry Engine ('GEOS') C API |
| LiblineaR | Linear Predictive Models Based on the LIBLINEAR C/C++ Library |
| LibOPF | Design of Optimum-Path Forest Classifiers |
| libr | Libraries, Data Dictionaries, and a Data Step for R |
| Libra | Linearized Bregman Algorithms for Generalized Linear Models |
| librarian | Install, Update, Load Packages from CRAN, 'GitHub', and 'Bioconductor' in One Step |
| librarysnapshot | Library Snapshot for Packages and Dependencies in Use by Current Session |
| libstable4u | Stable Distribution Functions...For You |
| LIC | The LIC Criterion for Optimal Subset Selection |
| lidaRtRee | Forest Analysis with Airborne Laser Scanning (LiDAR) Data |
| lidR | Airborne LiDAR Data Manipulation and Visualization for Forestry Applications |
| lievens | Real-Time PCR Data Sets by Lievens et al. (2012) |
| lifecontingencies | Financial and Actuarial Mathematics for Life Contingencies |
| lifecourse | Quantification of Lifecourse Fluidity |
| lifecycle | Manage the Life Cycle of your Package Functions |
| LifeHist | Life History Models of Individuals |
| LifeInsuranceContracts | Framework for Traditional Life Insurance Contracts |
| LifeInsureR | Modelling Traditional Life Insurance Contracts |
| lifelogr | Life Logging |
| LifemapR | Data Visualisation on 'Lifemap' Tree |
| lifeR | Identify Sites for Your Bird List |
| Lifertable | Life and Fertility Tables Specially for Insects |
| LifeTables | Two-Parameter HMD Model Life Table System |
| liftLRD | Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series |
| liftr | Containerize R Markdown Documents for Continuous Reproducibility |
| LiftTest | A Bootstrap Proportion Test for Brand Lift Testing |
| lifx | Control 'LIFX' Smart Light Bulbs |
| lightgbm | Light Gradient Boosting Machine |
| LightLogR | Process Data from Wearable Light Loggers and Optical Radiation Dosimeters |
| LightningR | Tools for Communication with Lightning-Viz Server |
| lightparser | From 'Rmarkdown' and 'Quarto' Files to Tibble and Back |
| lightr | Read Spectrometric Data and Metadata |
| lightsout | Implementation of the 'Lights Out' Puzzle Game |
| likelihood | Methods for Maximum Likelihood Estimation |
| likelihoodAsy | Functions for Likelihood Asymptotics |
| likelihoodExplore | Likelihood Exploration |
| likelihoodR | Likelihood Analyses for Common Statistical Tests |
| likert | Analysis and Visualization Likert Items |
| LikertMakeR | Synthesise and Correlate Likert Scale and Related Rating-Scale Data |
| lilikoi | Metabolomics Personalized Pathway Analysis Tool |
| lillies | Estimation of Life Years Lost |
| LilRhino | For Implementation of Feed Reduction, Learning Examples, NLP and Code Management |
| LIM | Linear Inverse Model Examples and Solution Methods |
| lime | Local Interpretable Model-Agnostic Explanations |
| limexhub | Quantitative Trade Signals |
| liminal | Multivariate Data Visualization with Tours and Embeddings |
| LimnoPalettes | A Limnology Themed Palette Generator |
| limonaid | Working with 'LimeSurvey' Surveys and Responses |
| limorhyde | Differential Analysis of Rhythmic Transcriptome Data |
| limorhyde2 | Quantify Rhythmicity and Differential Rhythmicity in Genomic Data |
| limSolve | Solving Linear Inverse Models |
| lin.eval | Perform Polynomial Evaluation of Linearity |
| linbin | Binning and Plotting of Linearly Referenced Data |
| LinCal | Static Univariate Frequentist and Bayesian Linear Calibration |
| lincom | Linear Biomarker Combination: Empirical Performance Optimization |
| linconGaussR | Sampling Multivariate Normal Distribution under Linear Constraints |
| LindenmayeR | Functions to Explore L-Systems (Lindenmayer Systems) |
| lindia | Automated Linear Regression Diagnostic |
| LindleyPowerSeries | Lindley Power Series Distribution |
| linearModel | Linear Model Functions |
| LinearRegressionMDE | Minimum Distance Estimation in Linear Regression Model |
| lineartestr | Linear Specification Testing |
| linelist | Tagging and Validating Epidemiological Data |
| linelistBayes | Bayesian Analysis of Epidemic Data Using Line List and Case Count Approaches |
| linemap | Line Maps |
| linERR | Linear Excess Relative Risk Model |
| lineup | Lining Up Two Sets of Measurements |
| lineup2 | Lining Up Two Sets of Measurements |
| lineupjs | 'HTMLWidget' Wrapper of 'LineUp' for Visual Analysis of Multi-Attribute Rankings |
| lingdist | Fast Linguistic Distance and Alignment Computation |
| lingglosses | Interlinear Glossed Linguistic Examples and Abbreviation Lists Generation |
| lingmatch | Linguistic Matching and Accommodation |
| lingtypology | Linguistic Typology and Mapping |
| linguisticsdown | Easy Linguistics Document Writing with R Markdown |
| link | Hyperlink Automatic Detection |
| link2GI | Linking Geographic Information Systems, Remote Sensing and Other Command Line Tools |
| Linkage | Clustering Communication Networks Using the Stochastic Topic Block Model Through Linkage.fr |
| LinkageMapView | Plot Linkage Group Maps with Quantitative Trait Loci |
| linkcomm | Tools for Generating, Visualizing, and Analysing Link Communities in Networks |
| LinkedGASP | Linked Emulator of a Coupled System of Simulators |
| linkedInadsR | Access to 'LinkedIn' Ads via the 'Windsor.ai' API |
| LinkedMatrix | Column-Linked and Row-Linked Matrices |
| linkprediction | Link Prediction Methods |
| linkspotter | Bivariate Correlations Calculation and Visualization |
| linl | 'linl' is not 'Letter' |
| linne | Convenient 'CSS' |
| linpk | Generate Concentration-Time Profiles from Linear PK Systems |
| linprog | Linear Programming / Optimization |
| LinRegInteractive | Interactive Interpretation of Linear Regression Models |
| LINselect | Selection of Linear Estimators |
| lintools | Manipulation of Linear Systems of (in)Equalities |
| lintr | A 'Linter' for R Code |
| lipidmapsR | Lipid Maps Rest Service |
| LipidMS | Lipid Annotation for LC-MS/MS DDA or DIA Data |
| lipidomeR | Integrative Visualizations of the Lipidome |
| LipidomicsR | Elegant Tools for Processing and Visualization of Lipidomics Data |
| LipinskiFilters | Computes and Visualize Lipinski's Parameters |
| liqueueR | Implements Queue, PriorityQueue and Stack Classes |
| lira | LInear Regression in Astronomy |
| lisa | Color Palettes from Color Lisa |
| lisrelToR | Import Output from LISREL into R |
| list | Statistical Methods for the Item Count Technique and List Experiment |
| listArray | Incomplete Array with Arbitrary R Objects as Indices |
| listarrays | A Toolbox for Working with R Arrays in a Functional Programming Style |
| listcomp | List Comprehensions |
| listcompr | List Comprehension for R |
| listdown | Create R Markdown from Lists |
| listenv | Environments Behaving (Almost) as Lists |
| LIStest | Tests of independence based on the Longest Increasing Subsequence |
| listr | Tools for Lists |
| listviewer | 'htmlwidget' for Interactive Views of R Lists |
| listWithDefaults | List with Defaults |
| lit | Latent Interaction Testing for Genome-Wide Studies |
| lite | Likelihood-Based Inference for Time Series Extremes |
| litedown | A Lightweight Version of R Markdown |
| liteq | Lightweight Portable Message Queue Using 'SQLite' |
| literanger | Random Forests for Multiple Imputation Based on 'ranger' |
| litRiddle | Dataset and Tools to Research the Riddle of Literary Quality |
| litteR | Litter Analysis |
| litterfitter | Fit a Collection of Curves to Single Cohort Decomposition Data |
| littler | R at the Command-Line via 'r' |
| liureg | Liu Regression with Liu Biasing Parameters and Statistics |
| live | Local Interpretable (Model-Agnostic) Visual Explanations |
| liver | "Eating the Liver of Data Science" |
| ljr | Logistic Joinpoint Regression |
| LKT | Logistic Knowledge Tracing |
| llama | Leveraging Learning to Automatically Manage Algorithms |
| llbayesireg | The L-Logistic Bayesian Regression |
| LLM | Logit Leaf Model Classifier for Binary Classification |
| LLMR | Interface for Large Language Model APIs in R |
| llogistic | The L-Logistic Distribution |
| LLSR | Data Analysis of Liquid-Liquid Systems using R |
| lm.beta | Add Standardized Regression Coefficients to Linear-Model-Objects |
| lm.br | Linear Model with Breakpoint |
| lmap | Logistic Mapping |
| lmboot | Bootstrap in Linear Models |
| LMD | A Self-Adaptive Approach for Demodulating Multi-Component Signal |
| lmDiallel | Linear Fixed/Mixed Effects Models for Diallel Crosses |
| lmds | Landmark Multi-Dimensional Scaling |
| lme4 | Linear Mixed-Effects Models using 'Eigen' and S4 |
| lme4breeding | Relationship-Based Mixed-Effects Models |
| lmeInfo | Information Matrices for 'lmeStruct' and 'glsStruct' Objects |
| LMERConvenienceFunctions | Model Selection and Post-Hoc Analysis for (G)LMER Models |
| lmeresampler | Bootstrap Methods for Nested Linear Mixed-Effects Models |
| lmerPerm | Perform Permutation Test on General Linear and Mixed Linear Regression |
| lmerTest | Tests in Linear Mixed Effects Models |
| lmeSplines | Add Smoothing Spline Modelling Capability to 'nlme' |
| LMest | Generalized Latent Markov Models |
| lmf | Functions for Estimation and Inference of Selection in Age-Structured Populations |
| LMfilteR | Filter Methods for Parameter Estimation in Linear and Non Linear Regression Models |
| lmfor | Functions for Forest Biometrics |
| lmForc | Linear Model Forecasting |
| lmhelprs | Helper Functions for Linear Model Analysis |
| lmls | Gaussian Location-Scale Regression |
| lmm | Linear Mixed Models |
| LMMELSM | Fit Latent Multivariate Mixed Effects Location Scale Models |
| lmmot | Multiple Ordinal Tobit (MOT) Model |
| lmmpar | Parallel Linear Mixed Model |
| LMMsolver | Linear Mixed Model Solver |
| LMMstar | Repeated Measurement Models for Discrete Times |
| LMN | Inference for Linear Models with Nuisance Parameters |
| lmodel2 | Model II Regression |
| LMoFit | Advanced L-Moment Fitting of Distributions |
| lmom | L-Moments |
| lmomco | L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments, and Many Distributions |
| Lmoments | L-Moments and Quantile Mixtures |
| lmomPi | (Precipitation) Frequency Analysis and Variability with L-Moments from 'lmom' |
| lmomRFA | Regional Frequency Analysis using L-Moments |
| LMPdata | Easy Import of the EU Labour Market Policy Data |
| lmPerm | Permutation Tests for Linear Models |
| lmQCM | An Algorithm for Gene Co-Expression Analysis |
| lmreg | Data and Functions Used in Linear Models and Regression with R: An Integrated Approach |
| lmridge | Linear Ridge Regression with Ridge Penalty and Ridge Statistics |
| lmSubsets | Exact Variable-Subset Selection in Linear Regression |
| lmtest | Testing Linear Regression Models |
| lmtestrob | Outlier Robust Specification Testing |
| lmtp | Non-Parametric Causal Effects of Feasible Interventions Based on Modified Treatment Policies |
| lmviz | A Package to Visualize Linear Models Features and Play with Them |
| lmw | Linear Model Weights |
| lncDIFF | Long Non-Coding RNA Differential Expression Analysis |
| LncFinder | LncRNA Identification and Analysis Using Heterologous Features |
| LncPath | Identifying the Pathways Regulated by LncRNA Sets of Interest |
| LNIRT | LogNormal Response Time Item Response Theory Models |
| lnmCluster | Perform Logistic Normal Multinomial Clustering for Microbiome Compositional Data |
| lnmixsurv | Bayesian Mixture Log-Normal Survival Model |
| LNPar | Estimation and Testing for a Lognormal-Pareto Mixture |
| loa | Lattice Options and Add-Ins |
| loadeR | Load Data for Analysis System |
| loadings | Loadings for Principal Component Analysis and Partial Least Squares |
| loadshaper | Producing Load Shape with Target Peak and Load Factor |
| LoBrA | Generalized Spline Mixed Effect Models for Longitudinal Breath Data |
| LobsterCatch | Models the Capture Processes in American Lobster Trap Fishery |
| lobstr | Visualize R Data Structures with Trees |
| localboot | Local Bootstrap Methods for Various Networks |
| LocalControl | Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence |
| LocalCop | Local Likelihood Inference for Conditional Copula Models |
| localFDA | Localization Processes for Functional Data Analysis |
| localgauss | Estimating Local Gaussian Parameters |
| localICE | Local Individual Conditional Expectation |
| localIV | Estimation of Marginal Treatment Effects using Local Instrumental Variables |
| localModel | LIME-Based Explanations with Interpretable Inputs Based on Ceteris Paribus Profiles |
| localScore | Package for Sequence Analysis by Local Score |
| localsolver | R API to LocalSolver |
| locaR | A Set of Tools for Sound Localization |
| locateip | Locate IP Addresses with 'ip-api' |
| locatexec | Detection and Localization of Executable Files |
| locationgamer | Identification of Location Game Equilibria in Networks |
| LocaTT | Geographically-Conscious Taxonomic Assignment for Metabarcoding |
| locfdr | Computes Local False Discovery Rates |
| locfit | Local Regression, Likelihood and Density Estimation |
| locits | Test of Stationarity and Localized Autocovariance |
| Lock5Data | Datasets for "Statistics: UnLocking the Power of Data" |
| LocKer | Locally Sparse Estimator of Generalized Varying Coefficient Model for Asynchronous Longitudinal Data |
| locpol | Kernel Local Polynomial Regression |
| locpolExpectile | Local Polynomial Expectile Regression |
| locStra | Fast Implementation of (Local) Population Stratification Methods |
| LOCUS | Low-Rank Decomposition of Brain Connectivity Matrices with Uniform Sparsity |
| locuszoomr | Gene Locus Plot with Gene Annotations |
| loder | Dependency-Free Access to PNG Image Files |
| lodGWAS | Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection |
| lodi | Limit of Detection Imputation for Single-Pollutant Models |
| lodr | Linear Model Fitting with LOD Covariates |
| loedata | Data Sets from "Lectures on Econometrics" by Chirok Han |
| loewesadditivity | Loewe's Additivity |
| lofifonts | Text Rendering with Bitmap and Vector Fonts |
| log | Record Events and Issues |
| log4r | A Fast and Lightweight Logging System for R, Based on 'log4j' |
| LOGAN | Log File Analysis in International Large-Scale Assessments |
| logbin | Relative Risk Regression Using the Log-Binomial Model |
| LogConcDEAD | Log-Concave Density Estimation in Arbitrary Dimensions |
| logconcens | Maximum Likelihood Estimation of a Log-Concave Density Based on Censored Data |
| logcondens | Estimate a Log-Concave Probability Density from Iid Observations |
| logcondiscr | Estimate a Log-Concave Probability Mass Function from Discrete i.i.d. Observations |
| logger | A Lightweight, Modern and Flexible Logging Utility |
| logging | R Logging Package |
| loggit | Modern Logging for the R Ecosystem |
| loggit2 | Easy-to-Use, Dependencyless Logger |
| logib | Salary Analysis by the Swiss Federal Office for Gender Equality |
| logiBin | Binning Variables to Use in Logistic Regression |
| logicDT | Identifying Interactions Between Binary Predictors |
| LogicForest | Logic Forest |
| LogicReg | Logic Regression |
| logihist | Combined Graphs for Logistic Regression |
| login | 'shiny' Login Module |
| logistf | Firth's Bias-Reduced Logistic Regression |
| logistic4p | Logistic Regression with Misclassification in Dependent Variables |
| LogisticCopula | A Copula Based Extension of Logistic Regression |
| LogisticCurveFitting | Logistic Curve Fitting by Rhodes Method |
| logisticPCA | Binary Dimensionality Reduction |
| LogisticRCI | Linear and Logistic Regression-Based Reliable Change Index |
| logisticRR | Adjusted Relative Risk from Logistic Regression |
| logitFD | Functional Principal Components Logistic Regression |
| logitnorm | Functions for the Logitnormal Distribution |
| logitr | Logit Models w/Preference & WTP Space Utility Parameterizations |
| logKDE | Computing Log-Transformed Kernel Density Estimates for Positive Data |
| loglognorm | Double Log Normal Distribution Functions |
| logmult | Log-Multiplicative Models, Including Association Models |
| lognorm | Functions for the Lognormal Distribution |
| logNormReg | log Normal Linear Regression |
| logOfGamma | Natural Logarithms of the Gamma Function for Large Values |
| logr | Creates Log Files |
| LogRegEquiv | Logistic Regression Equivalence |
| logrx | A Logging Utility Focus on Clinical Trial Programming Workflows |
| logspline | Routines for Logspline Density Estimation |
| lokern | Kernel Regression Smoothing with Local or Global Plug-in Bandwidth |
| lolliplot | Plot Variants and Somatic Mutations |
| lolog | Latent Order Logistic Graph Models |
| lolR | Linear Optimal Low-Rank Projection |
| LOMAR | Localization Microscopy Data Analysis |
| lomb | Lomb-Scargle Periodogram |
| long2lstmarray | Longitudinal Dataframes into Arrays for Machine Learning Training |
| LongCART | Recursive Partitioning for Longitudinal Data and Right Censored Data Using Baseline Covariates |
| longclust | Model-Based Clustering and Classification for Longitudinal Data |
| LongDat | A Tool for 'Covariate'-Sensitive Longitudinal Analysis on 'omics' Data |
| longevity | Statistical Methods for the Analysis of Excess Lifetimes |
| longit | High Dimensional Longitudinal Data Analysis Using MCMC |
| longitudinal | Analysis of Multiple Time Course Data |
| longitudinalANAL | Longitudinal Data Analysis |
| longitudinalcascade | Longitudinal Cascade |
| longitudinalData | Longitudinal Data |
| LongituRF | Random Forests for Longitudinal Data |
| longke | Nonparametric Predictive Model for Sparse and Irregular Longitudinal Data |
| longmemo | Statistics for Long-Memory Processes (Book Jan Beran), and Related Functionality |
| LongMemoryTS | Long Memory Time Series |
| longmixr | Longitudinal Consensus Clustering with 'flexmix' |
| longpower | Sample Size Calculations for Longitudinal Data |
| longreadvqs | Viral Quasispecies Comparison from Long-Read Sequencing Data |
| longROC | Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio Markers or Scores |
| longRPart2 | Recursive Partitioning of Longitudinal Data |
| longsurr | Longitudinal Surrogate Marker Analysis |
| longurl | Expand Short 'URLs' |
| loo | Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models |
| lookout | Leave One Out Kernel Density Estimates for Outlier Detection |
| lookup | Functions Similar to VLOOKUP in Excel |
| lookupTable | Look-Up Tables using S4 |
| loon | Interactive Statistical Data Visualization |
| loon.data | Data Used to Illustrate 'Loon' Functionality |
| loon.ggplot | A Grammar of Interactive Graphics |
| loon.shiny | Automatically Create a 'Shiny' App Based on Interactive 'Loon' Widgets |
| loon.tourr | Tour in 'Loon' |
| LoopAnalyst | A Collection of Tools to Conduct Levins' Loop Analysis |
| LoopDetectR | Comprehensive Feedback Loop Detection in ODE Models |
| LoopRig | Integration and Analysis of Chromatin Loop Data |
| LOPART | Labeled Optimal Partitioning |
| lorad | Lowest Radial Distance Method of Marginal Likelihood Estimation |
| lordif | Logistic Ordinal Regression Differential Item Functioning using IRT |
| lorec | LOw Rand and sparsE Covariance matrix estimation |
| lorem | Generate Lorem Ipsum Text |
| lorentz | The Lorentz Transform in Relativistic Physics |
| lorenz | Tools for Deriving Income Inequality Estimates from Grouped Income Data |
| LorenzRegression | Lorenz and Penalized Lorenz Regressions |
| lori | Imputation of High-Dimensional Count Data using Side Information |
| LorMe | Lightening One-Code Resolving Microbial Ecology Solution |
| LOST | Missing Morphometric Data Simulation and Estimation |
| lotri | A Simple Way to Specify Symmetric, Block Diagonal Matrices |
| lotterybr | Lottery Datasets from Caixa Economica Federal |
| lovecraftr | A Collection of Lovecraftian Tales and Texts |
| lowmemtkmeans | Low Memory Use Trimmed K-Means |
| lowpassFilter | Lowpass Filtering |
| LowRankQP | Low Rank Quadratic Programming |
| LowWAFOMNX | Low WAFOM Niederreiter-Xing Sequence |
| LowWAFOMSobol | Low WAFOM Sobol Sequence |
| lpacf | Local Partial Autocorrelation Function Estimation for Locally Stationary Wavelet Processes |
| LPBkg | Detecting New Signals under Background Mismodelling |
| lpc | Lassoed Principal Components for Testing Significance of Features |
| lpcde | Boundary Adaptive Local Polynomial Conditional Density Estimator |
| LPCM | Local Principal Curve Methods |
| lpda | Linear Programming Discriminant Analysis |
| lpdensity | Local Polynomial Density Estimation and Inference |
| LPDynR | Land Productivity Dynamics Indicator |
| LPGraph | Nonparametric Smoothing of Laplacian Graph Spectra |
| lphom | Ecological Inference by Linear Programming under Homogeneity |
| lpint | Local Polynomial Estimators of the Intensity Function and Its Derivatives |
| lpirfs | Local Projections Impulse Response Functions |
| LPKsample | LP Nonparametric High Dimensional K-Sample Comparison |
| lpl | Local Partial Likelihood Estimation and Simultaneous Confidence Band |
| LPM | Linear Parametric Models Applied to Hydrological Series |
| LPmerge | Merging Linkage Maps by Linear Programming |
| LPower | Calculates Power, Sample Size, or Detectable Effect for Longitudinal Analyses |
| LPRelevance | Relevance-Integrated Statistical Inference Engine |
| lpridge | Local Polynomial (Ridge) Regression |
| LPS | Linear Predictor Score, for Binary Inference from Multiple Continuous Variables |
| LPsmooth | LP Smoothed Inference and Graphics |
| lpSolve | Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs |
| lpSolveAPI | R Interface to 'lp_solve' Version 5.5.2.0 |
| LPWC | Lag Penalized Weighted Correlation for Time Series Clustering |
| LqG | Robust Group Variable Screening Based on Maximum Lq-Likelihood Estimation |
| lqmix | Linear Quantile Mixture Models |
| lqmm | Linear Quantile Mixed Models |
| lqr | Robust Linear Quantile Regression |
| LRcontrast | Dose Response Signal Detection under Model Uncertainty |
| lrd | A Package for Processing Lexical Response Data |
| LREP | Estimate and Test Exponential vs. Pareto Distributions |
| lrequire | Sources an R "Module" with Caching & Encapsulation, Returning Exported Vars |
| lrgs | Linear Regression by Gibbs Sampling |
| lrmest | Different Types of Estimators to Deal with Multicollinearity |
| LRMF3 | Low Rank Matrix Factorization S3 Objects |
| lrstat | Power and Sample Size Calculation for Non-Proportional Hazards and Beyond |
| LRTesteR | Likelihood Ratio Tests and Confidence Intervals |
| LS2W | Locally Stationary Two-Dimensional Wavelet Process Estimation Scheme |
| LS2Wstat | A Multiscale Test of Spatial Stationarity for LS2W Processes |
| lsa | Latent Semantic Analysis |
| LSAfun | Applied Latent Semantic Analysis (LSA) Functions |
| LSAmitR | Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit R' |
| lsasim | Functions to Facilitate the Simulation of Large Scale Assessment Data |
| lsbclust | Least-Squares Bilinear Clustering for Three-Way Data |
| lsbs | Bandwidth Selection for Level Sets and HDR Estimation |
| LSD | Lots of Superior Depictions |
| lsdbc | Locally Scaled Density Based Clustering |
| LSDinterface | Interface Tools for LSD Simulation Results Files |
| LSDirf | Impulse-Response Function Analysis for Agent-Based Models |
| LSDsensitivity | Sensitivity Analysis Tools for LSD Simulations |
| LSE | Constrained Least Squares and Generalized QR Factorization |
| LSEbootLS | Bootstrap Methods for Regression Models with Locally Stationary Errors |
| lsei | Solving Least Squares or Quadratic Programming Problems under Equality/Inequality Constraints |
| lsirm12pl | Latent Space Item Response Model |
| lsl | Latent Structure Learning |
| lslx | Semi-Confirmatory Structural Equation Modeling via Penalized Likelihood or Least Squares |
| lsm | Estimation of the log Likelihood of the Saturated Model |
| lsmeans | Least-Squares Means |
| LSMonteCarlo | American options pricing with Least Squares Monte Carlo method |
| LSMRealOptions | Value American and Real Options Through LSM Simulation |
| lsnstat | 'La Societe Nouvelle' API Access |
| lspartition | Nonparametric Estimation and Inference Procedures using Partitioning-Based Least Squares Regression |
| LSPFP | Lysate and Secretome Peptide Feature Plotter |
| lspline | Linear Splines with Convenient Parametrisations |
| lspls | LS-PLS Models |
| lsr | Companion to "Learning Statistics with R" |
| LSRS | Land Surface Remote Sensing |
| lss2 | The Accelerated Failure Time Model to Right Censored Data Based on Least-Squares Principle |
| LST | Land Surface Temperature Retrieval for Landsat 8 |
| LSTbook | Data and Software for "Lessons in Statistical Thinking" |
| LSTS | Locally Stationary Time Series |
| LSVAR | Estimation of Low Rank Plus Sparse Structured Vector Auto-Regressive (VAR) Model |
| LSWPlib | Simulation and Spectral Estimation of Locally Stationary Wavelet Packet Processes |
| LSX | Semi-Supervised Algorithm for Document Scaling |
| ltable | Easy to Make (Lazy) Tables |
| LTAR | Tensor Forecasting Functions |
| LTASR | Functions to Replicate the Center for Disease Control and Prevention's 'LTAS' Software in R |
| LTCDM | Latent Transition Cognitive Diagnosis Model with Covariates |
| lterdatasampler | Educational Dataset Examples from the Long Term Ecological Research Program |
| lterpalettefinder | Extract Color Palettes from Photos and Pick Official LTER Palettes |
| ltertools | Tools Developed by the Long Term Ecological Research Community |
| LTFHPlus | Implementation of LT-FH++ |
| ltm | Latent Trait Models under IRT |
| ltmix | Left-Truncated Mixtures of Gamma, Weibull, and Lognormal Distributions |
| ltmle | Longitudinal Targeted Maximum Likelihood Estimation |
| LTPDvar | LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables |
| LTRCforests | Ensemble Methods for Survival Data with Time-Varying Covariates |
| LTRCtrees | Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data |
| ltsa | Linear Time Series Analysis |
| ltsk | Local Time Space Kriging |
| ltsspca | Sparse Principal Component Based on Least Trimmed Squares |
| ltxsparklines | Lightweight Sparklines for a LaTeX Document |
| luajr | 'LuaJIT' Scripting |
| lubridate | Make Dealing with Dates a Little Easier |
| lubrilog | Get Insights on 'lubridate' Operations |
| luca | Likelihood Inference from Case-Control Data under Covariate Assumptions |
| lucas | Package to Download and Create the DB of LUCAS Data Harmonized |
| lucid | Printing Floating Point Numbers in a Human-Friendly Format |
| LUCIDus | LUCID with Multiple Omics Data |
| ludic | Linkage Using Diagnosis Codes |
| lue | Light Use Efficiency Model to Estimate Biomass and YIELD with and Without Vapour Pressure Deficit |
| lulab.utils | Supporting Functions Maintained by Zhen Lu |
| lulcc | Land Use Change Modelling in R |
| lumberjack | Track Changes in Data |
| Luminescence | Comprehensive Luminescence Dating Data Analysis |
| lunar | Calculate Lunar Phase & Distance, Seasons and Related Environmental Factors |
| lutz | Look Up Time Zones of Point Coordinates |
| luz | Higher Level 'API' for 'torch' |
| luzlogr | Lightweight Logging for R Scripts |
| LVGP | Latent Variable Gaussian Process Modeling with Qualitative and Quantitative Input Variables |
| lvmcomp | Stochastic EM Algorithms for Latent Variable Models with a High-Dimensional Latent Space |
| lvmisc | Veras Miscellaneous |
| lvnet | Latent Variable Network Modeling |
| lvplot | Letter Value 'Boxplots' |
| LW1949 | An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949) |
| lwc2022 | Langa-Weir Classification of Cognitive Function for 2022 HRS Data |
| LWFBrook90R | Simulate Evapotranspiration and Soil Moisture with the SVAT Model LWF-Brook90 |
| lwgeom | Bindings to Selected 'liblwgeom' Functions for Simple Features |
| lwqs | Lagged Weighted Quantile Sum Regression |
| LZeroSpikeInference | Exact Spike Train Inference via L0 Optimization |
| lzstring | Wrapper for 'lz-string' 'C++' Library |
| m2b | Movement to Behaviour Inference using Random Forest |
| m2r | Interface to 'Macaulay2' |
| M2SMF | Multi-Modal Similarity Matrix Factorization for Integrative Multi-Omics Data Analysis |
| M2SMJF | Multi-Modal Similarity Matrix Joint Factorization |
| M3 | Reading M3 Files |
| M3JF | Multi-Modal Matrix Joint Factorization for Integrative Multi-Omics Data Analysis |
| m5 | 'M5 Forecasting' Challenges Data |
| m61r | Package About Data Manipulation in Pure Base R |
| MAAPER | Analysis of Alternative Polyadenylation Using 3' End-Linked Reads |
| maat | Multiple Administrations Adaptive Testing |
| mabacR | Assisting Decision Makers |
| mable | Maximum Approximate Bernstein/Beta Likelihood Estimation |
| MABOUST | Multi-Armed Bayesian Ordinal Utility-Based Sequential Trial |
| MacBehaviour | Behavioural Studies of Large Language Models |
| macc | Mediation Analysis of Causality under Confounding |
| MACER | Molecular Acquisition, Cleaning, and Evaluation in R 'MACER' |
| MachineShop | Machine Learning Models and Tools |
| macleish | Retrieve Data from MacLeish Field Station |
| maclogp | Measures of Uncertainty for Model Selection |
| macroBiome | A Tool for Mapping the Distribution of the Biomes and Bioclimate |
| macrocol | Colombian Macro-Financial Time Series Generator |
| macrosyntR | Draw Ordered Oxford Grids and Chord Diagrams |
| MacroZooBenthosWaterA | Fresh Water Quality Analysis Based on Macrozoobenthos |
| mactivate | Multiplicative Activation |
| maczic | Mediation Analysis for Count and Zero-Inflated Count Data |
| MAd | Meta-Analysis with Mean Differences |
| mada | Meta-Analysis of Diagnostic Accuracy |
| MadanText | Persian Text Mining Tool for Frequency Analysis, Statistical Analysis, and Word Clouds |
| MadanTextNetwork | Persian Text Mining Tool for Co-Occurrence Network |
| maddison | The Maddison Project Database |
| madgrad | 'MADGRAD' Method for Stochastic Optimization |
| maditr | Fast Data Aggregation, Modification, and Filtering with Pipes and 'data.table' |
| madness | Automatic Differentiation of Multivariate Operations |
| MADPop | MHC Allele-Based Differencing Between Populations |
| madr | Model Averaged Double Robust Estimation |
| madrat | May All Data be Reproducible and Transparent (MADRaT) * |
| madshapR | Support Technical Processes Following 'Maelstrom Research' Standards |
| madsim | A Flexible Microarray Data Simulation Model |
| maestro | Orchestration of Data Pipelines |
| Maeswrap | Wrapper Functions for MAESTRA/MAESPA |
| mafR | Interface for Masked Autoregressive Flows |
| magclass | Data Class and Tools for Handling Spatial-Temporal Data |
| MAGEE | Mixed Model Association Test for GEne-Environment Interaction |
| magi | MAnifold-Constrained Gaussian Process Inference |
| magic | Create and Investigate Magic Squares |
| magicaxis | Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick Support |
| magicfor | Magic Functions to Obtain Results from for Loops |
| magick | Advanced Graphics and Image-Processing in R |
| magickGUI | GUI Tools for Interactive Image Processing with 'magick' |
| magicLamp | 'WeMo Switch' Smart Plug Utilities |
| MAGMA.R | MAny-Group MAtching |
| MagmaClustR | Clustering and Prediction using Multi-Task Gaussian Processes with Common Mean |
| magmaR | R-Client for Interacting with the 'UCSF Data Library' |
| MAGNAMWAR | A Pipeline for Meta-Genome Wide Association |
| magree | Implements the O'Connell-Dobson-Schouten Estimators of Agreement for Multiple Observers |
| magrittr | A Forward-Pipe Operator for R |
| maGUI | A Graphical User Interface for Microarray Data Analysis and Annotation |
| maic | Matching-Adjusted Indirect Comparison |
| maicChecks | Assessing the Numerical Feasibility for Conducting a Matching-Adjusted Indirect Comparison (MAIC) |
| maicplus | Matching Adjusted Indirect Comparison |
| mailchimpR | Get Mailchimp Data via the 'Windsor.ai' API |
| mailmerge | Mail Merge Using R Markdown Documents and 'gmailr' |
| mailR | A Utility to Send Emails from R |
| mailtoR | Creates a Friendly User Interface for Emails Sending in 'shiny' |
| MainExistingDatasets | Main Existing Human Datasets |
| MAINT.Data | Model and Analyse Interval Data |
| MajKMeans | k-Means Algorithm with a Majorization-Minimization Method |
| MajMinKmeans | k-Means Algorithm with a Majorization-Minimization Method |
| makedummies | Create Dummy Variables from Categorical Data |
| MakefileR | Create 'Makefiles' Using R |
| makeFlow | Visualizing Sequential Classifications |
| makeit | Run R Scripts if Needed |
| makemyprior | Intuitive Construction of Joint Priors for Variance Parameters |
| makePalette | Make Palette |
| makepipe | Pipeline Tools Inspired by 'GNU Make' |
| makeProject | Creates an empty package framework for the LCFD format |
| maketools | Exploring and Testing the Toolchain and System Libraries |
| makeunique | Make Character Strings Unique |
| MAKL | Multiple Approximate Kernel Learning (MAKL) |
| malan | MAle Lineage ANalysis |
| malani | Machine Learning Assisted Network Inference |
| malariaAtlas | An R Interface to Open-Access Malaria Data, Hosted by the 'Malaria Atlas Project' |
| malaytextr | Text Mining for Bahasa Malaysia |
| MALDIcellassay | Automated MALDI Cell Assays Using Dose-Response Curve Fitting |
| maldipickr | Dereplicate and Cherry-Pick Mass Spectrometry Spectra |
| MALDIquant | Quantitative Analysis of Mass Spectrometry Data |
| MALDIquantForeign | Import/Export Routines for 'MALDIquant' |
| MALDIrppa | MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis |
| mall | Run Multiple Large Language Model Predictions Against a Table, or Vectors |
| mallet | An R Wrapper for the Java Mallet Topic Modeling Toolkit |
| malvinas | Islas Malvinas, Georgias Del Sur y Sándwich Del Sur |
| MAMS | Designing Multi-Arm Multi-Stage Studies |
| ManagedCloudProvider | Providing the Kubernetes-Like Functions for the Non-Kubernetes Cloud Service |
| managelocalrepo | Manage a CRAN-Style Local Repository |
| MANCIE | Matrix Analysis and Normalization by Concordant Information Enhancement |
| mand | Multivariate Analysis for Neuroimaging Data |
| MandalaR | Building Mandalas from Parametric Equations of Classical Curves |
| mandelbrot | Generates Views on the Mandelbrot Set |
| manet | Multiple Allocation Model for Actor-Event Networks |
| Mangrove | Risk Prediction on Trees |
| manhattanly | Interactive Q-Q and Manhattan Plots Using 'plotly.js' |
| manhplot | The Manhattan++ Plot |
| manifestoR | Access and Process Data and Documents of the Manifesto Project |
| manifold | Operations for Riemannian Manifolds |
| ManifoldOptim | An R Interface to the 'ROPTLIB' Library for Riemannian Manifold Optimization |
| manipulate | Interactive Plots for RStudio |
| manipulateWidget | Add Even More Interactivity to Interactive Charts |
| ManlyMix | Manly Mixture Modeling and Model-Based Clustering |
| MAnorm2 | Tools for Normalizing and Comparing ChIP-seq Samples |
| MANOVA.RM | Resampling-Based Analysis of Multivariate Data and Repeated Measures Designs |
| manta | Multivariate Asymptotic Non-Parametric Test of Association |
| MantaID | A Machine-Learning Based Tool to Automate the Identification of Biological Database IDs |
| manydata | A Portal for Global Governance Data |
| manymodelr | Build and Tune Several Models |
| manymome | Mediation, Moderation and Moderated-Mediation After Model Fitting |
| manymome.table | Publication-Ready Tables for 'manymome' Results |
| manynet | Many Ways to Make, Modify, Map, Mark, and Measure Myriad Networks |
| ManyTests | Multiple Testing Procedures of Cox (2011) and Wong and Cox (2007) |
| MaOEA | Many Objective Evolutionary Algorithm |
| maotai | Tools for Matrix Algebra, Optimization and Inference |
| MAP | Multimodal Automated Phenotyping |
| Map2NCBI | Mapping Markers to the Nearest Genomic Feature |
| MAPA | Multiple Aggregation Prediction Algorithm |
| mapaccuracy | Unbiased Thematic Map Accuracy and Area |
| mapbayr | MAP-Bayesian Estimation of PK Parameters |
| mapboxapi | R Interface to 'Mapbox' Web Services |
| mapboxer | An R Interface to 'Mapbox GL JS' |
| mapcan | Tools for Plotting Canadian Choropleth Maps and Choropleth Alternatives |
| mapchina | China Administrative Divisions Geospatial Shapefile Data |
| mapdata | Extra Map Databases |
| mapdeck | Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl' |
| mapedit | Interactive Editing of Spatial Data in R |
| mapfit | PH/MAP Parameter Estimation |
| MapGAM | Mapping Smoothed Effect Estimates from Individual-Level Data |
| mapgl | Interactive Maps with 'Mapbox GL JS' and 'MapLibre GL JS' |
| mapi | Mapping Averaged Pairwise Information |
| mapindia | Plot Map of the Indian Subcontinent |
| mapindiatools | Mapping Data for 'mapindia' Package |
| Mapinguari | Process-Based Biogeographical Analysis |
| mapiso | Create Contour Polygons from Regular Grids |
| MAPITR | MArginal ePIstasis Test for Regions |
| maplegend | Legends for Maps |
| mapme.biodiversity | Efficient Monitoring of Global Biodiversity Portfolios |
| mapmisc | Utilities for Producing Maps |
| mapmixture | Spatial Visualisation of Admixture on a Projected Map |
| mappeR | Construct and Visualize TDA Mapper Graphs |
| MapperAlgo | Topological Data Analysis: Mapper Algorithm |
| mapping | Automatic Download, Linking, Manipulating Coordinates for Maps |
| mappings | Functions for Transforming Categorical Variables |
| mapplots | Data Visualisation on Maps |
| mappoly | Genetic Linkage Maps in Autopolyploids |
| mappp | Map in Parallel with Progress |
| mapproj | Map Projections |
| maps | Draw Geographical Maps |
| mapsapi | 'sf'-Compatible Interface to 'Google Maps' APIs |
| mapscanner | Print Maps, Draw on Them, Scan Them Back in |
| mapsf | Thematic Cartography |
| mapsFinland | Maps of Finland |
| mapSpain | Administrative Boundaries of Spain |
| mapsPERU | Maps of Peru |
| mapsRinteractive | Local Adaptation and Evaluation of Raster Maps |
| mapStats | Geographic Display of Survey Data Statistics |
| maptiles | Download and Display Map Tiles |
| maptpx | MAP Estimation of Topic Models |
| maptree | Mapping, Pruning, and Graphing Tree Models |
| mapview | Interactive Viewing of Spatial Data in R |
| maq | Multi-Armed Qini |
| mAr | Multivariate AutoRegressive Analysis |
| mar1s | Multiplicative AR(1) with Seasonal Processes |
| marble | Robust Marginal Bayesian Variable Selection for Gene-Environment Interactions |
| march | Markov Chains |
| marcher | Migration and Range Change Estimation in R |
| marelac | Tools for Aquatic Sciences |
| MareyMap | Estimation of Meiotic Recombination Rates Using Marey Maps |
| marg | Approximate Marginal Inference for Regression-Scale Models |
| margaret | Scientometric Analysis Minciencias |
| MargCond | Joint Marginal-Conditional Model |
| marginaleffects | Predictions, Comparisons, Slopes, Marginal Means, and Hypothesis Tests |
| marginalizedRisk | Estimating Marginalized Risk |
| MarginalMediation | Marginal Mediation |
| margins | Marginal Effects for Model Objects |
| marima | Multivariate ARIMA and ARIMA-X Analysis |
| mark | Miscellaneous, Analytic R Kernels |
| markdown | Render Markdown with 'commonmark' |
| markdownInput | Shiny Module for a Markdown Input with Result Preview |
| marked | Mark-Recapture Analysis for Survival and Abundance Estimation |
| markerpen | Marker Gene Detection via Penalized Principal Component Analysis |
| MarketMatching | Market Matching and Causal Impact Inference |
| marketr | Tidy Calculation of Marketing Metrics Plus Quick Analysis |
| markets | Estimation Methods for Markets in Equilibrium and Disequilibrium |
| markmyassignment | Automatic Marking of R Assignments |
| markophylo | Markov Chain Models for Phylogenetic Trees |
| markovchain | Easy Handling Discrete Time Markov Chains |
| Markovchart | Markov Chain-Based Cost-Optimal Control Charts |
| markovmix | Mixture of Markov Chains with Support of Higher Orders and Multiple Sequences |
| markovMSM | Methods for Checking the Markov Condition in Multi-State Survival Data |
| markowitz | Markowitz Criterion |
| MarkowitzR | Statistical Significance of the Markowitz Portfolio |
| marlod | Marginal Modeling for Exposure Data with Values Below the LOD |
| marmap | Import, Plot and Analyze Bathymetric and Topographic Data |
| MARMoT | Matching on Poset-Based Average Rank for Multiple Treatments (MARMoT) |
| marp | Model-Averaged Renewal Process |
| marqLevAlg | A Parallelized General-Purpose Optimization Based on Marquardt-Levenberg Algorithm |
| marquee | Markdown Parser and Renderer for R Graphics |
| marradistrees | Plots a Tree-Like Representation of a Numerical Variable (Marradi's Tree) |
| MARSANNhybrid | MARS Based ANN Hybrid Model |
| MARSGWR | A Hybrid Spatial Model for Capturing Spatially Varying Relationships Between Variables in the Data |
| MARSS | Multivariate Autoregressive State-Space Modeling |
| MARSSVRhybrid | MARS SVR Hybrid |
| MARVEL | Revealing Splicing Dynamics at Single-Cell Resolution |
| MarZIC | Marginal Mediation Effects with Zero-Inflated Compositional Mediator |
| mas | Marker Association Studies |
| maSAE | Mandallaz' Model-Assisted Small Area Estimators |
| mase | Model-Assisted Survey Estimators |
| mashr | Multivariate Adaptive Shrinkage |
| maskr | Visual Class for Vectors with Non-Publishing Requirements |
| maskRangeR | Mask Species Geographic Ranges |
| MASS | Support Functions and Datasets for Venables and Ripley's MASS |
| masscor | Mass Measurement Corrections |
| MASSExtra | Some 'MASS' Enhancements |
| Massign | Simple Matrix Construction |
| massiveGST | Competitive Gene Sets Test with the Mann-Whitney-Wilcoxon Test |
| MASSTIMATE | Body Mass Estimation Equations for Vertebrates |
| MassWateR | Quality Control and Analysis of Massachusetts Water Quality Data |
| mastif | Mast Inference and Forecasting |
| MAT | Multidimensional Adaptive Testing |
| MATA | Model-Averaged Tail Area (MATA) Confidence Interval and Distribution |
| matahari | Spy on Your R Session |
| matchFeat | One-to-One Feature Matching |
| MatchGATE | Estimate Group Average Treatment Effects with Matching |
| Matching | Multivariate and Propensity Score Matching with Balance Optimization |
| matchingMarkets | Analysis of Stable Matchings |
| matchingR | Matching Algorithms in R and C++ |
| MatchIt | Nonparametric Preprocessing for Parametric Causal Inference |
| MatchLinReg | Combining Matching and Linear Regression for Causal Inference |
| matchmaker | Flexible Dictionary-Based Cleaning |
| matchMulti | Optimal Multilevel Matching using a Network Algorithm |
| matchr | Pattern Matching and Enumerated Types in R |
| MatchThem | Matching and Weighting Multiply Imputed Datasets |
| matconv | A Code Converter from the Matlab/Octave Language to R |
| mateable | Assess Mating Potential in Space and Time |
| materialmodifier | Apply Photo Editing Effects |
| mathjaxr | Using 'Mathjax' in Rd Files |
| mathml | Translate R Expressions to 'MathML' and 'LaTeX'/'MathJax' |
| mathpix | Support for the 'Mathpix' API (Image to 'LaTeX') |
| matlab | 'MATLAB' Emulation Package |
| matlab2r | Translation Layer from MATLAB to R |
| matlabr | An Interface for MATLAB using System Calls |
| matlib | Matrix Functions for Teaching and Learning Linear Algebra and Multivariate Statistics |
| matman | Material Management |
| matpow | Matrix Powers |
| matrans | Model Averaging-Assisted Optimal Transfer Learning |
| matricks | Useful Tricks for Matrix Manipulation |
| matRiks | Generates Raven-Like Matrices According to Rules |
| matrisk | Macroeconomic-at-Risk |
| Matrix | Sparse and Dense Matrix Classes and Methods |
| matrixcalc | Collection of Functions for Matrix Calculations |
| MatrixCorrelation | Matrix Correlation Coefficients |
| matrixcut | Determines Clustering Threshold Based on Similarity Values |
| matrixdist | Statistics for Matrix Distributions |
| MatrixEQTL | Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations |
| MatrixExtra | Extra Methods for Sparse Matrices |
| MatrixHMM | Parsimonious Families of Hidden Markov Models for Matrix-Variate Longitudinal Data |
| matrixLaplacian | Normalized Laplacian Matrix and Laplacian Map |
| MatrixLDA | Penalized Matrix-Normal Linear Discriminant Analysis |
| MatrixMixtures | Model-Based Clustering via Matrix-Variate Mixture Models |
| MatrixModels | Modelling with Sparse and Dense Matrices |
| matrixmodp | Working with Matrices over Finite Prime Fields |
| matrixNormal | The Matrix Normal Distribution |
| matrixProfile | Matrix Profile |
| matrixprofiler | Matrix Profile for R |
| matrixsampling | Simulations of Matrix Variate Distributions |
| matrixset | Creating, Manipulating and Annotating Matrix Ensemble |
| matrixStats | Functions that Apply to Rows and Columns of Matrices (and to Vectors) |
| matrixStrucTest | Tests of Matrix Structure for Construct Validation |
| matrixTests | Fast Statistical Hypothesis Tests on Rows and Columns of Matrices |
| matsbyname | An Implementation of Matrix Mathematics that Respects Row and Column Names |
| matsindf | Matrices in Data Frames |
| MatSkew | Matrix Skew-T Parameter Estimation |
| matuR | Athlete Maturation and Biobanding |
| mau | Decision Models with Multi Attribute Utility Theory |
| mauricer | Work with 'BEAST2' Packages |
| MAVE | Methods for Dimension Reduction |
| maxaltall | 'FASTA' ML and ‘altall’ Sequences from IQ-TREE .state Files |
| maxcombo | The Group Sequential Max-Combo Test for Comparing Survival Curves |
| maxent.ot | Perform Phonological Analyses using Maximum Entropy Optimality Theory |
| MaxentVariableSelection | Selecting the Best Set of Relevant Environmental Variables along with the Optimal Regularization Multiplier for Maxent Niche Modeling |
| maximin | Space-Filling Design under Maximin Distance |
| MaximinInfer | Inference for Maximin Effects in High-Dimensional Settings |
| maxLik | Maximum Likelihood Estimation and Related Tools |
| maxlike | Model Species Distributions by Estimating the Probability of Occurrence Using Presence-Only Data |
| maxmatching | Maximum Matching for General Weighted Graph |
| MaxMC | Maximized Monte Carlo |
| maxnet | Fitting 'Maxent' Species Distribution Models with 'glmnet' |
| MaxPro | Maximum Projection Designs |
| MaxSkew | Orthogonal Data Projections with Maximal Skewness |
| maxstablePCA | Apply a PCA Like Procedure Suited for Multivariate Extreme Value Distributions |
| maxstat | Maximally Selected Rank Statistics |
| maybe | The Maybe Monad |
| MazamaCoreUtils | Utility Functions for Production R Code |
| MazamaLocationUtils | Manage Spatial Metadata for Known Locations |
| MazamaRollUtils | Efficient Rolling Functions |
| MazamaSpatialPlots | Thematic Plots for Mazama Spatial Datasets |
| MazamaSpatialUtils | Spatial Data Download and Utility Functions |
| MazamaTimeSeries | Core Functionality for Environmental Time Series |
| MAZE | Mediation Analysis for Zero-Inflated Mediators |
| mazealls | Generate Recursive Mazes |
| mazeGen | Elithorn Maze Generator |
| mazeinda | Monotonic Association on Zero-Inflated Data |
| mazing | Utilities for Making and Plotting Mazes |
| MB | The Use of Marginal Distributions in Conditional Forecasting |
| MBA | Multilevel B-Spline Approximation |
| MBAnalysis | Multiblock Exploratory and Predictive Data Analysis |
| mbbe | Model Based Bio-Equivalence |
| mbbefd | Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling |
| MBBEFDLite | Statistical Functions for the Maxwell-Boltzmann-Bose-Einstein-Fermi-Dirac (MBBEFD) Family of Distributions |
| MBC | Multivariate Bias Correction of Climate Model Outputs |
| MBCbook | Companion Package for the Book "Model-Based Clustering and Classification for Data Science" |
| mbend | Matrix Bending |
| MBESS | The MBESS R Package |
| mbest | Moment-Based Estimation for Hierarchical Models |
| MBHdesign | Spatial Designs for Ecological and Environmental Surveys |
| mbir | Magnitude-Based Inferences |
| mblm | Median-Based Linear Models |
| MBmca | Nucleic Acid Melting Curve Analysis |
| MBMethPred | Medulloblastoma Subgroups Prediction |
| mbmixture | Microbiome Mixture Analysis |
| mboost | Model-Based Boosting |
| mbr | Mass Balance Reconstruction |
| mbrdr | Model-Based Response Dimension Reduction |
| mbreaks | Estimation and Inference for Structural Breaks in Linear Regression Models |
| mbRes | Exploration of Multiple Biomarker Responses using Effect Size |
| mbrglm | Median Bias Reduction in Binomial-Response GLMs |
| MBSGS | Multivariate Bayesian Sparse Group Selection with Spike and Slab |
| MBSP | Multivariate Bayesian Model with Shrinkage Priors |
| mbsts | Multivariate Bayesian Structural Time Series |
| mBvs | Bayesian Variable Selection Methods for Multivariate Data |
| mc.heterogeneity | A Monte Carlo Based Heterogeneity Test for Meta-Analysis |
| mc2d | Tools for Two-Dimensional Monte-Carlo Simulations |
| MCARtest | Optimal Nonparametric Testing of Missing Completely at Random |
| mcauchyd | Multivariate Cauchy Distribution; Kullback-Leibler Divergence |
| MCAvariants | Multiple Correspondence Analysis Variants |
| mcb | Model Confidence Bounds |
| MCBackscattering | Monte Carlo Simulation for Surface Backscattering |
| mcbette | Model Comparison Using 'babette' |
| mcbiopi | Matrix Computation Based Identification of Prime Implicants |
| mcboost | Multi-Calibration Boosting |
| mcca | Multi-Category Classification Accuracy |
| mccca | Visualizing Class Specific Heterogeneous Tendencies in Categorical Data |
| mccf1 | Creates the MCC-F1 Curve and Calculates the MCC-F1 Metric and the Best Threshold |
| mcclust | Process an MCMC Sample of Clusterings |
| MCCM | Mixed Correlation Coefficient Matrix |
| mccmeiv | Analysis of Matched Case Control Data with a Mismeasured Exposure that is Accompanied by Instrumental Variables |
| mccr | The Matthews Correlation Coefficient |
| MCDA | Support for the Multicriteria Decision Aiding Process |
| mcemGLM | Maximum Likelihood Estimation for Generalized Linear Mixed Models |
| mcen | Multivariate Cluster Elastic Net |
| mcga | Machine Coded Genetic Algorithms for Real-Valued Optimization Problems |
| mcgf | Markov Chain Gaussian Fields Simulation and Parameter Estimation |
| mcgibbsit | Warnes and Raftery's 'MCGibbsit' MCMC Run Length and Convergence Diagnostic |
| MChtest | Monte Carlo Hypothesis Tests with Sequential Stopping |
| MCI | Multiplicative Competitive Interaction (MCI) Model |
| MCID | Estimating the Minimal Clinically Important Difference |
| MCL | Markov Cluster Algorithm |
| mclm | Mastering Corpus Linguistics Methods |
| mclogit | Multinomial Logit Models, with or without Random Effects or Overdispersion |
| mclust | Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation |
| mclustAddons | Addons for the 'mclust' Package |
| mclustcomp | Measures for Comparing Clusters |
| MCM | Estimating and Testing Intergenerational Social Mobility Effect |
| mcmapper | Mapping First Moment and C-Statistic to the Parameters of Distributions for Risk |
| mcmc | Markov Chain Monte Carlo |
| MCMC.OTU | Bayesian Analysis of Multivariate Counts Data in DNA Metabarcoding and Ecology |
| MCMC.qpcr | Bayesian Analysis of qRT-PCR Data |
| MCMC4Extremes | Posterior Distribution of Extreme Value Models in R |
| mcmcderive | Derive MCMC Parameters |
| mcmcensemble | Ensemble Sampler for Affine-Invariant MCMC |
| MCMCglmm | MCMC Generalised Linear Mixed Models |
| mcmcOutput | Functions to Store, Manipulate and Display Markov Chain Monte Carlo (MCMC) Output |
| MCMCpack | Markov Chain Monte Carlo (MCMC) Package |
| mcmcplots | Create Plots from MCMC Output |
| MCMCprecision | Precision of Discrete Parameters in Transdimensional MCMC |
| mcmcr | Manipulate MCMC Samples |
| mcmcsae | Markov Chain Monte Carlo Small Area Estimation |
| mcmcse | Monte Carlo Standard Errors for MCMC |
| MCMCtreeR | Prepare MCMCtree Analyses and Plot Bayesian Divergence Time Analyses Estimates on Trees |
| MCMCvis | Tools to Visualize, Manipulate, and Summarize MCMC Output |
| mcMST | A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem |
| mcmsupply | Estimating Public and Private Sector Contraceptive Market Supply Shares |
| mco | Multiple Criteria Optimization Algorithms and Related Functions |
| mcODE | Monte Carlo Solution of First Order Differential Equations |
| MCOE | Creates New Folders and Loads Standard Practices for Monterey County Office of Education |
| Mcomp | Data from the M-Competitions |
| mcompanion | Objects and Methods for Multi-Companion Matrices |
| mcount | Marginalized Count Regression Models |
| mcp | Regression with Multiple Change Points |
| MCPAN | Multiple Comparisons Using Normal Approximation |
| mcparallelDo | A Simplified Interface for Running Commands on Parallel Processes |
| MCPMod | Design and Analysis of Dose-Finding Studies |
| MCPModBC | Improved Inference in Multiple Comparison Procedure – Modelling |
| MCPModGeneral | A Supplement to the 'DoseFinding' Package for the General Case |
| MCPModPack | Simulation-Based Design and Analysis of Dose-Finding Trials |
| mcprofile | Testing Generalized Linear Hypotheses for Generalized Linear Model Parameters by Profile Deviance |
| mcprogress | Progress Bars and Messages for Parallel Processes |
| MCPtests | Multiples Comparisons Procedures |
| mcr | Method Comparison Regression |
| mcradds | Processing and Analyzing of Diagnostics Trials |
| mcreplicate | Multi-Core Replicate |
| mcrPioda | Method Comparison Regression - Mcr Fork for M- And MM-Deming Regression |
| MCS | Model Confidence Set Procedure |
| MCSim | Determine the Optimal Number of Clusters |
| mcStats | Visualize Results of Statistical Hypothesis Tests |
| mcstatsim | Monte Carlo Statistical Simulation Tools Using a Functional Approach |
| mctest | Multicollinearity Diagnostic Measures |
| mctq | Tools to Process the Munich ChronoType Questionnaire (MCTQ) |
| MCTrend | Monte Carlo Trend Analysis |
| mcunit | Unit Tests for MC Methods |
| mcvis | Multi-Collinearity Visualization |
| mcwr | Markov Chains with Rewards |
| md | Selecting Bandwidth for Kernel Density Estimator with Minimum Distance Method |
| md.log | Produces Markdown Log File with a Built-in Function Call |
| md4r | Markdown Parser Implemented using the 'MD4C' Library |
| mda | Mixture and Flexible Discriminant Analysis |
| mDAG | Inferring Causal Network from Mixed Observational Data Using a Directed Acyclic Graph |
| mdatools | Multivariate Data Analysis for Chemometrics |
| MDBED | Moran-Downton Bivariate Exponential Distribution |
| mdbr | Work with Microsoft Access Files |
| MDDC | Modified Detecting Deviating Cells Algorithm in Pharmacovigilance |
| mddmaps | Download World Mammal Maps |
| mde | Missing Data Explorer |
| mded | Measuring the Difference Between Two Empirical Distributions |
| MDEI | Implementing the Method of Direct Estimation and Inference |
| mdendro | Extended Agglomerative Hierarchical Clustering |
| mdftracks | Read and Write 'MTrackJ Data Files' |
| mdgc | Missing Data Imputation Using Gaussian Copulas |
| mdhglm | Multivariate Double Hierarchical Generalized Linear Models |
| MDimNormn | Multi-Dimensional MA Normalization for Plate Effect |
| mdir.logrank | Multiple-Direction Logrank Test |
| MDMA | Mathijs Deen's Miscellaneous Auxiliaries |
| MDMAPR | Molecular Detection Mapping and Analysis Platform |
| mdmb | Model Based Treatment of Missing Data |
| MDMR | Multivariate Distance Matrix Regression |
| MDOLS | Inference of Quadratic Functional for Moderate-Dimensional OLS |
| mdpeer | Graph-Constrained Regression with Enhanced Regularization Parameters Selection |
| MDPIexploreR | Web Scraping and Bibliometric Analysis of MDPI Journals |
| MDplot | Visualising Molecular Dynamics Analyses |
| MDPtoolbox | Markov Decision Processes Toolbox |
| mds | Medical Devices Surveillance |
| mdscore | Improved Score Tests for Generalized Linear Models |
| MDSGUI | A GUI for interactive MDS in R |
| MDSMap | High Density Genetic Linkage Mapping using Multidimensional Scaling |
| mdsOpt | Searching for Optimal MDS Procedure for Metric and Interval-Valued Data |
| MDSPCAShiny | Interactive Document for Working with Multidimensional Scaling and Principal Component Analysis |
| mdsr | Complement to 'Modern Data Science with R' |
| MDSS | Modeling Human Dentin Serial Sectioning |
| mdw | Maximum Diversity Weighting |
| meanr | Sentiment Analysis Scorer |
| meanShiftR | A Computationally Efficient Mean Shift Implementation |
| meantables | Make Quick Descriptive Tables for Continuous Variables |
| measr | Bayesian Psychometric Measurement Using 'Stan' |
| measurementProtocol | Send Data from R to the Measurement Protocol |
| measurements | Tools for Units of Measurement |
| measures | Performance Measures for Statistical Learning |
| measuRing | Detection and Control of Tree-Ring Widths on Scanned Image Sections |
| meboot | Maximum Entropy Bootstrap for Time Series |
| MECfda | Scalar-on-Function Regression with Measurement Error Correction |
| MEclustnet | Fit the Mixture of Experts Latent Position Cluster Model to Network Data |
| meconetcomp | Compare Microbial Networks of 'trans_network' Class of 'microeco' Package |
| mecor | Measurement Error Correction in Linear Models with a Continuous Outcome |
| mecoturn | Decipher Microbial Turnover along a Gradient |
| MED | Mediation by Tilted Balancing |
| MedDataSets | Comprehensive Medical, Disease, Treatment, and Drug Datasets |
| MedDietCalc | Multi Calculator to Compute Scores of Adherence to Mediterranean Diet |
| mederrRank | Bayesian Methods for Identifying the Most Harmful Medication Errors |
| medExtractR | Extraction of Medication Information from Clinical Text |
| medfate | Mediterranean Forest Simulation |
| medfateland | Mediterranean Landscape Simulation |
| medflex | Flexible Mediation Analysis Using Natural Effect Models |
| mediacloudr | Wrapper for the 'mediacloud.org' API |
| MediaK | Calculate MeDiA_K Distance |
| Mediana | Clinical Trial Simulations |
| MedianaDesigner | Power and Sample Size Calculations for Clinical Trials |
| MediaNews | Media News Extraction for Text Analysis |
| mediateP | Mediation Analysis Based on the Product Method |
| mediation | Causal Mediation Analysis |
| mediationsens | Simulation-Based Sensitivity Analysis for Causal Mediation Studies |
| medicaldata | Data Package for Medical Datasets |
| medicalrisk | Medical Risk and Comorbidity Tools for ICD-9-CM Data |
| medicare | Tools for Obtaining and Cleaning Medicare Public Use Files |
| meditations | Prints a Random Quote from Marcus Aurelius' Book Meditations |
| MedLEA | Morphological and Structural Features of Medicinal Leaves |
| medparser | MedPC Text Parser |
| medrxivr | Access and Search MedRxiv and BioRxiv Preprint Data |
| medScan | Large Scale Single Mediator Hypothesis Testing |
| MEDseq | Mixtures of Exponential-Distance Models with Covariates |
| meerva | Analysis of Data with Measurement Error Using a Validation Subsample |
| meetupapi | Access 'Meetup' API |
| mefa | Multivariate Data Handling in Ecology and Biogeography |
| mefa4 | Multivariate Data Handling with S4 Classes and Sparse Matrices |
| mefdind | Imports Data from MoE Spain |
| MEFM | Perform MEFM Estimation on Matrix Time Series |
| Mega2R | Accessing and Processing a 'Mega2' Genetic Database |
| MEGENA | Multiscale Clustering of Geometrical Network |
| meifly | Interactive Model Exploration using 'GGobi' |
| mekko | Variable Width Bar Charts: Bar Mekko |
| melt | Multiple Empirical Likelihood Tests |
| meltr | Read Non-Rectangular Text Data |
| meltt | Matching Event Data by Location, Time and Type |
| mem | The Moving Epidemic Method |
| memapp | The Moving Epidemic Method Web Application |
| meme | Create Meme |
| memery | Internet Memes for Data Analysts |
| memgene | Spatial Pattern Detection in Genetic Distance Data Using Moran's Eigenvector Maps |
| memify | Constructing Functions That Keep State |
| memisc | Management of Survey Data and Presentation of Analysis Results |
| memo | In-Memory Caching of Repeated Computations (Memoization) |
| memochange | Testing for Structural Breaks under Long Memory and Testing for Changes in Persistence |
| memofunc | Function Memoization |
| memoiR | R Markdown and Bookdown Templates to Publish Documents |
| memoise | 'Memoisation' of Functions |
| memor | A 'rmarkdown' Template that Can be Highly Customized |
| memoria | Quantifying Ecological Memory in Palaeoecological Datasets and Other Long Time-Series |
| MEMSS | Data Sets from Mixed-Effects Models in S |
| memuse | Memory Estimation Utilities |
| MendelianRandomization | Mendelian Randomization Package |
| MEPDF | Creation of Empirical Density Functions Based on Multivariate Data |
| Mercator | Clustering and Visualizing Distance Matrices |
| merDeriv | Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models |
| mergedblocks | Merged Block Randomization |
| mergen | AI-Driven Code Generation, Explanation and Execution for Data Analysis |
| mergenstudio | 'Mergen' Studio: An 'RStudio' Addin Wrapper for the 'Mergen' Package |
| mergeTrees | Aggregating Trees |
| mergingTools | Tools to Merge Hardware Event Monitors (HEMs) Coming from Separate Subexperiments into One Single Dataframe |
| merlin | Mixed Effects Regression for Linear, Non-Linear and User-Defined Models |
| MERO | Performing Monte Carlo Expectation Maximization Random Forest Imputation for Biological Data |
| merror | Accuracy and Precision of Measurements |
| merTools | Tools for Analyzing Mixed Effect Regression Models |
| meshed | Bayesian Regression with Meshed Gaussian Processes |
| MESS | Miscellaneous Esoteric Statistical Scripts |
| messaging | Conveniently Issue Messages, Warnings, and Errors |
| messi | Mediation Analysis with External Summary-Level Information on Total Effect |
| messy.cats | Employs String Distance Tools to Help Clean Categorical Data |
| messydates | A Flexible Class for Messy Dates |
| Mestim | Computes the Variance-Covariance Matrix of Multidimensional Parameters Using M-Estimation |
| meta | General Package for Meta-Analysis |
| meta.shrinkage | Meta-Analyses for Simultaneously Estimating Individual Means |
| meta4diag | Meta-Analysis for Diagnostic Test Studies |
| MetaAnalyser | An Interactive Visualisation of Meta-Analysis as a Physical Weighing Machine |
| metabias | Meta-Analysis for Within-Study and/or Across-Study Biases |
| metaBLUE | BLUE for Combining Location and Scale Information in a Meta-Analysis |
| metaBMA | Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis |
| metaboData | Example Metabolomics Data Sets |
| MetabolAnalyze | Probabilistic Latent Variable Models for Metabolomic Data |
| metabolic | Datasets and Functions for Reproducing Meta-Analyses |
| MetabolicSurv | A Biomarker Validation Approach for Classification and Predicting Survival Using Metabolomics Signature |
| MetabolicSyndrome | Diagnosis of Metabolic Syndrome |
| MetabolomicsBasics | Basic Functions to Investigate Metabolomics Data Matrices |
| MetaboQC | Normalize Metabolomic Data using QC Signal |
| metabup | Bayesian Meta-Analysis Using Basic Uncertain Pooling |
| metacart | Meta-CART: A Flexible Approach to Identify Moderators in Meta-Analysis |
| metaCluster | Metagenomic Clustering |
| metacom | Analysis of the 'Elements of Metacommunity Structure' |
| MetaComp | EDGE Taxonomy Assignments Visualization |
| metaconfoundr | Visualize 'Confounder' Control in Meta-Analyses |
| metaConvert | An Automatic Suite for Estimation of Various Effect Size Measures |
| metacore | A Centralized Metadata Object Focus on Clinical Trial Data Programming Workflows |
| MetaCycle | Evaluate Periodicity in Large Scale Data |
| metadat | Meta-Analysis Datasets |
| metadeconfoundR | Covariate-Sensitive Analysis of Cross-Sectional High-Dimensional Data |
| metaDigitise | Extract and Summarise Data from Published Figures |
| metadynminer | Tools to Read, Analyze and Visualize Metadynamics HILLS Files from 'Plumed' |
| metadynminer3d | Tools to Read, Analyze and Visualize Metadynamics 3D HILLS Files from 'Plumed' |
| metaEnsembleR | Automated Intuitive Package for Meta-Ensemble Learning |
| metafolio | Metapopulation Simulations for Conserving Salmon Through Portfolio Optimization |
| metafor | Meta-Analysis Package for R |
| metaforest | Exploring Heterogeneity in Meta-Analysis using Random Forests |
| metafuse | Fused Lasso Approach in Regression Coefficient Clustering |
| metagam | Meta-Analysis of Generalized Additive Models |
| metaGE | Meta-Analysis for Detecting Genotype x Environment Associations |
| metagear | Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis |
| metaggR | Calculate the Knowledge-Weighted Estimate |
| MetaHD | A Multivariate Meta-Analysis Model for High-Dimensional Metabolomics Data |
| metaHelper | Transforms Statistical Measures Commonly Used for Meta-Analysis |
| metaheuristicOpt | Metaheuristic for Optimization |
| metainc | Assessment of Inconsistency in Meta-Analysis using Decision Thresholds |
| MetaIntegration | Ensemble Meta-Prediction Framework |
| metajam | Easily Download Data and Metadata from 'DataONE' |
| MetaLandSim | Landscape and Range Expansion Simulation |
| metaLik | Likelihood Inference in Meta-Analysis and Meta-Regression Models |
| metalite | ADaM Metadata Structure |
| metalite.ae | Adverse Events Analysis Using 'metalite' |
| metalite.table1 | Interactive Table of Descriptive Statistics in HTML |
| MetaLonDA | Metagenomics Longitudinal Differential Abundance Method |
| MetAlyzer | Read and Analyze 'MetIDQ™' Software Output Files |
| metaMA | Meta-Analysis for MicroArrays |
| metamedian | Meta-Analysis of Medians |
| metamer | Create Data with Identical Statistics |
| metamicrobiomeR | Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects |
| metamisc | Meta-Analysis of Diagnosis and Prognosis Research Studies |
| metan | Multi Environment Trials Analysis |
| MetaNet | Network Analysis for Omics Data |
| metanetwork | Handling and Representing Trophic Networks in Space and Time |
| MetaNLP | Natural Language Processing for Meta Analysis |
| metansue | Meta-Analysis of Studies with Non-Statistically Significant Unreported Effects |
| metap | Meta-Analysis of Significance Values |
| metapack | Bayesian Meta-Analysis and Network Meta-Analysis |
| metaplot | Data-Driven Plot Design |
| metaplus | Robust Meta-Analysis and Meta-Regression |
| metapost | Interface to 'MetaPost' |
| metapower | Power Analysis for Meta-Analysis |
| metapro | Robust P-Value Combination Methods |
| metaprotr | Metaproteomics Post-Processing Analysis |
| metaRange | Framework to Build Mechanistic and Metabolic Constrained Species Distribution Models |
| metarep | Replicability-Analysis Tools for Meta-Analysis |
| metaRNASeq | Meta-Analysis of RNA-Seq Data |
| metaSDTreg | Regression Models for Meta Signal Detection Theory |
| metaSEM | Meta-Analysis using Structural Equation Modeling |
| metasens | Statistical Methods for Sensitivity Analysis in Meta-Analysis |
| MetaSKAT | Meta Analysis for SNP-Set (Sequence) Kernel Association Test |
| metasnf | Meta Clustering with Similarity Network Fusion |
| MetaStan | Bayesian Meta-Analysis via 'Stan' |
| MetaSubtract | Subtracting Summary Statistics of One or more Cohorts from Meta-GWAS Results |
| metaSurvival | Meta-Analysis of a Single Survival Curve |
| metatest | Fit and Test Metaregression Models |
| metathis | HTML Metadata Tags for 'R Markdown' and 'Shiny' |
| metatools | Enable the Use of 'metacore' to Help Create and Check Dataset |
| MetaUtility | Utility Functions for Conducting and Interpreting Meta-Analyses |
| metavcov | Computing Variances and Covariances, Visualization and Missing Data Solution for Multivariate Meta-Analysis |
| metaviz | Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for Meta-Analysis |
| metawho | Meta-Analytical Implementation to Identify Who Benefits Most from Treatments |
| MetBrewer | Color Palettes Inspired by Works at the Metropolitan Museum of Art |
| MetChem | Chemical Structural Similarity Analysis |
| meteo | RFSI & STRK Interpolation for Meteo and Environmental Variables |
| meteoEVT | Computation and Visualization of Energetic and Vortical Atmospheric Quantities |
| meteoForecast | Numerical Weather Predictions |
| meteoland | Landscape Meteorology Tools |
| meteor | Meteorological Data Manipulation |
| meteorits | Mixture-of-Experts Modeling for Complex Non-Normal Distributions |
| meteospain | Access to Spanish Meteorological Stations Services |
| meteR | Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE) |
| metevalue | E-Value in the Omics Data Association Studies |
| MetGen | Stochastic Weather Generator |
| MethComp | Analysis of Agreement in Method Comparison Studies |
| methcon5 | Identify and Rank CpG DNA Methylation Conservation Along the Human Genome |
| MethEvolSIM | Simulate DNA Methylation Dynamics on Different Genomic Structures along Genealogies |
| MethodCompare | Evaluating Bias and Precision in Method Comparison Studies |
| MethodOpt | Advanced Method Optimization for Spectra-Generating Sampling and Analysis Instrumentation |
| MeTo | Meteorological Tools |
| metools | Macroeconomics Tools |
| MetProc | Separate Metabolites into Likely Measurement Artifacts and True Metabolites |
| metR | Tools for Easier Analysis of Meteorological Fields |
| metrica | Prediction Performance Metrics |
| MetricGraph | Random Fields on Metric Graphs |
| metricminer | Mine Metrics from Common Places on the Web |
| Metrics | Evaluation Metrics for Machine Learning |
| MetricsWeighted | Weighted Metrics and Performance Measures for Machine Learning |
| metrix | Water Quality Metrics Calculator |
| metro | Washington Metropolitan Area Transit Authority API |
| metRology | Support for Metrological Applications |
| metropolis | The Metropolis Algorithm |
| mets | Analysis of Multivariate Event Times |
| MetSizeR | A Shiny App for Sample Size Estimation in Metabolomic Experiments |
| metsyn | Interface with the Meteo France Synop Data API |
| mev | Modelling of Extreme Values |
| mevr | Fitting the Metastatistical Extreme Value Distribution MEVD |
| mewAvg | A Fixed Memeory Moving Expanding Window Average |
| MexBrewer | Color Palettes Inspired by Works of Mexican Painters and Muralists |
| mexhaz | Mixed Effect Excess Hazard Models |
| mexicolors | Mexican Politics-Inspired Color Palette Generator |
| mExplorer | Identifying Master Gene Regulators from Gene Expression and DNA-Binding Data |
| MF.beta4 | Measuring Ecosystem Multi-Functionality and Its Decomposition |
| mfaces | Fast Covariance Estimation for Multivariate Sparse Functional Data |
| MFAg | Multiple Factor Analysis (MFA) |
| mFD | Compute and Illustrate the Multiple Facets of Functional Diversity |
| mfdb | MareFrame DB Querying Library |
| MFDFA | MultiFractal Detrended Fluctuation Analysis |
| mFDP | Flexible Control of the mFDP |
| mfGARCH | Mixed-Frequency GARCH Models |
| mFilter | Miscellaneous Time Series Filters |
| mFLICA | Leadership-Inference Framework for Multivariate Time Series |
| MFO | Maximal Fat Oxidation and Kinetics Calculation |
| mfp | Multivariable Fractional Polynomials |
| mfp2 | Multivariable Fractional Polynomial Models with Extensions |
| MFPCA | Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains |
| mfpp | 'Matrix-Based Flexible Project Planning' |
| MFSIS | Model-Free Sure Independent Screening Procedures |
| MFT | The Multiple Filter Test for Change Point Detection |
| MfUSampler | Multivariate-from-Univariate (MfU) MCMC Sampler |
| mfx | Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs |
| MG1StationaryProbability | Computes Stationary Distribution for M/G/1 Queuing System |
| mgarchBEKK | Simulating, Estimating and Diagnosing MGARCH (BEKK and mGJR) Processes |
| MGBT | Multiple Grubbs-Beck Low-Outlier Test |
| mgc | Multiscale Graph Correlation |
| mgcv | Mixed GAM Computation Vehicle with Automatic Smoothness Estimation |
| mgcViz | Visualisations for Generalized Additive Models |
| MGDrivE | Mosquito Gene Drive Explorer |
| MGDrivE2 | Mosquito Gene Drive Explorer 2 |
| mgee2 | Marginal Analysis of Misclassified Longitudinal Ordinal Data |
| mggd | Multivariate Generalised Gaussian Distribution; Kullback-Leibler Divergence |
| mgi.report.reader | Read Mouse Genome Informatics Reports |
| MGL | Module Graphical Lasso |
| mglasso | Multiscale Graphical Lasso |
| MGLM | Multivariate Response Generalized Linear Models |
| mglmn | Model Averaging for Multivariate GLM with Null Models |
| mgm | Estimating Time-Varying k-Order Mixed Graphical Models |
| MGMM | Missingness Aware Gaussian Mixture Models |
| MGMS2 | 'MGMS2' for Polymicrobial Samples |
| MGPSDK | Interact with the Maxar 'MGP' Application Programming Interfaces |
| mgpStreamingSDK | Interact with the Maxar MGP Streaming API |
| MGSDA | Multi-Group Sparse Discriminant Analysis |
| mgss | A Matrix-Free Multigrid Preconditioner for Spline Smoothing |
| mgsub | Safe, Multiple, Simultaneous String Substitution |
| mgwnbr | Multiscale Geographically Weighted Negative Binomial Regression |
| mgwrhw | Displays GWR (Geographically Weighted Regression) and Mixed GWR Output and Map |
| mgwrsar | GWR and MGWR with Spatial Autocorrelation |
| mhazard | Nonparametric and Semiparametric Methods for Multivariate Failure Time Data |
| mhcnuggetsr | Call MHCnuggets |
| MHCtools | Analysis of MHC Data in Non-Model Species |
| MHD | Metric Halfspace Depth |
| MHDA | Massive Hierarchically Data Analysis |
| mHG | Minimum-Hypergeometric Test |
| mHMMbayes | Multilevel Hidden Markov Models Using Bayesian Estimation |
| Mhorseshoe | Approximate Algorithm for Horseshoe Prior |
| mhsmm | Inference for Hidden Markov and Semi-Markov Models |
| mhtboot | Multiple Hypothesis Test Based on Distribution of p Values |
| MHTdiscrete | Multiple Hypotheses Testing for Discrete Data |
| MHTmult | Multiple Hypotheses Testing for Multiple Families/Groups Structure |
| MHTrajectoryR | Bayesian Model Selection in Logistic Regression for the Detection of Adverse Drug Reactions |
| mhurdle | Multiple Hurdle Tobit Models |
| mi | Missing Data Imputation and Model Checking |
| mi4p | Multiple Imputation for Proteomics |
| MIAmaxent | A Modular, Integrated Approach to Maximum Entropy Distribution Modeling |
| micar | 'Mica' Data Web Portal Client |
| micd | Multiple Imputation in Causal Graph Discovery |
| mice | Multivariate Imputation by Chained Equations |
| miceadds | Some Additional Multiple Imputation Functions, Especially for 'mice' |
| miceafter | Data and Statistical Analyses after Multiple Imputation |
| micEcon | Microeconomic Analysis and Modelling |
| micEconAids | Demand Analysis with the Almost Ideal Demand System (AIDS) |
| micEconCES | Analysis with the Constant Elasticity of Substitution (CES) Function |
| micEconDistRay | Econometric Production Analysis with Ray-Based Distance Functions |
| micEconIndex | Price and Quantity Indices |
| micEconSNQP | Symmetric Normalized Quadratic Profit Function |
| miceFast | Fast Imputations Using 'Rcpp' and 'Armadillo' |
| micemd | Multiple Imputation by Chained Equations with Multilevel Data |
| miceRanger | Multiple Imputation by Chained Equations with Random Forests |
| michelRodange | The Works (in Luxembourguish) of Michel Rodange |
| miclust | Multiple Imputation in Cluster Analysis |
| micompr | Multivariate Independent Comparison of Observations |
| miCoPTCM | Promotion Time Cure Model with Mis-Measured Covariates |
| microbats | An Implementation of Bat Algorithm in R |
| microbenchmark | Accurate Timing Functions |
| microbial | Do 16s Data Analysis and Generate Figures |
| microbiomeMQC | Calculate 4 Key Reporting Measures |
| MicrobiomeStat | Statistical Methods for Microbiome Compositional Data |
| MicrobiomeSurv | Biomarker Validation for Microbiome-Based Survival Classification and Prediction |
| microclass | Methods for Taxonomic Classification of Prokaryotes |
| microcontax | The ConTax Data Package |
| microCRAN | Hosting an Independent CRAN Repository |
| MicroDatosEs | Utilities for Official Spanish Microdata |
| microdiluteR | Analysis of Broth Microdilution Assays |
| microeco | Microbial Community Ecology Data Analysis |
| microhaplot | Microhaplotype Constructor and Visualizer |
| microinverterdata | Collect your Microinverter Data |
| MicroMacroMultilevel | Micro-Macro Multilevel Modeling |
| micromap | Linked Micromap Plots |
| micromapST | Linked Micromap Plots for U. S. and Other Geographic Areas |
| MicroMoB | Discrete Time Simulation of Mosquito-Borne Pathogen Transmission |
| micromodal | Create Simple and Elegant Modal Dialogs in 'shiny' |
| MicroNiche | Microbial Niche Measurements |
| micronutr | Determining Vitamin and Mineral Status of Populations |
| micropan | Microbial Pan-Genome Analysis |
| microplot | Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel' |
| microPop | Process-Based Modelling of Microbial Populations |
| MicroSEC | Sequence Error Filter for Formalin-Fixed and Paraffin-Embedded Samples |
| microseq | Basic Biological Sequence Handling |
| microsimulation | Discrete Event Simulation in R and C++, with Tools for Cost-Effectiveness Analysis |
| Microsoft365R | Interface to the 'Microsoft 365' Suite of Cloud Services |
| microsynth | Synthetic Control Methods with Micro- And Meso-Level Data |
| MicSim | Performing Continuous-Time Microsimulation |
| MICsplines | The Computing of Monotonic Spline Bases and Constrained Least-Squares Estimates |
| micsr | Microeconometrics with R |
| micss | Modified Iterative Cumulative Sum of Squares Algorithm |
| MiDA | Microarray Data Analysis |
| midas | Turn HTML 'Shiny' |
| midas2 | Bayesian Platform Design with Subgroup Efficacy Exploration(MIDAS-2) |
| midasml | Estimation and Prediction Methods for High-Dimensional Mixed Frequency Time Series Data |
| midasr | Mixed Data Sampling Regression |
| midastouch | Multiple Imputation by Distance Aided Donor Selection |
| midfieldr | Tools and Methods for Working with MIDFIELD Data in 'R' |
| midi | Microstructure Information from Diffusion Imaging |
| MIDN | Nearly Exact Sample Size Calculation for Exact Powerful Nonrandomized Tests for Differences Between Binomial Proportions |
| midoc | A Decision-Making System for Multiple Imputation |
| midrangeMCP | Multiples Comparisons Procedures Based on Studentized Midrange and Range Distributions |
| miesmuschel | Mixed Integer Evolution Strategies |
| mifa | Multiple Imputation for Exploratory Factor Analysis |
| mig | Multivariate Inverse Gaussian Distribution |
| MigConnectivity | Estimate Migratory Connectivity for Migratory Animals |
| migest | Methods for the Indirect Estimation of Bilateral Migration |
| migraph | Univariate and Multivariate Tests for Multimodal and Other Networks |
| migrate | Create Credit State Migration (Transition) Matrices |
| migration.indices | Migration Indices |
| MigrationDetectR | Segment-Based Migration Detection Algorithm |
| migui | Graphical User Interface to the 'mi' Package |
| miic | Learning Causal or Non-Causal Graphical Models Using Information Theory |
| MIIPW | IPW and Mean Score Methods for Time-Course Missing Data |
| MIIVefa | Exploratory Factor Analysis Using Model Implied Instrumental Variables |
| MIIVsem | Model Implied Instrumental Variable (MIIV) Estimation of Structural Equation Models |
| mikropml | User-Friendly R Package for Supervised Machine Learning Pipelines |
| miLAG | Calculates Microbial Lag Duration (on the Population Level) from Provided Growth Curve Data |
| mildsvm | Multiple-Instance Learning with Support Vector Machines |
| miLineage | Association Tests for Microbial Lineages on a Taxonomic Tree |
| milorGWAS | Mixed Logistic Regression for Genome-Wide Analysis Studies (GWAS) |
| milr | Multiple-Instance Logistic Regression with LASSO Penalty |
| mimdo | Multivariate Imputation by Mahalanobis Distance Optimization |
| mime | Map Filenames to MIME Types |
| MIMER | Data Wrangling for Antimicrobial Resistance Studies |
| mimi | Main Effects and Interactions in Mixed and Incomplete Data |
| MiMIR | Metabolomics-Based Models for Imputing Risk |
| mimiSBM | Mixture of Multilayer Integrator Stochastic Block Models |
| MIMSunit | Algorithm to Compute Monitor Independent Movement Summary Unit (MIMS-Unit) |
| mimsy | Calculate MIMS Dissolved Gas Concentrations Without Getting a Headache |
| minb | Multiple-Inflated Negative Binomial Model |
| mind | Multivariate Model Based Inference for Domains |
| MindOnStats | Data sets included in Utts and Heckard's Mind on Statistics |
| mineCitrus | Extract and Analyze Median Molecule Intensity from 'citrus' Output |
| mined | Minimum Energy Designs |
| MinEDfind | A Bayesian Design for Minimum Effective Dosing-Finding Trial |
| minerva | Maximal Information-Based Nonparametric Exploration for Variable Analysis |
| minesweeper | Play Minesweeper |
| mineSweepR | Mine Sweeper Game |
| minFactorial | All Possible Minimally Changed Factorial Run Orders |
| minic | Minimization Methods for Ill-Conditioned Problems |
| miniCRAN | Create a Mini Version of CRAN Containing Only Selected Packages |
| minidown | Create Simple Yet Powerful HTML Documents with Light Weight CSS Frameworks |
| miniGUI | Tcl/Tk Quick and Simple Function GUI |
| miniLNM | Miniature Logistic-Normal Multinomial Models |
| minimalRSD | Minimally Changed CCD and BBD |
| minimap | Create Tile Grid Maps |
| minimapR | Wrapper for 'minimap2' |
| minimax | The Minimax Distribution Family |
| minimaxApprox | Implementation of Remez Algorithm for Polynomial and Rational Function Approximation |
| miniMeta | Web Application to Run Meta-Analyses |
| minioclient | Interface to the 'MinIO' Client |
| miniPCH | Survival Distributions with Piece-Wise Constant Hazards |
| Minirand | Minimization Randomization |
| minired | R Interface to 'Redatam' Library |
| miniUI | Shiny UI Widgets for Small Screens |
| minMSE | Implementation of the minMSE Treatment Assignment Method for One or Multiple Treatment Groups |
| minpack.lm | R Interface to the Levenberg-Marquardt Nonlinear Least-Squares Algorithm Found in MINPACK, Plus Support for Bounds |
| minqa | Derivative-Free Optimization Algorithms by Quadratic Approximation |
| minque | Various Linear Mixed Model Analyses |
| minsample1 | The Minimum Sample Size |
| minsample2 | The Minimum Sample Size |
| minSNPs | Resolution-Optimised SNPs Searcher |
| MINTplates | Encode "License-Plates" from Sequences and Decode Them Back |
| minty | Minimal Type Guesser |
| mipfp | Multidimensional Iterative Proportional Fitting and Alternative Models |
| mipplot | An Open-Source Tool for Visualization of Climate Mitigation Scenarios |
| mirai | Minimalist Async Evaluation Framework for R |
| miRecSurv | Left-Censored Recurrent Events Survival Models |
| MIRES | Measurement Invariance Assessment Using Random Effects Models and Shrinkage |
| miRetrieve | miRNA Text Mining in Abstracts |
| MiRKAT | Microbiome Regression-Based Kernel Association Tests |
| MiRNAQCD | Micro-RNA Quality Control and Diagnosis |
| miRNAss | Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples |
| mirrorselect | Test CRAN/Bioconductor Mirror Speed |
| MiRSEA | 'MicroRNA' Set Enrichment Analysis |
| mirt | Multidimensional Item Response Theory |
| mirtCAT | Computerized Adaptive Testing with Multidimensional Item Response Theory |
| miRtest | Combined miRNA- And mRNA-Testing |
| mirtjml | Joint Maximum Likelihood Estimation for High-Dimensional Item Factor Analysis |
| mirtsvd | SVD-Based Estimation for Exploratory Item Factor Analysis |
| misaem | Linear Regression and Logistic Regression with Missing Covariates |
| misc3d | Miscellaneous 3D Plots |
| miscF | Miscellaneous Functions |
| miscFuncs | Miscellaneous Useful Functions Including LaTeX Tables, Kalman Filtering, QQplots with Simulation-Based Confidence Intervals, Linear Regression Diagnostics and Development Tools |
| miscIC | Misclassified Interval Censored Time-to-Event Data |
| misclassGLM | Computation of Generalized Linear Models with Misclassified Covariates Using Side Information |
| MiscMetabar | Miscellaneous Functions for Metabarcoding Analysis |
| miscset | Miscellaneous Tools Set |
| miscTools | Miscellaneous Tools and Utilities |
| miselect | Variable Selection for Multiply Imputed Data |
| mispitools | Missing Person Identification Tools |
| mispr | Multiple Imputation with Sequential Penalized Regression |
| misPRIME | Partial Replacement Imputation Estimation for Missing Covariates |
| MiSPU | Microbiome Based Sum of Powered Score (MiSPU) Tests |
| MisRepARMA | Misreported Time Series Analysis |
| missCforest | Ensemble Conditional Trees for Missing Data Imputation |
| missCompare | Intuitive Missing Data Imputation Framework |
| MissCP | Change Point Detection with Missing Values |
| missDeaths | Simulating and Analyzing Time to Event Data in the Presence of Population Mortality |
| missDiag | Comparing Observed and Imputed Values under MAR and MCAR |
| missForest | Nonparametric Missing Value Imputation using Random Forest |
| missForestPredict | Missing Value Imputation using Random Forest for Prediction Settings |
| MissingHandle | Handles Missing Dates and Data and Converts into Weekly and Monthly from Daily |
| missingHE | Missing Outcome Data in Health Economic Evaluation |
| MissingPlotLSD | Missing Plot in LSD |
| MissingPlotRBD | Missing Plot in RBD |
| missMDA | Handling Missing Values with Multivariate Data Analysis |
| MissMech | Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random |
| missMethods | Methods for Missing Data |
| missoNet | Missingness in Multi-Task Regression with Network Estimation |
| misspi | Missing Value Imputation in Parallel |
| Missplot | Missing Plot Technique in Design of Experiment |
| missRanger | Fast Imputation of Missing Values |
| missSBM | Handling Missing Data in Stochastic Block Models |
| missSOM | Self-Organizing Maps with Built-in Missing Data Imputation |
| mistr | Mixture and Composite Distributions |
| mistral | Methods in Structural Reliability |
| misty | Miscellaneous Functions 'T. Yanagida' |
| misuvi | Access the Michigan Substance Use Vulnerability Index (MI-SUVI) |
| mitml | Tools for Multiple Imputation in Multilevel Modeling |
| MitoHEAR | Quantification of Mitochondrial DNA Heteroplasmy |
| mitools | Tools for Multiple Imputation of Missing Data |
| mitre | Cybersecurity MITRE Standards Data and Digraphs |
| MittagLeffleR | Mittag-Leffler Family of Distributions |
| miWQS | Multiple Imputation Using Weighted Quantile Sum Regression |
| mix | Estimation/Multiple Imputation for Mixed Categorical and Continuous Data |
| mixAK | Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering |
| MixAll | Clustering and Classification using Model-Based Mixture Models |
| mixAR | Mixture Autoregressive Models |
| mixbox | Observed Fisher Information Matrix for Finite Mixture Model |
| mixcat | Mixed Effects Cumulative Link and Logistic Regression Models |
| mixchar | Mixture Model for the Deconvolution of Thermal Decay Curves |
| mixcure | Mixture Cure Models |
| mixdir | Cluster High Dimensional Categorical Datasets |
| mixdist | Finite Mixture Distribution Models |
| mixedBayes | Bayesian Longitudinal Regularized Quantile Mixed Model |
| mixedCCA | Sparse Canonical Correlation Analysis for High-Dimensional Mixed Data |
| MixedIndTests | Tests of Randomness and Tests of Independence |
| MixedLevelRSDs | Mixed Level Response Surface Designs |
| mixedLSR | Mixed, Low-Rank, and Sparse Multivariate Regression on High-Dimensional Data |
| mixedMem | Tools for Discrete Multivariate Mixed Membership Models |
| MixedPoisson | Mixed Poisson Models |
| MixedPsy | Statistical Tools for the Analysis of Psychophysical Data |
| mixedsde | Estimation Methods for Stochastic Differential Mixed Effects Models |
| MixedTS | Mixed Tempered Stable Distribution |
| mixexp | Design and Analysis of Mixture Experiments |
| MIXFIM | Evaluation of the FIM in NLMEMs using MCMC |
| MixfMRI | Mixture fMRI Clustering Analysis |
| mixgb | Multiple Imputation Through 'XGBoost' |
| MixGHD | Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions |
| mixhvg | Mixture of Multiple Highly Variable Feature Selection Methods |
| mixIndependR | Genetics and Independence Testing of Mixed Genetic Panels |
| mixKernel | Omics Data Integration Using Kernel Methods |
| mixl | Simulated Maximum Likelihood Estimation of Mixed Logit Models for Large Datasets |
| MixLFA | Mixture of Longitudinal Factor Analysis Methods |
| mixlm | Mixed Model ANOVA and Statistics for Education |
| MixMatrix | Classification with Matrix Variate Normal and t Distributions |
| mixmeta | An Extended Mixed-Effects Framework for Meta-Analysis |
| mixOofA | Design and Analysis of Order-of-Addition Mixture Experiments |
| mixopt | Mixed Variable Optimization |
| MixOptim | Mixture Optimization Algorithm |
| mixPHM | Mixtures of Proportional Hazard Models |
| mixpoissonreg | Mixed Poisson Regression for Overdispersed Count Data |
| mixR | Finite Mixture Modeling for Raw and Binned Data |
| mixRaschTools | Plotting and Average Theta Functions for Multiple Class Mixed Rasch Models |
| MixRF | A Random-Forest-Based Approach for Imputing Clustered Incomplete Data |
| MixSAL | Mixtures of Multivariate Shifted Asymmetric Laplace (SAL) Distributions |
| MixSemiRob | Mixture Models: Parametric, Semiparametric, and Robust |
| MixSIAR | Bayesian Mixing Models in R |
| MixSim | Simulating Data to Study Performance of Clustering Algorithms |
| mixsmsn | Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions |
| mixSPE | Mixtures of Power Exponential and Skew Power Exponential Distributions for Use in Model-Based Clustering and Classification |
| mixsqp | Sequential Quadratic Programming for Fast Maximum-Likelihood Estimation of Mixture Proportions |
| mixSSG | Clustering Using Mixtures of Sub Gaussian Stable Distributions |
| mixtools | Tools for Analyzing Finite Mixture Models |
| mixtox | Dose Response Curve Fitting and Mixture Toxicity Assessment |
| mixtur | Modelling Continuous Report Visual Short-Term Memory Studies |
| mixture | Mixture Models for Clustering and Classification |
| MixtureMissing | Robust and Flexible Model-Based Clustering for Data Sets with Missing Values at Random |
| MixTwice | Large-Scale Hypothesis Testing by Variance Mixing |
| MixviR | Analysis and Exploration of Mixed Microbial Genomic Samples |
| mixvlmc | Variable Length Markov Chains with Covariates |
| mize | Unconstrained Numerical Optimization Algorithms |
| mizer | Dynamic Multi-Species Size Spectrum Modelling |
| MJMbamlss | Multivariate Joint Models with 'bamlss' |
| MKclass | Statistical Classification |
| mkde | 2D and 3D Movement-Based Kernel Density Estimates (MKDEs) |
| MKdescr | Descriptive Statistics |
| MKendall | Matrix Kendall's Tau and Matrix Elliptical Factor Model |
| mkin | Kinetic Evaluation of Chemical Degradation Data |
| MKinfer | Inferential Statistics |
| MKLE | Maximum Kernel Likelihood Estimation |
| MKMeans | A Modern K-Means (MKMeans) Clustering Algorithm |
| MKmisc | Miscellaneous Functions from M. Kohl |
| mknapsack | Multiple Knapsack Problem Solver |
| MKomics | Omics Data Analysis |
| MKpower | Power Analysis and Sample Size Calculation |
| mkssd | Efficient Multi-Level k-Circulant Supersaturated Designs |
| ML.MSBD | Maximum Likelihood Inference on Multi-State Trees |
| ML2Pvae | Variational Autoencoder Models for IRT Parameter Estimation |
| mlapi | Abstract Classes for Building 'scikit-learn' Like API |
| mlbench | Machine Learning Benchmark Problems |
| mlbplotR | Create 'ggplot2' and 'gt' Visuals with Major League Baseball Logos |
| mlbstats | Major League Baseball Player Statistics Calculator |
| MLCIRTwithin | Latent Class Item Response Theory (LC-IRT) Models under Within-Item Multidimensionality |
| MLCM | Maximum Likelihood Conjoint Measurement |
| MLCOPULA | Classification Models with Copula Functions |
| MLDataR | Collection of Machine Learning Datasets for Supervised Machine Learning |
| mldr | Exploratory Data Analysis and Manipulation of Multi-Label Data Sets |
| mldr.datasets | R Ultimate Multilabel Dataset Repository |
| mldr.resampling | Resampling Algorithms for Multi-Label Datasets |
| MLDS | Maximum Likelihood Difference Scaling |
| MLE | Maximum Likelihood Estimation of Various Univariate and Multivariate Distributions |
| mle.tools | Expected/Observed Fisher Information and Bias-Corrected Maximum Likelihood Estimate(s) |
| mlearning | Machine Learning Algorithms with Unified Interface and Confusion Matrices |
| MLEce | Asymptotic Efficient Closed-Form Estimators for Multivariate Distributions |
| MLEcens | Computation of the MLE for Bivariate Interval Censored Data |
| mlegp | Maximum Likelihood Estimates of Gaussian Processes |
| mlelod | MLE for Normally Distributed Data Censored by Limit of Detection |
| mlergm | Multilevel Exponential-Family Random Graph Models |
| MLeval | Machine Learning Model Evaluation |
| mlexperiments | Machine Learning Experiments |
| mlf | Machine Learning Foundations |
| mlfit | Iterative Proportional Fitting Algorithms for Nested Structures |
| mlflow | Interface to 'MLflow' |
| MLFS | Machine Learning Forest Simulator |
| MLGdata | Datasets for Use with Salvan, Sartori and Pace (2020) |
| MLGL | Multi-Layer Group-Lasso |
| MLID | Multilevel Index of Dissimilarity |
| mlim | Single and Multiple Imputation with Automated Machine Learning |
| mllrnrs | R6-Based ML Learners for 'mlexperiments' |
| mlma | Multilevel Mediation Analysis |
| mlmc | Multi-Level Monte Carlo |
| MLmetrics | Machine Learning Evaluation Metrics |
| mlmhelpr | Multilevel/Mixed Model Helper Functions |
| mlmi | Maximum Likelihood Multiple Imputation |
| MLML2R | Maximum Likelihood Estimation of DNA Methylation and Hydroxymethylation Proportions |
| mlmm.gwas | Pipeline for GWAS Using MLMM |
| MLModelSelection | Model Selection in Multivariate Longitudinal Data Analysis |
| MLMOI | Estimating Frequencies, Prevalence and Multiplicity of Infection |
| mlmpower | Power Analysis and Data Simulation for Multilevel Models |
| mlmRev | Examples from Multilevel Modelling Software Review |
| mlmtools | Multi-Level Model Assessment Kit |
| mlmts | Machine Learning Algorithms for Multivariate Time Series |
| MLMusingR | Practical Multilevel Modeling |
| mlogit | Multinomial Logit Models |
| mlogitBMA | Bayesian Model Averaging for Multinomial Logit Models |
| mlpack | 'Rcpp' Integration for the 'mlpack' Library |
| MLpreemption | Maximum Likelihood Estimation of the Niche Preemption Model |
| MLPUGS | Multi-Label Prediction Using Gibbs Sampling (and Classifier Chains) |
| mlpwr | A Power Analysis Toolbox to Find Cost-Efficient Study Designs |
| mlquantify | Algorithms for Class Distribution Estimation |
| mlr | Machine Learning in R |
| mlr3 | Machine Learning in R - Next Generation |
| mlr3batchmark | Batch Experiments for 'mlr3' |
| mlr3benchmark | Analysis and Visualisation of Benchmark Experiments |
| mlr3cluster | Cluster Extension for 'mlr3' |
| mlr3data | Collection of Machine Learning Data Sets for 'mlr3' |
| mlr3db | Data Base Backend for 'mlr3' |
| mlr3fairness | Fairness Auditing and Debiasing for 'mlr3' |
| mlr3fda | Extending 'mlr3' to Functional Data Analysis |
| mlr3filters | Filter Based Feature Selection for 'mlr3' |
| mlr3fselect | Feature Selection for 'mlr3' |
| mlr3hyperband | Hyperband for 'mlr3' |
| mlr3learners | Recommended Learners for 'mlr3' |
| mlr3mbo | Flexible Bayesian Optimization |
| mlr3measures | Performance Measures for 'mlr3' |
| mlr3misc | Helper Functions for 'mlr3' |
| mlr3oml | Connector Between 'mlr3' and 'OpenML' |
| mlr3pipelines | Preprocessing Operators and Pipelines for 'mlr3' |
| mlr3resampling | Resampling Algorithms for 'mlr3' Framework |
| mlr3shiny | Machine Learning in 'shiny' with 'mlr3' |
| mlr3spatial | Support for Spatial Objects Within the 'mlr3' Ecosystem |
| mlr3spatiotempcv | Spatiotemporal Resampling Methods for 'mlr3' |
| mlr3summary | Model and Learner Summaries for 'mlr3' |
| mlr3superlearner | Super Learner Fitting and Prediction |
| mlr3torch | Deep Learning with 'mlr3' |
| mlr3tuning | Hyperparameter Optimization for 'mlr3' |
| mlr3tuningspaces | Search Spaces for 'mlr3' |
| mlr3verse | Easily Install and Load the 'mlr3' Package Family |
| mlr3viz | Visualizations for 'mlr3' |
| mlrCPO | Composable Preprocessing Operators and Pipelines for Machine Learning |
| mlrintermbo | Model-Based Optimization for 'mlr3' Through 'mlrMBO' |
| mlrMBO | Bayesian Optimization and Model-Based Optimization of Expensive Black-Box Functions |
| mlrpro | Stepwise Regression with Assumptions Checking |
| mlrv | Long-Run Variance Estimation in Time Series Regression |
| mlsbm | Efficient Estimation of Bayesian SBMs & MLSBMs |
| mlsjunkgen | Use the MLS Junk Generator Algorithm to Generate a Stream of Pseudo-Random Numbers |
| mlstrOpalr | Support Compatibility Between 'Maelstrom' R Packages and 'Opal' Environment |
| mlsurvlrnrs | R6-Based ML Survival Learners for 'mlexperiments' |
| mlt | Most Likely Transformations |
| mlt.docreg | Most Likely Transformations: Documentation and Regression Tests |
| mltest | Classification Evaluation Metrics |
| mltools | Machine Learning Tools |
| mlts | Multilevel Latent Time Series Models with 'R' and 'Stan' |
| mlVAR | Multi-Level Vector Autoregression |
| MLVSBM | A Stochastic Block Model for Multilevel Networks |
| mlxR | Simulation of Longitudinal Data |
| MLZ | Mean Length-Based Estimators of Mortality using TMB |
| MM | The Multiplicative Multinomial Distribution |
| MM2Sdata | Gene Expression Datasets for the 'MM2S' Package |
| MM4LMM | Inference of Linear Mixed Models Through MM Algorithm |
| mma | Multiple Mediation Analysis |
| mmabig | Multiple Mediation Analysis for Big Data Sets |
| MMAC | Data for Mathematical Modeling and Applied Calculus |
| MMAD | MM Algorithm Based on the Assembly-Decomposition Technology |
| mmand | Mathematical Morphology in Any Number of Dimensions |
| mmap | Map Pages of Memory |
| mmapcharr | Memory-Map Character Files |
| mmaqshiny | Explore Air-Quality Mobile-Monitoring Data |
| mMARCH.AC | Processing of Accelerometry Data with 'GGIR' in mMARCH |
| mmb | Arbitrary Dependency Mixed Multivariate Bayesian Models |
| mmc | Multivariate Measurement Error Correction |
| mmcards | Playing Cards Utility Functions |
| mmcif | Mixed Multivariate Cumulative Incidence Functions |
| mmcm | Modified Maximum Contrast Method |
| mmconvert | Mouse Map Converter |
| Mmcsd | Modeling Complex Longitudinal Data in a Quick and Easy Way |
| MMD | Minimal Multilocus Distance (MMD) for Source Attribution and Loci Selection |
| MMDai | Multivariate Multinomial Distribution Approximation and Imputation for Incomplete Categorical Data |
| MMDCopula | Robust Estimation of Copulas by Maximum Mean Discrepancy |
| MMDvariance | Detecting Differentially Variable Genes Using the Mixture of Marginal Distributions |
| mme | Multinomial Mixed Effects Models |
| mmeln | Estimation of Multinormal Mixture Distribution |
| MMeM | Multivariate Mixed Effects Model |
| MMGFM | Multi-Study Multi-Modality Generalized Factor Model |
| mmibain | Bayesian Informative Hypotheses Evaluation Web Applications |
| mmiCATs | Cluster Adjusted t Statistic Applications |
| MMINP | Microbe-Metabolite Interactions-Based Metabolic Profiles Predictor |
| mmints | Workflows for Building Web Applications |
| mmirestriktor | Informative Hypothesis Testing Web Applications |
| MMLR | Fitting Markov-Modulated Linear Regression Models |
| mmmgee | Simultaneous Inference for Multiple Linear Contrasts in GEE Models |
| MMOC | Multi-Omic Spectral Clustering using the Flag Manifold |
| mmod | Modern Measures of Population Differentiation |
| mmodely | Modeling Multivariate Origins Determinants - Evolutionary Lineages in Ecology |
| mMPA | Implementation of Marker-Assisted Mini-Pooling with Algorithm |
| mmpca | Integrative Analysis of Several Related Data Matrices |
| mmpp | Various Similarity and Distance Metrics for Marked Point Processes |
| mmr | Matrix Multiplication on Data.frames |
| MMRcaseselection | Case Classification and Selection Based on Regression Results |
| mmrm | Mixed Models for Repeated Measures |
| mmsample | Multivariate Matched Sampling |
| mmstat4 | Access to Teaching Materials from a ZIP File or GitHub |
| mmtsne | Multiple Maps t-SNE |
| MMVBVS | Missing Multivariate Bayesian Variable Selection |
| MMWRweek | Convert Dates to MMWR Day, Week, and Year |
| MN | Matrix Normal Distribution |
| MNARclust | Clustering Data with Non-Ignorable Missingness using Semi-Parametric Mixture Models |
| MNB | Diagnostic Tools for a Multivariate Negative Binomial Model |
| mnda | Multiplex Network Differential Analysis (MNDA) |
| mnet | Modeling Group Differences and Moderation Effects in Statistical Network Models |
| mnis | Easy Downloading Capabilities for the Members' Name Information Service |
| mniw | The Matrix-Normal Inverse-Wishart Distribution |
| mnlfa | Moderated Nonlinear Factor Analysis |
| MNLpred | Simulated Predicted Probabilities for Multinomial Logit Models |
| MNLR | Interactive Shiny Presentation for Working with Multinomial Logistic Regression |
| MNM | Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks |
| mnonr | A Generator of Multivariate Non-Normal Random Numbers |
| mnorm | Multivariate Normal Distribution |
| mnormt | The Multivariate Normal and t Distributions, and Their Truncated Versions |
| MNormTest | Multivariate Normal Hypothesis Testing |
| MNP | Fitting the Multinomial Probit Model |
| mnreadR | MNREAD Parameters Estimation and Curve Plotting |
| MNS | Mixed Neighbourhood Selection |
| mnt | Affine Invariant Tests of Multivariate Normality |
| mob | Monotonic Optimal Binning |
| mobilityIndexR | Calculates Transition Matrices and Mobility Indices |
| MoBPS | Modular Breeding Program Simulator |
| mobr | Measurement of Biodiversity |
| mobsim | Spatial Simulation and Scale-Dependent Analysis of Biodiversity Changes |
| moc.gapbk | Multi-Objective Clustering Algorithm Guided by a-Priori Biological Knowledge |
| MOCCA | Multi-Objective Optimization for Collecting Cluster Alternatives |
| MOCHA | Modeling for Single-Cell Open Chromatin Analysis |
| mockery | Mocking Library for R |
| mockr | Mocking in R |
| mockthat | Function Mocking for Unit Testing |
| mod | Lightweight and Self-Contained Modules for Code Organization |
| mod09nrt | Extraction of Bands from MODIS Surface Reflectance Product MOD09 NRT |
| mod2rm | Moderation Analysis for Two-Instance Repeated Measures Designs |
| modACDC | Association of Covariance for Detecting Differential Co-Expression |
| Modalclust | Hierarchical Modal Clustering |
| modeest | Mode Estimation |
| modehunt | Multiscale Analysis for Density Functions |
| model4you | Stratified and Personalised Models Based on Model-Based Trees and Forests |
| modelbased | Estimation of Model-Based Predictions, Contrasts and Means |
| modelbpp | Model BIC Posterior Probability |
| modelc | A Linear Model to 'SQL' Compiler |
| Modelcharts | Classification Model Charts |
| modeldata | Data Sets Useful for Modeling Examples |
| modeldatatoo | More Data Sets Useful for Modeling Examples |
| modeldb | Fits Models Inside the Database |
| modelDown | Make Static HTML Website for Predictive Models |
| modelenv | Provide Tools to Register Models for Use in 'tidymodels' |
| Modeler | Classes and Methods for Training and Using Binary Prediction Models |
| modelfactory | Combine Statistical Models into a Tibble for Comparison |
| modelfree | Model-Free Estimation of a Psychometric Function |
| modelgrid | A Framework for Creating, Managing and Training Multiple 'caret' Models |
| modelimpact | Functions to Assess the Business Impact of Churn Prediction Models |
| modeLLtest | Compare Models with Cross-Validated Log-Likelihood |
| ModelMap | Modeling and Map Production using Random Forest and Related Stochastic Models |
| ModelMatrixModel | Create Model Matrix and Save the Transforming Parameters |
| ModelMetrics | Rapid Calculation of Model Metrics |
| modelObj | A Model Object Framework for Regression Analysis |
| modelr | Modelling Functions that Work with the Pipe |
| modelSSE | Modelling Infectious Disease Superspreading from Contact Tracing Data |
| modelStudio | Interactive Studio for Explanatory Model Analysis |
| modelsummary | Summary Tables and Plots for Statistical Models and Data: Beautiful, Customizable, and Publication-Ready |
| modeltests | Testing Infrastructure for Broom Model Generics |
| modeltime | The Tidymodels Extension for Time Series Modeling |
| modeltime.ensemble | Ensemble Algorithms for Time Series Forecasting with Modeltime |
| modeltime.resample | Resampling Tools for Time Series Forecasting |
| modeltools | Tools and Classes for Statistical Models |
| modelwordcloud | Model Word Clouds |
| moder | Mode Estimation |
| moderate.mediation | Causal Moderated Mediation Analysis |
| moderndive | Tidyverse-Friendly Introductory Linear Regression |
| modernVA | An Implementation of Two Modern Education-Based Value-Added Models |
| modest | Model-Based Dose-Escalation Trials |
| ModEstM | Mode Estimation, Even in the Multimodal Case |
| modesto | Modeling and Analysis of Stochastic Systems |
| modEvA | Model Evaluation and Analysis |
| modgetxl | A 'shiny' Module for Reading Excel Sheets |
| modgo | Mock Data Generation |
| modi | Multivariate Outlier Detection and Imputation for Incomplete Survey Data |
| modifiedmk | Modified Versions of Mann Kendall and Spearman's Rho Trend Tests |
| modisfast | Fast and Efficient Access to MODIS Earth Observation Data |
| MODISTools | Interface to the 'MODIS Land Products Subsets' Web Services |
| modmarg | Calculating Marginal Effects and Levels with Errors |
| modMax | Community Structure Detection via Modularity Maximization |
| modnets | Modeling Moderated Networks |
| modopt.matlab | 'MatLab'-Style Modeling of Optimization Problems |
| modQR | Multiple-Output Directional Quantile Regression |
| modsem | Latent Interaction (and Moderation) Analysis in Structural Equation Models (SEM) |
| ModStatR | Statistical Modelling in Action with R |
| ModTools | Building Regression and Classification Models |
| modTurPoint | Estimate ED50 Based on Modified Turning Point Method |
| moduleColor | Basic Module Functions |
| modules | Self Contained Units of Source Code |
| MOEADr | Component-Wise MOEA/D Implementation |
| MoEClust | Gaussian Parsimonious Clustering Models with Covariates and a Noise Component |
| moexer | Interact with Moscow Exchange Informational and Statistical Server ('ISS') |
| MOFAT | Maximum One-Factor-at-a-Time Designs |
| mogavs | Multiobjective Genetic Algorithm for Variable Selection in Regression |
| mojson | A Serialization-Style Flattening and Description for JSON |
| mokken | Conducts Mokken Scale Analysis |
| molaR | Dental Surface Complexity Measurement Tools |
| MoLE | Modeling Language Evolution |
| MolgenisArmadillo | Armadillo Client for the Armadillo Service |
| MolgenisAuth | 'OpenID Connect' Discovery and Authentication |
| MOLHD | Multiple Objective Latin Hypercube Design |
| mombf | Model Selection with Bayesian Methods and Information Criteria |
| momentchi2 | Moment-Matching Methods for Weighted Sums of Chi-Squared Random Variables |
| momentfit | Methods of Moments |
| moments | Moments, Cumulants, Skewness, Kurtosis and Related Tests |
| momentuHMM | Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models |
| Momocs | Morphometrics using R |
| MomTrunc | Moments of Folded and Doubly Truncated Multivariate Distributions |
| monaco | The 'Monaco' Editor as a HTML Widget |
| monad | Operators and Generics for Monads |
| MoNAn | Mobility Network Analysis |
| monashtipr | An R API Wrapper for the Monash University Probabilistic Footy Tipping Competition |
| mondate | Keep Track of Dates in Terms of Months |
| Mondrian | A Simple Graphical Representation of the Relative Occurrence and Co-Occurrence of Events |
| MonetDB.R | Connect MonetDB to R |
| mongolite | Fast and Simple 'MongoDB' Client for R |
| mongopipe | Query MongoDB Documents with R |
| monitoR | Acoustic Template Detection in R |
| monitOS | Monitoring Overall Survival in Pivotal Trials in Indolent Cancers |
| monmlp | Multi-Layer Perceptron Neural Network with Optional Monotonicity Constraints |
| monobin | Monotonic Binning for Credit Rating Models |
| monobinShiny | Shiny User Interface for 'monobin' Package |
| monochromeR | Easily Create, View and Use Monochrome Colour Palettes |
| monoClust | Perform Monothetic Clustering with Extensions to Circular Data |
| monographaR | Taxonomic Monographs Tools |
| MonoInc | Monotonic Increasing |
| monolix2rx | Converts 'Monolix' Models to 'rxode2' |
| monomvn | Estimation for MVN and Student-t Data with Monotone Missingness |
| MonoPhy | Explore Monophyly of Taxonomic Groups in a Phylogeny |
| MonoPoly | Functions to Fit Monotone Polynomials |
| monoreg | Bayesian Monotonic Regression Using a Marked Point Process Construction |
| monotone | Performs Monotone Regression |
| MonotoneHazardRatio | Nonparametric Estimation and Inference of a Monotone Hazard Ratio Function |
| monotonicity | Test for Monotonicity in Expected Asset Returns, Sorted by Portfolios |
| monreg | Nonparametric Monotone Regression |
| Monte.Carlo.se | Monte Carlo Standard Errors |
| MonteCarlo | Automatic Parallelized Monte Carlo Simulations |
| MonteCarloSEM | Monte Carlo Data Simulation Package |
| moocore | Core Mathematical Functions for Multi-Objective Optimization |
| moodef | Defining 'Moodle' Elements from R |
| moodlequizR | Easily Create Fully Randomized 'Moodle' Test Questions |
| moodleR | Helper Functions to Work with 'Moodle' Data |
| moonBook | Functions and Datasets for the Book by Keon-Woong Moon |
| moose | Mean Squared Out-of-Sample Error Projection |
| mop | Mobility Oriented-Parity Metric |
| mopac | Collection of Datasets Pertaining to Loop 1 "Mopac" |
| MOQA | Basic Quality Data Assurance for Epidemiological Research |
| moranajp | Morphological Analysis for Japanese |
| moreparty | A Toolbox for Conditional Inference Trees and Random Forests |
| morepls | Interpretation Tools for Partial Least Squares Regression |
| morestopwords | All Stop Words in One Place |
| morph | 3D Segmentation of Voxels into Morphologic Classes |
| morphemepiece | Morpheme Tokenization |
| morphemepiece.data | Data for Morpheme Tokenization |
| Morpho | Calculations and Visualisations Related to Geometric Morphometrics |
| morphomap | Morphometric Maps, Bone Landmarking and Cross Sectional Geometry |
| MorphoRegions | Analysis of Regionalization Patterns in Serially Homologous Structures |
| Morphoscape | Computation and Visualization of Adaptive Landscapes |
| MorphoTools2 | Multivariate Morphometric Analysis |
| morrowplots | Historical Agricultural Data from the University of Illinois |
| morse | Modelling Reproduction and Survival Data in Ecotoxicology |
| mort | Identifying Potential Mortalities and Expelled Tags in Aquatic Acoustic Telemetry Arrays |
| mortAAR | Analysis of Archaeological Mortality Data |
| MortalityGaps | The Double-Gap Life Expectancy Forecasting Model |
| MortalityLaws | Parametric Mortality Models, Life Tables and HMD |
| MortalityTables | A Framework for Various Types of Mortality / Life Tables |
| MortCast | Estimation and Projection of Age-Specific Mortality Rates |
| mosaic | Project MOSAIC Statistics and Mathematics Teaching Utilities |
| mosaicCalc | R-Language Based Calculus Operations for Teaching |
| mosaicCore | Common Utilities for Other MOSAIC-Family Packages |
| mosaicData | Project MOSAIC Data Sets |
| mosaicModel | An Interface to Statistical Modeling Independent of Model Architecture |
| mosqcontrol | Mosquito Control Resource Optimization |
| MOST | Multiphase Optimization Strategy |
| mosum | Moving Sum Based Procedures for Changes in the Mean |
| MoTBFs | Learning Hybrid Bayesian Networks using Mixtures of Truncated Basis Functions |
| MOTE | Effect Size and Confidence Interval Calculator |
| motif | Local Pattern Analysis |
| motifcluster | Motif-Based Spectral Clustering of Weighted Directed Networks |
| motifr | Motif Analysis in Multi-Level Networks |
| motmot | Models of Trait Macroevolution on Trees |
| motoRneuron | Analyzing Paired Neuron Discharge Times for Time-Domain Synchronization |
| moult | Models for Analysing Moult in Birds |
| mountainplot | Mountain Plots, Folded Empirical Cumulative Distribution Plots |
| mousetRajectory | Mouse Trajectory Analyses for Behavioural Scientists |
| mousetrap | Process and Analyze Mouse-Tracking Data |
| move | Visualizing and Analyzing Animal Track Data |
| move2 | Processing and Analysing Animal Trajectories |
| movecost | Calculation of Slope-Dependant Accumulated Cost Surface, Least-Cost Paths, Least-Cost Corridors, Least-Cost Networks Related to Human Movement Across the Landscape |
| movegroup | Visualizing and Quantifying Space Use Data for Groups of Animals |
| moveHMM | Animal Movement Modelling using Hidden Markov Models |
| movementsync | Analysis and Visualisation of Musical Audio and Video Movement Synchrony Data |
| moveWindSpeed | Estimate Wind Speeds from Bird Trajectories |
| movieROC | Visualizing the Decision Rules Underlying Binary Classification |
| movMF | Mixtures of von Mises-Fisher Distributions |
| mp | Multidimensional Projection Techniques |
| mpactr | Correction of Preprocessed MS Data |
| mpae | Metodos Predictivos de Aprendizaje Estadistico (Statistical Learning Predictive Methods) |
| mpath | Regularized Linear Models |
| mpathr | Easily Handling Data from the ‘m-Path’ Platform |
| mpathsenser | Process and Analyse Data from m-Path Sense |
| MPBoost | Treatment Allocation in Clinical Trials by the Maximal Procedure |
| MPCI | Multivariate Process Capability Indices (MPCI) |
| MPCR | Multi- And Mixed-Precision Computations |
| MPDiR | Data Sets and Scripts for Modeling Psychophysical Data in R |
| MPGE | A Two-Step Approach to Testing Overall Effect of Gene-Environment Interaction for Multiple Phenotypes |
| MPI | Computation of Multidimensional Poverty Index (MPI) |
| mpindex | Multidimensional Poverty Index (MPI) |
| mpitbR | Calculate Alkire-Foster Multidimensional Poverty Measures |
| mplot | Graphical Model Stability and Variable Selection Procedures |
| MplusAutomation | An R Package for Facilitating Large-Scale Latent Variable Analyses in Mplus |
| mplusParallel.automation | Parallel Processing Automation for 'Mplus' |
| MplusTrees | Decision Trees with Structural Equation Models Fit in 'Mplus' |
| mpm | Multivariate Projection Methods |
| mpmcorrelogram | Multivariate Partial Mantel Correlogram |
| mpmi | Mixed-Pair Mutual Information Estimators |
| mpmsim | Simulation of Matrix Population Models with Defined Life History Characteristics |
| MPN | Most Probable Number and Other Microbial Enumeration Techniques |
| mpoly | Symbolic Computation and More with Multivariate Polynomials |
| mpower | Power Analysis via Monte Carlo Simulation for Correlated Data |
| mppR | Multi-Parent Population QTL Analysis |
| mpr | Multi-Parameter Regression (MPR) |
| MPS | Estimating Through the Maximum Product Spacing Approach |
| MPSEM | Modelling Phylogenetic Signals using Eigenvector Maps |
| mpspline2 | Mass-Preserving Spline Functions for Soil Data |
| MPsychoR | Modern Psychometrics with R |
| mpt | Multinomial Processing Tree Models |
| MPTinR | Analyze Multinomial Processing Tree Models |
| MPTmultiverse | Multiverse Analysis of Multinomial Processing Tree Models |
| MPV | Data Sets from Montgomery, Peck and Vining |
| mpwR | Standardized Comparison of Workflows in Mass Spectrometry-Based Bottom-Up Proteomics |
| MQMF | Modelling and Quantitative Methods in Fisheries |
| Mqrcm | M-Quantile Regression Coefficients Modeling |
| mr.pivw | Penalized Inverse-Variance Weighted Estimator for Mendelian Randomization |
| mr.raps | Two Sample Mendelian Randomization using Robust Adjusted Profile Score |
| MR.RGM | Multivariate Bidirectional Mendelian Randomization Networks |
| mratios | Ratios of Coefficients in the General Linear Model |
| mrbayes | Bayesian Summary Data Models for Mendelian Randomization Studies |
| mrbin | Metabolomics Data Analysis Functions |
| mrbsizeR | Scale Space Multiresolution Analysis of Random Signals |
| mRc | Multi-Visit Closed Population Mark-Recapture Estimates |
| MRCE | Multivariate Regression with Covariance Estimation |
| mrct | Outlier Detection of Functional Data Based on the Minimum Regularized Covariance Trace Estimator |
| MRCV | Methods for Analyzing Multiple Response Categorical Variables (MRCVs) |
| mrds | Mark-Recapture Distance Sampling |
| mreg | Fits Regression Models When the Outcome is Partially Missing |
| mregions2 | Access Data from Marineregions.org: Gazetteer & Data Products |
| mrf | Multiresolution Forecasting |
| mrf2d | Markov Random Field Models for Image Analysis |
| MRFA | Fitting and Predicting Large-Scale Nonlinear Regression Problems using Multi-Resolution Functional ANOVA (MRFA) Approach |
| MRFcov | Markov Random Fields with Additional Covariates |
| mrfDepth | Depth Measures in Multivariate, Regression and Functional Settings |
| mrfse | Markov Random Field Structure Estimator |
| MRG | Create Non-Confidential Multi-Resolution Grids |
| mrgsim.parallel | Simulate with 'mrgsolve' in Parallel |
| mrgsim.sa | Sensitivity Analysis with 'mrgsolve' |
| mrgsolve | Simulate from ODE-Based Models |
| MRHawkes | Multivariate Renewal Hawkes Process |
| mri | Modified Rand and Wallace Indices |
| mritc | MRI Tissue Classification |
| MRMCaov | Multi-Reader Multi-Case Analysis of Variance |
| MRMCsamplesize | Sample Size Estimations for Planning Multi-Reader Multi-Case (MRMC) Studies Without Pilot Data |
| MRmediation | A Causal Mediation Method with Methylated Region (MR) as the Mediator |
| mrMLM | Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for GWAS |
| mrMLM.GUI | Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study with Graphical User Interface |
| mRMRe | Parallelized Minimum Redundancy, Maximum Relevance (mRMR) |
| mro | Multiple Correlation |
| MRPC | PC Algorithm with the Principle of Mendelian Randomization |
| mRpostman | An IMAP Client for R |
| MRQoL | Minimal Clinically Important Difference and Response Shift Effect for Health-Related Quality of Life |
| MRReg | MDL Multiresolution Linear Regression Framework |
| mrregression | Regression Analysis for Very Large Data Sets via Merge and Reduce |
| MRS | Multi-Resolution Scanning for Cross-Sample Differences |
| MRTAnalysis | Primary and Secondary Analyses for Micro-Randomized Trials |
| MRTSampleSize | A Sample Size Calculator for Micro-Randomized Trials |
| MRTSampleSizeBinary | Sample Size Calculator for MRT with Binary Outcomes |
| MRZero | Diet Mendelian Randomization |
| msae | Multivariate Fay Herriot Models for Small Area Estimation |
| msaeHB | Multivariate Small Area Estimation using Hierarchical Bayesian Method |
| msaenet | Multi-Step Adaptive Estimation Methods for Sparse Regressions |
| msaFACE | Moving Subset Analysis FACE |
| msamp | Estimate Sample Size to Detect Bacterial Contamination in a Product Lot |
| msaR | Multiple Sequence Alignment for R Shiny |
| MSbox | Mass Spectrometry Tools |
| msBP | Multiscale Bernstein Polynomials for Densities |
| MSBStatsData | Data Sets for Courses at the Münster School of Business |
| msce | Hazard of Multi-Stage Clonal Expansion Models |
| mschart | Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint' Documents |
| MSclassifR | Automated Classification of Mass Spectra |
| MSclust | Multiple-Scaled Clustering |
| MSCMT | Multivariate Synthetic Control Method Using Time Series |
| MScombine | Combine Data from Positive and Negative Ionization Mode Finding Common Entities |
| mscp | Multiscale Change Point Detection via Gradual Bandwidth Adjustment in Moving Sum Processes |
| MSCquartets | Analyzing Gene Tree Quartets under the Multi-Species Coalescent |
| MSCsimtester | Tests of Multispecies Coalescent Gene Tree Simulator Output |
| mscstexta4r | R Client for the Microsoft Cognitive Services Text Analytics REST API |
| mscstts | R Client for the Microsoft Cognitive Services 'Text-to-Speech' REST API |
| mscsweblm4r | R Client for the Microsoft Cognitive Services Web Language Model REST API |
| msd | Method of Successive Dichotomizations |
| msde | Bayesian Inference for Multivariate Stochastic Differential Equations |
| msdrought | Seasonal Mid-Summer Drought Characteristics |
| mseapca | Metabolite Set Enrichment Analysis for Loadings |
| msentropy | Spectral Entropy for Mass Spectrometry Data |
| MSEtool | Management Strategy Evaluation Toolkit |
| MSG | Data and Functions for the Book Modern Statistical Graphics |
| MSGARCH | Markov-Switching GARCH Models |
| MSGARCHelm | Hybridization of MS-GARCH and ELM Model |
| msgpackR | A library to serialize or unserialize data in MessagePack format |
| msgps | Degrees of Freedom of Elastic Net, Adaptive Lasso and Generalized Elastic Net |
| msgr | Extends Messages, Warnings and Errors by Adding Levels and Log Files |
| mshap | Multiplicative SHAP Values for Two-Part Models |
| msig | An R Package for Exploring Molecular Signatures Database |
| msigdbr | MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format |
| MSigSeg | Multiple SIGnal SEGmentation |
| mSigTools | Mutational Signature Analysis Tools |
| mSimCC | Micro Simulation Model for Cervical Cancer Prevention |
| MSIMST | Bayesian Monotonic Single-Index Regression Model with the Skew-T Likelihood |
| MSinference | Multiscale Inference for Nonparametric Time Trend(s) |
| MSiP | 'MassSpectrometry' Interaction Prediction |
| msir | Model-Based Sliced Inverse Regression |
| mskcc.oncotree | Interface to the 'OncoTree' API |
| msltrend | Improved Techniques to Estimate Trend, Velocity and Acceleration from Sea Level Records |
| msm | Multi-State Markov and Hidden Markov Models in Continuous Time |
| msma | Multiblock Sparse Multivariable Analysis |
| msme | Functions and Datasets for "Methods of Statistical Model Estimation" |
| MSmix | Finite Mixtures of Mallows Models with Spearman Distance for Full and Partial Rankings |
| MSML | Model Selection Based on Machine Learning (ML) |
| MSMwRA | Multivariate Statistical Methods with R Applications |
| msos | Data Sets and Functions Used in Multivariate Statistics: Old School by John Marden |
| MSoutcomes | CORe Multiple Sclerosis Outcomes Toolkit |
| MSPRT | A Modified Sequential Probability Ratio Test (MSPRT) |
| MSRDT | Multi-State Reliability Demonstration Tests (MSRDT) |
| mssearchr | Library Search Against Electron Ionization Mass Spectral Databases |
| msSPChelpR | Helper Functions for Second Primary Cancer Analyses |
| MSSQL | Tools to Work with Microsoft SQL Server Databases via 'RODBC' |
| MST | Multivariate Survival Trees |
| mstate | Data Preparation, Estimation and Prediction in Multi-State Models |
| mStats | Epidemiological Data Analysis |
| mstclustering | "MST-Based Clustering" |
| mstDIF | A Collection of DIF Tests for Multistage Tests |
| mSTEM | Multiple Testing of Local Extrema for Detection of Change Points |
| MSTest | Hypothesis Testing for Markov Switching Models |
| mstherm | Analyze MS/MS Protein Melting Data |
| mstknnclust | MST-kNN Clustering Algorithm |
| mstR | Procedures to Generate Patterns under Multistage Testing |
| mstrio | Interface for 'MicroStrategy' REST API |
| mstudentd | Multivariate t Distribution |
| msu | Multivariate Symmetric Uncertainty and Other Measurements |
| MSwM | Fitting Markov Switching Models |
| mt | Metabolomics Data Analysis Toolbox |
| MTA | Multiscalar Territorial Analysis |
| MTAFT | Data-Driven Estimation for Multi-Threshold Accelerate Failure Time Model |
| mtanan | Single Valued Neutrosophic Kruskal-Wallis and Mann Whitney Tests |
| MTAR | Multi-Trait Analysis of Rare-Variant Association Study |
| mtarm | Bayesian Estimation of Multivariate Threshold Autoregressive Models |
| mtb | My Toolbox for Assisting Document Editing and Data Presenting |
| mtdesign | Mander and Thompson Designs |
| MTDrh | Mass Transportation Distance Rank Histogram |
| MTE | Maximum Tangent Likelihood Estimation for Robust Linear Regression and Variable Selection |
| MTest | A Procedure for Multicollinearity Testing using Bootstrap |
| mthapower | Sample Size and Power for Association Studies Involving Mitochondrial DNA Haplogroups |
| mtlgmm | Unsupervised Multi-Task and Transfer Learning on Gaussian Mixture Models |
| MTLR | Survival Prediction with Multi-Task Logistic Regression |
| MTPS | Multi-Task Prediction using Stacking Algorithms |
| MtreeRing | A Shiny Application for Automatic Measurements of Tree-Ring Widths on Digital Images |
| MTS | All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models |
| mtsdi | Multivariate Time Series Data Imputation |
| mtsta | Accessing the Red List of Montane Tree Species of the Tropical Andes |
| MTSYS | Methods in Mahalanobis-Taguchi (MT) System |
| mtvc | Multiple Counting Process Structure for Survival Analysis |
| MUACz | Generate MUAC and BMI z-Scores and Percentiles for Children and Adolescents |
| MuChPoint | Multiple Change Point |
| muckrock | Data on Freedom of Information Act Requests |
| mudfold | Multiple UniDimensional unFOLDing |
| mueRelativeRisk | Relative Risk Based on the Ratio of Median Unbiased Estimates |
| muhaz | Hazard Function Estimation in Survival Analysis |
| muir | Exploring Data with Tree Data Structures |
| mulea | Enrichment Analysis Using Multiple Ontologies and False Discovery Rate |
| mulgar | Functions for Pre-Processing Data for Multivariate Data Visualisation using Tours |
| MullerPlot | Generates Muller Plot from Population/Abundance/Frequency Dynamics Data |
| mully | Create, Modify and Visualize Multi-Layered Networks |
| mulSEM | Some Multivariate Analyses using Structural Equation Modeling |
| mulset | Multiset Intersection Generator |
| mult.latent.reg | Regression and Clustering in Multivariate Response Scenarios |
| MultAlloc | Optimal Allocation in Stratified Sampling |
| MultBiplotR | Multivariate Analysis Using Biplots in R |
| multbxxc | Auxiliary Routines for Influx Software |
| multcomp | Simultaneous Inference in General Parametric Models |
| multcompView | Visualizations of Paired Comparisons |
| multDM | Multivariate Version of the Diebold-Mariano Test |
| multe | Multiple Treatment Effects Regression |
| MultEq | Multiple Equivalence Tests and Simultaneous Confidence Intervals |
| multfisher | Optimal Exact Tests for Multiple Binary Endpoints |
| multgee | GEE Solver for Correlated Nominal or Ordinal Multinomial Responses |
| multiActionButton | Multi Action Button for 'Shiny' Applications |
| multiApply | Apply Functions to Multiple Multidimensional Arrays or Vectors |
| multiAssetOptions | Finite Difference Method for Multi-Asset Option Valuation |
| MultiATSM | Multicountry Term Structure of Interest Rates Models |
| MultiBD | Multivariate Birth-Death Processes |
| multibias | Simultaneous Multi-Bias Adjustment |
| multibiasmeta | Sensitivity Analysis for Multiple Biases in Meta-Analyses |
| multibiplotGUI | Multibiplot Analysis in R |
| multiblock | Multiblock Data Fusion in Statistics and Machine Learning |
| multibreakeR | Tests for a Structural Change in Multivariate Time Series |
| multibridge | Evaluating Multinomial Order Restrictions with Bridge Sampling |
| multiCA | Multinomial Cochran-Armitage Trend Test |
| multicastR | A Companion to the Multi-CAST Collection |
| multichull | A Generic Convex-Hull-Based Model Selection Method |
| multiclassPairs | Build MultiClass Pair-Based Classifiers using TSPs or RF |
| MultiClassROC | ROC Curves for Multi-Class Analysis |
| multicmp | Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution |
| MultiCOAP | High-Dimensional Covariate-Augmented Overdispersed Multi-Study Poisson Factor Model |
| multiColl | Collinearity Detection in a Multiple Linear Regression Model |
| multicool | Permutations of Multisets in Cool-Lex Order |
| multid | Multivariate Difference Between Two Groups |
| multiDimBio | Multivariate Analysis and Visualization for Biological Data |
| multiDoE | Multi-Criteria Design of Experiments for Optimal Design |
| multidplyr | A Multi-Process 'dplyr' Backend |
| multifamm | Multivariate Functional Additive Mixed Models |
| multiFANOVA | Multiple Contrast Tests for Functional Data |
| multifear | Multiverse Analyses for Conditioning Data |
| MultiFit | Multiscale Fisher's Independence Test for Multivariate Dependence |
| multifunc | Analysis of Ecological Drivers on Ecosystem Multifunctionality |
| multifwf | Read Fixed Width Format Files Containing Lines of Different Type |
| MultiGlarmaVarSel | Variable Selection in Sparse Multivariate GLARMA Models |
| multigraph | Plot and Manipulate Multigraphs |
| multigraphr | Probability Models and Statistical Analysis of Random Multigraphs |
| MultiGroupO | MultiGroup Method and Simulation Data Analysis |
| MultiGroupSequential | Group-Sequential Procedures with Multiple Hypotheses |
| MultiJoin | Enables Efficient Joining of Data File on Common Fields using the Unix Utility Join |
| MultiKink | Estimation and Inference for Multi-Kink Quantile Regression |
| multilaterals | Transitive Index Numbers for Cross-Sections and Panel Data |
| MultiLCIRT | Multidimensional Latent Class Item Response Theory Models |
| multilevel | Multilevel Functions |
| multilevelcoda | Estimate Bayesian Multilevel Models for Compositional Data |
| multilevelmediation | Utility Functions for Multilevel Mediation Analysis |
| multilevelmod | Model Wrappers for Multi-Level Models |
| multilevelPSA | Multilevel Propensity Score Analysis |
| multilevelTools | Multilevel and Mixed Effects Model Diagnostics and Effect Sizes |
| multilevLCA | Estimates and Plots Single-Level and Multilevel Latent Class Models |
| multilinguer | Gentle Language Installer for R User |
| multilink | Multifile Record Linkage and Duplicate Detection |
| multimark | Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks |
| multiMarker | Latent Variable Model to Infer Food Intake from Multiple Biomarkers |
| multimedia | Multimodal Mediation Analysis |
| multimix | Fit Mixture Models Using the Expectation Maximisation (EM) Algorithm |
| multimode | Mode Testing and Exploring |
| multimorbidity | Harmonizing Various Comorbidity, Multimorbidity, and Frailty Measures |
| multiness | MULTIplex NEtworks with Shared Structure |
| multinet | Analysis and mining of multilayer social networks |
| multinets | Multilevel Networks Analysis |
| multinma | Bayesian Network Meta-Analysis of Individual and Aggregate Data |
| MultinomialCI | Simultaneous Confidence Intervals for Multinomial Proportions According to the Method by Sison and Glaz |
| multinomialLogitMix | Clustering Multinomial Count Data under the Presence of Covariates |
| multinomineq | Bayesian Inference for Multinomial Models with Inequality Constraints |
| multIntTestFunc | Provides Test Functions for Multivariate Integration |
| MultiObjMatch | Multi-Objective Matching Algorithm |
| multiocc | Fits Multivariate Spatio-Temporal Occupancy Model |
| MultiOrd | Generation of Multivariate Ordinal Variates |
| multipanelfigure | Infrastructure to Assemble Multi-Panel Figures (from Grobs) |
| MultiPhen | A Package to Test for Multi-Trait Association |
| MultipleBreakpoints | Estimating Multiple Breakpoints for a Sequence of Realizations of Bernoulli Variables |
| MultipleBubbles | Test and Detection of Explosive Behaviors for Time Series |
| multipleDL | Addressing Detection Limits by Cumulative Probability Models (CPMs) |
| multipleNCC | Weighted Cox-Regression for Nested Case-Control Data |
| multipleOutcomes | Asymptotic Covariance Matrix of Regression Models for Multiple Outcomes |
| MultipleRegression | Multiple Regression Analysis |
| multiplestressR | Additive and Multiplicative Null Models for Multiple Stressor Data |
| multiplex | Algebraic Tools for the Analysis of Multiple Social Networks |
| MultiplierDEA | Multiplier Data Envelopment Analysis and Cross Efficiency |
| multipol | Multivariate Polynomials |
| multiRDPG | Multiple Random Dot Product Graphs |
| multirich | Calculate Multivariate Richness via UTC and sUTC |
| multiridge | Fast Cross-Validation for Multi-Penalty Ridge Regression |
| MultiRNG | Multivariate Pseudo-Random Number Generation |
| MultiRobust | Multiply Robust Methods for Missing Data Problems |
| multiROC | Calculating and Visualizing ROC and PR Curves Across Multi-Class Classifications |
| MultiRR | Bias, Precision, and Power for Multi-Level Random Regressions |
| MultIS | Reconstruction of Clones from Integration Site Readouts and Visualization |
| MultiscaleDTM | Multi-Scale Geomorphometric Terrain Attributes |
| multiselect | Selecting Combinations of Predictors by Leveraging Multiple AUCs for an Ordered Multilevel Outcome |
| multisensi | Multivariate Sensitivity Analysis |
| multisite.accuracy | Estimation of Accuracy in Multisite Machine-Learning Models |
| MultisiteMediation | Causal Mediation Analysis in Multisite Trials |
| MultiSkew | Measures, Tests and Removes Multivariate Skewness |
| multisom | Clustering a Data Set using Multi-SOM Algorithm |
| multispatialCCM | Multispatial Convergent Cross Mapping |
| MultiStatM | Multivariate Statistical Methods |
| multitaper | Spectral Analysis Tools using the Multitaper Method |
| multitool | Run Multiverse Style Analyses |
| multiUS | Functions for the Courses Multivariate Analysis and Computer Intensive Methods |
| multivar | Penalized Estimation of Multiple-Subject Vector Autoregressive (multi-VAR) Models |
| multivariance | Measuring Multivariate Dependence Using Distance Multivariance |
| MultivariateAnalysis | Pacote Para Analise Multivariada |
| MultivariateRandomForest | Models Multivariate Cases Using Random Forests |
| multivarious | Extensible Data Structures for Multivariate Analysis |
| MultiVarMI | Multiple Imputation for Multivariate Data |
| MultiVarSel | Variable Selection in a Multivariate Linear Model |
| multivator | A Multivariate Emulator |
| multiverse | Create 'multiverse analysis' in R |
| multiview | Cooperative Learning for Multi-View Analysis |
| multiwave | Estimation of Multivariate Long-Memory Models Parameters |
| multiway | Component Models for Multi-Way Data |
| MultiwayRegression | Perform Tensor-on-Tensor Regression |
| multiwayvcov | Multi-Way Standard Error Clustering |
| MultNonParam | Multivariate Nonparametric Methods |
| MultOrdRS | Model Multivariate Ordinal Responses Including Response Styles |
| multpois | Analyze Nominal Response Data with the Multinomial-Poisson Trick |
| MultRegCMP | Bayesian Multivariate Conway-Maxwell-Poisson Regression Model for Correlated Count Data |
| MultSurvTests | Permutation Tests for Multivariate Survival Analysis |
| multxpert | Common Multiple Testing Procedures and Gatekeeping Procedures |
| MulvariateRandomForestVarImp | Variable Importance Measures for Multivariate Random Forests |
| MuMIn | Multi-Model Inference |
| munfold | Metric Unfolding |
| munsell | Utilities for Using Munsell Colours |
| munsellinterpol | Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB |
| muRL | Mailmerge using R, LaTeX, and the Web |
| murphydiagram | Murphy Diagrams for Forecast Comparisons |
| muRty | Murty's Algorithm for k-Best Assignments |
| MUS | Monetary Unit Sampling and Estimation Methods, Widely Used in Auditing |
| musclesyneRgies | Extract Muscle Synergies from Electromyography |
| music | Learn and Experiment with Music Theory |
| musica | Multiscale Climate Model Assessment |
| musicNMR | Conversion of Nuclear Magnetic Resonance Spectra in Audio Files |
| mutationtypes | Validate and Convert Mutational Impacts Using Standard Genomic Dictionaries |
| mutoss | Unified Multiple Testing Procedures |
| mutossGUI | A Graphical User Interface for the MuToss Project |
| mutSignatures | Decipher Mutational Signatures from Somatic Mutational Catalogs |
| mutualinf | Computation and Decomposition of the Mutual Information Index |
| MuViCP | MultiClass Visualizable Classification using Combination of Projections |
| MUVR2 | Multivariate Methods with Unbiased Variable Selection |
| MVA | An Introduction to Applied Multivariate Analysis with R |
| mvabund | Statistical Methods for Analysing Multivariate Abundance Data |
| MVar | Multivariate Analysis |
| MVar.pt | Analise multivariada (brazilian portuguese) |
| MvBinary | Modelling Multivariate Binary Data with Blocks of Specific One-Factor Distribution |
| mvbutils | Workspace Organization, Code and Documentation Editing, Package Prep and Editing, Etc |
| mvcauchy | Multivariate Cauchy Distribution |
| mvcor | Correlation Coefficients for Multivariate Data |
| mvctm | Multivariate Variance Components Tests for Multilevel Data |
| mvdalab | Multivariate Data Analysis Laboratory |
| mvDFA | Multivariate Detrended Fluctuation Analysis |
| MVET | Multivariate Estimates and Tests |
| mvgam | Multivariate (Dynamic) Generalized Additive Models |
| mvgb | Multivariate Probabilities of Scale Mixtures of Multivariate Normal Distributions via the Genz and Bretz (2002) QRSVN Method |
| mvglmmRank | Multivariate Generalized Linear Mixed Models for Ranking Sports Teams |
| mvGPS | Causal Inference using Multivariate Generalized Propensity Score |
| mvhist | Multivariate Histograms |
| mvhtests | Multivariate Hypothesis Tests |
| mvinfluence | Influence Measures and Diagnostic Plots for Multivariate Linear Models |
| MVisAGe | Compute and Visualize Bivariate Associations |
| MVLM | Multivariate Linear Model with Analytic p-Values |
| mvLSW | Multivariate, Locally Stationary Wavelet Process Estimation |
| mvLSWimpute | Imputation Methods for Multivariate Locally Stationary Time Series |
| mvMAPIT | Multivariate Genome Wide Marginal Epistasis Test |
| mvmesh | Multivariate Meshes and Histograms in Arbitrary Dimensions |
| mvmeta | Multivariate and Univariate Meta-Analysis and Meta-Regression |
| mvMISE | A General Framework of Multivariate Mixed-Effects Selection Models |
| mvMonitoring | Multi-State Adaptive Dynamic Principal Component Analysis for Multivariate Process Monitoring |
| mvMORPH | Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data |
| MVN | Multivariate Normality Tests |
| mvna | Nelson-Aalen Estimator of the Cumulative Hazard in Multistate Models |
| MVNBayesian | Bayesian Analysis Framework for MVN (Mixture) Distribution |
| mvnfast | Fast Multivariate Normal and Student's t Methods |
| mvngGrAd | Moving Grid Adjustment in Plant Breeding Field Trials |
| mvnimpute | Simultaneously Impute the Missing and Censored Values |
| mvnmle | ML Estimation for Multivariate Normal Data with Missing Values |
| mvnormalTest | Powerful Tests for Multivariate Normality |
| mvnormtest | Normality Test for Multivariate Variables |
| mvnpermute | Generate New Multivariate Normal Samples from Permutations |
| mvnTest | Goodness of Fit Tests for Multivariate Normality |
| MVNtestchar | Test for Multivariate Normal Distribution Based on a Characterization |
| mvord | Multivariate Ordinal Regression Models |
| mvoutlier | Multivariate Outlier Detection Based on Robust Methods |
| mvp | Fast Symbolic Multivariate Polynomials |
| MVPBT | Publication Bias Tests for Meta-Analysis of Diagnostic Accuracy Test |
| mvpd | Multivariate Product Distributions for Elliptically Contoured Distributions |
| mvProbit | Multivariate Probit Models |
| mvQuad | Methods for Multivariate Quadrature |
| MVQuickGraphs | Quick Multivariate Graphs |
| MVR | Mean-Variance Regularization |
| mvrsquared | Compute the Coefficient of Determination for Vector or Matrix Outcomes |
| mvs | Methods for High-Dimensional Multi-View Learning |
| mvShapiroTest | Generalized Shapiro-Wilk test for multivariate normality |
| mvSLOUCH | Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses |
| mvst | Bayesian Inference for the Multivariate Skew-t Model |
| mvSUSY | Multivariate Surrogate Synchrony |
| MVT | Estimation and Testing for the Multivariate t-Distribution |
| MVTests | Multivariate Hypothesis Tests |
| mvtmeta | Multivariate Meta-Analysis |
| mvtnorm | Multivariate Normal and t Distributions |
| mvtsplot | Multivariate Time Series Plot |
| mvvg | Matrix-Variate Variance-Gamma Distribution |
| mwa | Causal Inference in Spatiotemporal Event Data |
| mwcsr | Solvers for Maximum Weight Connected Subgraph Problem and Its Variants |
| mwlaxeref | Cross-References Lake Identifiers Between Different Data Sets |
| MWright | Mainardi-Wright Family of Distributions |
| mwshiny | 'Shiny' for Multiple Windows |
| mwTensor | Multi-Way Component Analysis |
| mxcc | Maxwell Control Charts |
| mxfda | A Functional Data Analysis Package for Spatial Single Cell Data |
| mxkssd | Efficient Mixed-Level k-Circulant Supersaturated Designs |
| mxmmod | Measurement Model of Derivatives in 'OpenMx' |
| mxnorm | Apply Normalization Methods to Multiplexed Images |
| mxsem | Specify 'OpenMx' Models with a 'lavaan'-Style Syntax |
| My.stepwise | Stepwise Variable Selection Procedures for Regression Analysis |
| mycaas | My Computerized Adaptive Assessment |
| Mychisq | Chi-Squared Test for Goodness of Fit and Independence Test |
| myClim | Microclimatic Data Processing |
| mycobacrvR | Integrative Immunoinformatics for Mycobacterial Diseases in R Platform |
| mycor | Automatic Correlation and Regression Test in a 'data.frame' |
| myCRAN | Graph of Daily and Cumulative Downloads of your Packages |
| mzipmed | Mediation using MZIP Model |
| n1qn1 | Port of the 'Scilab' 'n1qn1' Module for Unconstrained BFGS Optimization |
| N2H4 | Handling Methods for Naver News Text Crawling |
| N2R | Fast and Scalable Approximate k-Nearest Neighbor Search Methods using 'N2' Library |
| na.tools | Comprehensive Library for Working with Missing (NA) Values in Vectors |
| naaccr | Read Cancer Records in the NAACCR Format |
| nabor | Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions |
| NAC | Network-Adjusted Covariates for Community Detection |
| NACHO | NanoString Quality Control Dashboard |
| NADA | Nondetects and Data Analysis for Environmental Data |
| NADA2 | Data Analysis for Censored Environmental Data |
| nadiv | (Non)Additive Genetic Relatedness Matrices |
| NAEPirtparams | IRT Parameters for the National Assessment of Education Progress |
| NAEPprimer | The NAEP Primer |
| naflex | Flexible Options for Handling Missing Values |
| naijR | Operations to Ease Data Analyses Specific to Nigeria |
| NaileR | Interpreting Latent Variables with AI |
| NAIR | Network Analysis of Immune Repertoire |
| naive | Empirical Extrapolation of Time Feature Patterns |
| naivebayes | High Performance Implementation of the Naive Bayes Algorithm |
| naivereg | Nonparametric Additive Instrumental Variable Estimator and Related IV Methods |
| nakagami | Functions for the Nakagami Distribution |
| NAM | Nested Association Mapping |
| name | Tools for Working with Names |
| namedropR | Create Visual Citations for Presentations and Posters |
| NameNeedle | Using Needleman-Wunsch to Match Sample Names |
| namer | Names Your 'R Markdown' Chunks |
| nametagger | Named Entity Recognition in Texts using 'NameTag' |
| nandb | Number and Brightness Image Analysis |
| naniar | Data Structures, Summaries, and Visualisations for Missing Data |
| nanoarrow | Interface to the 'nanoarrow' 'C' Library |
| nanonext | NNG (Nanomsg Next Gen) Lightweight Messaging Library |
| nanoparquet | Read and Write 'Parquet' Files |
| nanostringr | Performs Quality Control, Data Normalization, and Batch Effect Correction for 'NanoString nCounter' Data |
| nanotime | Nanosecond-Resolution Time Support for R |
| NAP | Non-Local Alternative Priors in Psychology |
| naptanr | Call the 'NaPTAN' API Through R |
| naptime | A Flexible and Robust Sys.sleep() Replacement |
| nardl | Nonlinear Cointegrating Autoregressive Distributed Lag Model |
| narray | Subset- And Name-Aware Array Utility Functions |
| naryn | Native Access Medical Record Retriever for High Yield Analytics |
| nasadata | Interface to Various NASA API's |
| nasapower | NASA POWER API Client |
| nasaweather | Collection of datasets from the ASA 2006 data expo |
| nascaR.data | NASCAR Race Data |
| NasdaqDataLink | API Wrapper for Nasdaq Data Link |
| naspaclust | Nature-Inspired Spatial Clustering |
| nat | NeuroAnatomy Toolbox for Analysis of 3D Image Data |
| nat.nblast | NeuroAnatomy Toolbox ('nat') Extension for Assessing Neuron Similarity and Clustering |
| nat.templatebrains | NeuroAnatomy Toolbox ('nat') Extension for Handling Template Brains |
| nat.utils | File System Utility Functions for 'NeuroAnatomy Toolbox' |
| natcpp | Fast C++ Primitives for the 'NeuroAnatomy Toolbox' |
| natmanager | Install the 'Natverse' Packages from Scratch |
| NatParksPalettes | Color Palettes Inspired by National Parks |
| natserv | 'NatureServe' Interface |
| natstrat | Obtain Unweighted Natural Strata that Balance Many Covariates |
| natural | Estimating the Error Variance in a High-Dimensional Linear Model |
| naturaList | Classify Occurrences by Confidence Levels in the Species ID |
| naturalsort | Natural Ordering |
| NatureSounds | Animal Sounds for Bioacustic Analysis |
| navigation | Analyze the Impact of Sensor Error Modelling on Navigation Performance |
| navigatr | Navigation Menu for Pipe-Friendly Data Processing |
| nawtilus | Navigated Weighting for the Inverse Probability Weighting |
| NB.MClust | Negative Binomial Model-Based Clustering |
| NBAloveR | Help Basketball Data Analysis |
| nbapalettes | An NBA Jersey Palette Generator |
| NBBDesigns | Neighbour Balanced Block Designs (NBBDesigns) |
| nbc4va | Bayes Classifier for Verbal Autopsy Data |
| NbClust | Determining the Best Number of Clusters in a Data Set |
| nbconv | Evaluate Arbitrary Negative Binomial Convolutions |
| nbconvertR | Vignette Engine Wrapping Jupyter Notebooks |
| NBDdirichlet | NBD-Dirichlet Model of Consumer Buying Behavior for Marketing Research |
| NBDesign | Design and Monitoring of Clinical Trials with Negative Binomial Endpoint |
| nberwp | NBER Working Papers |
| nbfar | Negative Binomial Factor Regression Models ('nbfar') |
| NBLDA | Negative Binomial Linear Discriminant Analysis |
| nblR | Data Extraction of Australian NBL Basketball Statistics |
| nbody | Gravitational N-Body Simulation |
| nbpMatching | Functions for Optimal Non-Bipartite Matching |
| NBPSeq | Negative Binomial Models for RNA-Sequencing Data |
| NBR | Network-Based R-Statistics using Mixed Effects Models |
| NBShiny | Interactive Document for Working with Naive Bayes Classification |
| NBShiny2 | Interactive Document for Working with Naive Bayes Classification |
| NBShiny3 | Interactive Document for Working with Naive Bayes Classification |
| nbTransmission | Naive Bayes Transmission Analysis |
| NBtsVarSel | Variable Selection in a Specific Regression Time Series of Counts |
| nc | Named Capture to Data Tables |
| NCA | Necessary Condition Analysis |
| ncappc | NCA Calculations and Population Model Diagnosis |
| ncar | Noncompartmental Analysis for Pharmacokinetic Report |
| ncbit | Retrieve and Build NBCI Taxonomic Data |
| NCC | Simulation and Analysis of Platform Trials with Non-Concurrent Controls |
| ncdf4 | Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files |
| ncdf4.helpers | Helper Functions for Use with the 'ncdf4' Package |
| ncdfCF | Easy Access to NetCDF Files with CF Metadata Conventions |
| ncdfgeom | 'NetCDF' Geometry and Time Series |
| ncdump | Extract Metadata from 'NetCDF' Files as Data Frames |
| ncf | Spatial Covariance Functions |
| ncmeta | Straightforward 'NetCDF' Metadata |
| NCmisc | Miscellaneous Functions for Creating Adaptive Functions and Scripts |
| ncodeR | Techniques for Automated Classifiers |
| ncpen | Unified Algorithm for Non-convex Penalized Estimation for Generalized Linear Models |
| NCSampling | Nearest Centroid (NC) Sampling |
| NCSCopula | Non-Central Squared Copula Models Estimation |
| NCutYX | Clustering of Omics Data of Multiple Types with a Multilayer Network Representation |
| ncvreg | Regularization Paths for SCAD and MCP Penalized Regression Models |
| nda | Generalized Network-Based Dimensionality Reduction and Analysis |
| ndi | Neighborhood Deprivation Indices |
| ndjson | Wicked-Fast Streaming 'JSON' ('ndjson') Reader |
| ndl | Naive Discriminative Learning |
| NDP | Interactive Presentation for Working with Normal Distribution |
| ndtv | Network Dynamic Temporal Visualizations |
| nearfar | Near-Far Matching |
| neat | Efficient Network Enrichment Analysis Test |
| neatmaps | Heatmaps for Multiple Network Data |
| neatR | Neat Data for Presentation |
| neatRanges | Tidy Up Date/Time Ranges |
| neatStats | Neat and Painless Statistical Reporting |
| nebula | Negative Binomial Mixed Models Using Large-Sample Approximation for Differential Expression Analysis of ScRNA-Seq Data |
| Necklaces | Necklaces and Bracelets |
| necountries | Countries of the World |
| needmining | A Simple Needmining Implementation |
| needs | Attaches and Installs Packages |
| NegativeControlOutcomeAdjustment | Estimation of Vaccine Efficacy using Negative Control Outcomes |
| NegBinBetaBinreg | Negative Binomial and Beta Binomial Bayesian Regression Models |
| negenes | Estimating the Number of Essential Genes in a Genome |
| negligible | A Collection of Functions for Negligible Effect/Equivalence Testing |
| Neighboot | Neighborhood Bootstrap Method for RDS |
| neighbours | Neighbourhood Functions for Local-Search Algorithms |
| neighbr | Classification, Regression, Clustering with K Nearest Neighbors |
| neldermead | R Port of the 'Scilab' Neldermead Module |
| nemBM | Using Network Evolution Models to Generate Networks with Selected Blockmodel Type |
| nemtr | Nonparametric Extended Median Test - Cumulative Summation Method |
| neo2R | Neo4j to R |
| neo4jshell | Querying and Managing 'Neo4J' Databases in 'R' |
| neo4r | A 'Neo4J' Driver |
| neodistr | Neo-Normal Distribution |
| neojags | Neo-Normal Distributions Family for Markov Chain Monte Carlo (MCMC) Models in 'JAGS' |
| NEONiso | Tools to Calibrate and Work with NEON Atmospheric Isotope Data |
| neonOS | Basic Data Wrangling for NEON Observational Data |
| neonPlantEcology | Process NEON Plant Data for Ecological Analysis |
| neonSoilFlux | Compute Soil Carbon Fluxes for the National Ecological Observatory Network Sites |
| neonstore | NEON Data Store |
| neonUtilities | Utilities for Working with NEON Data |
| neotoma2 | Working with the Neotoma Paleoecology Database |
| nephro | Utilities for Nephrology |
| NEpiC | Network Assisted Algorithm for Epigenetic Studies Using Mean and Variance Combined Signals |
| neptune | MLOps Metadata Store - Experiment Tracking and Model Registry for Production Teams |
| nesRdata | National Eutrophication Survey Data |
| nestcolor | Colors for NEST Graphs |
| NestedCategBayesImpute | Modeling, Imputing and Generating Synthetic Versions of Nested Categorical Data in the Presence of Impossible Combinations |
| nestedcv | Nested Cross-Validation with 'glmnet' and 'caret' |
| nestedLogit | Nested Dichotomy Logistic Regression Models |
| NestedMenu | A Nested Menu Widget for 'Shiny' Applications |
| nestedmodels | Tidy Modelling for Nested Data |
| nestedpp | Performance Profiles and Nested Performance Profiles |
| nestfs | Cross-Validated (Nested) Forward Selection |
| NestMRMC | Single Reader Between-Cases AUC Estimator in Nested Data |
| nestr | Build Nesting or Hierarchical Structures |
| net4pg | Handle Ambiguity of Protein Identifications from Shotgun Proteomics |
| netassoc | Inference of Species Associations from Co-Occurrence Data |
| netClust | Model-Based Clustering of Network Data |
| NetCluster | Clustering for networks |
| netcmc | Spatio-Network Generalised Linear Mixed Models for Areal Unit and Network Data |
| netCoin | Interactive Analytic Networks |
| netcom | NETwork COMparison Inference |
| netcontrol | Control Theory Methods for Networks |
| NetCoupler | Inference of Causal Links Between a Network and an External Variable |
| NetDA | Network-Based Discriminant Analysis Subject to Multi-Label Classes |
| netdiffuseR | Analysis of Diffusion and Contagion Processes on Networks |
| NetExplorer | Network Explorer |
| NetFACS | Network Applications to Facial Communication Data |
| netgsa | Network-Based Gene Set Analysis |
| netgwas | Network-Based Genome Wide Association Studies |
| netie | Antigen T Cell Interaction Estimation |
| NetIndices | Estimating Network Indices, Including Trophic Structure of Foodwebs in R |
| NetInt | Methods for Unweighted and Weighted Network Integration |
| NetLogoR | Build and Run Spatially Explicit Agent-Based Models |
| netmap | Represent Network Objects on a Map |
| netmediate | Micro-Macro Analysis for Social Networks |
| netmeta | Network Meta-Analysis using Frequentist Methods |
| netmhc2pan | Interface to 'NetMHCIIpan' |
| NetMix | Dynamic Mixed-Membership Network Regression Model |
| NetOrigin | Origin Estimation for Propagation Processes on Complex Networks |
| netplot | Beautiful Graph Drawing |
| NetPreProc | Network Pre-Processing and Normalization |
| netrankr | Analyzing Partial Rankings in Networks |
| netregR | Regression of Network Responses |
| NetRep | Permutation Testing Network Module Preservation Across Datasets |
| netropy | Statistical Entropy Analysis of Network Data |
| nets | Network Estimation for Time Series |
| NetSci | Calculates Basic Network Measures Commonly Used in Network Medicine |
| netseer | Graph Prediction from a Graph Time Series |
| netseg | Measures of Network Segregation and Homophily |
| netSEM | Network Structural Equation Modeling |
| netShiny | Tool for Comparison and Visualization of Multiple Networks |
| NetSimR | Actuarial Functions for Non-Life Insurance Modelling |
| netstat | Retrieve Network Statistics Including Available TCP Ports |
| NetSwan | Network Strengths and Weaknesses Analysis |
| nett | Network Analysis and Community Detection |
| nettskjemar | Connect to the 'nettskjema.no' API of the University of Oslo |
| netUtils | A Collection of Tools for Network Analysis |
| NetWeaver | Graphic Presentation of Complex Genomic and Network Data Analysis |
| network | Classes for Relational Data |
| networkABC | Network Reverse Engineering with Approximate Bayesian Computation |
| NetworkChange | Bayesian Package for Network Changepoint Analysis |
| NetworkComparisonTest | Statistical Comparison of Two Networks Based on Several Invariance Measures |
| NetworkComparr | Statistical Comparison of Networks |
| networkD3 | D3 JavaScript Network Graphs from R |
| NetworkDistance | Distance Measures for Networks |
| networkDynamic | Dynamic Extensions for Network Objects |
| networkDynamicData | Dynamic (Longitudinal) Network Datasets |
| NetworkExtinction | Extinction Simulation in Ecological Networks |
| networkGen | Network Maze Generator |
| NetworkInference | Inferring Latent Diffusion Networks |
| networkLite | An Simplified Implementation of the 'network' Package Functionality |
| networkR | Network Analysis and Visualization |
| NetworkReg | Generalized Linear Regression Models on Network-Linked Data with Statistical Inference |
| NetworkRiskMeasures | Risk Measures for (Financial) Networks |
| networkscaleup | Network Scale-Up Models for Aggregated Relational Data |
| NetworkToolbox | Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis |
| networktools | Tools for Identifying Important Nodes in Networks |
| networktree | Recursive Partitioning of Network Models |
| NeuralEstimators | Likelihood-Free Parameter Estimation using Neural Networks |
| neuralGAM | Interpretable Neural Network Based on Generalized Additive Models |
| neuralnet | Training of Neural Networks |
| NeuralNetTools | Visualization and Analysis Tools for Neural Networks |
| NeuralSens | Sensitivity Analysis of Neural Networks |
| neurobase | 'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects |
| neuroblastoma | Neuroblastoma Copy Number Profiles |
| NeuroDecodeR | Decode Information from Neural Activity |
| neurohcp | Human 'Connectome' Project Interface |
| neuroim | Data Structures and Handling for Neuroimaging Data |
| neuroimaGene | Transcriptomic Atlas of Neuroimaging Derived Phenotypes |
| neuromplex | Neural Multiplexing Analysis |
| neuRosim | Simulate fMRI Data |
| neuroUp | Plan Sample Size for Task fMRI Research using Bayesian Updating |
| neutralitytestr | Test for a Neutral Evolutionary Model in Cancer Sequencing Data |
| neutrostat | Neutrosophic Statistics |
| nevada | Network-Valued Data Analysis |
| neverhpfilter | An Alternative to the Hodrick-Prescott Filter |
| new.dist | Alternative Continuous and Discrete Distributions |
| Newdistns | Computes Pdf, Cdf, Quantile and Random Numbers, Measures of Inference for 19 General Families of Distributions |
| newFocus | True Discovery Guarantee by Combining Partial Closed Testings |
| newIMVC | A Robust Integrated Mean Variance Correlation |
| NewmanOmics | Extending the Newman Studentized Range Statistic to Transcriptomics |
| newsanchor | Client for the News API |
| newscatcheR | Programmatically Collect Normalized News from (Almost) Any Website |
| newsmap | Semi-Supervised Model for Geographical Document Classification |
| newsmd | Creation of NEWS.md File |
| newTestSurvRec | Statistical Tests to Compare Curves with Recurrent Events |
| nextGenShinyApps | Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools |
| nexus | Sourcing Archaeological Materials by Chemical Composition |
| nFactors | Parallel Analysis and Other Non Graphical Solutions to the Cattell Scree Test |
| NFCP | N-Factor Commodity Pricing Through Term Structure Estimation |
| nfer | Event Stream Abstraction using Interval Logic |
| nfl4th | Functions to Calculate Optimal Fourth Down Decisions in the National Football League |
| nflfastR | Functions to Efficiently Access NFL Play by Play Data |
| nflplotR | NFL Logo Plots in 'ggplot2' and 'gt' |
| nflreadr | Download 'nflverse' Data |
| nflseedR | Functions to Efficiently Simulate and Evaluate NFL Seasons |
| NFLSimulatoR | Simulating Plays and Drives in the NFL |
| nflverse | Easily Install and Load the 'nflverse' |
| nftbart | Nonparametric Failure Time Bayesian Additive Regression Trees |
| nFunNN | Nonlinear Functional Principal Component Analysis using Neural Networks |
| NFWdist | The Standard Distribution Functions for the 3D NFW Profile |
| ngboostForecast | Probabilistic Time Series Forecasting |
| NGBVS | Bayesian Variable Selection for SNP Data using Normal-Gamma |
| NGCHM | Next Generation Clustered Heat Maps |
| NGLVieweR | Interactive 3D Visualization of Molecular Structures |
| ngram | Fast n-Gram 'Tokenization' |
| ngramr | Retrieve and Plot Google n-Gram Data |
| ngramrr | A Simple General Purpose N-Gram Tokenizer |
| ngspatial | Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data |
| NHANES | Data from the US National Health and Nutrition Examination Study |
| nhanesA | NHANES Data Retrieval |
| nhdplusTools | NHDPlus Tools |
| nhdR | Tools for Working with the National Hydrography Dataset |
| nhlapi | A Minimum-Dependency 'R' Interface to the 'NHL' API |
| NHLData | Scores for Every Season Since the Founding of the NHL in 1917 |
| nhm | Non-Homogeneous Markov and Hidden Markov Multistate Models |
| NHPoisson | Modelling and Validation of Non Homogeneous Poisson Processes |
| nhppp | Simulating Nonhomogeneous Poisson Point Processes |
| nhs.predict | Breast Cancer Survival and Therapy Benefits |
| NHSDataDictionaRy | NHS Data Dictionary Toolset for NHS Lookups |
| nhsnumber | Tools for Working with NHS Number Checksums |
| NHSRdatasets | NHS and Healthcare-Related Data for Education and Training |
| NHSRplotthedots | Draw XmR Charts for NHSE/I 'Making Data Count' Programme |
| nhstplot | Plot Null Hypothesis Significance Tests |
| niaidMI | Markov Model Multiple Imputation for NIAID OS |
| niarules | Numerical Association Rule Mining using Population-Based Nature-Inspired Algorithms |
| nic | Nature Inspired Colours |
| nice | Get or Set UNIX Niceness |
| NicheBarcoding | Niche-model-Based Species Identification |
| nicheROVER | Niche Region and Niche Overlap Metrics for Multidimensional Ecological Niches |
| nichetools | Complementary Package to 'nicheROVER' and 'SIBER' |
| nichevol | Tools for Ecological Niche Evolution Assessment Considering Uncertainty |
| nieve | Miscellaneous Utilities for Extreme Value Analysis |
| nifti.io | Read and Write NIfTI Files |
| nifti.pbcor | Parcel-Based Correlation Between NIfTI Images |
| NightDay | Night and Day Boundary Plot Function |
| nilde | Nonnegative Integer Solutions of Linear Diophantine Equations with Applications |
| NiLeDAM | Monazite Dating for the NiLeDAM Team |
| nima | Nima Hejazi's R Toolbox |
| NIMAA | Nominal Data Mining Analysis |
| nimble | MCMC, Particle Filtering, and Programmable Hierarchical Modeling |
| nimbleAPT | Adaptive Parallel Tempering for 'NIMBLE' |
| nimbleCarbon | Bayesian Analyses of Radiocarbon Dates with NIMBLE |
| nimbleEcology | Distributions for Ecological Models in 'nimble' |
| nimbleHMC | Hamiltonian Monte Carlo and Other Gradient-Based MCMC Sampling Algorithms for 'nimble' |
| nimbleNoBounds | Transformed Distributions for Improved MCMC Efficiency |
| nimbleSCR | Spatial Capture-Recapture (SCR) Methods Using 'nimble' |
| nimbleSMC | Sequential Monte Carlo Methods for 'nimble' |
| nipals | Principal Components Analysis using NIPALS or Weighted EMPCA, with Gram-Schmidt Orthogonalization |
| nipnTK | National Information Platforms for Nutrition Anthropometric Data Toolkit |
| NipponMap | Japanese Map Data and Functions |
| NIPTeR | Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal Testing |
| NIRStat | Novel Statistical Methods for Studying Near-Infrared Spectroscopy (NIRS) Time Series Data |
| NISTnls | Nonlinear least squares examples from NIST |
| NISTunits | Fundamental Physical Constants and Unit Conversions from NIST |
| NitrogenUptake2016 | Data and Source Code From: Nitrogen Uptake and Allocation Estimates for Spartina Alterniflora and Distichlis Spicata |
| nivm | Noninferiority Tests with Variable Margins |
| nixmass | Snow Water Equivalent Modeling with the 'Delta.snow' Model and Empirical Regression Models |
| nixtlar | A Software Development Kit for 'Nixtla”s 'TimeGPT' |
| njgeo | Tools for Geocoding Addresses in New Jersey using the 'NJOGIS' API |
| nJira | SQL Like Query Interface for 'Jira' |
| njtr1 | Download, Analyze & Clean New Jersey Car Crash Data |
| NlcOptim | Solve Nonlinear Optimization with Nonlinear Constraints |
| nlcv | Nested Loop Cross Validation |
| nleqslv | Solve Systems of Nonlinear Equations |
| nlgm | Non Linear Growth Models |
| NlinTS | Models for Non Linear Causality Detection in Time Series |
| nlist | Lists of Numeric Atomic Objects |
| nlive | Automated Estimation of Sigmoidal and Piecewise Linear Mixed Models |
| nlme | Linear and Nonlinear Mixed Effects Models |
| nlmeU | Datasets and Utility Functions Enhancing Functionality of 'nlme' Package |
| nlmeVPC | Visual Model Checking for Nonlinear Mixed Effect Model |
| nlmixr2 | Nonlinear Mixed Effects Models in Population PK/PD |
| nlmixr2data | Nonlinear Mixed Effects Models in Population PK/PD, Data |
| nlmixr2est | Nonlinear Mixed Effects Models in Population PK/PD, Estimation Routines |
| nlmixr2extra | Nonlinear Mixed Effects Models in Population PK/PD, Extra Support Functions |
| nlmixr2lib | A Model Library for 'nlmixr2' |
| nlmixr2plot | Nonlinear Mixed Effects Models in Population PK/PD, Plot Functions |
| nlmixr2rpt | Templated Word and PowerPoint Reporting of 'nlmixr2' Fitting Results |
| nlmm | Generalized Laplace Mixed-Effects Models |
| nlmrt | Functions for Nonlinear Least Squares Solutions |
| nlMS | Non-Linear Model Selection |
| nlnet | Nonlinear Network, Clustering, and Variable Selection Based on DCOL |
| nlopt | Call Optimization Solvers with .nl Files |
| nloptr | R Interface to NLopt |
| NLP | Natural Language Processing Infrastructure |
| NLPclient | Stanford 'CoreNLP' Annotation Client |
| nlpred | Estimators of Non-Linear Cross-Validated Risks Optimized for Small Samples |
| nlpsem | Linear and Nonlinear Longitudinal Process in Structural Equation Modeling Framework |
| NLPutils | Natural Language Processing Utilities |
| nlraa | Nonlinear Regression for Agricultural Applications |
| nlreg | Higher Order Inference for Nonlinear Heteroscedastic Models |
| NLRoot | searching for the root of equation |
| nlrr | Non-Linear Relative Risk Estimation and Plotting |
| nlrx | Setup, Run and Analyze 'NetLogo' Model Simulations from 'R' via 'XML' |
| nls.multstart | Robust Non-Linear Regression using AIC Scores |
| nls2 | Non-Linear Regression with Brute Force |
| nlsem | Fitting Structural Equation Mixture Models |
| nlshrink | Non-Linear Shrinkage Estimation of Population Eigenvalues and Covariance Matrices |
| nlsic | Non Linear Least Squares with Inequality Constraints |
| nlsMicrobio | Nonlinear Regression in Predictive Microbiology |
| nlsmsn | Fitting Nonlinear Models with Scale Mixture of Skew-Normal Distributions |
| nlsr | Functions for Nonlinear Least Squares Solutions - Updated 2022 |
| nlstac | An R Package for Fitting Separable Nonlinear Models |
| nlstools | Tools for Nonlinear Regression Analysis |
| NlsyLinks | Utilities and Kinship Information for Research with the NLSY |
| nlt | A Nondecimated Lifting Transform for Signal Denoising |
| nltm | Non-Linear Transformation Models |
| nlts | Nonlinear Time Series Analysis |
| nLTT | Calculate the NLTT Statistic |
| nlWaldTest | Wald Test of Nonlinear Restrictions and Nonlinear CI |
| NMA | Network Meta-Analysis Based on Multivariate Meta-Analysis Models |
| nmadb | Network Meta-Analysis Database API |
| NMADiagT | Network Meta-Analysis of Multiple Diagnostic Tests |
| nmaINLA | Network Meta-Analysis using Integrated Nested Laplace Approximations |
| NMAoutlier | Detecting Outliers in Network Meta-Analysis |
| nmaplateplot | The Plate Plot for Network Meta-Analysis Results |
| nmarank | Complex Hierarchy Questions in Network Meta-Analysis |
| nmathresh | Thresholds and Invariant Intervals for Network Meta-Analysis |
| NMcalc | Basic Calculations for PK/PD Modeling |
| NMdata | Preparation, Checking and Post-Processing Data for PK/PD Modeling |
| NMF | Algorithms and Framework for Nonnegative Matrix Factorization (NMF) |
| nmfbin | Non-Negative Matrix Factorization for Binary Data |
| NMFN | Non-Negative Matrix Factorization |
| NMI | Normalized Mutual Information of Community Structure in Network |
| Nmisc | Miscellaneous Functions Used at 'Numeract LLC' |
| Nmix | Bayesian Inference on Univariate Normal Mixtures |
| nmixgof | Goodness of Fit Checks for Binomial N-Mixture Models |
| NMMIPW | Inverse Probability Weighting under Non-Monotone Missing |
| NMOF | Numerical Methods and Optimization in Finance |
| NMRphasing | Phase Error Correction and Baseline Correction for One Dimensional ('1D') 'NMR' Data |
| nmrrr | Binning and Visualizing NMR Spectra in Environmental Samples |
| NMsim | Seamless 'Nonmem' Simulation Platform |
| nmslibR | Non Metric Space (Approximate) Library |
| NMTox | Dose-Response Relationship Analysis of Nanomaterial Toxicity |
| NMVANOVA | Novice Model Variation ANOVA |
| nmw | Understanding Nonlinear Mixed Effects Modeling for Population Pharmacokinetics |
| nn2poly | Neural Network Weights Transformation into Polynomial Coefficients |
| nna | Nearest-Neighbor Analysis |
| NNbenchmark | Datasets and Functions to Benchmark Neural Network Packages |
| nncc | Nearest Neighbors Matching of Case-Control Data |
| nndiagram | Generator of 'LaTeX' Code for Drawing Neural Network Diagrams with 'TikZ' |
| nnet | Feed-Forward Neural Networks and Multinomial Log-Linear Models |
| nnfor | Time Series Forecasting with Neural Networks |
| nnGarrote | Non-Negative Garrote Estimation with Penalized Initial Estimators |
| nngeo | k-Nearest Neighbor Join for Spatial Data |
| nnlasso | Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models |
| nnlib2Rcpp | A Tool for Creating Custom Neural Networks in C++ and using Them in R |
| nnls | The Lawson-Hanson Algorithm for Non-Negative Least Squares (NNLS) |
| NNMIS | Nearest Neighbor Based Multiple Imputation for Survival Data with Missing Covariates |
| nnR | Neural Networks Made Algebraic |
| NNS | Nonlinear Nonparametric Statistics |
| nnspat | Nearest Neighbor Methods for Spatial Patterns |
| nnt | The Number Needed to Treat (NNT) for Survival Endpoint |
| NNTbiomarker | Calculate Design Parameters for Biomarker Validation Studies |
| nnTensor | Non-Negative Tensor Decomposition |
| nntmvn | Draw Samples of Truncated Multivariate Normal Distributions |
| NO.PING.PONG | Incorporating Previous Findings When Evaluating New Data |
| noaastormevents | Explore NOAA Storm Events Database |
| noah | Create Unique Pseudonymous Animal Names |
| NobBS | Nowcasting by Bayesian Smoothing |
| noctua | Connect to 'AWS Athena' using R 'AWS SDK' 'paws' ('DBI' Interface) |
| nodbi | 'NoSQL' Database Connector |
| node2vec | Algorithmic Framework for Representational Learning on Graphs |
| nodeSub | Simulate DNA Alignments Using Node Substitutions |
| nodiv | Compares the Distribution of Sister Clades Through a Phylogeny |
| noegletalR | Tidy Tibbles of Noegletal |
| nofrills | Low-Cost Anonymous Functions |
| noia | Implementation of the Natural and Orthogonal InterAction (NOIA) Model |
| noise | Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data |
| noisemodel | Noise Models for Classification Datasets |
| noisyCE2 | Cross-Entropy Optimisation of Noisy Functions |
| noisyr | Noise Quantification in High Throughput Sequencing Output |
| noisySBM | Noisy Stochastic Block Mode: Graph Inference by Multiple Testing |
| noisysbmGGM | Noisy Stochastic Block Model for GGM Inference |
| nolock | Append 'WITH (NOLOCK)' to 'SQL' Queries, Get Packages in Active Script |
| nombre | Number Names |
| nomclust | Hierarchical Cluster Analysis of Nominal Data |
| nominatimlite | Interface with 'Nominatim' API Service |
| nomisr | Access 'Nomis' UK Labour Market Data |
| nomnoml | Sassy 'UML' Diagrams |
| nomogramEx | Extract Equations from a Nomogram |
| nomogramFormula | Calculate Total Points and Probabilities for Nomogram |
| NonCompart | Noncompartmental Analysis for Pharmacokinetic Data |
| noncompliance | Causal Inference in the Presence of Treatment Noncompliance Under the Binary Instrumental Variable Model |
| noncomplyR | Bayesian Analysis of Randomized Experiments with Non-Compliance |
| nonet | Weighted Average Ensemble without Training Labels |
| nonLinearDotPlot | Non Linear Dot Plots |
| nonlinearICP | Invariant Causal Prediction for Nonlinear Models |
| NonlinearTSA | Nonlinear Time Series Analysis |
| nonlinearTseries | Nonlinear Time Series Analysis |
| nonmem2R | Loading NONMEM Output Files with Functions for Visual Predictive Checks (VPC) and Goodness of Fit (GOF) Plots |
| nonmem2rx | 'nonmem2rx' Converts 'NONMEM' Models to 'rxode2' |
| nonmemica | Create and Evaluate NONMEM Models in a Project Context |
| nonneg.cg | Non-Negative Conjugate-Gradient Minimizer |
| nonnest2 | Tests of Non-Nested Models |
| NonNorMvtDist | Multivariate Lomax (Pareto Type II) and Its Related Distributions |
| nonpar | A Collection of Nonparametric Hypothesis Tests |
| nonparaeff | Nonparametric Methods for Measuring Efficiency and Productivity |
| nonparametric.bayes | Project Code - Nonparametric Bayes |
| Nonpareil | Metagenome Coverage Estimation and Projections for 'Nonpareil' |
| NonParRolCor | a Non-Parametric Statistical Significance Test for Rolling Window Correlation |
| NonProbEst | Estimation in Nonprobability Sampling |
| nonprobsvy | Inference Based on Non-Probability Samples |
| nonsmooth | Nonparametric Methods for Smoothing Nonsmooth Data |
| nopaco | Non-Parametric Concordance Coefficient |
| nopp | Nash Optimal Party Positions |
| nor1mix | Normal aka Gaussian 1-d Mixture Models |
| nord | Arctic Ice Studio's Nord and Group of Seven Inspired Colour Palettes for 'ggplot2' |
| nordklimdata1 | Dataset for Climate Analysis with Data from the Nordic Region |
| norm | Analysis of Multivariate Normal Datasets with Missing Values |
| NORMA | Builds General Noise SVRs |
| normaliseR | Re-Scale Vectors and Time-Series Features |
| NormalityAssessment | A Graphical User Interface for Testing Normality Visually |
| normalize | Centering and Scaling of Numeric Data |
| normalizeH | Normalize Hadamard Matrix |
| NormalLaplace | The Normal Laplace Distribution |
| normalp | Routines for Exponential Power Distribution |
| normalr | Normalisation of Multiple Variables in Large-Scale Datasets |
| NormData | Derivation of Regression-Based Normative Data |
| NormExpression | Normalize Gene Expression Data using Evaluated Methods |
| normfluodbf | Cleans and Normalizes FLUOstar DBF and DAT Files from 'Liposome' Flux Assays |
| norMmix | Direct MLE for Multivariate Normal Mixture Distributions |
| NormPsy | Normalisation of Psychometric Tests |
| nortest | Tests for Normality |
| nortestARMA | Neyman Smooth Tests of Normality for the Errors of ARMA Models |
| nortsTest | Assessing Normality of Stationary Process |
| nos | Compute Node Overlap and Segregation in Ecological Networks |
| nosoi | A Forward Agent-Based Transmission Chain Simulator |
| NostalgiR | Advanced Text-Based Plots |
| not | Narrowest-Over-Threshold Change-Point Detection |
| notebookutils | Dummy R APIs Used in 'Azure Synapse Analytics' for Local Developments |
| notifyme | Send Alerts to your Cellphone and Phillips Hue Lights |
| NovelDistns | Computes PDF, CDF, Quantile, Random Numbers and Measures of Inference for 3 General Families of Distributions |
| novelforestSG | Dataset from the Novel Forests of Singapore |
| novelqualcodes | Visualise the Path to a Stopping Point in Qualitative Interviews Based on Novel Codes |
| NoviceDeveloperResources | Resources to Assist Novice Developers |
| NoviceDeveloperResources2 | Further Resources to Assist Novice Developers |
| noweb | The 'noweb' System for R |
| Nozzle.R1 | Nozzle Reports |
| np | Nonparametric Kernel Smoothing Methods for Mixed Data Types |
| nparACT | Non-Parametric Measures of Actigraphy Data |
| nparcomp | Multiple Comparisons and Simultaneous Confidence Intervals |
| nparLD | Nonparametric Analysis of Longitudinal Data in Factorial Experiments |
| nparMD | Nonparametric Analysis of Multivariate Data in Factorial Designs |
| nparsurv | Nonparametric Tests for Main Effects, Simple Effects and Interaction Effect in a Factorial Design with Censored Data |
| NPBayesImputeCat | Non-Parametric Bayesian Multiple Imputation for Categorical Data |
| npboottprm | Nonparametric Bootstrap Test with Pooled Resampling |
| npboottprmFBar | Informative Nonparametric Bootstrap Test with Pooled Resampling |
| npbr | Nonparametric Boundary Regression |
| NPCD | Nonparametric Methods for Cognitive Diagnosis |
| NPCDTools | The Nonparametric Classification Methods for Cognitive Diagnosis |
| NPCirc | Nonparametric Circular Methods |
| npclust | Nonparametric Tests for Incomplete Clustered Data |
| NPCox | Nonparametric and Semiparametric Proportional Hazards Model |
| npcp | Some Nonparametric CUSUM Tests for Change-Point Detection in Possibly Multivariate Observations |
| npcs | Neyman-Pearson Classification via Cost-Sensitive Learning |
| npcure | Nonparametric Estimation in Mixture Cure Models |
| npcurePK | Mixture Cure Model Estimation with Cure Status Partially Known |
| npde | Normalised Prediction Distribution Errors for Nonlinear Mixed-Effect Models |
| npDoseResponse | Nonparametric Estimation and Inference on Dose-Response Curves |
| npExact | Exact Nonparametric Hypothesis Tests for the Mean, Variance and Stochastic Inequality |
| NPFD | N-Power Fourier Deconvolution |
| NPflow | Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data |
| nph | Planning and Analysing Survival Studies under Non-Proportional Hazards |
| NPHazardRate | Nonparametric Hazard Rate Estimation |
| NPHMC | Sample Size Calculation for the Proportional Hazards Mixture Cure Model |
| nphPower | Sample Size Calculation under Non-Proportional Hazards |
| nphRCT | Non-Proportional Hazards in Randomized Controlled Trials |
| npi | Access the U.S. National Provider Identifier Registry API |
| npIntFactRep | Nonparametric Interaction Tests for Factorial Designs with Repeated Measures |
| NPIstats | Nonparametric Predictive Inference |
| nplplot | Plotting Linkage and Association Results |
| nplr | N-Parameter Logistic Regression |
| nplyr | A Grammar of Nested Data Manipulation |
| npmlda | Nonparametric Models for Longitudinal Data |
| NPMLEcmprsk | Type-Specific Failure Rate and Hazard Rate on Competing Risks Data |
| npmlreg | Nonparametric Maximum Likelihood Estimation for Random Effect Models |
| npmr | Nuclear Penalized Multinomial Regression |
| npmv | Nonparametric Comparison of Multivariate Samples |
| npordtests | Nonparametric Tests for Equality of Location Against Ordered Alternatives |
| NPP | Normalized Power Prior Bayesian Analysis |
| nppbib | Nonparametric Partially-Balanced Incomplete Block Design Analysis |
| npphen | Vegetation Phenological Cycle and Anomaly Detection using Remote Sensing Data |
| NPRED | Predictor Identifier: Nonparametric Prediction |
| npreg | Nonparametric Regression via Smoothing Splines |
| npregderiv | Nonparametric Estimation of the Derivatives of a Regression Function |
| npregfast | Nonparametric Estimation of Regression Models with Factor-by-Curve Interactions |
| nprobust | Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation |
| nproc | Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves |
| npROCRegression | Kernel-Based Nonparametric ROC Regression Modelling |
| nprotreg | Nonparametric Rotations for Sphere-Sphere Regression |
| npsf | Nonparametric and Stochastic Efficiency and Productivity Analysis |
| npsm | Nonparametric Statistical Methods |
| npsp | Nonparametric Spatial Statistics |
| npsurv | Nonparametric Survival Analysis |
| npsurvSS | Sample Size and Power Calculation for Common Non-Parametric Tests in Survival Analysis |
| nptest | Nonparametric Bootstrap and Permutation Tests |
| npwbs | Nonparametric Multiple Change Point Detection Using WBS |
| nrba | Methods for Conducting Nonresponse Bias Analysis (NRBA) |
| nRegression | Simulation-Based Calculations of Sample Size for Linear and Logistic Regression |
| NRejections | Metrics for Multiple Testing with Correlated Outcomes |
| nricens | NRI for Risk Prediction Models with Time to Event and Binary Response Data |
| NSAE | Nonstationary Small Area Estimation |
| nsarfima | Methods for Fitting and Simulating Non-Stationary ARFIMA Models |
| nscancor | Non-Negative and Sparse CCA |
| NScluster | Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models |
| nse | Numerical Standard Errors Computation in R |
| nseq | Count of Sequential Events |
| nser | Bhavcopy and Live Market Data from National Stock Exchange (NSE) & Bombay Stock Exchange (BSE) India |
| nsga2R | Elitist Non-Dominated Sorting Genetic Algorithm |
| nsga3 | An Implementation of Non-Dominated Sorting Genetic Algorithm III for Feature Selection |
| NSM3 | Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition |
| nsm3data | Datasets to Accompany Hollander, Wolfe, and Chicken NSM3 |
| NSO1212 | National Statistical Office of Mongolia's Open Data API Handler |
| nsp | Inference for Multiple Change-Points in Linear Models |
| nspmix | Nonparametric and Semiparametric Mixture Estimation |
| nsprcomp | Non-Negative and Sparse PCA |
| NSR | 'Native Status Resolver' |
| nsRFA | Non-Supervised Regional Frequency Analysis |
| nsROC | Non-Standard ROC Curve Analysis |
| NST | Normalized Stochasticity Ratio |
| nswgeo | Geospatial Data and Maps for New South Wales, Australia |
| nsyllable | Count Syllables in Character Vectors |
| ntdr | Retrieve Data from the National Transit Database |
| ntfy | Lightweight Wrapper to the 'ntfy.sh' Service |
| NTLKwIEx | Computation of NTLKwIEx Distribution Properties |
| ntranova | Two Way Neutrosophic ANOVA |
| NTS | Nonlinear Time Series Analysis |
| ntsDatasets | Neutrosophic Data Sets |
| ntsDists | Neutrosophic Distributions |
| NTSS | Nonparametric Tests in Spatial Statistics |
| NU.Learning | Nonparametric and Unsupervised Learning from Cross-Sectional Observational Data |
| nucim | Nucleome Imaging Toolbox |
| NUCOMBog | NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate |
| NUETON | Nitrogen Use Efficiency Toolkit on Numerics |
| nuggets | Extensible Data Pattern Searching Framework |
| nullabor | Tools for Graphical Inference |
| numbat | Haplotype-Aware CNV Analysis from scRNA-Seq |
| numberize | Convert Words to Numbers in Multiple Languages |
| numberofalleles | Compute the Probability Distribution of the Number of Alleles in a DNA Mixture |
| numbers | Number-Theoretic Functions |
| numbersBR | Validate, Compare and Format Identification Numbers from Brazil |
| numDeriv | Accurate Numerical Derivatives |
| Numero | Statistical Framework to Define Subgroups in Complex Datasets |
| numform | Tools to Format Numbers for Publication |
| numGen | Number Series Generator |
| numKM | Create a Kaplan-Meier Plot with Numbers at Risk |
| numOSL | Numeric Routines for Optically Stimulated Luminescence Dating |
| NUSS | Mixed N-Grams and Unigram Sequence Segmentation |
| NutrienTrackeR | Food Composition Information and Dietary Assessment |
| nutriNetwork | Structure Learning with Copula Graphical Model |
| nutrition | Useful Functions for People on a Diet |
| nuts | Convert European Regional Data |
| NVAR | Nonlinear Vector Autoregression Models |
| NVCSSL | Nonparametric Varying Coefficient Spike-and-Slab Lasso |
| nvctr | The n-vector Approach to Geographical Position Calculations using an Ellipsoidal Model of Earth |
| nvmix | Multivariate Normal Variance Mixtures |
| nycflights13 | Flights that Departed NYC in 2013 |
| nycflights23 | Flights and Other Useful Metadata for NYC Outbound Flights in 2023 |
| nzelect | New Zealand Election Data |
| nzffdr | Import, Clean and Update Data from the New Zealand Freshwater Fish Database |
| nzilbb.labbcat | Accessing Data Stored in 'LaBB-CAT' Instances |
| nzpullover | Driving Offences in New Zealand Between 2009 and 2016 |
| o2geosocial | Reconstruction of Transmission Chains from Surveillance Data |
| o2plsda | Multiomics Data Integration |
| oaColors | OpenAnalytics Colors Package |
| oai | General Purpose 'Oai-PMH' Services Client |
| OAIHarvester | Harvest Metadata Using OAI-PMH Version 2.0 |
| oaii | 'OpenAI' API R Interface |
| oaPlots | OpenAnalytics Plots Package |
| oaqc | Computation of the Orbit-Aware Quad Census |
| Oarray | Arrays with Arbitrary Offsets |
| OasisR | Outright Tool for the Analysis of Spatial Inequalities and Segregation |
| oaxaca | Blinder-Oaxaca Decomposition |
| obAnalytics | Limit Order Book Analytics |
| OBASpatial | Objective Bayesian Analysis for Spatial Regression Models |
| obcost | Obesity Cost Database |
| obfuscatoR | Obfuscation Game Designs |
| OBIC | Calculate the Open Bodem Index (OBI) Score |
| objectProperties | A Factory of Self-Describing Properties |
| objectremover | 'RStudio' Addin for Removing Objects from the Global Environment Based on Patterns and Object Type |
| objectSignals | Observer Pattern for S4 |
| OBL | Optimum Block Length |
| oblicubes | 3D Rendering Using Obliquely Projected Cubes and Cuboids |
| obliqueRSF | Oblique Random Forests for Right-Censored Time-to-Event Data |
| OBMbpkg | Estimate the Population Size for the Mb Capture-Recapture Model |
| OBRE | Optimal B-Robust Estimator Tools |
| Observation | Collect and Process Physical Activity Direct Observation Data |
| OBsMD | Objective Bayesian Model Discrimination in Follow-Up Designs |
| obsSens | Sensitivity Analysis for Observational Studies |
| oc | Optimal Classification Roll Call Analysis Software |
| OCA | Optimal Capital Allocations |
| occ | Estimation of PET Neuroreceptor Occupancies |
| occCite | Querying and Managing Large Biodiversity Occurrence Datasets |
| occumb | Site Occupancy Modeling for Environmental DNA Metabarcoding |
| occupancy | Probability Functions for Occupancy Distributions |
| occupationMeasurement | Interactively Measure Occupations in Interviews and Beyond |
| ocd | High-Dimensional Multiscale Online Changepoint Detection |
| oce | Analysis of Oceanographic Data |
| oceanexplorer | Explore Our Planet's Oceans with NOAA |
| oceanic | Location Identify Tool |
| oceanis | Cartography for Statistical Analysis |
| oceanmap | A Plotting Toolbox for 2D Oceanographic Data |
| OceanView | Visualisation of Oceanographic Data and Model Output |
| oceanwaves | Ocean Wave Statistics |
| oceCens | Ordered Composite Endpoints with Censoring |
| ocedata | Oceanographic Data Sets for 'oce' Package |
| ocf | Ordered Correlation Forest |
| ockc | Order Constrained Solutions in k-Means Clustering |
| oclust | Gaussian Model-Based Clustering with Outliers |
| OCNet | Optimal Channel Networks |
| ocp | Bayesian Online Changepoint Detection |
| ocs4R | Interface to Open Collaboration Services (OCS) REST API |
| OCSdata | Download Data from the 'Open Case Studies' Repository |
| octopucs | Statistical Support for Hierarchical Clusters |
| octopus | A Database Management Tool |
| octopusR | Interact with the 'Octopus Energy' API |
| od | Manipulate and Map Origin-Destination Data |
| ODataQuery | Querying on 'OData' |
| ODB | Open Document Databases (.odb) Management |
| odbc | Connect to ODBC Compatible Databases (using the DBI Interface) |
| oddnet | Anomaly Detection in Temporal Networks |
| odds.converter | Betting Odds Conversion |
| odds.n.ends | Odds Ratios, Contingency Table, and Model Significance from a Generalized Linear Model Object |
| oddsapiR | Access Live Sports Odds from the Odds API |
| OddsPlotty | Odds Plot to Visualise a Logistic Regression Model |
| oddsratio | Odds Ratio Calculation for GAM(M)s & GLM(M)s |
| oddstream | Outlier Detection in Data Streams |
| odeGUTS | Solve ODE for GUTS-RED-SD and GUTS-RED-IT Using Compiled Code |
| ODEnetwork | Network of Differential Equations |
| ODEsensitivity | Sensitivity Analysis of Ordinary Differential Equations |
| odetector | Outlier Detection Using Partitioning Clustering Algorithms |
| odin | ODE Generation and Integration |
| odk | Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame |
| ODMeans | OD-Means: k-Means for Origin-Destination |
| odr | Optimal Design and Statistical Power for Experimental Studies Investigating Main, Mediation, and Moderation Effects |
| ODRF | Oblique Decision Random Forest for Classification and Regression |
| ODS | Statistical Methods for Outcome-Dependent Sampling Designs |
| ODT | Optimal Decision Trees Algorithm |
| OECD | Search and Extract Data from the OECD |
| OEFPIL | Optimal Estimation of Function Parameters by Iterated Linearization |
| oeli | Utilities for Developing Data Science Software |
| oem | Orthogonalizing EM: Penalized Regression for Big Tall Data |
| oenb | Tools for the OeNB Data Web Service |
| OenoKPM | Modeling the Kinetics of Carbon Dioxide Production in Alcoholic Fermentation |
| oesr | Methods for the Office of Evaluation Sciences |
| oews2020 | May 2020 Occupational Employment and Wage Statistics |
| oews2021 | May 2021 Occupational Employment and Wage Statistics |
| officedown | Enhanced 'R Markdown' Format for 'Word' and 'PowerPoint' |
| officer | Manipulation of Microsoft Word and PowerPoint Documents |
| offlineChange | Detect Multiple Change Points from Time Series |
| offsetreg | An Extension of 'Tidymodels' Supporting Offset Terms |
| ofGEM | A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data |
| ofpetrial | Design on-Farm Precision Field Agronomic Trials |
| OGI | Objective General Index |
| oglmx | Estimation of Ordered Generalized Linear Models |
| ogrdbstats | Analysis of Adaptive Immune Receptor Repertoire Germ Line Statistics |
| OHCSpackage | Prepare Housing Data for Analysis |
| ohenery | Modeling of Ordinal Random Variables via Softmax Regression |
| Ohit | OGA+HDIC+Trim and High-Dimensional Linear Regression Models |
| oHMMed | HMMs with Ordered Hidden States and Emission Densities |
| ohoegdm | Ordinal Higher-Order Exploratory General Diagnostic Model for Polytomous Data |
| OHPL | Ordered Homogeneity Pursuit Lasso for Group Variable Selection |
| ohsome | An 'ohsome API' Client |
| ohtadstats | Tomoka Ohta D Statistics |
| ohun | Optimizing Acoustic Signal Detection |
| oii | Crosstab and Statistical Tests for OII MSc Stats Course |
| ojsr | Crawler and Data Scraper for Open Journal System ('OJS') |
| OkNNE | A k-Nearest Neighbours Ensemble via Optimal Model Selection for Regression |
| okxAPI | An Unofficial Wrapper for 'okx exchange v5' API |
| OLCPM | Online Change Point Detection for Matrix-Valued Time Series |
| olctools | Open Location Code Handling in R |
| OlinkAnalyze | Facilitate Analysis of Proteomic Data from Olink |
| ollamar | 'Ollama' Language Models |
| ollg | Computes some Measures of OLL-G Family of Distributions |
| ollggamma | Odd Log-Logistic Generalized Gamma Probability Distribution |
| olr | Optimal Linear Regression |
| olsrr | Tools for Building OLS Regression Models |
| OLStrajr | Ordinary Least Squares Trajectory Analysis |
| OlympicRshiny | 'Shiny' Application for Olympic Data |
| OmegaG | Omega-Generic: Composite Reliability of Multidimensional Measures |
| OmicKriging | Poly-Omic Prediction of Complex TRaits |
| OmicNavigator | Open-Source Software for 'Omic' Data Analysis and Visualization |
| omics | '–omics' Data Analysis Toolbox |
| OmicSense | Biosensor Development using Omics Data |
| OmicsPLS | Data Integration with Two-Way Orthogonal Partial Least Squares |
| OmicsQC | Nominating Quality Control Outliers in Genomic Profiling Studies |
| omicsTools | Omics Data Process Toolbox |
| omicwas | Cell-Type-Specific Association Testing in Bulk Omics Experiments |
| Omisc | Univariate Bootstrapping and Other Things |
| omnibus | Helper Tools for Managing Data, Dates, Missing Values, and Text |
| OmnibusFisher | A Modified Fisher’s Method to Test Overall Gene-Level Effect |
| omock | Creation of Mock Observational Medical Outcomes Partnership Common Data Model |
| omopgenerics | Methods and Classes for the OMOP Common Data Model |
| OmopSketch | Characterise Tables of an OMOP Common Data Model Instance |
| ompr | Model and Solve Mixed Integer Linear Programs |
| ompr.roi | A Solver for 'ompr' that Uses the R Optimization Infrastructure ('ROI') |
| omsvg | Build and Transform 'SVG' Objects |
| omu | A Metabolomics Analysis Tool for Intuitive Figures and Convenient Metadata Collection |
| onadata | Data Sets for Keith McNulty's Handbook of Graphs and Networks in People Analytics |
| OnAge | Test of Between-Group Differences in the Onset of Senescence |
| onbabynames | Names Given to Babies in Ontario Between 1917 and 2018 |
| OnboardClient | Bindings for Onboard Data's Building Data API |
| onbrand | Templated Reporting Workflows in Word and PowerPoint |
| onc.api | Oceans 2.0 API Client Library |
| once | Execute Expensive Operations Only Once |
| OncoBayes2 | Bayesian Logistic Regression for Oncology Dose-Escalation Trials |
| Oncofilterfast | Aids in the Analysis of Genes Influencing Cancer Survival |
| oncomsm | Bayesian Multi-State Models for Early Oncology |
| oncoPredict | Drug Response Modeling and Biomarker Discovery |
| OncoSubtype | Predict Cancer Subtypes Based on TCGA Data using Machine Learning Method |
| Oncotree | Estimating Oncogenetic Trees |
| oncrawlR | Machine Learning for S.E.O |
| ondisc | Fast, Universal, and Intuitive Computing on Large-Scale Single-Cell Data |
| One4All | Validate, Share, and Download Data |
| OneArm2stage | Phase II Single-Arm Two-Stage Designs with Time-to-Event Outcomes |
| OneArmTTE | One-Arm Clinical Trial Designs for Time-to-Event Endpoint |
| oneclust | Maximum Homogeneity Clustering for Univariate Data |
| onehot | Fast Onehot Encoding for Data.frames |
| onelogin | Interact with the 'OneLogin' API |
| onemap | Construction of Genetic Maps in Experimental Crosses |
| OneR | One Rule Machine Learning Classification Algorithm with Enhancements |
| OneSampleLogRankTest | One-Sample Log-Rank Test |
| OneSampleMR | One Sample Mendelian Randomization and Instrumental Variable Analyses |
| ONEST | Observers Needed to Evaluate Subjective Tests |
| OneStep | One-Step Estimation |
| onetime | Run Code Only Once |
| OneTwoSamples | Deal with One and Two (Normal) Samples |
| onewaytests | One-Way Tests in Independent Groups Designs |
| onion | Octonions and Quaternions |
| onlineBcp | Online Bayesian Methods for Change Point Analysis |
| onlineCOV | Online Change Point Detection in High-Dimensional Covariance Structure |
| onlineforecast | Forecast Modelling for Online Applications |
| onlinePCA | Online Principal Component Analysis |
| onlineretail | Online Retail Dataset |
| onls | Orthogonal Nonlinear Least-Squares Regression |
| onmaRg | Import Public Health Ontario's Ontario Marginalization Index |
| onnx | R Interface to 'ONNX' |
| OnomasticDiversity | Onomastic Diversity Measures |
| onpoint | Helper Functions for Point Pattern Analysis |
| onsr | Client for the 'ONS' API |
| onsvplot | National Road Safety Observatory (ONSV) Style for 'ggplot2' Graphics |
| onsvtables | National Road Safety Observatory (ONSV) Styles for 'gt' Tables |
| ontoFAST | Interactive Annotation of Characters with Biological Ontologies |
| ontologics | Code-Logics to Handle Ontologies |
| ontologyIndex | Reading Ontologies into R |
| ontologyPlot | Visualising Sets of Ontological Terms |
| ontologySimilarity | Calculating Ontological Similarities |
| ontophylo | Ontology-Informed Phylogenetic Comparative Analyses |
| OOBCurve | Out of Bag Learning Curve |
| oolong | Create Validation Tests for Automated Content Analysis |
| oompaBase | Class Unions, Matrix Operations, and Color Schemes for OOMPA |
| oompaData | Data to Illustrate OOMPA Algorithms |
| ooplah | Helper Functions for Class Object-Oriented Programming |
| OOR | Optimistic Optimization in R |
| OOS | Out-of-Sample Time Series Forecasting |
| oosse | Out-of-Sample R² with Standard Error Estimation |
| oottest | Out-of-Treatment Testing |
| opa | An Implementation of Ordinal Pattern Analysis |
| opalr | 'Opal' Data Repository Client and 'DataSHIELD' Utils |
| OPC | The Online Principal Component Estimation Method |
| opdisDownsampling | Optimal Distribution Preserving Down-Sampling of Bio-Medical Data |
| OPDOE | Optimal Design of Experiments |
| openai | R Wrapper for OpenAI API |
| openair | Tools for the Analysis of Air Pollution Data |
| openairmaps | Create Maps of Air Pollution Data |
| openaistream | Streaming Capabilities for 'OpenAI API' Interactions |
| openalexR | Getting Bibliographic Records from 'OpenAlex' Database Using 'DSL' API |
| openappr | Retrieve App Data from 'OpenAppBuilder' |
| openbankeR | R Client for Querying the UK 'Open Banking' ('Open Data') API |
| openblender | Request <https://openblender.io> API Services |
| opencage | Geocode with the OpenCage API |
| OpenCL | Interface allowing R to use OpenCL |
| opencpu | Producing and Reproducing Results |
| openCR | Open Population Capture-Recapture |
| opencv | Bindings to 'OpenCV' Computer Vision Library |
| opendataformat | Reading and Writing Open Data Format Files |
| opendatatoronto | Access the City of Toronto Open Data Portal |
| opendotaR | Interface for OpenDota API |
| openEBGM | EBGM Disproportionality Scores for Adverse Event Data Mining |
| openeo | Client Interface for 'openEO' Servers |
| openFDA | 'openFDA' API |
| OpEnHiMR | Optimization Based Ensemble Model for Prediction of Histone Modifications in Rice |
| OpenImageR | An Image Processing Toolkit |
| openintro | Datasets and Supplemental Functions from 'OpenIntro' Textbooks and Labs |
| OpenLand | Quantitative Analysis and Visualization of LUCC |
| openmeteo | Retrieve Weather Data from the Open-Meteo API |
| openmetrics | A 'Prometheus' Client for R Using the 'OpenMetrics' Format |
| OpenMindat | Quickly Retrieve Datasets from the 'mindat.org' API |
| OpenML | Open Machine Learning and Open Data Platform |
| openMSE | Easily Install and Load the 'openMSE' Packages |
| OpenMx | Extended Structural Equation Modelling |
| openNLP | Apache OpenNLP Tools Interface |
| openNLPdata | Apache OpenNLP Jars and Basic English Language Models |
| OpeNoise | Environmental Noise Pollution Data Analysis |
| OpenRepGrid | Tools to Analyze Repertory Grid Data |
| OpenRepGrid.ic | Interpretive Clustering for Repertory Grids |
| openrouteservice | An 'openrouteservice' API Client |
| openscoring | 'Open Scoring' API Client |
| openSkies | Retrieval, Analysis and Visualization of Air Traffic Data |
| OpenSpecy | Analyze, Process, Identify, and Share Raman and (FT)IR Spectra |
| openssl | Toolkit for Encryption, Signatures and Certificates Based on OpenSSL |
| OpenStreetMap | Access to Open Street Map Raster Images |
| opentripplanner | Setup and connect to 'OpenTripPlanner' |
| openVA | Automated Method for Verbal Autopsy |
| openxlsx | Read, Write and Edit xlsx Files |
| openxlsx2 | Read, Write and Edit 'xlsx' Files |
| opera | Online Prediction by Expert Aggregation |
| operator.tools | Utilities for Working with R's Operators |
| operators | Additional Binary Operators |
| opGMMassessment | Optimized Automated Gaussian Mixture Assessment |
| OPI | Open Perimetry Interface |
| opinAr | Argentina's Public Opinion Toolbox |
| opitools | Analyzing the Opinions in a Big Text Document |
| Opportunistic | Routing Distribution, Broadcasts, Transmissions and Receptions in an Opportunistic Network |
| oppr | Optimal Project Prioritization |
| OPSR | Ordinal Probit Switching Regression |
| Opt5PL | Optimal Designs for the 5-Parameter Logistic Model |
| optband | 'surv' Object Confidence Bands Optimized by Area |
| optbdmaeAT | Optimal Block Designs for Two-Colour cDNA Microarray Experiments |
| optbin | Optimal Binning of Data |
| optBiomarker | Estimation of Optimal Number of Biomarkers for Two-Group Microarray Based Classifications at a Given Error Tolerance Level for Various Classification Rules |
| OptCirClust | Circular, Periodic, or Framed Data Clustering: Fast, Optimal, and Reproducible |
| optDesignSlopeInt | Optimal Designs for Estimating the Slope Divided by the Intercept |
| OPTeCD | Optimal Partial Tetra-Allele Cross Designs |
| optedr | Calculating Optimal and D-Augmented Designs |
| optextras | Tools to Support Optimization Possibly with Bounds and Masks |
| OptGS | Near-Optimal Group-Sequential Designs for Continuous Outcomes |
| OptHedging | Estimation of value and hedging strategy of call and put options |
| OptHoldoutSize | Estimation of Optimal Size for a Holdout Set for Updating a Predictive Score |
| optic | Simulation Tool for Causal Inference Using Longitudinal Data |
| optical | Optimal Item Calibration |
| opticskxi | OPTICS K-Xi Density-Based Clustering |
| opticut | Likelihood Based Optimal Partitioning and Indicator Species Analysis |
| optifunset | Set Options if Unset |
| optigrab | Command-Line Parsing for an R World |
| optim.functions | Standard Benchmark Optimization Functions |
| OptimalCutpoints | Computing Optimal Cutpoints in Diagnostic Tests |
| OptimalDesign | A Toolbox for Computing Efficient Designs of Experiments |
| OptimalGoldstandardDesigns | Design Parameter Optimization for Gold-Standard Non-Inferiority Trials |
| optimall | Allocate Samples Among Strata |
| OptimalRerandExpDesigns | Optimal Rerandomization Experimental Designs |
| OptimalSurrogate | Model Free Approach to Quantifying Surrogacy |
| optimalThreshold | Bayesian Methods for Optimal Threshold Estimation |
| OptimalTiming | Optimal Timing Identification |
| OptimaRegion | Confidence Regions for Optima of Response Surfaces |
| optimbase | R Port of the 'Scilab' Optimbase Module |
| optimCheck | Graphical and Numerical Checks for Mode-Finding Routines |
| optimg | General-Purpose Gradient-Based Optimization |
| optimization | Flexible Optimization of Complex Loss Functions with State and Parameter Space Constraints |
| optimizeR | Unified Framework for Numerical Optimizers |
| optimLanduse | Robust Land-Use Optimization |
| OptimModel | Perform Nonlinear Regression Using 'optim' as the Optimization Engine |
| optimos.prime | Optimos Prime Helps Calculate Autoecological Data for Biological Species |
| optimParallel | Parallel Version of the L-BFGS-B Optimization Method |
| optimsimplex | R Port of the 'Scilab' Optimsimplex Module |
| optimStrat | Choosing the Sample Strategy |
| optimus | Model Based Diagnostics for Multivariate Cluster Analysis |
| optimx | Expanded Replacement and Extension of the 'optim' Function |
| optional | Optional Types and Pattern Matching |
| OptionPricing | Option Pricing with Efficient Simulation Algorithms |
| options | Simple, Consistent Package Options |
| optionstrat | Utilizes the Black-Scholes Option Pricing Model to Perform Strategic Option Analysis and Plot Option Strategies |
| optiscale | Optimal Scaling |
| optiSel | Optimum Contribution Selection and Population Genetics |
| optiSolve | Linear, Quadratic, and Rational Optimization |
| optistock | Determine Optimum Stocking Times Used in Fishery Enhancements |
| OptM | Estimating the Optimal Number of Migration Edges from 'Treemix' |
| optmatch | Functions for Optimal Matching |
| optparse | Command Line Option Parser |
| optpart | Optimal Partitioning of Similarity Relations |
| optR | Optimization Toolbox for Solving Linear Systems |
| optrcdmaeAT | Optimal Row-Column Designs for Two-Colour cDNA Microarray Experiments |
| optrefine | Optimally Refine Strata |
| optRF | Optimising Random Forest Stability Through Selection of the Optimal Number of Trees |
| OPTS | Optimization via Subsampling (OPTS) |
| OptSig | Optimal Level of Significance for Regression and Other Statistical Tests |
| OPTtesting | Optimal Testing |
| optweight | Targeted Stable Balancing Weights Using Optimization |
| opusminer | OPUS Miner Algorithm for Filtered Top-k Association Discovery |
| OralOpioids | Retrieving Oral Opioid Information |
| orbital | Predict with 'tidymodels' Workflows in Databases |
| orca | Computation of Graphlet Orbit Counts in Sparse Graphs |
| orclus | Subspace Clustering Based on Arbitrarily Oriented Projected Cluster Generation |
| ORCME | Order Restricted Clustering for Microarray Experiments |
| Orcs | Omnidirectional R Code Snippets |
| ordbetareg | Ordered Beta Regression Models with 'brms' |
| OrdCD | Ordinal Causal Discovery |
| ordcrm | Likelihood-Based Continual Reassessment Method (CRM) Dose Finding Designs |
| ordDisp | Separating Location and Dispersion in Ordinal Regression Models |
| ordering | Test, Check, Verify, Investigate the Monotonic Properties of Vectors |
| orderly | Lightweight Reproducible Reporting |
| orders | Sampling from k-th Order Statistics of New Families of Distributions |
| orderstats | Efficiently Generates Random Order Statistic Variables |
| OrdFacReg | Least Squares, Logistic, and Cox-Regression with Ordered Predictors |
| ordgam | Additive Model for Ordinal Data using Laplace P-Splines |
| ordiBreadth | Ordinated Diet Breadth |
| ordinal | Regression Models for Ordinal Data |
| ordinalbayes | Bayesian Ordinal Regression for High-Dimensional Data |
| ordinalCont | Ordinal Regression Analysis for Continuous Scales |
| ordinalForest | Ordinal Forests: Prediction and Variable Ranking with Ordinal Target Variables |
| ordinalgmifs | Ordinal Regression for High-Dimensional Data |
| ordinalLBM | Co-Clustering of Ordinal Data via Latent Continuous Random Variables |
| ordinalNet | Penalized Ordinal Regression |
| ordinalpattern | Tests Based on Ordinal Patterns |
| ordinalRR | Analysis of Repeatability and Reproducibility Studies with Ordinal Measurements |
| OrdMonReg | Compute least squares estimates of one bounded or two ordered isotonic regression curves |
| OrdNor | Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions |
| ordPens | Selection, Fusion, Smoothing and Principal Components Analysis for Ordinal Variables |
| ordr | A 'tidyverse' Extension for Ordinations and Biplots |
| ore | An R Interface to the Onigmo Regular Expression Library |
| oreo | Large Amplitude Oscillatory Shear (LAOS) |
| orf | Ordered Random Forests |
| ORFID | Manage and Summarize Data from Oregon RFID ORMR and ORSR Antenna Readers |
| org | Organising Projects |
| organizr | Shortcuts for File Creation with Informative Prefixes |
| OrgMassSpecR | Organic Mass Spectrometry |
| orgR | Analyse Text Files Created by Emacs' Org mode |
| orgutils | Helper Functions for Org Files |
| ORIClust | Order-Restricted Information Criterion-Based Clustering Algorithm |
| orientlib | Support for Orientation Data |
| origami | Generalized Framework for Cross-Validation |
| OrigamiPlot | A Visualization Tool Enhancing Radar Plot Visualizations for Multivariate Data |
| origin | Explicitly Qualifying Namespaces by Automatically Adding 'pkg::' to Functions |
| ORION | Ordinal Relations |
| ORIONZ.G | EAP Scoring in Exploratory FA Solutions with Correlated Residuals |
| ORKM | The Online Regularized K-Means Clustering Algorithm |
| orloca | Operations Research LOCational Analysis Models |
| orloca.es | Spanish version of orloca package. Modelos de localizacion en investigacion operativa |
| ormBigData | Fitting Semiparametric Cumulative Probability Models for Big Data |
| ormPlot | Advanced Plotting of Ordinal Regression Models |
| oro.dicom | Rigorous - DICOM Input / Output |
| oro.nifti | Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / Output |
| oro.pet | Rigorous - Positron Emission Tomography |
| orsifronts | Southern Ocean Frontal Distributions (Orsi) |
| orsk | Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information |
| ORTH.Ord | Alternating Logistic Regression with Orthogonalized Residuals for Correlated Ordinal Outcomes |
| orthGS | Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants |
| orthoDr | Semi-Parametric Dimension Reduction Models Using Orthogonality Constrained Optimization |
| orthogonalsplinebasis | Orthogonal B-Spline Basis Functions |
| OrthoPanels | Dynamic Panel Models with Orthogonal Reparameterization of Fixed Effects |
| orthopolynom | Collection of Functions for Orthogonal and Orthonormal Polynomials |
| ORTSC | Connects to Google Cloud API for Label Detection |
| oRus | Operational Research User Stories |
| OryzaProbe | Rice Microarray Probe ID Conversion, from Probe ID to RAP-DB ID |
| osc | Orthodromic Spatial Clustering |
| oscar | Optimal Subset Cardinality Regression (OSCAR) Models Using the L0-Pseudonorm |
| OscillatorGenerator | Generation of Customizable, Discretized Time Series of Oscillating Species |
| OSCV | One-Sided Cross-Validation |
| osd | Orthogonal Signal Deconvolution for Spectra Deconvolution in GC-MS and GCxGC-MS Data |
| osdatahub | Easier Interaction with the Ordnance Survey Data Hub |
| osDesign | Design, Planning and Analysis of Observational Studies |
| OSDR | Finds an Optimal System of Distinct Representatives |
| OSFD | Output Space-Filling Design |
| osfr | Interface to the 'Open Science Framework' ('OSF') |
| oshka | Recursive Quoted Language Expansion |
| oskeyring | Raw System Credential Store Access from R |
| OSLdecomposition | Signal Component Analysis for Optically Stimulated Luminescence |
| osmapiR | 'OpenStreetMap' API |
| osmclass | Classify Open Street Map Features |
| osmdata | Import 'OpenStreetMap' Data as Simple Features or Spatial Objects |
| osmextract | Download and Import Open Street Map Data Extracts |
| OSMscale | Add a Scale Bar to 'OpenStreetMap' Plots |
| OSNMTF | Orthogonal Sparse Non-Negative Matrix Tri-Factorization |
| osqp | Quadratic Programming Solver using the 'OSQP' Library |
| osrm | Interface Between R and the OpenStreetMap-Based Routing Service OSRM |
| osrmr | Wrapper for the 'OSRM' API |
| OssaNMA | Optimal Sample Size and Allocation with a Network Meta-Analysis |
| OSsurvival | Assessing Surrogacy with a Censored Outcome |
| Ostats | O-Stats, or Pairwise Community-Level Niche Overlap Statistics |
| OSTE | Optimal Survival Trees Ensemble |
| osum | Provide Summary Information About R Objects |
| otargen | Access Open Target Genetics |
| OTclust | Mean Partition, Uncertainty Assessment, Cluster Validation and Visualization Selection for Cluster Analysis |
| OTE | Optimal Trees Ensembles for Regression, Classification and Class Membership Probability Estimation |
| otinference | Inference for Optimal Transport |
| otp | One Time Password Generation and Verification |
| otpr | An R Wrapper for the 'OpenTripPlanner' REST API |
| OTrecod | Data Fusion using Optimal Transportation Theory |
| otrimle | Robust Model-Based Clustering |
| otrKM | Optimal Treatment Regimes in Survival Contexts with Kaplan-Meier-Like Estimators |
| OTRselect | Variable Selection for Optimal Treatment Decision |
| otsfeatures | Ordinal Time Series Analysis |
| ottr | An R Autograding Extension for Otter-Grader |
| ottrpal | Companion Tools for Open-Source Tools for Training Resources (OTTR) |
| otuSummary | Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres |
| OTUtable | North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions |
| ouch | Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses |
| ouladFormat | Loads and Formats the Open University Learning Analytics Dataset for Data Analysis |
| outbreaker2 | Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data |
| outbreaks | A Collection of Disease Outbreak Data |
| outcomerate | AAPOR Survey Outcome Rates |
| outForest | Multivariate Outlier Detection and Replacement |
| outlierensembles | A Collection of Outlier Ensemble Algorithms |
| outliers | Tests for Outliers |
| outliers.ts.oga | Efficient Outlier Detection in Heterogeneous Time Series Databases |
| OutliersLearn | Educational Outlier Package with Common Outlier Detection Algorithms |
| OutliersO3 | Draws Overview of Outliers (O3) Plots |
| outliertree | Explainable Outlier Detection Through Decision Tree Conditioning |
| outqrf | Find the Outlier by Quantile Random Forests |
| outreg | Regression Table for Publication |
| OutSeekR | Statistical Approach to Outlier Detection in RNA-Seq and Related Data |
| OUwie | Analysis of Evolutionary Rates in an OU Framework |
| overdisp | Overdispersion in Count Data Multiple Regression Analysis |
| overlap | Estimates of Coefficient of Overlapping for Animal Activity Patterns |
| overlapping | Estimation of Overlapping in Empirical Distributions |
| overlapptest | Test Overlapping of Polygons Against Random Rotation |
| overture | Tools for Writing MCMC |
| overturemapsr | Download Overture Maps Data in R |
| overtureR | Load 'Overture' Datasets as 'dbplyr' and 'sf'-Ready Data Frames |
| overviewR | Easily Extracting Information About Your Data |
| OVL.CI | Inference on the Overlap Coefficient: The Binormal Approach and Alternatives |
| OVtool | Omitted Variable Tool |
| owd | Open Working Directory |
| owdbr | Open Welfare Data Brazil |
| OWEA | Optimal Weight Exchange Algorithm for Optimal Designs for Three Models |
| OwenQ | Owen Q-Function |
| owidR | Import Data from Our World in Data |
| owmr | OpenWeatherMap API Wrapper |
| ows4R | Interface to OGC Web-Services (OWS) |
| ox | Shorthand if-Else |
| oxcAAR | Interface to 'OxCal' Radiocarbon Calibration |
| OxyBS | Processing of Oxy-Bisulfite Microarray Data |
| oysteR | Scans R Projects for Vulnerable Third Party Dependencies |
| oz | Plot the Australian Coastline and States |
| ozbabynames | Australian Popular Baby Names |
| ozmaps | Australia Maps |
| p3state.msm | Analyzing Survival Data from an Illness-Death Model |
| pa | Performance Attribution for Equity Portfolios |
| paar | Precision Agriculture Data Analysis |
| PAC | Partition-Assisted Clustering and Multiple Alignments of Networks |
| pack | Convert values to/from raw vectors |
| packageDiff | Compare R Package Differences |
| packagefinder | Comfortable Search for R Packages on CRAN, Either Directly from the R Console or with an R Studio Add-in |
| packagepal | Guidelines and Checklists for Building CRAN-Worthy Packages |
| packager | Create, Build and Maintain Packages |
| packageRank | Computation and Visualization of Package Download Counts and Percentile Ranks |
| packcircles | Circle Packing |
| packer | An Opinionated Framework for Using 'JavaScript' |
| packHV | A few Useful Functions for Statisticians |
| packMBPLSDA | Multi-Block Partial Least Squares Discriminant Analysis |
| packrat | A Dependency Management System for Projects and their R Package Dependencies |
| PACLasso | Penalized and Constrained Lasso Optimization |
| pacman | Package Management Tool |
| paco | Procrustes Application to Cophylogenetic Analysis |
| pacotest | Testing for Partial Copulas and the Simplifying Assumption in Vine Copulas |
| pacs | Supplementary Tools for R Packages Developers |
| PACVr | Plastome Assembly Coverage Visualization |
| Pade | Padé Approximant Coefficients |
| padr | Quickly Get Datetime Data Ready for Analysis |
| pafdR | Book Companion for Processing and Analyzing Financial Data with R |
| PAFit | Generative Mechanism Estimation in Temporal Complex Networks |
| pafr | Read, Manipulate and Visualize 'Pairwise mApping Format' Data |
| pagedown | Paginate the HTML Output of R Markdown with CSS for Print |
| pagemap | Create Mini Map for Web Pages |
| pagenum | Put Page Numbers on Graphics |
| pageviews | An API Client for Wikimedia Traffic Data |
| PAGFL | Joint Estimation of Latent Groups and Group-Specific Coefficients in Panel Data Models |
| pagoda2 | Single Cell Analysis and Differential Expression |
| PAGWAS | Pathway Analysis Methods for Genomewide Association Data |
| PAICE | Phylogeographic Analysis of Island Colonization Events |
| painbow | Use XKCD's "Painbow" Colormap in ggplot2 |
| painter | Creation and Manipulation of Color Palettes |
| paintingr | Painting Palettes Generator |
| paintmap | Plotting Paintmaps |
| PairedData | Paired Data Analysis |
| pairsD3 | D3 Scatterplot Matrices |
| PairViz | Visualization using Graph Traversal |
| pairwise | Rasch Model Parameters by Pairwise Algorithm |
| pairwiseCI | Confidence Intervals for Two Sample Comparisons |
| pak | Another Approach to Package Installation |
| PakNAcc | 'shiny' App for National Accounts |
| PakPC | 'shiny' App to Analyze Pakistan's Population Census Data |
| PakPC2017 | Pakistan Population Census 2017 |
| PakPC2023 | Pakistan Population Census 2023 |
| PakPMICS2014Ch | Multiple Indicator Cluster Survey (MICS) 2014 Child Questionnaire Data for Punjab, Pakistan |
| PakPMICS2014HH | Multiple Indicator Cluster Survey (MICS) 2014 Household Questionnaire Data for Punjab, Pakistan |
| PakPMICS2014HL | Multiple Indicator Cluster Survey (MICS) 2014 Household Listing Questionnaire Data for Punjab, Pakistan |
| PakPMICS2014Wm | Multiple Indicator Cluster Survey (MICS) 2014 Women Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018 | Multiple Indicator Cluster Survey (MICS) 2017-18 Data for Punjab, Pakistan |
| PakPMICS2018bh | Multiple Indicator Cluster Survey (MICS) 2017-18 Birth History of Children Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018fs | Multiple Indicator Cluster Survey (MICS) 2017-18 Children Age 5-17 Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018hh | Multiple Indicator Cluster Survey (MICS) 2017-18 Household Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018mm | Multiple Indicator Cluster Survey (MICS) 2017-18 Maternal Mortality Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018mn | Multiple Indicator Cluster Survey (MICS) 2017-18 Men Questionnaire Data for Punjab, Pakistan |
| pakret | Cite 'R' Packages on the Fly in 'R Markdown' and 'Quarto' |
| palaeoSig | Significance Tests for Palaeoenvironmental Reconstructions |
| palaeoverse | Prepare and Explore Data for Palaeobiological Analyses |
| palasso | Sparse Regression with Paired Covariates |
| pald | Partitioned Local Depth for Community Structure in Data |
| paleoAM | Simulating Assemblage Models of Abundance for the Fossil Record |
| paleobioDB | Download and Process Data from the Paleobiology Database |
| paleobuddy | Simulating Diversification Dynamics |
| paleoDiv | Extracting and Visualizing Paleobiodiversity |
| paleomorph | Geometric Morphometric Tools for Paleobiology |
| paleopop | Pattern-Oriented Modeling Framework for Coupled Niche-Population Paleo-Climatic Models |
| paleotree | Paleontological and Phylogenetic Analyses of Evolution |
| paleoTS | Analyze Paleontological Time-Series |
| palette | Color Scheme Helpers |
| paletteer | Comprehensive Collection of Color Palettes |
| paletteknife | Create Colour Scales and Legend from Continuous or Categorical Vectors |
| palettes | Methods for Colour Vectors and Colour Palettes |
| palettesForR | GPL Palettes Copied from 'Gimp' and 'Inkscape' |
| palettetown | Use Pokemon Inspired Colour Palettes |
| palinsol | Insolation for Palaeoclimate Studies |
| palm | Fitting Point Process Models via the Palm Likelihood |
| palmerpenguins | Palmer Archipelago (Antarctica) Penguin Data |
| PaLMr | Interface for 'Google Pathways Language Model 2 (PaLM 2)' |
| palmtree | Partially Additive (Generalized) Linear Model Trees |
| palr | Colour Palettes for Data |
| pals | Color Palettes, Colormaps, and Tools to Evaluate Them |
| PamBinaries | Read and Process 'Pamguard' Binary Data |
| PAmeasures | Prediction and Accuracy Measures for Nonlinear Models and for Right-Censored Time-to-Event Data |
| PAMhm | Generate Heatmaps Based on Partitioning Around Medoids (PAM) |
| pamm | Power Analysis for Random Effects in Mixed Models |
| PAMmisc | Miscellaneous Functions for Passive Acoustic Analysis |
| pammtools | Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis |
| PAMpal | Load and Process Passive Acoustic Data |
| pampe | Implementation of the Panel Data Approach Method for Program Evaluation |
| pamr | Pam: Prediction Analysis for Microarrays |
| PAMscapes | Tools for Summarising and Analysing Soundscape Data |
| pan | Multiple Imputation for Multivariate Panel or Clustered Data |
| PANACEA | Personalized Network-Based Anti-Cancer Therapy Evaluation |
| pAnalysis | Benchmarking and Rescaling R2 using Noise Percentile Analysis |
| PanCanVarSel | Pan-Cancer Variable Selection |
| pandemics | Monitoring a Developing Pandemic with Available Data |
| pander | An R 'Pandoc' Writer |
| pandoc | Manage and Run Universal Converter 'Pandoc' from 'R' |
| pandocfilters | Pandoc Filters for R |
| Pandora | Retrieve Data using the API of the 'Pandora' Data Platform |
| panelaggregation | Aggregate Longitudinal Survey Data |
| PanelCount | Random Effects and/or Sample Selection Models for Panel Count Data |
| panelhetero | Panel Data Analysis with Heterogeneous Dynamics |
| PanelMatch | Matching Methods for Causal Inference with Time-Series Cross-Sectional Data |
| panelPomp | Inference for Panel Partially Observed Markov Processes |
| panelr | Regression Models and Utilities for Repeated Measures and Panel Data |
| panelsummary | Create Publication-Ready Regression Tables with Panels |
| panelSUR | Two-Way Error Component SUR Systems Estimation on Unbalanced Panel Data |
| PanelTM | Two- And Three-Way Dynamic Panel Threshold Regression Model for Change Point Detection |
| panelvar | Panel Vector Autoregression |
| panelView | Visualizing Panel Data |
| panelWranglR | Panel Data Wrangling Tools |
| pangaear | Client for the 'Pangaea' Database |
| PanJen | A Semi-Parametric Test for Specifying Functional Form |
| pannotator | Visualisation and Annotation of 360 Degree Imagery |
| panstarrs | Interface to the Pan-STARRS API |
| PantaRhei | Plots Sankey Diagrams |
| papaja | Prepare American Psychological Association Journal Articles with R Markdown |
| papci | Prevalence Adjusted PPV Confidence Interval |
| papeR | A Toolbox for Writing Pretty Papers and Reports |
| paperplanes | Distance Recordings from a Paper Plane Folding/Flying Experiment |
| parabar | Progress Bar for Parallel Tasks |
| parade | Pen's Income Parades |
| paradox | Define and Work with Parameter Spaces for Complex Algorithms |
| parafac4microbiome | Parallel Factor Analysis Modelling of Longitudinal Microbiome Data |
| parallelDist | Parallel Distance Matrix Computation using Multiple Threads |
| ParallelLogger | Support for Parallel Computation, Logging, and Function Automation |
| parallelly | Enhancing the 'parallel' Package |
| parallelMap | Unified Interface to Parallelization Back-Ends |
| parallelMCMCcombine | Combining Subset MCMC Samples to Estimate a Posterior Density |
| parallelpam | Parallel Partitioning-Around-Medoids (PAM) for Big Sets of Data |
| ParallelPC | Paralellised Versions of Constraint Based Causal Discovery Algorithms |
| parallelPlot | 'htmlwidget' for a Parallel Coordinates Plot |
| param2moment | Raw, Central and Standardized Moments of Parametric Distributions |
| paramDemo | Parametric and Non-Parametric Demographic Functions and Applications |
| parameters | Processing of Model Parameters |
| paramGUI | A Shiny GUI for some Parameter Estimation Examples |
| ParamHelpers | Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning |
| paramhetero | Numeric and Visual Comparisons of Heterogeneity in Parametric Models |
| paramlink | Parametric Linkage and Other Pedigree Analysis in R |
| paramlink2 | Parametric Linkage Analysis |
| paramsim | Parameterized Simulation |
| paramtest | Run a Function Iteratively While Varying Parameters |
| paran | Horn's Test of Principal Components/Factors |
| ParBayesianOptimization | Parallel Bayesian Optimization of Hyperparameters |
| parcats | Interactive Parallel Categories Diagrams for 'easyalluvial' |
| parcr | Construct Parsers for Structured Text Files |
| ParDNAcopy | Parallel implementation of the "segment" function of package "DNAcopy" |
| Pareto | The Pareto, Piecewise Pareto and Generalized Pareto Distribution |
| ParetoPosStable | Computing, Fitting and Validating the PPS Distribution |
| parfm | Parametric Frailty Models |
| pargasite | Pollution-Associated Risk Geospatial Analysis Site |
| parglm | Parallel GLM |
| pARI | Permutation-Based All-Resolutions Inference |
| Paris2024Colours | Color Palettes Inspired by Paris 2024 Olympic and Paralympic Games |
| parma | Portfolio Allocation and Risk Management Applications |
| parmigene | Parallel Mutual Information Estimation for Gene Network Reconstruction |
| parmsurvfit | Parametric Models for Survival Data |
| paropt | Parameter Optimizing of ODE-Systems |
| parqr | Read in Multi-Part Parquet Files |
| parquetize | Convert Files to Parquet Format |
| parsec | Partial Orders in Socio-Economics |
| parsedate | Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats |
| parsel | Parallel Dynamic Web-Scraping Using 'RSelenium' |
| parsermd | Formal Parser and Related Tools for R Markdown Documents |
| parseRPDR | Parse and Manipulate Research Patient Data Registry ('RPDR') Text Queries |
| parSim | Parallel Simulation Studies |
| parsnip | A Common API to Modeling and Analysis Functions |
| PartCensReg | Estimation and Diagnostics for Partially Linear Censored Regression Models Based on Heavy-Tailed Distributions |
| partDSA | Partitioning Using Deletion, Substitution, and Addition Moves |
| partialised | Partialised Functions |
| Partiallyoverlapping | Partially Overlapping Samples Tests |
| PartialNetwork | Estimating Peer Effects Using Partial Network Data |
| particle.swarm.optimisation | Optimisation with Particle Swarm Optimisation |
| particles | A Graph Based Particle Simulator Based on D3-Force |
| parTimeROC | Parametric Time-Dependent Receiver Operating Characteristic |
| partition | Agglomerative Partitioning Framework for Dimension Reduction |
| partitionBEFsp | Methods for Calculating the Loreau & Hector 2001 BEF Partition |
| partitionComparison | Implements Measures for the Comparison of Two Partitions |
| partitionMetric | Compute a distance metric between two partitions of a set |
| partitions | Additive Partitions of Integers |
| partools | Tools for the 'Parallel' Package |
| partR2 | Partitioning R2 in GLMMs |
| partsm | Periodic Autoregressive Time Series Models |
| parttime | Partial Datetime Handling |
| party | A Laboratory for Recursive Partytioning |
| partykit | A Toolkit for Recursive Partytioning |
| parzer | Parse Messy Geographic Coordinates |
| PAS | Polygenic Analysis System (PAS) |
| pasadr | An Implementation of Process-Aware Stealthy Attack Detection(PASAD) |
| PASenseWear | Summarize Daily Physical Activity from 'SenseWear' Accelerometer Data |
| pass.lme | Power and Sample Size for Linear Mixed Effect Models |
| PASSED | Calculate Power and Sample Size for Two Sample Mean Tests |
| PAsso | Assessing the Partial Association Between Ordinal Variables |
| passport | Travel Smoothly Between Country Name and Code Formats |
| passt | Probability Associator Time (PASS-T) |
| password | Create Random Passwords |
| pastaPlot | Spaghetti-Plot Fixed and Random Effects of Linear Mixed Models |
| pastboon | Simulation of Parameterized Stochastic Boolean Networks |
| pastclim | Manipulate Time Series of Palaeoclimate Reconstructions |
| pasteAsComment | 'RStudio' Addin to Paste the Clipboard as a Comment Block or a 'roxygen' Block |
| pastecs | Package for Analysis of Space-Time Ecological Series |
| PASWR | Probability and Statistics with R |
| PASWR2 | Probability and Statistics with R, Second Edition |
| patchDVI | Package to Patch '.dvi' or '.synctex' Files |
| patchSynctex | Communication Between Editor and Viewer for Literate Programs |
| patchwork | The Composer of Plots |
| patentr | Access USPTO Bulk Data in Tidy Rectangular Format |
| patentsview | An R Client to the 'PatentsView' API |
| Path.Analysis | Path Coefficient Analysis |
| path.chain | Concise Structure for Chainable Paths |
| pathfindR | Enrichment Analysis Utilizing Active Subnetworks |
| pathfindR.data | Data Package for 'pathfindR' |
| pathling | A Library for using 'Pathling' |
| pathlit | An SDK for the PathLit Engine |
| pathmodelfit | Path Component Fit Indices for Latent Structural Equation Models |
| paths | An Imputation Approach to Estimating Path-Specific Causal Effects |
| pathviewr | Wrangle, Analyze, and Visualize Animal Movement Data |
| PathwaySpace | Spatial Projection of Network Signals along Geodesic Paths |
| pathwayTMB | Pathway Based Tumor Mutational Burden |
| PatientProfiles | Identify Characteristics of Patients in the OMOP Common Data Model |
| patientProfilesVis | Visualization of Patient Profiles |
| patrick | Parameterized Unit Testing |
| patternator | Feature Extraction from Female Brown Anole Lizard Dorsal Patterns |
| patterncausality | Pattern Causality Algorithm |
| patternize | Quantification of Color Pattern Variation |
| patternplot | Versatile Pie Charts, Ring Charts, Bar Charts and Box Plots using Patterns, Colors and Images |
| Patterns | Deciphering Biological Networks with Patterned Heterogeneous Measurements |
| pavo | Perceptual Analysis, Visualization and Organization of Spectral Colour Data |
| pawacc | Physical Activity with Accelerometers |
| paws | Amazon Web Services Software Development Kit |
| paws.analytics | 'Amazon Web Services' Analytics Services |
| paws.application.integration | 'Amazon Web Services' Application Integration Services |
| paws.common | Paws Low-Level Amazon Web Services API |
| paws.compute | 'Amazon Web Services' Compute Services |
| paws.cost.management | 'Amazon Web Services' Cost Management Services |
| paws.customer.engagement | 'Amazon Web Services' Customer Engagement Services |
| paws.database | 'Amazon Web Services' Database Services |
| paws.developer.tools | 'Amazon Web Services' Developer Tools Services |
| paws.end.user.computing | 'Amazon Web Services' End User Computing Services |
| paws.machine.learning | 'Amazon Web Services' Machine Learning Services |
| paws.management | 'Amazon Web Services' Management & Governance Services |
| paws.networking | 'Amazon Web Services' Networking & Content Delivery Services |
| paws.security.identity | 'Amazon Web Services' Security, Identity, & Compliance Services |
| paws.storage | 'Amazon Web Services' Storage Services |
| pawscore | Pain Assessment at Withdrawal Speeds (PAWS) |
| pbANOVA | Parametric Bootstrap for ANOVA Models |
| pbapply | Adding Progress Bar to '*apply' Functions |
| pbatR | Pedigree/Family-Based Genetic Association Tests Analysis and Power |
| pbbd | Position Balanced and Nearly Position Balanced Block Designs |
| pbcc | Percentile-Based Control Chart |
| PBD | Protracted Birth-Death Model of Diversification |
| pbdMPI | R Interface to MPI for HPC Clusters (Programming with Big Data Project) |
| pbdSLAP | Programming with Big Data – Scalable Linear Algebra Packages |
| pbdZMQ | Programming with Big Data – Interface to 'ZeroMQ' |
| PBIBD | Partially Balanced Incomplete Block Designs |
| PBImisc | A Set of Datasets Used in My Classes or in the Book 'Modele Liniowe i Mieszane w R, Wraz z Przykladami w Analizie Danych' |
| PBIR | Estimating the Probability of Being in Response and Related Outcomes |
| pbivnorm | Vectorized Bivariate Normal CDF |
| pbkrtest | Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models |
| pbm | Protein Binding Models |
| pbmcapply | Tracking the Progress of Mc*pply with Progress Bar |
| PBNPA | Permutation Based Non-Parametric Analysis of CRISPR Screen Data |
| pbo | Probability of Backtest Overfitting |
| pbox | Exploring Multivariate Spaces with Probability Boxes |
| pbr | Find a Cold One Near You |
| pBrackets | Plot Brackets |
| pbs | Periodic B Splines |
| PBSadmb | ADMB for R Using Scripts or GUI |
| PBSddesolve | Solver for Delay Differential Equations |
| PBSmapping | Mapping Fisheries Data and Spatial Analysis Tools |
| PBSmodelling | GUI Tools Made Easy: Interact with Models and Explore Data |
| PBtDesigns | Partially Balanced t-Designs (PBtDesigns) |
| pbv | Probabilities for Bivariate Normal Distribution |
| pcadapt | Fast Principal Component Analysis for Outlier Detection |
| PCADSC | Tools for Principal Component Analysis-Based Data Structure Comparisons |
| pcal | Calibration of P-Values for Point Null Hypothesis Testing |
| pcaL1 | L1-Norm PCA Methods |
| pcalg | Methods for Graphical Models and Causal Inference |
| pCalibrate | Bayesian Calibrations of p-Values |
| pcalls | Pricing of Different Types of Call |
| PCAmatchR | Match Cases to Controls Based on Genotype Principal Components |
| PCAmixdata | Multivariate Analysis of Mixed Data |
| pcaone | Fast and Accurate Randomized Singular Value Decomposition Algorithms with 'PCAone' |
| PCAPAM50 | Enhanced 'PAM50' Subtyping of Breast Cancer |
| pcaPP | Robust PCA by Projection Pursuit |
| pcatsAPIclientR | 'PCATS' API Client |
| PCBS | Principal Component BiSulfite |
| pccc | Pediatric Complex Chronic Conditions |
| PCDimension | Finding the Number of Significant Principal Components |
| pcdpca | Dynamic Principal Components for Periodically Correlated Functional Time Series |
| pcds | Proximity Catch Digraphs and Their Applications |
| pcds.ugraph | Underlying Graphs of Proximity Catch Digraphs and Their Applications |
| pcensmix | Model Fitting to Progressively Censored Mixture Data |
| pcev | Principal Component of Explained Variance |
| pcFactorStan | Stan Models for the Paired Comparison Factor Model |
| PCFAM | Computation of Ancestry Scores with Mixed Families and Unrelated Individuals |
| pcg | Preconditioned Conjugate Gradient Algorithm for solving Ax=b |
| pcgen | Reconstruction of Causal Networks for Data with Random Genetic Effects |
| PCGII | Partial Correlation Graph with Information Incorporation |
| PCGSE | Principal Component Gene Set Enrichment |
| pch | Piecewise Constant Hazard Models for Censored and Truncated Data |
| pchc | Bayesian Network Learning with the PCHC and Related Algorithms |
| pci | A Collection of Process Capability Index Functions |
| PCICt | Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars |
| pcIRT | IRT Models for Polytomous and Continuous Item Responses |
| PCL | Proximal Causal Learning |
| pcLasso | Principal Components Lasso |
| PCLassoReg | Group Regression Models for Risk Protein Complex Identification |
| pcmabc | Approximate Bayesian Computations for Phylogenetic Comparative Methods |
| PCMBase | Simulation and Likelihood Calculation of Phylogenetic Comparative Models |
| PCMBaseCpp | Fast Likelihood Calculation for Phylogenetic Comparative Models |
| PCMRS | Model Response Styles in Partial Credit Models |
| pcnetmeta | Patient-Centered Network Meta-Analysis |
| pco | Panel Cointegration Tests |
| PCObw | Bandwidth Selector with Penalized Comparison to Overfitting Criterion |
| pCODE | Estimation of an Ordinary Differential Equation Model by Parameter Cascade Method |
| PCovR | Principal Covariates Regression |
| PCPS | Principal Coordinates of Phylogenetic Structure |
| pcr | Analyzing Real-Time Quantitative PCR Data |
| PCRA | Companion to Portfolio Construction and Risk Analysis |
| PCS | Calculate the Probability of Correct Selection (PCS) |
| pcse | Panel-Corrected Standard Error Estimation in R |
| PCSinR | Parallel Constraint Satisfaction Networks in R |
| pcsstools | Tools for Regression Using Pre-Computed Summary Statistics |
| pcSteiner | Convenient Tool for Solving the Prize-Collecting Steiner Tree Problem |
| pctax | Professional Comprehensive Omics Data Analysis |
| pcts | Periodically Correlated and Periodically Integrated Time Series |
| pcutils | Some Useful Functions for Statistics and Visualization |
| pcv | Procrustes Cross-Validation |
| pcvr | Plant Phenotyping and Bayesian Statistics |
| pda | Privacy-Preserving Distributed Algorithms |
| pdc | Permutation Distribution Clustering |
| PDE | Extract Tables and Sentences from PDFs with User Interface |
| pder | Panel Data Econometrics with R |
| pdfCluster | Cluster Analysis via Nonparametric Density Estimation |
| PDFEstimator | Multivariate Nonparametric Probability Density Estimator |
| pdfetch | Fetch Economic and Financial Time Series Data from Public Sources |
| pdfminer | Read Portable Document Format (PDF) Files |
| pdfsearch | Search Tools for PDF Files |
| pdftables | Programmatic Conversion of PDF Tables |
| pdftools | Text Extraction, Rendering and Converting of PDF Documents |
| pdi | Phenotypic Index Measures for Oak Decline Severity |
| pdist | Partitioned Distance Function |
| PDM | Photogrammetric Distances Measurer |
| PDMIF | Fits Heterogeneous Panel Data Models |
| pdmod | Proximal/Distal Modeling Framework for Pavlovian Conditioning Phenomena |
| PDN | Personalized Disease Network |
| pdp | Partial Dependence Plots |
| PdPDB | Pattern Discovery in PDB Structures of Metalloproteins |
| pdqr | Work with Custom Distribution Functions |
| PDQutils | PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations |
| pdR | Threshold Model and Unit Root Tests in Cross-Section and Time Series Data |
| PDSCE | Positive Definite Sparse Covariance Estimators |
| PDShiny | 'Probability Distribution Shiny' |
| pdSpecEst | An Analysis Toolbox for Hermitian Positive Definite Matrices |
| pdt | Permutation Distancing Test |
| PDtoolkit | Collection of Tools for PD Rating Model Development and Validation |
| PDXpower | Time to Event Outcome in Experimental Designs of Pre-Clinical Studies |
| pdxTrees | Data Package of Portland, Oregon Trees |
| pdynmc | Moment Condition Based Estimation of Linear Dynamic Panel Data Models |
| peacesciencer | Tools and Data for Quantitative Peace Science Research |
| PEACH | Pareto Enrichment Analysis for Combining Heterogeneous Datasets |
| Peacock.test | Two and Three Dimensional Kolmogorov-Smirnov Two-Sample Tests |
| peacots | Periodogram Peaks in Correlated Time Series |
| PeakError | Compute the Label Error of Peak Calls |
| peakRAM | Monitor the Total and Peak RAM Used by an Expression or Function |
| PeakSegDisk | Disk-Based Constrained Change-Point Detection |
| PeakSegDP | Dynamic Programming Algorithm for Peak Detection in ChIP-Seq Data |
| PeakSegJoint | Joint Peak Detection in Several ChIP-Seq Samples |
| PeakSegOptimal | Optimal Segmentation Subject to Up-Down Constraints |
| pearson7 | Maximum Likelihood Inference for the Pearson VII Distribution with Shape Parameter 3/2 |
| PearsonDS | Pearson Distribution System |
| PearsonICA | Independent Component Analysis using Score Functions from the Pearson System |
| pec | Prediction Error Curves for Risk Prediction Models in Survival Analysis |
| pecora | Permutation Conditional Random Tests |
| pedalfast.data | PEDALFAST Data |
| pedbp | Pediatric Blood Pressure |
| pedbuildr | Pedigree Reconstruction |
| pedFamilias | Import and Export 'Familias' Files |
| pedgene | Gene-Level Variant Association Tests for Pedigree Data |
| pedigree | Pedigree Functions |
| pedigreemm | Pedigree-Based Mixed-Effects Models |
| pedigreeTools | Versatile Functions for Working with Pedigrees |
| pedMermaid | Pedigree Mermaid Syntax |
| pedmut | Mutation Models for Pedigree Likelihood Computations |
| pedometrics | Miscellaneous Pedometric Tools |
| pedprobr | Probability Computations on Pedigrees |
| pedquant | Public Economic Data and Quantitative Analysis |
| pedSimulate | Pedigree, Genetic Merit, Phenotype, and Genotype Simulation |
| pedsuite | Easy Installation of the 'pedsuite' Packages for Pedigree Analysis |
| pedtools | Creating and Working with Pedigrees and Marker Data |
| pedtricks | Visualize, Summarize and Simulate Data from Pedigrees |
| peermodels | Client-Side R API Wrapper for Peer Models Network Model Repository |
| PeerPerformance | Luck-Corrected Peer Performance Analysis in R |
| pegas | Population and Evolutionary Genetics Analysis System |
| PEGroupTesting | Population Proportion Estimation using Group Testing |
| PEIMAN2 | Post-Translational Modification Enrichment, Integration, and Matching Analysis |
| PEIP | Geophysical Inverse Theory and Optimization |
| PEkit | Partition Exchangeability Toolkit |
| pell | Data About Historic Pell Grant Distribution in the US |
| PELVIS | Probabilistic Sex Estimate using Logistic Regression, Based on VISual Traits of the Human Os Coxae |
| pema | Penalized Meta-Analysis |
| pempi | Proportion Estimation with Marginal Proxy Information |
| pems.utils | Portable Emissions (and Other Mobile) Measurement System Utilities |
| pemultinom | L1-Penalized Multinomial Regression with Statistical Inference |
| penAFT | Fit the Regularized Gehan Estimator with Elastic Net and Sparse Group Lasso Penalties |
| penalized | L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model |
| penalizedcdf | Estimate a Penalized Linear Model using the CDF Penalty Function |
| penalizedclr | Integrative Penalized Conditional Logistic Regression |
| penalizedSVM | Feature Selection SVM using Penalty Functions |
| penaltyLearning | Penalty Learning |
| pencal | Penalized Regression Calibration (PRC) for the Dynamic Prediction of Survival |
| pencopulaCond | Estimating Non-Simplified Vine Copulas Using Penalized Splines |
| PenCoxFrail | Regularization in Cox Frailty Models |
| pendensity | Density Estimation with a Penalized Mixture Approach |
| penfa | Single- And Multiple-Group Penalized Factor Analysis |
| PenIC | Semiparametric Regression Analysis of Interval-Censored Data using Penalized Splines |
| penMSM | Estimating Regularized Multi-state Models Using L1 Penalties |
| penPHcure | Variable Selection in PH Cure Model with Time-Varying Covariates |
| penppml | Penalized Poisson Pseudo Maximum Likelihood Regression |
| pense | Penalized Elastic Net S/MM-Estimator of Regression |
| pensim | Simulation of High-Dimensional Data and Parallelized Repeated Penalized Regression |
| pensynth | Penalized Synthetic Control Estimation |
| peopleanalytics | Data Sets for Craig Starbuck's Book, "The Fundamentals of People Analytics: With Applications in R" |
| peopleanalyticsdata | Data Sets for Keith McNulty's Handbook of Regression Modeling in People Analytics |
| pEPA | Tests of Equal Predictive Accuracy for Panels of Forecasts |
| PEPBVS | Bayesian Variable Selection using Power-Expected-Posterior Prior |
| pepe | Data Manipulation |
| peperr | Parallelised Estimation of Prediction Error |
| PepMapViz | A Versatile Toolkit for Peptide Mapping, Visualization, and Comparative Exploration |
| peppm | Piecewise Exponential Distribution with Random Time Grids |
| pepr | Reading Portable Encapsulated Projects |
| PepSAVIms | PepSAVI-MS Data Analysis |
| Peptides | Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences |
| peptoolkit | A Toolkit for Using Peptide Sequences in Machine Learning |
| peramo | Permutation Tests for Randomization Model |
| perARMA | Periodic Time Series Analysis |
| Perc | Using Percolation and Conductance to Find Information Flow Certainty in a Direct Network |
| perccalc | Estimate Percentiles from an Ordered Categorical Variable |
| PerFit | Person Fit |
| PerfMeas | Performance Measures for Ranking and Classification Tasks |
| performance | Assessment of Regression Models Performance |
| PerformanceAnalytics | Econometric Tools for Performance and Risk Analysis |
| performanceEstimation | An Infra-Structure for Performance Estimation of Predictive Models |
| peRiodiCS | Functions for Generating Periodic Curves |
| PeriodicTable | Periodic Table of the Elements |
| periscope | Enterprise Streamlined 'Shiny' Application Framework |
| periscope2 | Enterprise Streamlined 'shiny' Application Framework Using 'bs4Dash' |
| PERK | Predicting Environmental Concentration and Risk |
| perm | Exact or Asymptotic Permutation Tests |
| PermAlgo | Permutational Algorithm to Simulate Survival Data |
| PERMANOVA | Multivariate Analysis of Variance Based on Distances and Permutations |
| PerMat | Performance Metrics in Predictive Modeling |
| permChacko | Chacko Test for Order-Restriction with Permutation |
| PermCor | Robust Permutation Tests of Correlation Coefficients |
| permGS | Permutational Group Sequential Test for Time-to-Event Data |
| permimp | Conditional Permutation Importance |
| permPATH | Permutation Based Gene Expression Pathway Analysis |
| perms | Fast Permutation Computation |
| permubiome | A Permutation Based Test for Biomarker Discovery in Microbiome Data |
| permuco | Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals |
| PermutationR | Conduct Permutation Analysis of Variance in R |
| permutations | The Symmetric Group: Permutations of a Finite Set |
| permute | Functions for Generating Restricted Permutations of Data |
| permutes | Permutation Tests for Time Series Data |
| permutest | Run Permutation Tests and Construct Associated Confidence Intervals |
| perplexR | A Coding Assistant using Perplexity's Large Language Models |
| PerRegMod | Fitting Periodic Coefficients Linear Regression Models |
| perry | Resampling-Based Prediction Error Estimation for Regression Models |
| perryExamples | Examples for Integrating Prediction Error Estimation into Regression Models |
| persDx | Personalized Diagnostics Rules for Subgroup Identification and Personalized Biomarker Discovery |
| PerseusR | Perseus R Interop |
| PersianStemmer | Persian Stemmer for Text Analysis |
| PersomicsArray | Automated Persomics Array Image Extraction |
| personalized | Estimation and Validation Methods for Subgroup Identification and Personalized Medicine |
| personalized2part | Two-Part Estimation of Treatment Rules for Semi-Continuous Data |
| personalr | Automated Personal Package Setup |
| personr | Test Your Personality |
| perspectev | Permutation of Species During Turnover Events |
| persval | Computing Personal Values Scores |
| perturbR | Random Perturbation of Count Matrices |
| peruflorads43 | Reviewed Official Classification of Endangered Wild Flora Species in Peru |
| peruse | A Tidy API for Sequence Iteration and Set Comprehension |
| perutimber | Catalogue of the Timber Forest Species of the Peruvian Amazon |
| pesel | Automatic Estimation of Number of Principal Components in PCA |
| PesticideLoadIndicator | Computes Danish Pesticide Load Indicator |
| pestr | Interface to Download Data on Pests and Hosts from 'EPPO' |
| Petersen | Estimators for Two-Sample Capture-Recapture Studies |
| petersenlab | A Collection of R Functions by the Petersen Lab |
| PEtests | Power-Enhanced (PE) Tests for High-Dimensional Data |
| PetfindeR | 'Petfinder' API Wrapper |
| petitr | Relative Growth Rate |
| petrinetR | Building, Visualizing, Exporting and Replaying Petri Nets |
| pewdata | Reproducible Retrieval of Pew Research Center Datasets |
| pexm | Loading a JAGS Module for the Piecewise Exponential Distribution |
| pez | Phylogenetics for the Environmental Sciences |
| pfa | Estimates False Discovery Proportion Under Arbitrary Covariance Dependence |
| pfica | Independent Components Analysis Techniques for Functional Data |
| PFIM | Population Fisher Information Matrix |
| PFLR | Estimating Penalized Functional Linear Regression |
| pfr | Interface to the 'C++' Library 'Pf' |
| pg | Polya Gamma Distribution Sampler |
| pgam | Poisson-Gamma Additive Models |
| pgdraw | Generate Random Samples from the Polya-Gamma Distribution |
| PGEE | Penalized Generalized Estimating Equations in High-Dimension |
| pgee.mixed | Penalized Generalized Estimating Equations for Bivariate Mixed Outcomes |
| pgenlibr | PLINK 2 Binary (.pgen) Reader |
| pgirmess | Spatial Analysis and Data Mining for Field Ecologists |
| pgKDEsphere | Parametrically Guided Kernel Density Estimator for Spherical Data |
| pglm | Panel Generalized Linear Models |
| PGM2 | Nested Resolvable Designs and their Associated Uniform Designs |
| pgmm | Parsimonious Gaussian Mixture Models |
| pgnorm | The p-Generalized Normal Distribution |
| pGPx | Pseudo-Realizations for Gaussian Process Excursions |
| pgraph | Build Dependency Graphs using Projection |
| PGRdup | Discover Probable Duplicates in Plant Genetic Resources Collections |
| pGRN | Single-Cell RNA Sequencing Pseudo-Time Based Gene Regulatory Network Inference |
| pgsc | Computes Powell's Generalized Synthetic Control Estimator |
| pgTools | Functions for Generating PostgreSQL Statements/Scripts |
| PH1XBAR | Phase I Shewhart X-Bar Chart |
| ph2bayes | Bayesian Single-Arm Phase II Designs |
| ph2bye | Phase II Clinical Trial Design Using Bayesian Methods |
| ph2mult | Phase II Clinical Trial Design for Multinomial Endpoints |
| phacking | Sensitivity Analysis for p-Hacking in Meta-Analyses |
| PhageCocktail | Design of the Best Phage Cocktail |
| phangorn | Phylogenetic Reconstruction and Analysis |
| phantSEM | Create Phantom Variables in Structural Equation Models for Sensitivity Analyses |
| pharmaRTF | Enhanced RTF Wrapper for Use with Existing Table Packages |
| pharmaverse | Navigate 'Pharmaverse' |
| pharmaverseadam | ADaM Test Data for the 'Pharmaverse' Family of Packages |
| pharmaversesdtm | SDTM Test Data for the 'Pharmaverse' Family of Packages |
| pharmr | Interface to the 'Pharmpy' 'Pharmacometrics' Library |
| phase | Analyse Biological Time-Series Data |
| Phase123 | Simulating and Conducting Phase 123 Trials |
| Phase12Compare | Simulates SPSO and Efftox Phase 12 Trials with Correlated Outcomes |
| phase1PRMD | Personalized Repeated Measurement Design for Phase I Clinical Trials |
| phase1RMD | Repeated Measurement Design for Phase I Clinical Trial |
| phaseR | Phase Plane Analysis of One- And Two-Dimensional Autonomous ODE Systems |
| PhaseType | Inference for Phase-Type Distributions |
| PhaseTypeR | General-Purpose Phase-Type Functions |
| phateR | PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding |
| PHclust | Poisson Hurdle Clustering for Sparse Microbiome Data |
| phd | Permutation Testing in High-Dimensional Linear Models |
| phdcocktail | Enhance the Ease of R Experience as an Emerging Researcher |
| pheatmap | Pretty Heatmaps |
| pheble | Classifying High-Dimensional Phenotypes with Ensemble Learning |
| PheCAP | High-Throughput Phenotyping with EHR using a Common Automated Pipeline |
| phecodemap | Visualization for PheCode Mapping with ICD-9 and ICD-10-CM Codes |
| PHEindicatormethods | Common Public Health Statistics and their Confidence Intervals |
| phenesse | Estimate Phenological Metrics using Presence-Only Data |
| phenex | Auxiliary Functions for Phenological Data Analysis |
| PHENIX | Phenotypic Integration Index |
| phenmod | Auxiliary Functions for Phenological Data Processing, Modelling and Result Handling |
| phenModel | Insect Phenology Model Evaluation Based on Daily Temperatures |
| pheno | Auxiliary Functions for Phenological Data Analysis |
| phenocamr | Facilitates 'PhenoCam' Data Access and Time Series Post-Processing |
| phenoCDM | Continuous Development Models for Incremental Time-Series Analysis |
| phenofit | Extract Remote Sensing Vegetation Phenology |
| phenolocrop | Time-Series Models to the Crop Phenology |
| phenology | Tools to Manage a Parametric Function that Describes Phenology and More |
| phenomap | Projecting Satellite-Derived Phenology in Space |
| phenopix | Process Digital Images of a Vegetation Cover |
| PheNorm | Unsupervised Gold-Standard Label Free Phenotyping Algorithm for EHR Data |
| Phenotype | A Tool for Phenotypic Data Processing |
| PhenotypeSimulator | Flexible Phenotype Simulation from Different Genetic and Noise Models |
| PHENTHAUproc | Phenology Modelling of Thaumetopoea Processionea |
| phers | Calculate Phenotype Risk Scores |
| PHeval | Evaluation of the Proportional Hazards Assumption and Test for Comparing Survival Curves with a Standardized Score Process |
| PheVis | Automatic Phenotyping of Electronic Health Record at Visit Resolution |
| Phi2rho | Owen's T Function and Bivariate Normal Integral |
| phia | Post-Hoc Interaction Analysis |
| phiDelta | Tool for Phi Delta Analysis of Features |
| philentropy | Similarity and Distance Quantification Between Probability Functions |
| PhilipsHue | R Interface to the Philips Hue API |
| PHInfiniteEstimates | Tools for Inference in the Presence of a Monotone Likelihood |
| PhitestR | Analyzing the Heterogeneity of Single-Cell Populations |
| phm | Phrase Mining |
| phoenics | Pathways Longitudinal and Differential Analysis in Metabolomics |
| phoenix | The Phoenix Pediatric Sepsis and Septic Shock Criteria |
| phonenumber | Convert Letters to Numbers and Back as on a Telephone Keypad |
| phonfieldwork | Linguistic Phonetic Fieldwork Tools |
| phonics | Phonetic Spelling Algorithms |
| phonR | Tools for Phoneticians and Phonologists |
| phonTools | Tools for Phonetic and Acoustic Analyses |
| phosphoricons | 'Phosphor' Icons for R |
| photobiology | Photobiological Calculations |
| photobiologyFilters | Spectral Transmittance and Spectral Reflectance Data |
| photobiologyInOut | Read Spectral and Logged Data from Foreign Files |
| photobiologyLamps | Spectral Irradiance Data for Lamps |
| photobiologyLEDs | Spectral Data for Light-Emitting-Diodes |
| photobiologyPlants | Plant Photobiology Related Functions and Data |
| photobiologySensors | Response Data for Light Sensors |
| photobiologySun | Data for Sunlight Spectra |
| photobiologyWavebands | Waveband Definitions for UV, VIS, and IR Radiation |
| photon | High-Performance Geocoding using 'photon' |
| PhotosynQ | Connect to PhotosynQ |
| photosynthesis | Tools for Plant Ecophysiology & Modeling |
| phrases | Phrasal Verbs in English Club Website |
| phreeqc | R Interface to Geochemical Modeling Software |
| phsmethods | Standard Methods for Use in Public Health Scotland |
| PHSMM | Penalised Maximum Likelihood Estimation for Hidden Semi-Markov Models |
| phuassess | Proportional Habitat Use Assessment |
| phyclust | Phylogenetic Clustering (Phyloclustering) |
| phyext2 | An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase' |
| phylepic | Combined Visualisation of Phylogenetic and Epidemiological Data |
| phylin | Spatial Interpolation of Genetic Data |
| phylobase | Base Package for Phylogenetic Structures and Comparative Data |
| phylocanvas | Interactive Phylogenetic Trees Using the 'Phylocanvas' JavaScript Library |
| phyloclim | Integrating Phylogenetics and Climatic Niche Modeling |
| phylocomr | Interface to 'Phylocom' |
| PhylogeneticEM | Automatic Shift Detection using a Phylogenetic EM |
| PHYLOGR | Functions for Phylogenetically Based Statistical Analyses |
| phylogram | Dendrograms for Evolutionary Analysis |
| phylolm | Phylogenetic Linear Regression |
| phylolm.hp | Hierarchical Partitioning of R2 for Phylogenetic Linear Regression |
| phylometrics | Estimating Statistical Errors of Phylogenetic Metrics |
| phylopairs | Comparative Analyses of Lineage-Pair Traits |
| phylopath | Perform Phylogenetic Path Analysis |
| phyloraster | Evolutionary Diversity Metrics for Raster Data |
| phyloregion | Biogeographic Regionalization and Macroecology |
| phylosamp | Sample Size Calculations for Molecular and Phylogenetic Studies |
| phylosem | Phylogenetic Structural Equation Model |
| phyloseqGraphTest | Graph-Based Permutation Tests for Microbiome Data |
| phylosignal | Exploring the Phylogenetic Signal in Continuous Traits |
| phylotate | Phylogenies with Annotations |
| phylotools | Phylogenetic Tools for Eco-Phylogenetics |
| phyloTop | Calculating Topological Properties of Phylogenies |
| phylotypr | Classifying DNA Sequences to Taxonomic Groupings |
| phylter | Detect and Remove Outliers in Phylogenomics Datasets |
| phyr | Model Based Phylogenetic Analysis |
| phyreg | The Phylogenetic Regression of Grafen (1989) |
| PhysActBedRest | Marks Periods of 'Bedrest' in Actigraph Accelerometer Data |
| PhysicalActivity | Process Accelerometer Data for Physical Activity Measurement |
| PhySortR | A Fast, Flexible Tool for Sorting Phylogenetic Trees |
| phytoclass | Estimate Chla Concentrations of Phytoplankton Groups |
| phytools | Phylogenetic Tools for Comparative Biology (and Other Things) |
| PhytosanitaryCalculator | Phytosanitary Calculator for Inspection Plans Based on Risks |
| piar | Price Index Aggregation |
| picante | Integrating Phylogenies and Ecology |
| picasso | Pathwise Calibrated Sparse Shooting Algorithm |
| PICBayes | Bayesian Models for Partly Interval-Censored Data |
| picClip | Paste Box Input for 'Shiny' |
| picker | Pick Data Points from a Deck.gl Scatterplot |
| picohdr | Read, Write and Manipulate High Dynamic Range Images |
| picR | Predictive Information Criteria for Model Selection |
| pid | Process Improvement using Data |
| PieceExpIntensity | Bayesian Model to Find Changepoints Based on Rates and Count Data |
| piecemaker | Tools for Preparing Text for Tokenizers |
| piecenorms | Calculate a Piecewise Normalised Score Using Class Intervals |
| piecepackr | Board Game Graphics |
| piecewiseSEM | Piecewise Structural Equation Modeling |
| PieGlyph | Axis Invariant Scatter Pie Plots |
| piggyback | Managing Larger Data on a GitHub Repository |
| pii | Search Data Frames for Personally Identifiable Information |
| Pijavski | Global Univariate Minimization |
| pikchr | R Wrapper for 'pikchr' (PIC) Diagram Language |
| pillar | Coloured Formatting for Columns |
| pim | Fit Probabilistic Index Models |
| pimeta | Prediction Intervals for Random-Effects Meta-Analysis |
| pinfsc50 | Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' |
| pingers | Identify, Ping, and Log Internet Provider Connection Data |
| pingr | Check if a Remote Computer is Up |
| PINMA | Improved Methods for Constructing Prediction Intervals for Network Meta-Analysis |
| pinnacle.data | Market Odds Data from Pinnacle |
| pinochet | Data About the Victims of the Pinochet Regime, 1973-1990 |
| pinp | 'pinp' is not 'PNAS' |
| pins | Pin, Discover, and Share Resources |
| PINSPlus | Clustering Algorithm for Data Integration and Disease Subtyping |
| PINstimation | Estimation of the Probability of Informed Trading |
| pinterestadsR | Access to Pinterest Ads via the 'Windsor.ai' API |
| pinyin | Convert Chinese Characters into Pinyin, Sijiao, Wubi or Other Codes |
| pioneeR | Productivity and Efficiency Analysis using DEA |
| pipe.design | Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design |
| pipebind | Flexible Binding for Complex Function Evaluation with the Base R |> Pipe |
| pipefittr | Convert Nested Functions to Pipes |
| pipeliner | Machine Learning Pipelines for R |
| pipenostics | Diagnostics, Reliability and Predictive Maintenance of Pipeline Systems |
| pipeR | Multi-Paradigm Pipeline Implementation |
| piqp | R Interface to Proximal Interior Point Quadratic Programming Solver |
| piratings | Calculate Pi Ratings for Teams Competing in Sport Matches |
| pisaRT | Small Example Response and Response Time Data from PISA 2018 |
| piton | Parsing Expression Grammars in Rcpp |
| pivmet | Pivotal Methods for Bayesian Relabelling and k-Means Clustering |
| pivotaltrackR | A Client for the 'Pivotal Tracker' API |
| pivotea | Create Pivot Table Easily |
| pivottabler | Create Pivot Tables |
| piwikproR | Access 'Piwik Pro' Website Statistics |
| pixarfilms | Pixar Films and Achievements |
| pixelclasser | Classifies Image Pixels by Colour |
| pixelpuzzle | Puzzle Game for the R Console |
| pixels | Tools for Working with Image Pixels |
| pixiedust | Tables so Beautifully Fine-Tuned You Will Believe It's Magic |
| pixmap | Bitmap Images / Pixel Maps |
| PJFM | Variational Inference for High-Dimensional Joint Frailty Model |
| PK | Basic Non-Compartmental Pharmacokinetics |
| pk.unit.trans | Achieve Numerical Conversion Between Units Commonly Used in Pharmacokinetics |
| pk4adi | PK for Anesthetic Depth Indicators |
| PKbioanalysis | Pharmacokinetic Bioanalysis Experiments Design and Exploration |
| PKconverter | The Parameter Converter of the Pharmacokinetic Models |
| pkdata | Creates Pharmacokinetic/Pharmacodynamic (PK/PD) Data |
| pkgbuild | Find Tools Needed to Build R Packages |
| pkgcache | Cache 'CRAN'-Like Metadata and R Packages |
| pkgcond | Classed Error and Warning Conditions |
| pkgconfig | Private Configuration for 'R' Packages |
| pkgdepends | Package Dependency Resolution and Downloads |
| pkgdepR | Statically Determine Function Dependencies Between Packages |
| pkgdown | Make Static HTML Documentation for a Package |
| pkgfilecache | Download and Manage Optional Package Data |
| pkggraph | A Consistent and Intuitive Platform to Explore the Dependencies of Packages on the Comprehensive R Archive Network Like Repositories |
| pkgGraphR | Graph the Relationship Between Functions in an R Package |
| pkgKitten | Create Simple Packages Which Do not Upset R Package Checks |
| pkglite | Compact Package Representations |
| pkgload | Simulate Package Installation and Attach |
| pkgmaker | Development Utilities for R Packages |
| pkgndep | Analyze Dependency Heaviness of R Packages |
| pkgnet | Get Network Representation of an R Package |
| pkgnews | Retrieve R Package News Files |
| pkgsearch | Search and Query CRAN R Packages |
| pkgverse | Build a Meta-Package Universe |
| PKI | Public Key Infrastucture for R Based on the X.509 Standard |
| PKLMtest | Classification Based MCAR Test |
| pkmon | Least-Squares Estimator under k-Monotony Constraint for Discrete Functions |
| PKNCA | Perform Pharmacokinetic Non-Compartmental Analysis |
| PKPDsim | Tools for Performing Pharmacokinetic-Pharmacodynamic Simulations |
| pkr | Pharmacokinetics in R |
| pks | Probabilistic Knowledge Structures |
| pKSEA | Prediction-Based Kinase-Substrate Enrichment Analysis |
| pksensi | Global Sensitivity Analysis in Physiologically Based Kinetic Modeling |
| PL94171 | Tabulate P.L. 94-171 Redistricting Data Summary Files |
| plac | A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated Data |
| placer | PLastic ACcumulation Estimate using R (PLACER) |
| PlackettLuce | Plackett-Luce Models for Rankings |
| plainview | Plot Raster Images Interactively on a Plain HTML Canvas |
| plan | Tools for Project Planning |
| PlaneGeometry | Plane Geometry |
| Planesmuestra | Functions for Calculating Dodge Romig, MIL STD 105E and MIL STD 414 Acceptance Sampling Plan |
| PlanetNICFI | Processing of the 'Planet NICFI' Satellite Imagery |
| planets | Simple and Accessible Data from all Known Planets |
| planningML | A Sample Size Calculator for Machine Learning Applications in Healthcare |
| planr | Tools for Supply Chain Management, Demand and Supply Planning |
| planscorer | Score Redistricting Plans with 'PlanScore' |
| plantecophys | Modelling and Analysis of Leaf Gas Exchange Data |
| plantphysioR | Fundamental Formulas for Plant Physiology |
| plantTracker | Extract Demographic and Competition Data from Fine-Scale Maps |
| plaqr | Partially Linear Additive Quantile Regression |
| plasma | Partial LeAst Squares for Multiomic Analysis |
| PlasmaMutationDetector | Tumor Mutation Detection in Plasma |
| PlasmaMutationDetector2 | Tumor Mutation Detection in Plasma using Barcoding |
| Plasmidprofiler | Visualization of Plasmid Profile Results |
| plasso | Cross-Validated (Post-) Lasso |
| plater | Read, Tidy, and Display Data from Microtiter Plates |
| platetools | Tools and Plots for Multi-Well Plates |
| PlatformDesign | Optimal Two-Period Multiarm Platform Design with New Experimental Arms Added During the Trial |
| platowork | Data from a Test of the PlatoWork tDCS Headset |
| plattice | Lattice Plot for Panel Data |
| Platypus | Single-Cell Immune Repertoire and Gene Expression Analysis |
| play | Visualize Sports Data |
| PlayerChart | Generate Pizza Chart: Player Stats 0-100 |
| PlayerRatings | Dynamic Updating Methods for Player Ratings Estimation |
| pldamixture | Post-Linkage Data Analysis Based on Mixture Modelling |
| plde | Penalized Log-Density Estimation Using Legendre Polynomials |
| pleio | Pleiotropy Test for Multiple Traits on a Genetic Marker |
| pleiotest | Fast Sequential Pleiotropy Test |
| pleLMA | Pseudo-Likelihood Estimation of Log-Multiplicative Association Models |
| PLEXI | Multiplex Network Analysis |
| PLFD | Portmanteau Local Feature Discrimination for Matrix-Variate Data |
| plfm | Probabilistic Latent Feature Analysis |
| plfMA | A GUI to View, Design and Export Various Graphs of Data |
| plgp | Particle Learning of Gaussian Processes |
| plgraphics | User Oriented Plotting Functions |
| pliman | Tools for Plant Image Analysis |
| PLindleyROC | Receiver Operating Characteristic Based on Power Lindley Distribution |
| plink | IRT Separate Calibration Linking Methods |
| plinkFile | 'PLINK' (and 'GCTA') File Helpers |
| plinkQC | Genotype Quality Control with 'PLINK' |
| PLIS | Multiplicity Control using Pooled LIS Statistic |
| plm | Linear Models for Panel Data |
| PLMIX | Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings |
| PLmixed | Estimate (Generalized) Linear Mixed Models with Factor Structures |
| plmmr | Penalized Linear Mixed Models for Correlated Data |
| pln | Polytomous Logit-Normit (Graded Logistic) Model Estimation |
| PLNmodels | Poisson Lognormal Models |
| plnr | A System for Planing Analyses |
| plogr | The 'plog' C++ Logging Library |
| PLordprob | Multivariate Ordered Probit Model via Pairwise Likelihood |
| PLORN | Prediction with Less Overfitting and Robust to Noise |
| plot.matrix | Visualizes a Matrix as Heatmap |
| plot3D | Plotting Multi-Dimensional Data |
| plot3Drgl | Plotting Multi-Dimensional Data - Using 'rgl' |
| plot4fun | Just Plot for Fun |
| plotBart | Diagnostic and Plotting Functions to Supplement 'bartCause' |
| plotbb | Grammar of Graphics for 'base' Plot |
| PlotBivInvGaus | Density Contour Plot for Bivariate Inverse Gaussian Distribution |
| plotcli | Command Line Interface Plotting |
| PlotContour | Plot Contour Line |
| plotdap | Easily Visualize Data from 'ERDDAP' Servers via the 'rerddap' Package |
| plotDK | Plot Summary Statistics as Choropleth Maps of Danish Administrative Areas |
| PlotFTIR | Plot FTIR Spectra |
| plotfunctions | Various Functions to Facilitate Visualization of Data and Analysis |
| plotGMM | Tools for Visualizing Gaussian Mixture Models |
| plothelper | New Plots Based on 'ggplot2' and Functions to Create Regular Shapes |
| plotHMM | Plot Hidden Markov Models |
| plotluck | 'ggplot2' Version of "I'm Feeling Lucky!" |
| plotly | Create Interactive Web Graphics via 'plotly.js' |
| plotlyGeoAssets | Render 'Plotly' Maps without an Internet Connection |
| plotMCMC | MCMC Diagnostic Plots |
| plotMElm | Plot Marginal Effects from Linear Models |
| plotmm | Tidy Tools for Visualizing Mixture Models |
| plotmo | Plot a Model's Residuals, Response, and Partial Dependence Plots |
| plotor | Produces an Odds Ratio Plot from a Logistic Regression Model |
| plotpc | Plot Principal Component Histograms Around a Scatter Plot |
| PlotPrjNetworks | Useful Networking Tools for Project Management |
| plotprotein | Development of Visualization Tools for Protein Sequence |
| plotrix | Various Plotting Functions |
| plotROC | Generate Useful ROC Curve Charts for Print and Interactive Use |
| plotscale | Scale Graphics Devices Using Plot Dimensions |
| plotscaper | Explore Your Data with Interactive Figures |
| plotSEMM | Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models |
| plotthis | High-Level Plotting Built Upon 'ggplot2' and Other Plotting Packages |
| PlotTools | Add Continuous Legends to Plots |
| plotwidgets | Spider Plots, ROC Curves, Pie Charts and More for Use in Other Plots |
| plpoisson | Prediction Limits for Poisson Distribution |
| PLreg | Power Logit Regression for Modeling Bounded Data |
| PLRModels | Statistical Inference in Partial Linear Regression Models |
| pls | Partial Least Squares and Principal Component Regression |
| plsdepot | Partial Least Squares (PLS) Data Analysis Methods |
| plsdof | Degrees of Freedom and Statistical Inference for Partial Least Squares Regression |
| plsgenomics | PLS Analyses for Genomics |
| PLSiMCpp | Methods for Partial Linear Single Index Model |
| plsmmLasso | Variable Selection and Inference for Partial Semiparametric Linear Mixed-Effects Model |
| plsmod | Model Wrappers for Projection Methods |
| plsmselect | Linear and Smooth Predictor Modelling with Penalisation and Variable Selection |
| plspm | Partial Least Squares Path Modeling (PLS-PM) |
| plsRbeta | Partial Least Squares Regression for Beta Regression Models |
| plsRcox | Partial Least Squares Regression for Cox Models and Related Techniques |
| plsRglm | Partial Least Squares Regression for Generalized Linear Models |
| plsVarSel | Variable Selection in Partial Least Squares |
| pltesim | Simulate Probabilistic Long-Term Effects in Models with Temporal Dependence |
| plu | Dynamically Pluralize Phrases |
| plugdensity | Plug-in Kernel Density Estimation |
| plumber | An API Generator for R |
| plumberDeploy | Plumber Deployment |
| plumbertableau | Turn 'Plumber' APIs into 'Tableau' Extensions |
| plumbr | Mutable and Dynamic Data Models |
| plume | A Simple Author Handler for Scientific Writing |
| pluscode | Encoder for Google 'Pluscodes' |
| plusCode2 | Coordinates to 'Plus Code' Conversion Tool |
| plutor | Useful Functions for Visualization |
| plyr | Tools for Splitting, Applying and Combining Data |
| pm3 | Propensity Score Matching for Unordered 3-Group Data |
| PMA | Penalized Multivariate Analysis |
| PMAPscore | Identify Prognosis-Related Pathways Altered by Somatic Mutation |
| pmartR | Panomics Marketplace - Quality Control and Statistical Analysis for Panomics Data |
| pmc | Phylogenetic Monte Carlo |
| pmcalibration | Calibration Curves for Clinical Prediction Models |
| pmclust | Parallel Model-Based Clustering using Expectation-Gathering-Maximization Algorithm for Finite Mixture Gaussian Model |
| PMCMR | Calculate Pairwise Multiple Comparisons of Mean Rank Sums |
| PMCMRplus | Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended |
| pmd | Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted Analysis and Reactomics Analysis |
| pMEM | Predictive Moran's Eigenvector Maps |
| pmetar | Processing METAR Weather Reports |
| pmev | Calculates Earned Value for a Project Schedule |
| PMEvapotranspiration | Calculation of the Penman-Monteith Evapotranspiration using Weather Variables |
| pmhtutorial | Minimal Working Examples for Particle Metropolis-Hastings |
| pmledecon | Deconvolution Density Estimation using Penalized MLE |
| pmml | Generate PMML for Various Models |
| pmmlTransformations | Transforms Input Data from a PMML Perspective |
| pmparser | Create and Maintain a Relational Database of Data from PubMed/MEDLINE |
| pmr | Probability Models for Ranking Data |
| pmsampsize | Sample Size for Development of a Prediction Model |
| pmultinom | One-Sided Multinomial Probabilities |
| pmvalsampsize | Sample Size for External Validation of a Prediction Model |
| pmwg | Particle Metropolis Within Gibbs |
| PMwR | Portfolio Management with R |
| pmxcode | Create Pharmacometric Models |
| pmxcv | Integration-Based Coefficients of Variance |
| pmxpartab | Parameter Tables for PMx Analyses |
| pmxTools | Pharmacometric and Pharmacokinetic Toolkit |
| PNADcIBGE | Downloading, Reading and Analyzing PNADC Microdata |
| PNAR | Poisson Network Autoregressive Models |
| PNDSIBGE | Downloading, Reading and Analyzing PNDS Microdata - Package in Development |
| png | Read and write PNG images |
| PNSIBGE | Downloading, Reading and Analyzing PNS Microdata |
| PNWColors | Color Palettes Inspired by Nature in the US Pacific Northwest |
| PoA | Finds the Price of Anarchy for Routing Games |
| pocketapi | Wrapper Around the 'Pocket' API |
| POCRE | Penalized Orthogonal-Components Regression |
| pocrm | Dose Finding in Drug Combination Phase I Trials Using PO-CRM |
| POD | Probability of Detection for Qualitative PCR Methods |
| PoDBAY | Vaccine Efficacy Estimation Package |
| podcleaner | Legacy Scottish Post Office Directories Cleaner |
| PODES | Village Potential Statistics of Indonesia |
| poems | Pattern-Oriented Ensemble Modeling System |
| POET | Principal Orthogonal ComplEment Thresholding (POET) Method |
| pogit | Bayesian Variable Selection for a Poisson-Logistic Model |
| PogromcyDanych | DataCrunchers (PogromcyDanych) is the Massive Online Open Course that Brings R and Statistics to the People |
| poibin | The Poisson Binomial Distribution |
| PoiClaClu | Classification and Clustering of Sequencing Data Based on a Poisson Model |
| poilog | Poisson Lognormal and Bivariate Poisson Lognormal Distribution |
| POINT | Protein Structure Guided Local Test |
| pointblank | Data Validation and Organization of Metadata for Local and Remote Tables |
| pointdensityP | Point Density for Geospatial Data |
| PointedSDMs | Fit Models Derived from Point Processes to Species Distributions using 'inlabru' |
| PointFore | Interpretation of Point Forecasts as State-Dependent Quantiles and Expectiles |
| pointr | Working Comfortably with Pointers and Shortcuts to R Objects |
| pointRes | Analyzing Pointer Years and Components of Resilience |
| PoisBinNonNor | Data Generation with Poisson, Binary and Continuous Components |
| poisbinom | A Faster Implementation of the Poisson-Binomial Distribution |
| PoisBinOrd | Data Generation with Poisson, Binary and Ordinal Components |
| PoisBinOrdNonNor | Generation of Up to Four Different Types of Variables |
| PoisBinOrdNor | Data Generation with Poisson, Binary, Ordinal and Normal Components |
| poisDoubleSamp | Confidence Intervals with Poisson Double Sampling |
| poisFErobust | Poisson Fixed Effects Robust |
| poismf | Factorization of Sparse Counts Matrices Through Poisson Likelihood |
| PoisNonNor | Simultaneous Generation of Count and Continuous Data |
| PoisNor | Simultaneous Generation of Multivariate Data with Poisson and Normal Marginals |
| poisson.glm.mix | Fit High Dimensional Mixtures of Poisson GLMs |
| PoissonBinomial | Efficient Computation of Ordinary and Generalized Poisson Binomial Distributions |
| poissoned | Poisson Disk Sampling in 2D and 3D |
| PoissonMultinomial | The Poisson-Multinomial Distribution |
| PoissonPCA | Poisson-Noise Corrected PCA |
| poissonreg | Model Wrappers for Poisson Regression |
| poistweedie | Poisson-Tweedie Exponential Family Models |
| pokemon | Pokemon Data in English and Brazilian Portuguese |
| PolarCAP | Access the Polarization in Comparative Attitudes Project |
| polaroid | Create Hex Stickers with 'shiny' |
| poLCA | Polytomous Variable Latent Class Analysis |
| poldis | Analyse Political Texts |
| PolicyPortfolios | Tools for Managing, Measuring and Visualizing Policy Portfolios |
| policytree | Policy Learning via Doubly Robust Empirical Welfare Maximization over Trees |
| polimetrics | R Tools for Political Measures |
| poliscidata | Datasets and Functions Featured in Pollock and Edwards, an R Companion to Essentials of Political Analysis, Second Edition |
| polished | Authentication and Hosting for 'shiny' Apps |
| polite | Be Nice on the Web |
| politeness | Detecting Politeness Features in Text |
| politicsR | Calculating Political System Metrics |
| polle | Policy Learning |
| pollen | Analysis of Aerobiological Data |
| pollimetry | Estimate Pollinator Body Size and Co-Varying Ecological Traits |
| pollster | Calculate Crosstab and Topline Tables of Weighted Survey Data |
| polmineR | Verbs and Nouns for Corpus Analysis |
| polspline | Polynomial Spline Routines |
| Poly4AT | Access 'INVEKOS' API for Field Polygons |
| polyaAeppli | Implementation of the Polya-Aeppli Distribution |
| polyapost | Simulating from the Polya Posterior |
| Polychrome | Qualitative Palettes with Many Colors |
| polyclip | Polygon Clipping |
| polycor | Polychoric and Polyserial Correlations |
| PolycrossDesigns | Polycross Designs ("PolycrossDesigns") |
| polyCub | Cubature over Polygonal Domains |
| polyglotr | Translate Text |
| PolyHaplotyper | Assignment of Haplotypes Based on SNP Dosages in Diploids and Polyploids |
| polyhedralCubature | Multiple Integration over Convex Polyhedra |
| polylabelr | Find the Pole of Inaccessibility (Visual Center) of a Polygon |
| polymapR | Linkage Analysis in Outcrossing Polyploids |
| polyMatrix | Infrastructure for Manipulation Polynomial Matrices |
| polynom | A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations |
| PolynomF | Polynomials in R |
| PolyPatEx | Paternity Exclusion in Autopolyploid Species |
| polypharmacy | Calculate Several Polypharmacy Indicators |
| polypoly | Helper Functions for Orthogonal Polynomials |
| polyqtlR | QTL Analysis in Autopolyploid Bi-Parental F1 Populations |
| polyRAD | Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids |
| polyreg | Polynomial Regression |
| polysat | Tools for Polyploid Microsatellite Analysis |
| polySegratio | Simulate and Test Marker Dosage for Dominant Markers in Autopolyploids |
| polySegratioMM | Bayesian Mixture Models for Marker Dosage in Autopolyploids |
| PolyTree | Estimate Causal Polytree from Data |
| PolyTrend | Trend Classification Algorithm |
| polywog | Bootstrapped Basis Regression with Oracle Model Selection |
| POMADE | Power for Meta-Analysis of Dependent Effects |
| POMaSPU | Adaptive Association Tests for Multiple Phenotypes using Proportional Odds Model (POM-aSPU) |
| pomcheckr | Graphical Check for Proportional Odds Assumption |
| pomdp | Infrastructure for Partially Observable Markov Decision Processes (POMDP) |
| pomdpSolve | Interface to 'pomdp-solve' for Partially Observable Markov Decision Processes |
| Pomic | Pattern Oriented Modelling Information Criterion |
| pomodoro | Predictive Power of Linear and Tree Modeling |
| pomp | Statistical Inference for Partially Observed Markov Processes |
| pompom | Person-Oriented Method and Perturbation on the Model |
| pompp | Presence-Only for Marked Point Process |
| POMS | Phylogenetic Organization of Metagenomic Signals |
| pooh | Partial Orders and Relations |
| pool | Object Pooling |
| poolABC | Approximate Bayesian Computation with Pooled Sequencing Data |
| PoolBal | Balancing Central and Marginal Rejection of Pooled p-Values |
| PoolDilutionR | Calculate Gross Biogeochemical Flux Rates from Isotope Pool Dilution Data |
| PooledCohort | Predicted Risk for CVD using Pooled Cohort Equations, PREVENT Equations, and Other Contemporary CVD Risk Calculators |
| PooledMeanGroup | Pooled Mean Group Estimation of Dynamic Heterogenous Panels |
| pooledpeaks | Genetic Analysis of Pooled Samples |
| poolfstat | Computing f-Statistics and Building Admixture Graphs Based on Allele Count or Pool-Seq Read Count Data |
| poolHelper | Simulates Pooled Sequencing Genetic Data |
| pooling | Fit Poolwise Regression Models |
| poolr | Methods for Pooling P-Values from (Dependent) Tests |
| PoolTestR | Prevalence and Regression for Pool-Tested (Group-Tested) Data |
| poolVIM | Gene-Based Association Tests using the Actual Impurity Reduction (AIR) Variable Importance |
| poorman | A Poor Man's Dependency Free Recreation of 'dplyr' |
| pop | A Flexible Syntax for Population Dynamic Modelling |
| pop.lion | Models for Simulating Lion Populations |
| pop.wolf | Models for Simulating Wolf Populations |
| popbayes | Bayesian Model to Estimate Population Trends from Counts Series |
| popbio | Construction and Analysis of Matrix Population Models |
| popdemo | Demographic Modelling Using Projection Matrices |
| PoPdesign | Posterior Predictive (PoP) Design for Phase I Clinical Trials |
| PopED | Population (and Individual) Optimal Experimental Design |
| popEpi | Functions for Epidemiological Analysis using Population Data |
| PopGenHelpR | Streamline Population Genomic and Genetic Analyses |
| popgenr | Accompaniment to Population Genetics with R: An Introduction for Life Scientists |
| PopGenReport | A Simple Framework to Analyse Population and Landscape Genetic Data |
| POPInf | Assumption-Lean and Data-Adaptive Post-Prediction Inference |
| popkin | Estimate Kinship and FST under Arbitrary Population Structure |
| popPCR | Classify Digital PCR Droplets by Fitting Fluorescence Populations |
| poppr | Genetic Analysis of Populations with Mixed Reproduction |
| popPyramid | Population Pyramids |
| popReconstruct | Reconstruct Human Populations of the Recent Past |
| popstudy | Applied Techniques to Demographic and Time Series Analysis |
| poptrend | Estimate Smooth and Linear Trends from Population Count Survey Data |
| population | Models for Simulating Populations |
| PopulationGrowthR | Linear Population Growth Scenarios |
| populationPDXdesign | Designing Population PDX Studies |
| populR | Population Downscaling Using Areal Interpolation |
| poputils | Demographic Analysis and Data Manipulation |
| PopVar | Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation |
| porridge | Ridge-Type Penalized Estimation of a Potpourri of Models |
| port4me | Get the Same, Personal, Free 'TCP' Port over and over |
| PortalHacienda | Acceder Con R a Los Datos Del Portal De Hacienda |
| portalr | Create Useful Summaries of the Portal Data |
| portes | Portmanteau Tests for Time Series Models |
| portfolio | Analysing Equity Portfolios |
| portfolio.optimization | Contemporary Portfolio Optimization |
| PortfolioAnalytics | Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios |
| portfolioBacktest | Automated Backtesting of Portfolios over Multiple Datasets |
| PortfolioOptim | Small/Large Sample Portfolio Optimization |
| portion | Extracting a Data Portion |
| portn | Portfolio Analysis for Nature |
| PortRisk | Portfolio Risk Analysis |
| portsort | Factor-Based Portfolio Sorts |
| portvine | Vine Based (Un)Conditional Portfolio Risk Measure Estimation |
| poset | Analysis of Partially Ordered Data |
| POSetR | Partially Ordered Sets in R |
| PoSI | Valid Post-Selection Inference for Linear LS Regression |
| PoSIAdjRSquared | Post-Selection Inference for Adjusted R Squared |
| posologyr | Individual Dose Optimization using Population Pharmacokinetics |
| PosRatioDist | Quotient of Random Variables Conditioned to the Positive Quadrant |
| POSSA | Power Simulation for Sequential Analyses and Multiple Hypotheses |
| postcards | Create Beautiful, Simple Personal Websites |
| PostcodesioR | API Wrapper Around 'Postcodes.io' |
| postdoc | Minimal and Uncluttered Package Documentation |
| posterdown | Generate PDF Conference Posters Using R Markdown |
| posterior | Tools for Working with Posterior Distributions |
| PosteriorBootstrap | Non-Parametric Sampling with Parallel Monte Carlo |
| postGGIR | Data Processing after Running 'GGIR' for Accelerometer Data |
| postHoc | Tools for Post-Hoc Analysis |
| postinfectious | Estimating the Incubation Period Distribution of Post-Infectious Syndrome |
| postlightmercury | Parses Web Pages using Postlight Mercury |
| postlogic | Infix and Postfix Logic Operators |
| POSTm | Phylogeny-Guided OTU-Specific Association Test for Microbiome Data |
| postpack | Utilities for Processing Posterior Samples Stored in 'mcmc.lists' |
| POT | Generalized Pareto Distribution and Peaks Over Threshold |
| potential | Implementation of the Potential Model |
| poth | Precision of Treatment Hierarchy (POTH) |
| potions | Easy Options Management |
| potools | Tools for Internationalization and Portability in R Packages |
| potts | Markov Chain Monte Carlo for Potts Models |
| PottsUtils | Utility Functions of the Potts Models |
| pould | Phased or Unphased Linkage Disequilibrium |
| POUMM | The Phylogenetic Ornstein-Uhlenbeck Mixed Model |
| POV | Partition of Variation Variance Component Analysis Method |
| povmap | Extension to the 'emdi' Package |
| pow.int | Binary Exponentiation |
| powdist | Power and Reversal Power Distributions |
| powdR | Full Pattern Summation of X-Ray Powder Diffraction Data |
| power.transform | Location and Scale Invariant Power Transformations |
| Power2Stage | Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies |
| poweRbal | Phylogenetic Tree Models and the Power of Tree Shape Statistics |
| powerbiR | An Interface to the 'Power BI REST APIs' |
| powerbydesign | Power Estimates for ANOVA Designs |
| powerCompRisk | Power Analysis Tool for Joint Testing Hazards with Competing Risks Data |
| powerEQTL | Power and Sample Size Calculation for Bulk Tissue and Single-Cell eQTL Analysis |
| PoweREST | A Bootstrap-Based Power Estimation Tool for Spatial Transcriptomics |
| powerGWASinteraction | Power Calculations for GxE and GxG Interactions for GWAS |
| powerindexR | Measuring the Power in Voting Systems |
| powerjoin | Extensions of 'dplyr' and 'fuzzyjoin' Join Functions |
| powerLATE | Generalized Power Analysis for LATE |
| poweRlaw | Analysis of Heavy Tailed Distributions |
| powerly | Sample Size Analysis for Psychological Networks and More |
| powerMediation | Power/Sample Size Calculation for Mediation Analysis |
| powerNLSEM | Simulation-Based Power Estimation (MSPE) for Nonlinear SEM |
| PowerNormal | Power Normal Distribution |
| powerpkg | Power Analyses for the Affected Sib Pair and the TDT Design |
| powerPLS | Power Analysis for PLS Classification |
| PowerSDI | Calculate Standardised Drought Indices Using NASA POWER Data |
| powerSurvEpi | Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies |
| powertools | Power and Sample Size Tools |
| PowerTOST | Power and Sample Size for (Bio)Equivalence Studies |
| PowerUpR | Power Analysis Tools for Multilevel Randomized Experiments |
| powRICLPM | Perform Power Analysis for the RI-CLPM and STARTS Model |
| PP | Person Parameter Estimation |
| PPbigdata | Projection Pursuit for Big Data Based on Data Nuggets |
| pPCA | Partial Principal Component Analysis of Partitioned Large Sparse Matrices |
| ppcc | Probability Plot Correlation Coefficient Test |
| PPCDT | An Optimal Subset Selection for Distributed Hypothesis Testing |
| PPCI | Projection Pursuit for Cluster Identification |
| ppclust | Probabilistic and Possibilistic Cluster Analysis |
| ppcor | Partial and Semi-Partial (Part) Correlation |
| ppcSpatial | Spatial Analysis of Pakistan Population Census |
| ppdiag | Diagnosis and Visualizations Tools for Temporal Point Processes |
| ppendemic | A Glimpse at the Diversity of Peru's Endemic Plants |
| PPforest | Projection Pursuit Classification Forest |
| ppgam | Generalised Additive Point Process Models |
| ppgm | PaleoPhyloGeographic Modeling of Climate Niches and Species Distributions |
| ppgmmga | Projection Pursuit Based on Gaussian Mixtures and Evolutionary Algorithms |
| ppitables | Lookup Tables to Generate Poverty Likelihoods and Rates using the Poverty Probability Index (PPI) |
| PPLasso | Prognostic Predictive Lasso for Biomarker Selection |
| ppmf | Read Census Privacy Protected Microdata Files |
| ppmHR | Privacy-Protecting Hazard Ratio Estimation in Distributed Data Networks |
| PPMiss | Copula-Based Estimator for Long-Range Dependent Processes under Missing Data |
| ppmlasso | Point Process Models with LASSO-Type Penalties |
| PPMR | Probabilistic Two Sample Mendelian Randomization |
| ppmSuite | A Collection of Models that Employ Product Partition Distributions as a Prior on Partitions |
| PPQplan | Process Performance Qualification (PPQ) Plans in Chemistry, Manufacturing and Controls (CMC) Statistical Analysis |
| ppRank | Classification of Algorithms |
| ppRep | Analysis of Replication Studies using Power Priors |
| PPRL | Privacy Preserving Record Linkage |
| pps | PPS Sampling |
| ppsbm | Clustering in Longitudinal Networks |
| ppseq | Design Clinical Trials using Sequential Predictive Probability Monitoring |
| PPSFS | Partial Profile Score Feature Selection in High-Dimensional Generalized Linear Interaction Models |
| ppsr | Predictive Power Score |
| PPTcirc | Projected Polya Tree for Circular Data |
| PPtreeregViz | Projection Pursuit Regression Tree Visualization |
| PPtreeViz | Projection Pursuit Classification Tree Visualization |
| pqantimalarials | web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa |
| pql | A Partitioned Quasi-Likelihood for Distributed Statistical Inference |
| PQLseq | Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies |
| pqrBayes | Bayesian Penalized Quantile Regression |
| pqrfe | Penalized Quantile Regression with Fixed Effects |
| PRA | Project Risk Analysis |
| praatpicture | 'Praat Picture' Style Plots of Acoustic Data |
| prabclus | Functions for Clustering and Testing of Presence-Absence, Abundance and Multilocus Genetic Data |
| pracma | Practical Numerical Math Functions |
| pracpac | Practical 'R' Packaging in 'Docker' |
| PracticalEquiDesign | Design of Practical Equivalence Trials |
| practicalSigni | Practical Significance Ranking of Regressors and Exact t Density |
| PracTools | Designing and Weighting Survey Samples |
| prais | Prais-Winsten Estimator for AR(1) Serial Correlation |
| praise | Praise Users |
| PRANA | Pseudo-Value Regression Approach for Network Analysis (PRANA) |
| praznik | Tools for Information-Based Feature Selection and Scoring |
| prcbench | Testing Workbench for Precision-Recall Curves |
| prclust | Penalized Regression-Based Clustering Method |
| prcr | Person-Centered Analysis |
| PRDA | Conduct a Prospective or Retrospective Design Analysis |
| pre | Prediction Rule Ensembles |
| PRECAST | Embedding and Clustering with Alignment for Spatial Datasets |
| precintcon | Precipitation Intensity, Concentration and Anomaly Analysis |
| pRecipe | Precipitation R Recipes |
| precisely | Estimate Sample Size Based on Precision Rather than Power |
| precisePlacement | Suite of Functions to Help Get Plot Elements Exactly Where You Want Them |
| PreciseSums | Accurate Floating Point Sums and Products |
| precmed | Precision Medicine |
| precommit | Pre-Commit Hooks |
| precondition | Lightweight Precondition, Postcondition, and Sanity Checks |
| precrec | Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) Curves |
| PredCRG | Computational Prediction of Proteins Encoded by Circadian Genes |
| predfairness | Discrimination Mitigation for Machine Learning Models |
| predhy | Genomic Prediction of Hybrid Performance |
| predhy.GUI | Genomic Prediction of Hybrid Performance with Graphical User Interface |
| predict3d | Draw Three Dimensional Predict Plot Using Package 'rgl' |
| PredictABEL | Assessment of Risk Prediction Models |
| prediction | Tidy, Type-Safe 'prediction()' Methods |
| predictionInterval | Prediction Interval Functions for Assessing Replication Study Results |
| PredictionR | Prediction for Future Data from any Continuous Distribution |
| predictMe | Visualize Individual Prediction Performance |
| predictmeans | Predicted Means for Linear and Semiparametric Models |
| predictNMB | Evaluate Clinical Prediction Models by Net Monetary Benefit |
| predictoR | Predictive Data Analysis System |
| PredictorSelect | Out-of-Sample Predictability in Predictive Regressions with Many Predictor Candidates |
| predictrace | Predict the Race and Gender of a Given Name Using Census and Social Security Administration Data |
| predicts | Spatial Prediction Tools |
| predieval | Assessing Performance of Prediction Models for Predicting Patient-Level Treatment Benefit |
| predint | Prediction Intervals |
| predkmeans | Covariate Adaptive Clustering |
| PredPsych | Predictive Approaches in Psychology |
| predReliability | Estimates Reliability of Individual Supervised Learning Predictions |
| predRupdate | Prediction Model Validation and Updating |
| PredTest | Preparing Data For, and Calculating the Prediction Test |
| predtools | Prediction Model Tools |
| predtoolsTS | Time Series Prediction Tools |
| pref | Preference Voting with Explanatory Graphics |
| prefeR | R Package for Pairwise Preference Elicitation |
| preference | 2-Stage Preference Trial Design and Analysis |
| prefio | Structures for Preference Data |
| prefmod | Utilities to Fit Paired Comparison Models for Preferences |
| PreKnitPostHTMLRender | Pre-Knitting Processing and Post HTML-Rendering Processing |
| PReMiuM | Dirichlet Process Bayesian Clustering, Profile Regression |
| prenoms | Names Given to Babies in Quebec Between 1980 and 2020 |
| prepdat | Preparing Experimental Data for Statistical Analysis |
| pRepDesigns | Partially Replicated (p-Rep) Designs |
| prepplot | Prepare Figure Region for Base Graphics |
| PreProcess | Basic Functions for Pre-Processing Microarrays |
| PreProcessing | Various Preprocessing Transformations of Numeric Data Matrices |
| PreProcessRecordLinkage | Preprocessing Record Linkage |
| PREPShiny | Interactive Document for Preprocessing the Dataset |
| preputils | Utilities for Preparation of Data Analysis |
| prereg | R Markdown Templates to Preregister Scientific Studies |
| preregr | Specify (Pre)Registrations and Export Them Human- And Machine-Readably |
| PresenceAbsence | Presence-Absence Model Evaluation |
| presens | Interface for PreSens Fiber Optic Data |
| presenter | Present Data with Style |
| presentes | Registry of Victims of State Terrorism in Argentina |
| preseqR | Predicting Species Accumulation Curves |
| PResiduals | Probability-Scale Residuals and Residual Correlations |
| presize | Precision Based Sample Size Calculation |
| presmTP | Methods for Transition Probabilities |
| PressPurt | Indeterminacy of Networks via Press Perturbations |
| pressuRe | Imports, Processes, and Visualizes Biomechanical Pressure Data |
| pretest | A Novel Approach to Predictive Accuracy Testing in Nested Environments |
| prettifyAddins | 'RStudio' Addins to Prettify 'JavaScript', 'C++', 'Python', and More |
| prettyB | Pretty Base Graphics |
| prettycode | Pretty Print R Code in the Terminal |
| PrettyCols | Pretty Colour Palettes |
| prettydoc | Creating Pretty Documents from R Markdown |
| prettyglm | Pretty Summaries of Generalized Linear Model Coefficients |
| prettyGraphs | Publication-Quality Graphics |
| prettymapr | Scale Bar, North Arrow, and Pretty Margins in R |
| prettyR | Pretty Descriptive Stats |
| prettyunits | Pretty, Human Readable Formatting of Quantities |
| prevalence | Tools for Prevalence Assessment Studies |
| prevederer | Wrapper for the 'Prevedere' API |
| preventr | An Implementation of the AHA PREVENT Equations |
| previsionio | 'Prevision.io' R SDK |
| PrevMap | Geostatistical Modelling of Spatially Referenced Prevalence Data |
| prevR | Estimating Regional Trends of a Prevalence from a DHS and Similar Surveys |
| prevtoinc | Prevalence to Incidence Calculations for Point-Prevalence Studies in a Nosocomial Setting |
| pRF | Permutation Significance for Random Forests |
| PriceIndices | Calculating Bilateral and Multilateral Price Indexes |
| pricelevels | Spatial Price Level Comparisons |
| priceR | Economics and Pricing Tools |
| pricesensitivitymeter | Van Westendorp Price Sensitivity Meter Analysis |
| prim | Patient Rule Induction Method (PRIM) |
| PRIMAL | Parametric Simplex Method for Sparse Learning |
| primarycensored | Primary Event Censored Distributions |
| primate | Tools and Methods for Primatological Data Science |
| primefactr | Use Prime Factorization for Computations |
| primePCA | Projected Refinement for Imputation of Missing Entries in PCA |
| PRIMEplus | Study Design for Immunotherapy Clinical Trials |
| primer | Functions and Data for the Book, a Primer of Ecology with R |
| primerTree | Visually Assessing the Specificity and Informativeness of Primer Pairs |
| primes | Fast Functions for Prime Numbers |
| PRIMME | Eigenvalues and Singular Values and Vectors from Large Matrices |
| princurve | Fit a Principal Curve in Arbitrary Dimension |
| PrInDT | Prediction and Interpretation in Decision Trees for Classification and Regression |
| printr | Automatically Print R Objects to Appropriate Formats According to the 'knitr' Output Format |
| prinvars | Principal Variables |
| prioGene | Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information |
| prior3D | 3D Prioritization Algorithm |
| priorCON | Graph Community Detection Methods into Systematic Conservation Planning |
| PriorGen | Generates Prior Distributions for Proportions |
| prioriactions | Multi-Action Conservation Planning |
| prioritizr | Systematic Conservation Prioritization in R |
| prioritizrdata | Conservation Planning Datasets |
| prioritylasso | Analyzing Multiple Omics Data with an Offset Approach |
| priorsense | Prior Diagnostics and Sensitivity Analysis |
| prism | Access Data from the Oregon State Prism Climate Project |
| PRISM.forecast | Penalized Regression with Inferred Seasonality Module - Forecasting Unemployment Initial Claims using 'Google Trends' Data |
| PRISMA | Protocol Inspection and State Machine Analysis |
| PRISMA2020 | Make Interactive 'PRISMA' Flow Diagrams |
| prismadiagramR | Creates a Prisma Diagram using 'DiagrammeR' |
| prismatic | Color Manipulation Tools |
| prismjs | Server-Side Syntax Highlighting |
| prisonbrief | Downloads and Parses World Prison Brief Data |
| prithulib | Perform Random Experiments |
| PrivateLR | Differentially Private Regularized Logistic Regression |
| PRNG | A Pseudo-Random Number Generator |
| prnsamplr | Permanent Random Number Sampling |
| pro | Point-Process Response Model for Optogenetics |
| ProAE | PRO-CTCAE Scoring, Analysis, and Graphical Tools |
| probably | Tools for Post-Processing Predicted Values |
| ProbBayes | Probability and Bayesian Modeling |
| ProbBreed | Probability Theory for Selecting Candidates in Plant Breeding |
| probe | Sparse High-Dimensional Linear Regression with PROBE |
| ProbeDeveloper | Develop Hybridization Probes |
| ProbitSpatial | Probit with Spatial Dependence, SAR, SEM and SARAR Models |
| ProbMarg | Computing Logit & Probit Predicted Probabilities & Marginal Effects |
| probout | Unsupervised Multivariate Outlier Probabilities for Large Datasets |
| probs | Elementary Probability on Finite Sample Spaces |
| ProbSamplingI | Probabilistic Sampling Design and Strategies |
| PROBShiny | Interactive Document for Working with Basic Probability |
| probstats4econ | Companion Package to Probability and Statistics for Economics and Business |
| ProbYX | Inference for the Stress-Strength Model R = P(Y<X) |
| pROC | Display and Analyze ROC Curves |
| proccalibrad | Extraction of Bands from MODIS Calibrated Radiances MOD02 NRT |
| ProcData | Process Data Analysis |
| proceduralnames | Several Methods for Procedural Name Generation |
| processanimateR | Process Map Token Replay Animation |
| processcheckR | Rule-Based Conformance Checking of Business Process Event Data |
| processmapR | Construct Process Maps Using Event Data |
| processmonitR | Building Process Monitoring Dashboards |
| processpredictR | Process Prediction |
| processx | Execute and Control System Processes |
| proclhmm | Latent Hidden Markov Models for Response Process Data |
| procmaps | Portable Address Space Mapping |
| ProcMod | Informative Procrustean Matrix Correlation |
| procs | Recreates Some 'SAS®' Procedures in 'R' |
| ProDenICA | Product Density Estimation for ICA using Tilted Gaussian Density Estimates |
| prodest | Production Function Estimation |
| prodigenr | Research Project Directory Generator |
| prodlim | Product-Limit Estimation for Censored Event History Analysis |
| productivity | Indices of Productivity Using Data Envelopment Analysis (DEA) |
| productplots | Product Plots for R |
| ProFAST | Probabilistic Factor Analysis for Spatially-Aware Dimension Reduction |
| ProfessR | Grades Setting and Exam Maker |
| profExtrema | Compute and Visualize Profile Extrema Functions |
| proffer | Profile R Code and Visualize with 'Pprof' |
| profile | Read, Manipulate, and Write Profiler Data |
| ProfileLikelihood | Profile Likelihood for a Parameter in Commonly Used Statistical Models |
| profileModel | Profiling Inference Functions for Various Model Classes |
| profileR | Profile Analysis of Multivariate Data in R |
| profiplots | Profinit Plotting Theme |
| profmem | Simple Memory Profiling for R |
| profoc | Probabilistic Forecast Combination Using CRPS Learning |
| ProfoundData | Downloading and Exploring Data from the PROFOUND Database |
| profr | An Alternative Display for Profiling Information |
| profrep | Profile Repeatability |
| proftools | Profile Output Processing Tools for R |
| profvis | Interactive Visualizations for Profiling R Code |
| progenyClust | Finding the Optimal Cluster Number Using Progeny Clustering |
| ProgModule | Identification of Prognosis-Related Mutually Exclusive Modules |
| progress | Terminal Progress Bars |
| progressr | An Inclusive, Unifying API for Progress Updates |
| PROJ | Generic Coordinate System Transformations Using 'PROJ' |
| proj4 | A simple interface to the PROJ.4 cartographic projections library |
| ProjectionBasedClustering | Projection Based Clustering |
| projections | Project Future Case Incidence |
| ProjectManagement | Management of Deterministic and Stochastic Projects |
| projects | A Project Infrastructure for Researchers |
| ProjectTemplate | Automates the Creation of New Statistical Analysis Projects |
| projmgr | Task Tracking and Project Management with GitHub |
| projpred | Projection Predictive Feature Selection |
| ProliferativeIndex | Calculates and Analyzes the Proliferative Index |
| prolific.api | A User-Friendly Interface for Accessing the Prolific API |
| prolsirm | Procrustes Matching for Latent Space Item Response Model |
| prome | Patient-Reported Outcome Data Analysis with Stan |
| PROMETHEE | Preference Ranking Organization METHod for Enrichment of Evaluations |
| promethee123 | PROMETHEE I, II, and III Methods |
| PrometheeTools | PROMETHEE and GLNF for Ranking and Sorting Problems |
| promises | Abstractions for Promise-Based Asynchronous Programming |
| promor | Proteomics Data Analysis and Modeling Tools |
| promote | Client for the 'Alteryx Promote' API |
| promotionImpact | Analysis & Measurement of Promotion Effectiveness |
| prompt | Dynamic 'R' Prompt |
| prompter | Add Tooltips in 'Shiny' Apps with 'Hint.css' |
| promptr | Format and Complete Few-Shot LLM Prompts |
| promr | Prometheus 'PromQL' Query Client for 'R' |
| prop.comb.RR | Analyzing Combination of Proportions and Relative Risk |
| propagate | Propagation of Uncertainty |
| PropCIs | Various Confidence Interval Methods for Proportions |
| PropClust | Propensity Clustering and Decomposition |
| properties | Parse 'Java' Properties Files for 'R Service Bus' Applications |
| prophet | Automatic Forecasting Procedure |
| proporz | Proportional Apportionment |
| propOverlap | Feature (gene) selection based on the Proportional Overlapping Scores |
| PropScrRand | Propensity Score Methods for Assigning Treatment in Randomized Trials |
| proPubBills | 'ProPublica' U.S. Congress Bills API Wrapper |
| ProPublicaR | Access Functions for ProPublica's APIs |
| PROreg | Patient Reported Outcomes Regression Analysis |
| PROscorer | Functions to Score Commonly-Used Patient-Reported Outcome (PRO) Measures and Other Psychometric Instruments |
| PROscorerTools | Tools to Score Patient-Reported Outcome (PRO) and Other Psychometric Measures |
| PROsetta | Linking Patient-Reported Outcomes Measures |
| ProSGPV | Penalized Regression with Second-Generation P-Values |
| prospectr | Miscellaneous Functions for Processing and Sample Selection of Spectroscopic Data |
| PROSPER | Simulation of Weed Population Dynamics |
| ProSportsDraftData | Professional Sports Draft Data |
| protag | Search Tagged Peptides & Draw Highlighted Mass Spectra |
| protein8k | Perform Analysis and Create Visualizations of Proteins |
| ProteoBayes | Bayesian Statistical Tools for Quantitative Proteomics |
| proteomicsCV | Calculates the Percentage CV for Mass Spectrometry-Based Proteomics Data |
| proteus | Multiform Seq2Seq Model for Time-Feature Analysis |
| protHMM | Protein Feature Extraction from Profile Hidden Markov Models |
| proto | Prototype Object-Based Programming |
| protoclust | Hierarchical Clustering with Prototypes |
| protolite | Highly Optimized Protocol Buffer Serializers |
| proton | The Proton Game |
| protoshiny | Interactive Dendrograms for Visualizing Hierarchical Clusters with Prototypes |
| prototest | Inference on Prototypes from Clusters of Features |
| protr | Generating Various Numerical Representation Schemes for Protein Sequences |
| ProTrackR | Manipulate and Play 'ProTracker' Modules |
| ProTrackR2 | Manipulate and Play 'ProTracker' Modules |
| protti | Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools |
| protViz | Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics |
| proustr | Tools for Natural Language Processing in French |
| provDebugR | A Time-Travelling Debugger |
| provenance | Statistical Toolbox for Sedimentary Provenance Analysis |
| proverbs | Print a Daily Bible Proverb to Console |
| provExplainR | Compare Provenance Collections to Explain Changed Script Outputs |
| provGraphR | Creates Adjacency Matrices for Lineage Searches |
| provParseR | Pulls Information from Prov.Json Files |
| provSummarizeR | Summarizes Provenance Related to Inputs and Outputs of a Script or Console Commands |
| provTraceR | Uses Provenance to Trace File Lineage for One or more R Scripts |
| provViz | Provenance Visualizer |
| proxirr | Alpha and Beta Proximity to Irreplaceability |
| proxy | Distance and Similarity Measures |
| proxyC | Computes Proximity in Large Sparse Matrices |
| prozor | Minimal Protein Set Explaining Peptide Spectrum Matches |
| PRP | Bayesian Prior and Posterior Predictive Replication Assessment |
| prqlr | R Bindings for the 'prqlc' Rust Library |
| prrd | Parallel Runs of Reverse Depends |
| PRROC | Precision-Recall and ROC Curves for Weighted and Unweighted Data |
| PRSim | Stochastic Simulation of Streamflow Time Series using Phase Randomization |
| PRSPGx | Construct PGx PRS |
| pRSR | Test of Periodicity using Response Surface Regression |
| prt | Tabular Data Backed by Partitioned 'fst' Files |
| PRTree | Probabilistic Regression Trees |
| prWarp | Warping Landmark Configurations |
| pryr | Tools for Computing on the Language |
| Przewodnik | Datasets and Functions Used in the Book 'Przewodnik po Pakiecie R' |
| ps | List, Query, Manipulate System Processes |
| PSAboot | Bootstrapping for Propensity Score Analysis |
| PSAgraphics | Propensity Score Analysis Graphics |
| PSAWR | 'Pushshift' API Wrapper for 'Reddit' Submission and Comment Search |
| psBayesborrow | Bayesian Information Borrowing with Propensity Score Matching |
| psbcGroup | Penalized Parametric and Semiparametric Bayesian Survival Models with Shrinkage and Grouping Priors |
| psbcSpeedUp | Penalized Semiparametric Bayesian Cox Models |
| psborrow | Bayesian Dynamic Borrowing with Propensity Score |
| psborrow2 | Bayesian Dynamic Borrowing Analysis and Simulation |
| psc | Personalised Synthetic Controls |
| PSCBS | Analysis of Parent-Specific DNA Copy Numbers |
| pscl | Political Science Computational Laboratory |
| pscore | Standardizing Physiological Composite Risk Endpoints |
| PScr | Estimation for the Power Series Cure Rate Model |
| psd | Adaptive, Sine-Multitaper Power Spectral Density and Cross Spectrum Estimation |
| psData | Download Regularly Maintained Political Science Data Sets |
| PSDistr | Distributions Derived from Normal Distribution |
| psdr | Use Time Series to Generate and Compare Power Spectral Density |
| pseudo | Computes Pseudo-Observations for Modeling |
| pseudobibeR | Aggregate Counts of Linguistic Features |
| pseudohouseholds | Generate Pseudohouseholds on Road Networks in Regions |
| pseval | Methods for Evaluating Principal Surrogates of Treatment Response |
| PSF | Forecasting of Univariate Time Series Using the Pattern Sequence-Based Forecasting (PSF) Algorithm |
| psfmi | Prediction Model Pooling, Selection and Performance Evaluation Across Multiply Imputed Datasets |
| PSGD | Projected Subset Gradient Descent |
| PSGoft | Modified Lilliefors Goodness-of-Fit Normality Test |
| psgp | Projected Spatial Gaussian Process Methods |
| psica | Decision Tree Analysis for Probabilistic Subgroup Identification with Multiple Treatments |
| psidR | Build Panel Data Sets from PSID Raw Data |
| psidread | Streamline Building Panel Data from Panel Study of Income Dynamics ('PSID') Raw Files |
| PSIM | Preference Selection Index Method (PSIM) |
| PSIndependenceTest | Independence Tests for Two-Way, Three-Way and Four-Way Contingency Tables |
| PSinference | Inference for Released Plug-in Sampling Single Synthetic Dataset |
| PSLM2015 | Pakistan Social and Living Standards Measurement Survey 2014-15 |
| psm3mkv | Evaluate Partitioned Survival and State Transition Models |
| psmineR | Performance Spectrum Miner for Event Data |
| pso | Particle Swarm Optimization |
| psoptim | Particle Swarm Optimization |
| psp | Parameter Space Partitioning MCMC for Global Model Evaluation |
| pspatreg | Spatial and Spatio-Temporal Semiparametric Regression Models with Spatial Lags |
| pspearman | Spearman's Rank Correlation Test |
| pspline | Penalized Smoothing Splines |
| PSPManalysis | Analysis of Physiologically Structured Population Models |
| psqn | Partially Separable Quasi-Newton |
| PSS.Health | Power and Sample Size for Health Researchers via Shiny |
| PSSIM | Test of Independence & Image Structural Similarity Measure PSSIM |
| PSSMCOOL | Features Extracted from Position Specific Scoring Matrix (PSSM) |
| pssmooth | Flexible and Efficient Evaluation of Principal Surrogates/Treatment Effect Modifiers |
| psSubpathway | Flexible Identification of Phenotype-Specific Subpathways |
| PST | Probabilistic Suffix Trees and Variable Length Markov Chains |
| Pstat | Assessing Pst Statistics |
| pstest | Specification Tests for Parametric Propensity Score Models |
| PStrata | Principal Stratification Analysis in R |
| psvd | Eigendecomposition, Singular-Values and the Power Method |
| psvmSDR | Unified Principal Sufficient Dimension Reduction Package |
| PSW | Propensity Score Weighting Methods for Dichotomous Treatments |
| PSweight | Propensity Score Weighting for Causal Inference with Observational Studies and Randomized Trials |
| psy | Various Procedures Used in Psychometrics |
| psycCleaning | Data Cleaning for Psychological Analyses |
| psych | Procedures for Psychological, Psychometric, and Personality Research |
| psychmeta | Psychometric Meta-Analysis Toolkit |
| psycho | Efficient and Publishing-Oriented Workflow for Psychological Science |
| psychometric | Applied Psychometric Theory |
| psychomix | Psychometric Mixture Models |
| psychonetrics | Structural Equation Modeling and Confirmatory Network Analysis |
| psychotools | Psychometric Modeling Infrastructure |
| psychotree | Recursive Partitioning Based on Psychometric Models |
| psychReport | Reproducible Reports in Psychology |
| psychrolib | Psychrometric Properties of Moist and Dry Air |
| psychTools | Tools to Accompany the 'psych' Package for Psychological Research |
| PsychWordVec | Word Embedding Research Framework for Psychological Science |
| psycModel | Integrated Toolkit for Psychological Analysis and Modeling in R |
| PsyControl | CUSUM Person Fit Statistics |
| psymetadata | Open Datasets from Meta-Analyses in Psychology Research |
| psyntur | Helper Tools for Teaching Statistical Data Analysis |
| psyphy | Functions for Analyzing Psychophysical Data in R |
| psyverse | Decentralized Unequivocality in Psychological Science |
| ptable | Generation of Perturbation Tables for the Cell-Key Method |
| PTAk | Principal Tensor Analysis on k Modes |
| PTE | Personalized Treatment Evaluator |
| PTERP | PTE and RP for Optimally-Transformed Surrogate |
| ptinpoly | Point-in-Polyhedron Test (2D and 3D) |
| pTITAN2 | Permutations of Treatment Labels and TITAN2 Analysis |
| ptm | Analyses of Protein Post-Translational Modifications |
| ptmixed | Poisson-Tweedie Generalized Linear Mixed Model |
| ptools | Tools for Poisson Data |
| PtProcess | Time Dependent Point Process Modelling |
| ptspotter | Helper Functions for Use with "ProjectTemplate" |
| PTSR | Positive Time Series Regression |
| pttstability | Particle-Takens Stability |
| ptvapi | Access the 'Public Transport Victoria' Timetable API |
| ptw | Parametric Time Warping |
| ptwikiwords | Words Used in Portuguese Wikipedia |
| PTwins | Percentile Estimation of Fetal Weight for Twins by Chorionicity |
| PTXQC | Quality Report Generation for MaxQuant and mzTab Results |
| ptycho | Bayesian Variable Selection with Hierarchical Priors |
| PubChemR | Interface to the 'PubChem' Database for Chemical Data Retrieval |
| pubh | A Toolbox for Public Health and Epidemiology |
| public.ctn0094data | De-Identified Data from CTN-0094 |
| public.ctn0094extra | Helper Files for the CTN-0094 Relational Database |
| PublicationBias | Sensitivity Analysis for Publication Bias in Meta-Analyses |
| PublicWorksFinanceIT | Soil Defense Investments in Italy: Data Retrieval, Analysis, Visualization |
| publipha | Bayesian Meta-Analysis with Publications Bias and P-Hacking |
| Publish | Format Output of Various Routines in a Suitable Way for Reports and Publication |
| pubmed.mineR | Text Mining of PubMed Abstracts |
| PubMedMining | Text-Mining of the 'PubMed' Repository |
| pubmedR | Gathering Metadata About Publications, Grants, Clinical Trials from 'PubMed' Database |
| pubmedtk | 'Pubmed' Toolkit |
| PubMedWordcloud | 'Pubmed' Word Clouds |
| pubtatordb | Create and Query a Local 'PubTator' Database |
| PUGMM | Parsimonious Ultrametric Gaussian Mixture Models |
| PUlasso | High-Dimensional Variable Selection with Presence-Only Data |
| pullword | R Interface to Pullword Service |
| puls | Partitioning Using Local Subregions |
| pulsar | Parallel Utilities for Lambda Selection along a Regularization Path |
| pumilioR | Pumilio in R |
| PUMP | Power Under Multiplicity Project |
| puniform | Meta-Analysis Methods Correcting for Publication Bias |
| PUPAK | Parameter Estimation, and Plot Visualization of Adsorption Kinetic Models |
| PupillometryR | A Unified Pipeline for Pupillometry Data |
| PupilPre | Preprocessing Pupil Size Data |
| PUPMCR | Image-Based Identification of Color Based on Rayner (1970) Terminology and Known Fungal Pigments |
| PUPMSI | Moisture Sorption Isotherm Modeling Program |
| puremoe | Pubmed Unified REtrieval for Multi-Output Exploration |
| pureseqtmr | Predict Transmembrane Protein Topology |
| purge | Purge Training Data from Models |
| purgeR | Inbreeding-Purging Estimation in Pedigreed Populations |
| purging | Simple Method for Purging Mediation Effects among Independent Variables |
| PurpleAir | Query the 'PurpleAir' Application Programming Interface |
| purrr | Functional Programming Tools |
| purrrlyr | Tools at the Intersection of 'purrr' and 'dplyr' |
| Pursuit | Projection Pursuit |
| pushbar | Create Sliders for 'Shiny' |
| pushoverr | Send Push Notifications using 'Pushover' |
| puzzle | Assembling Data Sets for Non-Linear Mixed Effects Modeling |
| PVAClone | Population Viability Analysis with Data Cloning |
| pvaluefunctions | Creates and Plots P-Value Functions, S-Value Functions, Confidence Distributions and Confidence Densities |
| pvar | Calculation and Application of p-Variation |
| pvclass | P-Values for Classification |
| pvclust | Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling |
| pvcurveanalysis | Analysis of Pressure Volume Curves |
| pvda | Disproportionality Functions for Pharmacovigilance |
| pvldcurve | Simplifies the Analysis of Pressure Volume and Leaf Drying Curves |
| pvLRT | Likelihood Ratio Test-Based Approaches to Pharmacovigilance |
| PVplr | Performance Loss Rate Analysis Pipeline |
| PVR | Phylogenetic Eigenvectors Regression and Phylogentic Signal-Representation Curve |
| PvSTATEM | Reading, Quality Control and Preprocessing of MBA (Multiplex Bead Assay) Data |
| PWEALL | Design and Monitoring of Survival Trials Accounting for Complex Situations |
| PWEV | PSO Based Weighted Ensemble Algorithm for Volatility Modelling |
| PWEXP | Piecewise Exponential Distribution Prediction Model |
| PWIR | Provides a Function to Calculate Prize Winner Indices Based on Bibliometric Data |
| pwlmm | PWIGLS for Two-Level Multivariate and Multilevel Linear Models |
| pwr | Basic Functions for Power Analysis |
| pwr2 | Power and Sample Size Analysis for One-way and Two-way ANOVA Models |
| pwr2ppl | Power Analyses for Common Designs (Power to the People) |
| pwr4exp | Power Analysis for Research Experiments |
| pwrAB | Power Analysis for AB Testing |
| PwrGSD | Power in a Group Sequential Design |
| pwrRasch | Statistical Power Simulation for Testing the Rasch Model |
| pwrss | Statistical Power and Sample Size Calculation Tools |
| pwt | Penn World Table (Versions 5.6, 6.x, 7.x) |
| pwt10 | Penn World Table (Version 10.x) |
| pwt8 | Penn World Table (Version 8.x) |
| pwt9 | Penn World Table (Version 9.x) |
| pxR | PC-Axis with R |
| pxweb | R Interface to PXWEB APIs |
| PxWebApiData | PX-Web Data by API |
| pycno | Pycnophylactic Interpolation |
| pyinit | Pena-Yohai Initial Estimator for Robust S-Regression |
| pylintR | Lint 'Python' Files with a R Command or a 'RStudio' Addin |
| pyMTurkR | A Client for the 'MTurk' Requester API |
| pyramid | Draw Population Pyramid |
| pysd2r | API to 'Python' Library 'pysd' |
| pysparklyr | Provides a 'PySpark' Back-End for the 'sparklyr' Package |
| PytrendsLongitudinalR | Create Longitudinal Google Trends Data |
| pzfx | Read and Write 'GraphPad Prism' Files |
| Q2q | Interpolating Age-Specific Mortality Rates at All Ages |
| Q7 | Types and Features for Object Oriented Programming |
| qacBase | Functions to Facilitate Exploratory Data Analysis |
| qad | Quantification of Asymmetric Dependence |
| QAIG | Automatic Item Generator for Quantitative Multiple-Choice Items |
| qap | Heuristics for the Quadratic Assignment Problem (QAP) |
| qape | Quantile of Absolute Prediction Errors |
| Qapprox | Approximation to the Survival Functions of Quadratic Forms of Gaussian Variables |
| qbld | Quantile Regression for Binary Longitudinal Data |
| QBMS | Query the Breeding Management System(s) |
| qboxplot | Quantile-Based Boxplot |
| qbr | Access the 'Quickbase' JSON API |
| QCA | Qualitative Comparative Analysis |
| QCAcluster | Tools for the Analysis of Clustered Data in QCA |
| qcapower | Estimate Power and Required Sample Size in QCA |
| QCApro | Advanced Functionality for Performing and Evaluating Qualitative Comparative Analysis |
| QCAtools | Helper Functions for QCA in R |
| qcauchyreg | Quantile Regression Quasi-Cauchy |
| qCBA | Postprocessing of Rule Classification Models Learnt on Quantized Data |
| qcc | Quality Control Charts |
| qccrs | Quality Control Charts under Repetitive Sampling |
| QCEWAS | Fast and Easy Quality Control of EWAS Results Files |
| QCGWAS | Quality Control of Genome Wide Association Study Results |
| qch | Query Composite Hypotheses |
| qcpm | Quantile Composite Path Modeling |
| qcQpcr | Histone ChIP-Seq qPCR Analyzer |
| qcr | Quality Control Review |
| QCSimulator | A 5-Qubit Quantum Computing Simulator |
| QCSIS | Sure Independence Screening via Quantile Correlation and Composite Quantile Correlation |
| qcv | Quantifying Construct Validity |
| qdap | Bridging the Gap Between Qualitative Data and Quantitative Analysis |
| qdapDictionaries | Dictionaries and Word Lists for the 'qdap' Package |
| qdapRegex | Regular Expression Removal, Extraction, and Replacement Tools |
| qdapTools | Tools for the 'qdap' Package |
| QDComparison | Modern Nonparametric Tools for Two-Sample Quantile and Distribution Comparisons |
| QDiabetes | Type 2 Diabetes Risk Calculator |
| qdm | Fitting a Quadrilateral Dissimilarity Model to Same-Different Judgments |
| qeML | Quick and Easy Machine Learning Tools |
| Qest | Quantile-Based Estimator |
| QF | Density, Cumulative and Quantile Functions of Quadratic Forms |
| qfa | Quantile-Frequency Analysis (QFA) of Time Series |
| QFASA | Quantitative Fatty Acid Signature Analysis |
| qfasar | Quantitative Fatty Acid Signature Analysis in R |
| qfratio | Moments and Distributions of Ratios of Quadratic Forms Using Recursion |
| QFRM | Pricing of Vanilla and Exotic Option Contracts |
| QGA | Quantum Genetic Algorithm |
| qgam | Smooth Additive Quantile Regression Models |
| QGameTheory | Quantum Game Theory Simulator |
| qGaussian | The q-Gaussian Distribution |
| qgcomp | Quantile G-Computation |
| qgcompint | Quantile G-Computation Extensions for Effect Measure Modification |
| qgg | Statistical Tools for Quantitative Genetic Analyses |
| QGglmm | Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models |
| qgisprocess | Use 'QGIS' Processing Algorithms |
| qgraph | Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation |
| qgshiny | A 'shiny' Application for Active Learning Instruction in Introductory Quantitative Genetics |
| QHOT | QTL Hotspot Detection |
| QHScrnomo | Construct Nomograms for Competing Risks Regression Models |
| QI | Quantity-Intensity Relationship of Soil Potassium |
| qicharts | Quality Improvement Charts |
| qicharts2 | Quality Improvement Charts |
| qif | Quadratic Inference Function |
| qiitr | R Interface to Qiita API |
| Qindex | Continuous and Dichotomized Index Predictors Based on Distribution Quantiles |
| Qindex.data | Data for Package 'Qindex' |
| qkerntool | Q-Kernel-Based and Conditionally Negative Definite Kernel-Based Machine Learning Tools |
| qlcal | R Bindings to the Calendaring Functionality of 'QuantLib' |
| qlcData | Processing Data for Quantitative Language Comparison |
| qlcMatrix | Utility Sparse Matrix Functions for Quantitative Language Comparison |
| qlcVisualize | Visualization for Quantitative Language Comparison |
| QLearning | Reinforcement Learning using the Q Learning Algorithm |
| qlifetable | Managing and Building of Quarterly Life Tables |
| qmap | Statistical Transformations for Post-Processing Climate Model Output |
| qmd | Quantification of Multivariate Dependence |
| qmethod | Analysis of Subjective Perspectives Using Q Methodology |
| qMRI | Methods for Quantitative Magnetic Resonance Imaging ('qMRI') |
| qmrparser | Parser Combinator in R |
| qmvs | Queueing Model of Visual Search |
| qoi | Read and Write QOI Images |
| QoLMiss | Scales Score Calculation from Quality of Life Data |
| qpcR | Modelling and Analysis of Real-Time PCR Data |
| qPCRhelper | qPCR Ct Values to Expression Values |
| qPCRtools | Tools for qPCR |
| qpdf | Split, Combine and Compress PDF Files |
| qpmadr | Interface to the 'qpmad' Quadratic Programming Solver |
| qpNCA | Noncompartmental Pharmacokinetic Analysis by qPharmetra |
| qqboxplot | Implementation of the Q-Q Boxplot |
| qqconf | Creates Simultaneous Testing Bands for QQ-Plots |
| qqman | Q-Q and Manhattan Plots for GWAS Data |
| qqplotr | Quantile-Quantile Plot Extensions for 'ggplot2' |
| qqtest | Self Calibrating Quantile-Quantile Plots for Visual Testing |
| qqvases | Animated Normal Quantile-Quantile Plots |
| QR | QR Factorization without Pivoting |
| qra | Quantal Response Analysis for Dose-Mortality Data |
| QRAGadget | A 'Shiny' Gadget for Interactive 'QRA' Visualizations |
| QRank | A Novel Quantile Regression Approach for eQTL Discovery |
| qrcm | Quantile Regression Coefficients Modeling |
| qrcmNP | Nonlinear and Penalized Quantile Regression Coefficients Modeling |
| qrcode | Generate QRcodes with R |
| QregBB | Block Bootstrap Methods for Quantile Regression in Time Series |
| QRegVCM | Quantile Regression in Varying-Coefficient Models |
| qrencoder | Quick Response Code (QR Code) / Matrix Barcode Creator |
| qreport | Statistical Reporting with 'Quarto' |
| QRIpkg | Quantile Regression Index Score |
| qris | Quantile Regression Model for Residual Lifetime Using an Induced Smoothing Approach |
| QRISK3 | 10-Year Cardiovascular Disease Risk Calculator (QRISK3 2017) |
| qrjoint | Joint Estimation in Linear Quantile Regression |
| qrlabelr | Generate Machine- And Human-Readable Plot Labels for Experiments |
| qrLMM | Quantile Regression for Linear Mixed-Effects Models |
| QRM | Provides R-Language Code to Examine Quantitative Risk Management Concepts |
| qrmdata | Data Sets for Quantitative Risk Management Practice |
| qrmix | Quantile Regression Mixture Models |
| qrmtools | Tools for Quantitative Risk Management |
| qrng | (Randomized) Quasi-Random Number Generators |
| qrNLMM | Quantile Regression for Nonlinear Mixed-Effects Models |
| qrnn | Quantile Regression Neural Network |
| qs | Quick Serialization of R Objects |
| qs2 | Efficient Serialization of R Objects |
| QSARdata | Quantitative Structure Activity Relationship (QSAR) Data Sets |
| qsimulatR | A Quantum Computer Simulator |
| qslice | Implementations of Various Slice Samplers |
| qsort | Scoring Q-Sort Data |
| qsplines | Quaternions Splines |
| qspray | Multivariate Polynomials with Rational Coefficients |
| qst | Store Tables in SQL Database |
| qsub | Running Commands Remotely on 'Gridengine' Clusters |
| qte | Quantile Treatment Effects |
| QTE.RD | Quantile Treatment Effects under the Regression Discontinuity Design |
| qtkit | Quantitative Text Kit |
| qtl | Tools for Analyzing QTL Experiments |
| QTL.gCIMapping | QTL Genome-Wide Composite Interval Mapping |
| QTL.gCIMapping.GUI | QTL Genome-Wide Composite Interval Mapping with Graphical User Interface |
| qtl2 | Quantitative Trait Locus Mapping in Experimental Crosses |
| qtl2convert | Convert Data among QTL Mapping Packages |
| qtl2fst | Database Storage of Genotype Probabilities for QTL Mapping |
| qtl2ggplot | Data Visualization for QTL Experiments |
| qtl2pattern | Pattern Support for 'qtl2' Package |
| qtl2pleio | Testing Pleiotropy in Multiparental Populations |
| qtlbook | Datasets for the R/qtl Book |
| qtlc | Densitometric Analysis of Thin-Layer Chromatography Plates |
| qtlcharts | Interactive Graphics for QTL Experiments |
| qtlDesign | Design of QTL (Quantitative Trait Locus) Experiments |
| QTLEMM | QTL Mapping and Hotspots Detection |
| qtlhot | Inference for QTL Hotspots |
| qtlnet | Causal Inference of QTL Networks |
| qtlpoly | Random-Effect Multiple QTL Mapping in Autopolyploids |
| QTLRel | Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees |
| QTOCen | Quantile-Optimal Treatment Regimes with Censored Data |
| Qtools | Utilities for Quantiles |
| qtwAcademic | 'Quarto' Website Templates for Academics |
| quadcleanR | Cleanup and Visualization of Quadrat Data |
| quadform | Efficient Evaluation of Quadratic Forms |
| quadmatrix | Solving Quadratic Matrix Equations |
| quadmesh | Quadrangle Mesh |
| quadprog | Functions to Solve Quadratic Programming Problems |
| quadprogXT | Quadratic Programming with Absolute Value Constraints |
| quadraticSD | Visualizing the SD using a Quadratic Curve |
| QuadratiK | Collection of Methods Constructed using Kernel-Based Quadratic Distances |
| QuadRoot | Quadratic Root for any Quadratic Equation |
| quadrupen | Sparsity by Worst-Case Quadratic Penalties |
| quadtree | Region Quadtrees for Spatial Data |
| qualitycontrol | Unified Framework for Data Quality Control |
| qualmap | Opinionated Approach for Digitizing Semi-Structured Qualitative GIS Data |
| qualpalr | Automatic Generation of Qualitative Color Palettes |
| qualtRics | Download 'Qualtrics' Survey Data |
| qualV | Qualitative Validation Methods |
| qualvar | Implements Indices of Qualitative Variation Proposed by Wilcox (1973) |
| QUALYPSO | Partitioning Uncertainty Components of an Incomplete Ensemble of Climate Projections |
| Quandl | API Wrapper for Quandl.com |
| QuantBondCurves | Calculates Bond Values and Interest Rate Curves for Finance |
| quantCurves | Estimate Quantiles Curves |
| quantdates | Manipulate Dates for Finance |
| quantdr | Dimension Reduction Techniques for Conditional Quantiles |
| quanteda | Quantitative Analysis of Textual Data |
| quanteda.textmodels | Scaling Models and Classifiers for Textual Data |
| quanteda.textplots | Plots for the Quantitative Analysis of Textual Data |
| quanteda.textstats | Textual Statistics for the Quantitative Analysis of Textual Data |
| quantification | Quantification of Qualitative Survey Data |
| quantileDA | Quantile Classifier |
| QuantileGH | Quantile Least Mahalanobis Distance Estimator for Tukey g-&-h Mixture |
| QuantileGradeR | Quantile-Adjusted Restaurant Grading |
| QuantileNPCI | Nonparametric Confidence Intervals for Quantiles |
| quantilogram | Cross-Quantilogram |
| quantities | Quantity Calculus for R Vectors |
| quantkriging | Quantile Kriging for Stochastic Simulations with Replication |
| quantmod | Quantitative Financial Modelling Framework |
| QuantNorm | Mitigating the Adverse Impact of Batch Effects in Sample Pattern Detection |
| quantoptr | Algorithms for Quantile- And Mean-Optimal Treatment Regimes |
| QuantPsyc | Quantitative Psychology Tools |
| quantreg | Quantile Regression |
| quantreg.nonpar | Nonparametric Series Quantile Regression |
| quantregForest | Quantile Regression Forests |
| QuantRegGLasso | Adaptively Weighted Group Lasso for Semiparametric Quantile Regression Models |
| quantregGrowth | Non-Crossing Additive Regression Quantiles and Non-Parametric Growth Charts |
| quantregRanger | Quantile Regression Forests for 'ranger' |
| quantspec | Quantile-Based Spectral Analysis of Time Series |
| QuantumOps | Performs Common Linear Algebra Operations Used in Quantum Computing and Implements Quantum Algorithms |
| quarks | Simple Methods for Calculating and Backtesting Value at Risk and Expected Shortfall |
| quarrint | Interaction Prediction Between Groundwater and Quarry Extension Using Discrete Choice Models and Artificial Neural Networks |
| Quartet | Comparison of Phylogenetic Trees Using Quartet and Split Measures |
| quartets | Datasets to Help Teach Statistics |
| quarto | R Interface to 'Quarto' Markdown Publishing System |
| quaxnat | Estimation of Natural Regeneration Potential |
| QuClu | Quantile-Based Clustering Algorithms |
| queryBuilder | Programmatic Way to Construct Complex Filtering Queries |
| queryparser | Translate 'SQL' Queries into 'R' Expressions |
| queryup | Query the 'UniProtKB' REST API |
| quest | Prepare Questionnaire Data for Analysis |
| questionr | Functions to Make Surveys Processing Easier |
| QuESTr | Constructing Quantitative Environment Sensor using Transcriptomes |
| queuecomputer | Computationally Efficient Queue Simulation |
| queueing | Analysis of Queueing Networks and Models |
| quickblock | Quick Threshold Blocking |
| quickcheck | Property Based Testing |
| quickcode | Quick and Essential 'R' Tricks for Better Scripts |
| QuickJSR | Interface for the 'QuickJS' Lightweight 'JavaScript' Engine |
| quickmatch | Quick Generalized Full Matching |
| quickNmix | Asymptotic N-Mixture Model Fitting |
| quickPlot | A System of Plotting Optimized for Speed and Modularity |
| quickpsy | Fits Psychometric Functions for Multiple Groups |
| quickPWCR | Quickly construct and rating large binary pairwiesd comparisons |
| quickReg | Build Regression Models Quickly and Display the Results Using 'ggplot2' |
| quickregression | Quick Linear Regression |
| quicR | RT-QuIC Data Formatting and Analysis |
| QuICSeedR | Analyze Data for Fluorophore-Assisted Seed Amplification Assays |
| quid | Bayesian Mixed Models for Qualitative Individual Differences |
| quiddich | QUick IDentification of DIagnostic CHaracters |
| quietR | Simplify Output Verbosity |
| quiltr | Qualtrics for Labelling Text using R |
| quincunx | REST API Client for the 'PGS' Catalog |
| quint | Qualitative Interaction Trees |
| quollr | Visualising How Nonlinear Dimension Reduction Warps Your Data |
| quoradsR | Get 'Quora' Ads Data via the 'Windsor.ai' API |
| quotedargs | A Way of Writing Functions that Quote their Arguments |
| quRan | Complete Text of the Qur'an |
| QurvE | Robust and User-Friendly Analysis of Growth and Fluorescence Curves |
| Qval | The Q-Matrix Validation Methods Framework |
| qvcalc | Quasi Variances for Factor Effects in Statistical Models |
| qvirus | Quantum Computing for Analyzing CD4 Lymphocytes and Antiretroviral Therapy |
| qwalkr | Handle Continuous-Time Quantum Walks with R |
| QWDAP | Quantum Walk-Based Data Analysis and Prediction |
| qwraps2 | Quick Wraps 2 |
| QZ | Generalized Eigenvalues and QZ Decomposition |
| r.blip | Bayesian Network Learning Improved Project |
| R.cache | Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations |
| R.devices | Unified Handling of Graphics Devices |
| R.filesets | Easy Handling of and Access to Files Organized in Structured Directories |
| R.huge | Methods for Accessing Huge Amounts of Data [deprecated] |
| r.jive | Perform JIVE Decomposition for Multi-Source Data |
| R.matlab | Read and Write MAT Files and Call MATLAB from Within R |
| R.methodsS3 | S3 Methods Simplified |
| R.oo | R Object-Oriented Programming with or without References |
| r.proxy | Set Proxy in R Console |
| R.rsp | Dynamic Generation of Scientific Reports |
| R.temis | Integrated Text Mining Solution |
| R.utils | Various Programming Utilities |
| R0 | Estimation of R0 and Real-Time Reproduction Number from Epidemics |
| r02pro | R Programming: Zero to Pro |
| R1magic | Compressive Sampling: Sparse Signal Recovery Utilities |
| R2Addhaz | R2 Measure of Explained Variation under the Additive Hazards Model |
| R2admb | 'ADMB' to R Interface Functions |
| R2BayesX | Estimate Structured Additive Regression Models with 'BayesX' |
| R2BEAT | Multistage Sampling Allocation and Sample Selection |
| r2country | Country Data with Names, Capitals, Currencies, Populations, Time, Languages and so on |
| r2d2 | Bivariate (Two-Dimensional) Confidence Region and Frequency Distribution |
| r2d3 | Interface to 'D3' Visualizations |
| r2dictionary | A Mini-Dictionary for 'R', 'Shiny' and 'Rmarkdown' Documents |
| r2dii.analysis | Measure Climate Scenario Alignment of Corporate Loans |
| r2dii.data | Datasets to Measure the Alignment of Corporate Loan Books with Climate Goals |
| r2dii.match | Tools to Match Corporate Lending Portfolios with Climate Data |
| r2dii.plot | Visualize the Climate Scenario Alignment of a Financial Portfolio |
| R2DT | Translation of Base R-Like Functions for 'data.table' Objects |
| r2fireworks | Enhance Your 'Rmarkdown' and 'shiny' Apps with Dazzling Fireworks Celebrations |
| r2glmm | Computes R Squared for Mixed (Multilevel) Models |
| R2HTML | HTML Exportation for R Objects |
| R2jags | Using R to Run 'JAGS' |
| r2mlm | R-Squared Measures for Multilevel Models |
| R2MLwiN | Running 'MLwiN' from Within R |
| R2OpenBUGS | Running OpenBUGS from R |
| r2pmml | Convert R Models to PMML |
| R2PPT | Simple R Interface to Microsoft PowerPoint using RDCOMClient |
| r2pptx | Object Oriented R -> PowerPoint |
| r2r | R-Object to R-Object Hash Maps |
| r2redux | R2 Statistic |
| r2resize | In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents |
| R2ROC | AUC Statistics |
| r2rtf | Easily Create Production-Ready Rich Text Format (RTF) Table and Figure |
| R2sample | Various Methods for the Two Sample Problem |
| r2shortcode | Shorten Function Names of Functions in Another Package and Create an Index to Make Them Accessible |
| r2social | Seamless Integration of Sharing and Connect Buttons in Markdown and Apps |
| r2spss | Format R Output to Look Like SPSS |
| r2stl | Visualizing Data using a 3D Printer |
| r2sundials | Wrapper for 'SUNDIALS' Solving ODE and Sensitivity Problem |
| r2symbols | Symbols for 'Markdown' and 'Shiny' Application |
| R2ucare | Goodness-of-Fit Tests for Capture-Recapture Models |
| R2wd | Write MS-Word documents from R |
| R2WinBUGS | Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS' |
| r311 | Interface to the 'open311' Standard |
| r3dmol | Create Interactive 3D Visualizations of Molecular Data |
| r3js | 'WebGL'-Based 3D Plotting using the 'three.js' Library |
| r3PG | Simulating Forest Growth using the 3-PG Model |
| R3port | Report Functions to Create HTML and PDF Files |
| R4CouchDB | A R Convenience Layer for CouchDB 2.0 |
| r4ds.tutorials | Tutorials for "R for Data Science" |
| r4googleads | 'Google Ads API' Interface |
| R4HCR | R for Health Care Research |
| r4lineups | Statistical Inference on Lineup Fairness |
| r4ss | R Code for Stock Synthesis |
| r5r | Rapid Realistic Routing with 'R5' |
| R6 | Encapsulated Classes with Reference Semantics |
| R62S3 | Automatic Method Generation from R6 |
| R6causal | R6 Class for Structural Causal Models |
| R6DS | R6 Reference Class Based Data Structures |
| r6extended | Extension for 'R6' Base Class |
| r6methods | Make Methods for R6 Classes |
| R6P | Design Patterns in R |
| r6qualitytools | R6-Based Statistical Methods for Quality Science |
| ra4bayesmeta | Reference Analysis for Bayesian Meta-Analysis |
| rabi | Generate Codes to Uniquely and Robustly Identify Individuals for Animal Behavior Studies |
| RABR | Simulations for Response Adaptive Block Randomization Design |
| RAC | R Package for Aqua Culture |
| racademyocean | Client for 'AcademyOcean API' |
| RaceID | Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data |
| raceland | Pattern-Based Zoneless Method for Analysis and Visualization of Racial Topography |
| racir | Rapid A/Ci Response (RACiR) Data Analysis |
| Racmacs | Antigenic Cartography Macros |
| ractivecampaign | Loading Data from 'ActiveCampaign API v3' |
| rADA | Statistical Analysis and Cut-Point Determination of Immunoassays |
| radar | Fundamental Formulas for Radar |
| radarBoxplot | Implementation of the Radar-Boxplot |
| radarchart | Radar Chart from 'Chart.js' |
| RadData | Nuclear Decay Data for Dosimetric Calculations - ICRP 107 |
| RadEro | Cs-137 Conversion Model |
| RadialVisGadgets | Interactive Gadgets for Radial Visualization Approaches |
| radiant | Business Analytics using R and Shiny |
| radiant.basics | Basics Menu for Radiant: Business Analytics using R and Shiny |
| radiant.data | Data Menu for Radiant: Business Analytics using R and Shiny |
| radiant.design | Design Menu for Radiant: Business Analytics using R and Shiny |
| radiant.model | Model Menu for Radiant: Business Analytics using R and Shiny |
| radiant.multivariate | Multivariate Menu for Radiant: Business Analytics using R and Shiny |
| RadioSonde | Tools for Plotting Skew-T Diagrams and Wind Profiles |
| radir | Inverse-Regression Estimation of Radioactive Doses |
| radlibs | Build Your Own Madlibs! |
| RadOnc | Analytical Tools for Radiation Oncology |
| radous | Query Random User Data from the Random User Generator API |
| radsafer | Radiation Safety |
| RADstackshelpR | Optimize the De Novo Stacks Pipeline via R |
| Radviz | Project Multidimensional Data in 2D Space |
| RAdwords | Loading Google Adwords Data into R |
| raem | Analytic Element Modeling of Steady Single-Layer Groundwater Flow |
| rafalib | Convenience Functions for Routine Data Exploration |
| rafsi | Ranking of Alternatives with the RAFSI Method |
| Rage | Life History Metrics from Matrix Population Models |
| ragg | Graphic Devices Based on AGG |
| RagGrid | A Wrapper of the 'JavaScript' Library 'agGrid' |
| rags2ridges | Ridge Estimation of Precision Matrices from High-Dimensional Data |
| ragtop | Pricing Equity Derivatives with Extensions of Black-Scholes |
| rai | Revisiting-Alpha-Investing for Polynomial Regression |
| rainbow | Bagplots, Boxplots and Rainbow Plots for Functional Data |
| RAINBOWR | Genome-Wide Association Study with SNP-Set Methods |
| raincin | Ranking with Incomplete Information |
| rainette | The Reinert Method for Textual Data Clustering |
| RainfallErosivityFactor | The Rainfall-Runoff Erosivity Factor |
| rainfarmr | Stochastic Precipitation Downscaling with the RainFARM Method |
| rairtable | Efficient Wrapper for the 'Airtable' API |
| RaJIVE | Robust Angle Based Joint and Individual Variation Explained |
| rakeR | Easy Spatial Microsimulation (Raking) in R |
| ralger | Easy Web Scraping |
| RALSA | R Analyzer for Large-Scale Assessments |
| RamanMP | Analysis and Identification of Raman Spectra of Microplastics |
| Ramble | Parser Combinator for R |
| rAmCharts | JavaScript Charts Tool |
| rAmCharts4 | Interface to the JavaScript Library 'amCharts 4' |
| ramchoice | Revealed Preference and Attention Analysis in Random Limited Attention Models |
| RAMClustR | Mass Spectrometry Metabolomics Feature Clustering and Interpretation |
| ramcmc | Robust Adaptive Metropolis Algorithm |
| rameritrade | 'TD Ameritrade' API Interface for R |
| ramify | Additional Matrix Functionality |
| ramlegacy | Download and Read RAM Legacy Stock Assessment Database |
| RAMP | Regularized Generalized Linear Models with Interaction Effects |
| RAMpath | Structural Equation Modeling Using the Reticular Action Model (RAM) Notation |
| ramps | Bayesian Geostatistical Modeling with RAMPS |
| RaMS | R Access to Mass-Spec Data |
| ramsvm | Reinforced Angle-Based Multicategory Support Vector Machines |
| randChecks | Covariate Balance Checks: Randomization Tests and Graphical Diagnostics |
| randcorr | Generate a Random p x p Correlation Matrix |
| randgeo | Generate Random 'WKT' or 'GeoJSON' |
| RandMeta | Efficient Numerical Algorithm for Exact Inference in Meta Analysis |
| randnet | Random Network Model Estimation, Selection and Parameter Tuning |
| rando | Context Aware Random Numbers |
| random | True Random Numbers using RANDOM.ORG |
| random.cdisc.data | Create Random ADaM Datasets |
| random.polychor.pa | A Parallel Analysis with Polychoric Correlation Matrices |
| randomcoloR | Generate Attractive Random Colors |
| randomForest | Breiman and Cutlers Random Forests for Classification and Regression |
| randomForestExplainer | Explaining and Visualizing Random Forests in Terms of Variable Importance |
| RandomForestsGLS | Random Forests for Dependent Data |
| randomForestSRC | Fast Unified Random Forests for Survival, Regression, and Classification (RF-SRC) |
| randomForestVIP | Tune Random Forests Based on Variable Importance & Plot Results |
| randomGLM | Random General Linear Model Prediction |
| randomizationInference | Flexible Randomization-Based Inference |
| randomizeBE | Create a Random List for Crossover Studies |
| randomizeR | Randomization for Clinical Trials |
| randomizr | Easy-to-Use Tools for Common Forms of Random Assignment and Sampling |
| randomLCA | Random Effects Latent Class Analysis |
| randomMachines | An Ensemble Modeling using Random Machines |
| randomNames | Generate Random Given and Surnames |
| RandomProjectionTest | Two-Sample Test in High Dimensions using Random Projection |
| randomUniformForest | Random Uniform Forests for Classification, Regression and Unsupervised Learning |
| Randomuseragent | Filtering and Randomly Sampling Real User-Agent Strings |
| RandomWalker | Generate Random Walks Compatible with the 'tidyverse' |
| RandPro | Random Projection with Classification |
| randquotes | Get Random Quotes from Quotes on Design API |
| randtests | Testing Randomness in R |
| randtoolbox | Toolbox for Pseudo and Quasi Random Number Generation and Random Generator Tests |
| RandVar | Implementation of Random Variables |
| rang | Reconstructing Reproducible R Computational Environments |
| rangeBuilder | Occurrence Filtering, Geographic Standardization and Generation of Species Range Polygons |
| rangeMapper | A Platform for the Study of Macro-Ecology of Life History Traits |
| rangeModelMetadata | Provides Templates for Metadata Files Associated with Species Range Models |
| ranger | A Fast Implementation of Random Forests |
| RanglaPunjab | Displays Palette of 5 Colors |
| rank | Customisable Ranking of Numerical and Categorical Data |
| RankAggreg | Weighted Rank Aggregation |
| RankAggregator | Aggregation of (Partial) Ordinal Rankings |
| RankAggSIgFUR | Polynomially Bounded Rank Aggregation under Kemeny's Axiomatic Approach |
| Rankcluster | Model-Based Clustering for Multivariate Partial Ranking Data |
| rankCorr | Total, Between-, and Within-Cluster Spearman Rank Correlations for Clustered Data |
| rankdifferencetest | Kornbrot's Rank Difference Test |
| rankdist | Distance Based Ranking Models |
| rankFD | Rank-Based Tests for General Factorial Designs |
| rankhazard | Rank-Hazard Plots |
| rankICC | Rank Intraclass Correlation for Clustered Data |
| RankingProject | The Ranking Project: Visualizations for Comparing Populations |
| rankinma | Rank in Network Meta-Analysis |
| rankinPlot | Convenient Plotting for the Modified Rankin Scale and Other Ordinal Outcome Data |
| RankPCA | Rank of Variables Based on Principal Component Analysis for Mixed Data Types |
| rankrate | Joint Statistical Models for Preference Learning with Rankings and Ratings |
| RankResponse | Ranking Responses in a Single Response Question or a Multiple Response Question |
| RANKS | Ranking of Nodes with Kernelized Score Functions |
| ranktreeEnsemble | Ensemble Models of Rank-Based Trees with Extracted Decision Rules |
| RANN | Fast Nearest Neighbour Search (Wraps ANN Library) Using L2 Metric |
| Rapi | Interface for Multiple Data Providers 'EDDS' and 'FRED' |
| rapiclient | Dynamic OpenAPI/Swagger Client |
| RApiDatetime | R API for 'Date' and 'Datetime' |
| rapidjsonr | 'Rapidjson' C++ Header Files |
| rapidoc | Generates 'RapiDoc' Documentation from an 'OpenAPI' Specification |
| RapidoPGS | A Fast and Light Package to Compute Polygenic Risk Scores |
| rapidphylo | Rapidly Estimates Phylogeny from Large Allele Frequency Data Using Root Distances Method |
| RapidPolygonLookup | POLYGON LOOKUP USING KD TREES |
| rapidraker | Rapid Automatic Keyword Extraction (RAKE) Algorithm |
| rapidsplithalf | A Fast Split-Half Reliability Algorithm |
| rapidxmlr | 'Rapidxml' C++ Header Files |
| RApiSerialize | R API Serialization |
| Rapp | Easily Build Command Line Applications |
| RAppArmor | Bindings to AppArmor and Security Related Linux Tools |
| rappdirs | Application Directories: Determine Where to Save Data, Caches, and Logs |
| rapport | A Report Templating System |
| rapportools | Miscellaneous (Stats) Helper Functions with Sane Defaults for Reporting |
| rappsflyer | Work with AppsFlyer API |
| rapsimng | APSIM Next Generation |
| RAPTOR | Row and Position Tracheid Organizer |
| raptr | Representative and Adequate Prioritization Toolkit in R |
| raqs | Interface to the US EPA Air Quality System (AQS) API |
| RAQSAPI | A Simple Interface to the US EPA Air Quality System Data Mart API |
| Raquifer | Estimate the Water Influx into Hydrocarbon Reservoirs |
| rar | Risk-Adjusted Regression |
| rare | Linear Model with Tree-Based Lasso Regularization for Rare Features |
| RareComb | Combinatorial and Statistical Analyses of Rare Events |
| rareNMtests | Ecological and Biogeographical Null Model Tests for Comparing Rarefaction Curves |
| rarestR | Rarefaction-Based Species Richness Estimator |
| RARfreq | Response Adaptive Randomization with 'Frequentist' Approaches |
| Rarity | Calculation of Rarity Indices for Species and Assemblages of Species |
| rarms | Access Data from the USDA ARMS Data API |
| rARPACK | Solvers for Large Scale Eigenvalue and SVD Problems |
| RARtrials | Response-Adaptive Randomization in Clinical Trials |
| RaschSampler | Rasch Sampler |
| rasciidoc | Create Reports Using R and 'asciidoc' |
| rasclass | Supervised Raster Image Classification |
| RaSEn | Random Subspace Ensemble Classification and Variable Screening |
| rassta | Raster-Based Spatial Stratification Algorithms |
| raster | Geographic Data Analysis and Modeling |
| rasterbc | Access Forest Ecology Layers for British Columbia in 2001-2018 |
| rasterdiv | Diversity Indices for Numerical Matrices |
| rasterDT | Fast Raster Summary and Manipulation |
| rasterImage | An Improved Wrapper of image() |
| rasterize | Rasterize Graphical Output |
| rasterKernelEstimates | Kernel Based Estimates on in-Memory Raster Images |
| rasterList | A Raster Where Cells are Generic Objects |
| rasterpdf | Plot Raster Graphics in PDF Files |
| rasterpic | Convert Digital Images into 'SpatRaster' Objects |
| rasterVis | Visualization Methods for Raster Data |
| RAT | Research Assessment Tools |
| Rata | Automated Test Assembly |
| ratdat | Portal Project Teaching Database |
| ratelimitr | Rate Limiting for R |
| ratematrix | Bayesian Estimation of the Evolutionary Rate Matrix |
| rater | Statistical Models of Repeated Categorical Rating Data |
| rateratio.test | Exact Rate Ratio Test |
| raters | A Modification of Fleiss' Kappa in Case of Nominal and Ordinal Variables |
| ratesci | Confidence Intervals for Comparisons of Binomial or Poisson Rates |
| RATest | Randomization Tests |
| RAthena | Connect to 'AWS Athena' using 'Boto3' ('DBI' Interface) |
| RatingScaleReduction | Rating Scale Reduction Procedure |
| RationalExp | Rationalizing Rational Expectations. Tests and Deviations |
| rationalfun | Manipulation of Rational Functions |
| RationalMatrix | Exact Matrix Algebra for Rational Matrices |
| ratioOfQsprays | Fractions of Multivariate Polynomials with Rational Coefficients |
| ratios | Calculating Ratios Between Two Data Sets and Correction for Adhering Particles on Plants |
| ratlas | ATLAS Formatting Functions and Templates |
| rATTAINS | Access EPA 'ATTAINS' Data |
| rattle | Graphical User Interface for Data Science in R |
| Ravages | Rare Variant Analysis and Genetic Simulations |
| ravelRy | An Interface to the 'Ravelry' API |
| raven.rdf | An R Interface for Raven DataFrames (Beta0) |
| RavenR | Raven Hydrological Modelling Framework R Support and Analysis |
| rAverage | Parameter Estimation for the Averaging Model of Information Integration Theory |
| ravetools | Signal and Image Processing Toolbox for Analyzing Intracranial Electroencephalography Data |
| raw | R Actuarial Workshops |
| RawHummus | Raw Data Quality Control Tool for LC-MS System |
| rawKS | Easily Get True-Positive Rate and False-Positive Rate and KS Statistic |
| raws.profile | Managing Profiles on Amazon Web Service |
| rayimage | Image Processing for Simulated Cameras |
| raymolecule | Parse and Render Molecular Structures in 3D |
| rayrender | Build and Raytrace 3D Scenes |
| rayshader | Create Maps and Visualize Data in 2D and 3D |
| raytracing | Rossby Wave Ray Tracing |
| rayvertex | 3D Software Rasterizer |
| rbacon | Age-Depth Modelling using Bayesian Statistics |
| rBahadur | Assortative Mating Simulation and Multivariate Bernoulli Variates |
| RBaseX | 'BaseX' Client |
| rBayesianOptimization | Bayesian Optimization of Hyperparameters |
| rbbnp | A Bias Bound Approach to Non-Parametric Inference |
| rbc | Regression by Composition |
| rbcb | R Interface to Brazilian Central Bank Web Services |
| rbcc | Risk-Based Control Charts |
| rbch | Extraction and Analysis of Data from the Bitcoin Cash (BCH) Blockchain |
| rBDAT | Implementation of BDAT Tree Taper Fortran Functions |
| RBE3 | Estimation and Additional Tools for Quantile Generalized Beta Regression Model |
| Rbeast | Bayesian Change-Point Detection and Time Series Decomposition |
| rbedrock | Analysis and Manipulation of Data from Minecraft Bedrock Edition |
| rbenchmark | Benchmarking routine for R |
| Rbent | Robust Bent Line Regression |
| RBesT | R Bayesian Evidence Synthesis Tools |
| rBeta2009 | The Beta Random Number and Dirichlet Random Vector Generating Functions |
| RBF | Robust Backfitting |
| rbgm | Tools for 'Box Geometry Model' (BGM) Files and Topology for the Atlantis Ecosystem Model |
| rbi | Interface to 'LibBi' |
| rbi.helpers | 'rbi' Helper Functions |
| rBiasCorrection | Correct Bias in DNA Methylation Analyses |
| rbibutils | Read 'Bibtex' Files and Convert Between Bibliography Formats |
| rbin | Tools for Binning Data |
| rbioacc | Inference and Prediction of ToxicoKinetic (TK) Models |
| rbioapi | User-Friendly R Interface to Biologic Web Services' API |
| rbiom | Read/Write, Transform, and Summarize 'BIOM' Data |
| rbiouml | Interact with BioUML Server |
| rbit | Binary Indexed Tree |
| RblDataLicense | R Interface to 'Bloomberg Data License' |
| Rblpapi | R Interface to 'Bloomberg' |
| rblt | Bio-Logging Toolbox |
| rBMF | Boolean Matrix Factorization |
| rbmi | Reference Based Multiple Imputation |
| rbmn | Handling Linear Gaussian Bayesian Networks |
| RBNZ | Download Data from the Reserve Bank of New Zealand Website |
| rbooster | AdaBoost Framework for Any Classifier |
| Rborist | Extensible, Parallelizable Implementation of the Random Forest Algorithm |
| rbounds | Perform Rosenbaum Bounds Sensitivity Tests for Matched and Unmatched Data |
| RBPcurve | The Residual-Based Predictiveness Curve |
| rbridge | Restricted Bridge Estimation |
| rbscCI | Blyth-Still-Casella Confidence Interval |
| rbtc | Bitcoin API |
| RBtest | Regression-Based Approach for Testing the Type of Missing Data |
| rbtt | Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error for Non-Negative, Zero-Inflated Data |
| rbw | Residual Balancing Weights for Marginal Structural Models |
| RbyExample | Data for the Book "R by Example" |
| RCA | Relational Class Analysis |
| rcaiman | CAnopy IMage ANalysis |
| RCAL | Regularized Calibrated Estimation |
| RCALI | Calculation of the Integrated Flow of Particles Between Polygons |
| Rcan | Cancer Registry Data Analysis and Visualisation |
| Rcapture | Loglinear Models for Capture-Recapture Experiments |
| RCarb | Dose Rate Modelling of Carbonate-Rich Samples |
| rcarbon | Calibration and Analysis of Radiocarbon Dates |
| rcartocolor | 'CARTOColors' Palettes |
| Rcatch22 | Calculation of 22 Canonical Time-Series Characteristics |
| RcausalEGM | A General Causal Inference Framework by Encoding Generative Modeling |
| rcausim | Generate Causally-Simulated Data |
| rCBA | CBA Classifier |
| rcbalance | Large, Sparse Optimal Matching with Refined Covariate Balance |
| rcbayes | Estimate Rogers-Castro Migration Age Schedules with Bayesian Models |
| RCBR | Random Coefficient Binary Response Estimation |
| rcbsubset | Optimal Subset Matching with Refined Covariate Balance |
| rcc | Parametric Bootstrapping to Control Rank Conditional Coverage |
| rcccd | Class Cover Catch Digraph Classification |
| rccola | Safely Manage API Keys and Load Data from a REDCap or Other Source |
| RCCPCA | "Retained Component Criterion for Principal Component Analysis" |
| rcdd | Computational Geometry |
| rcDEA | Robust and Conditional Data Envelopment Analysis (DEA) |
| rcdk | Interface to the 'CDK' Libraries |
| rcdklibs | The CDK Libraries Packaged for R |
| RCDT | Fast 2D Constrained Delaunay Triangulation |
| RCEIM | R Cross Entropy Inspired Method for Optimization |
| rcens | Generate Sample Censoring |
| Rcereal | "Cereal Headers for R and C++ Serialization" |
| RcextTools | Analytical Procedures in Support of Brazilian Public Sector External Auditing |
| RCGLS | Download and Open Data Provided by the Copernicus Global Land Service |
| rchallenge | A Simple Data Science Challenge System |
| rchemo | Dimension Reduction, Regression and Discrimination for Chemometrics |
| rcheology | Data on Base and Recommended Packages for Current and Previous Versions of R |
| RChest | Locating Distributional Changes in Highly Dependent Time Series |
| RchivalTag | Analyzing and Interactive Visualization of Archival Tagging Data |
| Rchoice | Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters |
| rChoiceDialogs | 'rChoiceDialogs' Collection |
| RChronoModel | Post-Processing of the Markov Chain Simulated by ChronoModel or Oxcal |
| rciplot | Plot Jacobson-Truax Reliable Change Indices |
| RCircos | Circos 2D Track Plot |
| rcites | R Interface to the Species+ Database |
| RCLabels | Manipulate Matrix Row and Column Labels with Ease |
| RClickhouse | 'Yandex Clickhouse' Interface for R with Basic 'dplyr' Support |
| RClimacell | R Wrapper for the 'Climacell' API |
| rclipboard | Shiny/R Wrapper for 'clipboard.js' |
| RclusTool | Graphical Toolbox for Clustering and Classification of Data Frames |
| rCMA | R-to-Java Interface for 'CMA-ES' |
| rcmdcheck | Run 'R CMD check' from 'R' and Capture Results |
| Rcmdr | R Commander |
| RcmdrMisc | R Commander Miscellaneous Functions |
| RcmdrPlugin.aRnova | R Commander Plug-in for Repeated-Measures ANOVA |
| RcmdrPlugin.BiclustGUI | 'Rcmdr' Plug-in GUI for Biclustering |
| RcmdrPlugin.BWS1 | R Commander Plug-in for Case 1 Best-Worst Scaling |
| RcmdrPlugin.BWS2 | R Commander Plug-in for Case 2 Best-Worst Scaling |
| RcmdrPlugin.BWS3 | R Commander Plug-in for Case 3 Best-Worst Scaling |
| RcmdrPlugin.cpd | R Commander Plug-in for Complex Pearson Distributions |
| RcmdrPlugin.DCCV | R Commander Plug-in for Dichotomous Choice Contingent Valuation |
| RcmdrPlugin.DCE | R Commander Plug-in for Discrete Choice Experiments |
| RcmdrPlugin.depthTools | R Commander Depth Tools Plug-in |
| RcmdrPlugin.DoE | R Commander Plugin for (Industrial) Design of Experiments |
| RcmdrPlugin.EACSPIR | Plugin de R-Commander para el Manual 'EACSPIR' |
| RcmdrPlugin.EBM | Rcmdr Evidence Based Medicine Plug-in Package |
| RcmdrPlugin.EcoVirtual | Rcmdr EcoVirtual Plugin |
| RcmdrPlugin.Export | Export R Output to LaTeX or HTML |
| RcmdrPlugin.EZR | R Commander Plug-in for the EZR (Easy R) Package |
| RcmdrPlugin.FactoMineR | Graphical User Interface for FactoMineR |
| RcmdrPlugin.GWRM | R Commander Plug-in for Fitting Generalized Waring Regression Models |
| RcmdrPlugin.HH | Rcmdr Support for the HH Package |
| RcmdrPlugin.KMggplot2 | R Commander Plug-in for Data Visualization with 'ggplot2' |
| RcmdrPlugin.MA | Graphical User Interface for Conducting Meta-Analyses in R |
| RcmdrPlugin.MPAStats | R Commander Plug-in for MPA Statistics |
| RcmdrPlugin.NMBU | R Commander Plug-in for University Level Applied Statistics |
| RcmdrPlugin.orloca | A GUI for Planar Location Problems |
| RcmdrPlugin.PcaRobust | R Commander Plug-in for Robust Principal Component Analysis |
| RcmdrPlugin.RiskDemo | R Commander Plug-in for Risk Demonstration |
| RcmdrPlugin.RMTCJags | R MTC Jags 'Rcmdr' Plugin |
| RcmdrPlugin.ROC | Rcmdr Receiver Operator Characteristic Plug-in Package |
| RcmdrPlugin.sos | Efficiently search the R help pages |
| RcmdrPlugin.survival | R Commander Plug-in for the 'survival' Package |
| RcmdrPlugin.TeachingDemos | Rcmdr Teaching Demos Plug-in |
| RcmdrPlugin.TeachStat | R Commander Plugin for Teaching Statistical Methods |
| RcmdrPlugin.temis | Graphical Integrated Text Mining Solution |
| RcmdrPlugin.UCA | UCA Rcmdr Plug-in |
| RcmdrPlugin.WorldFlora | R Commander Plug-in for the 'WorldFlora' Package |
| RCMinification | Random Coefficient Minification Time Series Models |
| rCNV | Detect Copy Number Variants from SNPs Data |
| rco | The R Code Optimizer |
| rcoder | Lightweight Data Structure for Recoding Categorical Data without Factors |
| RCognito | A Simplified Interface for 'Amazon Cognito' |
| RColetum | Access your Coletum's Data from API |
| rcollectadhd | Collection of Data Sets Containing ADHD Related Data |
| RColorBrewer | ColorBrewer Palettes |
| RColorConesa | Conesa Colors Palette |
| rcolors | 270 'NCL' Color Tables in R Language |
| Rcompadre | Utilities for using the 'COM(P)ADRE' Matrix Model Database |
| rcompanion | Functions to Support Extension Education Program Evaluation |
| rcompendium | Create a Package or Research Compendium Structure |
| rconfig | Manage R Configuration at the Command Line |
| RConics | Computations on Conics |
| rcontroll | Individual-Based Forest Growth Simulator 'TROLL' |
| rcorpora | A Collection of Small Text Corpora of Interesting Data |
| RCPA | Consensus Pathway Analysis |
| RCPA3 | Data and Functions for R Companion to Political Analysis 3rd Ed |
| Rcplex | R Interface to CPLEX |
| Rcpp | Seamless R and C++ Integration |
| Rcpp11 | R and C++11 |
| RcppAlgos | High Performance Tools for Combinatorics and Computational Mathematics |
| RcppAnnoy | 'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors |
| RcppAPT | 'Rcpp' Interface to the APT Package Manager |
| RcppArmadillo | 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library |
| RcppArray | 'Rcpp' Meets 'C++' Arrays |
| RcppBDT | 'Rcpp' Bindings for the Boost Date_Time Library |
| RcppBessel | Bessel Functions Rcpp Interface |
| RcppBigIntAlgos | Factor Big Integers with the Parallel Quadratic Sieve |
| RcppBlaze | 'Rcpp' Integration for the 'Blaze' High-Performance 'C++' Math Library |
| RcppCCTZ | 'Rcpp' Bindings for the 'CCTZ' Library |
| RcppCensSpatial | Spatial Estimation and Prediction for Censored/Missing Responses |
| RcppCGAL | 'Rcpp' Integration for 'CGAL' |
| RcppClassic | Deprecated 'classic' 'Rcpp' 'API' |
| RcppClassicExamples | Examples using 'RcppClassic' to Interface R and C++ |
| RcppClock | Seamless 'Rcpp' Benchmarking |
| RcppCNPy | Read-Write Support for 'NumPy' Files via 'Rcpp' |
| RcppColors | Color Mappings and 'C++' Header Files for Color Conversion |
| RcppCWB | 'Rcpp' Bindings for the 'Corpus Workbench' ('CWB') |
| RcppDate | 'date' C++ Header Library for Date and Time Functionality |
| RcppDE | Global Optimization by Differential Evolution in C++ |
| RcppDist | 'Rcpp' Integration of Additional Probability Distributions |
| RcppDynProg | 'Rcpp' Dynamic Programming |
| RcppEigen | 'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library |
| RcppEnsmallen | Header-Only C++ Mathematical Optimization Library for 'Armadillo' |
| RcppExamples | Examples using 'Rcpp' to Interface R and C++ |
| RcppFarmHash | Interface to the Google 'FarmHash' Family of Hash Functions |
| RcppFastAD | 'Rcpp' Bindings to 'FastAD' Auto-Differentiation |
| RcppFastFloat | 'Rcpp' Bindings for the 'fast_float' Header-Only Library for Number Parsing |
| RcppGetconf | 'Rcpp' Interface for Querying System Configuration Variables |
| RcppGreedySetCover | Greedy Set Cover |
| RcppGSL | 'Rcpp' Integration for 'GNU GSL' Vectors and Matrices |
| RcppHMM | Rcpp Hidden Markov Model |
| RcppHNSW | 'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors |
| RcppHungarian | Solves Minimum Cost Bipartite Matching Problems |
| RcppInt64 | 'Rcpp'-Based Helper Functions to Pass 'Int64' and 'nanotime' Values Between 'R' and 'C++' |
| RcppJagger | An R Wrapper for Jagger |
| RcppLbfgsBlaze | 'L-BFGS' Algorithm Based on 'Blaze' for 'R' and 'Rcpp' |
| RcppMagicEnum | 'Rcpp' Bindings to 'Magic Enum' 'C++' 'Enum' Support |
| RcppMeCab | 'rcpp' Wrapper for 'mecab' Library |
| RcppML | Rcpp Machine Learning Library |
| RcppMsgPack | 'MsgPack' C++ Header Files and Interface Functions for R |
| RcppNLoptExample | 'Rcpp' Package Illustrating Header-Only Access to 'NLopt' |
| RcppNumerical | 'Rcpp' Integration for Numerical Computing Libraries |
| RcppParallel | Parallel Programming Tools for 'Rcpp' |
| RcppProgress | An Interruptible Progress Bar with OpenMP Support for C++ in R Packages |
| RcppQuantuccia | R Bindings to the Calendaring Functionality of 'QuantLib' |
| RcppRedis | 'Rcpp' Bindings for 'Redis' using the 'hiredis' Library |
| RcppRoll | Efficient Rolling / Windowed Operations |
| RcppSimdJson | 'Rcpp' Bindings for the 'simdjson' Header-Only Library for 'JSON' Parsing |
| RcppSMC | Rcpp Bindings for Sequential Monte Carlo |
| RcppSpdlog | R and C++ Interfaces to 'spdlog' C++ Header Library for Logging |
| RcppStreams | 'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream Processing |
| RcppThread | R-Friendly Threading in C++ |
| rcpptimer | 'Rcpp' Tic-Toc Timer with 'OpenMP' Support |
| RcppTN | Rcpp-Based Truncated Normal Distribution RNG and Family |
| RcppTOML | 'Rcpp' Bindings to Parser for "Tom's Obvious Markup Language" |
| RcppUUID | Generating Universally Unique Identificators |
| RcppXPtrUtils | XPtr Add-Ons for 'Rcpp' |
| RcppXsimd | Xsimd C++ Header-Only Library Files |
| RcppXts | Interface the 'xts' API via 'Rcpp' |
| RcppZiggurat | 'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations |
| rcprd | Extraction and Management of Clinical Practice Research Datalink Data |
| Rcrawler | Web Crawler and Scraper |
| RCreliability | Correct Bias in Estimated Regression Coefficients |
| rcrimeanalysis | An Implementation of Crime Analysis Methods |
| RCriteo | Loading Criteo Data into R |
| Rcriticor | Pierre-Goldwin Correlogram |
| RCRnorm | An Integrated Regression Model for Normalizing 'NanoString nCounter' Data |
| rcrossref | Client for Various 'CrossRef' 'APIs' |
| Rcsdp | R Interface to the CSDP Semidefinite Programming Library |
| RCSF | Airborne LiDAR Filtering Method Based on Cloth Simulation |
| rcssci | Visualization of Restricted Cubic Splines |
| Rcssplot | Styling of Graphics using Cascading Style Sheets |
| RCT | Assign Treatments, Power Calculations, Balances, Impact Evaluation of Experiments |
| RCT2 | Designing and Analyzing Two-Stage Randomized Experiments |
| rct3 | Predict Fish Year-Class Strength from Survey Data |
| RCTrep | Validation of Estimates of Treatment Effects in Observational Data |
| RCTS | Clustering Time Series While Resisting Outliers |
| rcube | Simulations and Visualizations of Rubik's Cube (with Mods) |
| RCurl | General Network (HTTP/FTP/...) Client Interface for R |
| Rcurvep | Concentration-Response Data Analysis using Curvep |
| RCytoGPS | Using Cytogenetics Data in R |
| RCzechia | Spatial Objects of the Czech Republic |
| Rd2md | Markdown Reference Manuals |
| Rd2roxygen | Convert Rd to 'Roxygen' Documentation |
| rD3plot | Interactive Networks, Timelines, Barplots, Galleries with 'D3.js' |
| rda | Shrunken Centroids Regularized Discriminant Analysis |
| rdacca.hp | Hierarchical and Variation Partitioning for Canonical Analysis |
| rdaisi | R Client for the Daisi Microservice Platform |
| rdatacite | Client for the 'DataCite' API |
| rDataPipeline | Functions to Interact with the 'FAIR Data Pipeline' |
| rdataretriever | R Interface to the Data Retriever |
| rdbnomics | Download DBnomics Data |
| rdd | Regression Discontinuity Estimation |
| rddapp | Regression Discontinuity Design Application |
| rddensity | Manipulation Testing Based on Density Discontinuity |
| rddi | R Interface to DDI Codebook 2.5 |
| rddtools | Toolbox for Regression Discontinuity Design ('RDD') |
| rde | Reproducible Data Embedding |
| rDEA | Robust Data Envelopment Analysis (DEA) for R |
| rdecision | Decision Analytic Modelling in Health Economics |
| rDecode | Descent-Based Calibrated Optimal Direct Estimation |
| rdeps | Identify External Packages Used in a Project |
| rdflib | Tools to Manipulate and Query Semantic Data |
| rdfp | An Implementation of the 'DoubleClick for Publishers' API |
| RDHonest | Honest Inference in Regression Discontinuity Designs |
| rdhs | API Client and Dataset Management for the Demographic and Health Survey (DHS) Data |
| rdi | Repertoire Dissimilarity Index |
| Rdiagnosislist | Manipulate SNOMED CT Diagnosis Lists |
| rdian | Client Library for The Guardian |
| Rdice | A Collection of Functions to Experiment Dice Rolls |
| RDieHarder | R Interface to the 'DieHarder' RNG Test Suite |
| Rdimtools | Dimension Reduction and Estimation Methods |
| rdist | Calculate Pairwise Distances |
| Rdistance | Distance-Sampling Analyses for Density and Abundance Estimation |
| rdiversity | Measurement and Partitioning of Similarity-Sensitive Biodiversity |
| rdlocrand | Local Randomization Methods for RD Designs |
| RDM | Quantify Dependence using Rearranged Dependence Measures |
| RDML | Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files |
| rdmulti | Analysis of RD Designs with Multiple Cutoffs or Scores |
| rdnb | R Interface to the 'Deutsche Nationalbibliothek (German National Library) API' |
| RDnp | Robust Test for Complete Independence in High-Dimensions |
| rdomains | Get the Category of Content Hosted by a Domain |
| RDota2 | An R Steam API Client for Valve's Dota2 |
| rdoxygen | Create Doxygen Documentation for Source Code |
| RDP | The Ramer-Douglas-Peucker Algorithm |
| Rdpack | Update and Manipulate Rd Documentation Objects |
| rdpower | Power Calculations for RD Designs |
| rdracor | Access to the 'DraCor' API |
| rdrobust | Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs |
| Rdrw | Univariate and Multivariate Damped Random Walk Processes |
| rdryad | Access for Dryad Web Services |
| RDS | Respondent-Driven Sampling |
| Rdsdp | R Interface to DSDP Semidefinite Programming Library |
| RDSsamplesize | RDS Sample Size Estimation and Power Calculation |
| RDStreeboot | RDS Tree Bootstrap Method |
| Rdta | Data Transforming Augmentation for Linear Mixed Models |
| rdtLite | Provenance Collector |
| Rduino | A Microcontroller Interface |
| Rduinoiot | 'Arduino Iot Cloud API' R Client |
| Rdune | 'Creates Color Palettes Inspired by Dune' |
| rdwd | Select and Download Climate Data from 'DWD' (German Weather Service) |
| rdwplus | An Implementation of IDW-PLUS |
| re | 'Python' Style Regular Expression Functions |
| re2 | R Interface to Google RE2 (C++) Regular Expression Library |
| react | Reactivity Helper for 'shiny' |
| reactable | Interactive Data Tables for R |
| reactable.extras | Extra Features for 'reactable' Package |
| reactablefmtr | Streamlined Table Styling and Formatting for Reactable |
| reactCheckbox | Checkbox Group Input for 'Shiny' |
| reactlog | Reactivity Visualizer for 'shiny' |
| reactR | React Helpers |
| ReacTran | Reactive Transport Modelling in 1d, 2d and 3d |
| ReAD | Powerful Replicability Analysis of Genome-Wide Association Studies |
| read.gb | Open GenBank Files |
| read.gt3x | Parse 'ActiGraph' 'GT3X'/'GT3X+' 'Accelerometer' Data |
| readABF | Loads Axon Binary Files |
| readabs | Download and Tidy Time Series Data from the Australian Bureau of Statistics |
| readbitmap | Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG,TIFF) |
| readBrukerFlexData | Reads Mass Spectrometry Data in Bruker *flex Format |
| readbulk | Read and Combine Multiple Data Files |
| ReadDIM | Read ESA SNAP Processed Raster Format in R |
| reader | Suite of Functions to Flexibly Read Data from Files |
| readHAC | Read Acoustic HAC Format |
| readit | Effortlessly Read Any Rectangular Data |
| readJDX | Import Data in the JCAMP-DX Format |
| readMDTable | Read Markdown Tables into Tibbles |
| readme2vignette | Convert README to Vignette During Package Installation |
| readmet | Read some less Popular Formats Used in Meteorology |
| readmission | Hospital Readmission Data for Patients with Diabetes |
| readMLData | Reading Machine Learning Benchmark Data Sets in Different Formats |
| readmoRe | Utilities for Importing and Manipulating Biomedical Data Files |
| readMzXmlData | Reads Mass Spectrometry Data in mzXML Format |
| readNSx | Read 'Blackrock-Microsystems' Files ('NEV', 'NSx') |
| readobj | Fast Reader for 'Wavefront' OBJ 3D Scene Files |
| readODS | Read and Write ODS Files |
| readOffice | Read Text Out of Modern Office Files |
| readr | Read Rectangular Text Data |
| readrba | Download and Tidy Data from the Reserve Bank of Australia |
| readroper | Simply Read ASCII Single and Multicard Polling Datasets |
| readsdmx | Read SDMX-XML Data |
| readsdr | Translate Models from System Dynamics Software into 'R' |
| readsparse | Read and Write Sparse Matrices in 'SVMLight' and 'LibSVM' Formats |
| readstata13 | Import 'Stata' Data Files |
| readtext | Import and Handling for Plain and Formatted Text Files |
| readtextgrid | Read in a 'Praat' 'TextGrid' File |
| readwritesqlite | Enhanced Reading and Writing for 'SQLite' Databases |
| readxl | Read Excel Files |
| readxlsb | Read 'Excel' Binary (.xlsb) Workbooks |
| ready4 | Develop and Use Modular Health Economic Models |
| realtest | Where Expectations Meet Reality: Realistic Unit Testing |
| realTimeloads | Analyte Flux and Load from Estimates of Concentration and Discharge |
| RealVAMS | Multivariate VAM Fitting |
| ream | Density, Distribution, and Sampling Functions for Evidence Accumulation Models |
| reappraised | Statistical Tools for Assessing Publication Integrity of Groups of Trials |
| Rearrangement | Monotonize Point and Interval Functional Estimates by Rearrangement |
| rearrr | Rearranging Data |
| reasonabletools | Clean Water Quality Data for NPDES Reasonable Potential Analyses |
| REAT | Regional Economic Analysis Toolbox |
| REBayes | Empirical Bayes Estimation and Inference |
| rebib | Convert and Aggregate Bibliographies |
| rebird | R Client for the eBird Database of Bird Observations |
| rebmix | Finite Mixture Modeling, Clustering & Classification |
| rebus | Build Regular Expressions in a Human Readable Way |
| rebus.base | Core Functionality for the 'rebus' Package |
| rebus.datetimes | Date and Time Extensions for the 'rebus' Package |
| rebus.numbers | Numeric Extensions for the 'rebus' Package |
| rebus.unicode | Unicode Extensions for the 'rebus' Package |
| RECA | Relevant Component Analysis for Supervised Distance Metric Learning |
| recalibratiNN | Quantile Recalibration for Regression Models |
| recapr | Two Event Mark-Recapture Experiment |
| RecAssoRules | Recursive Mining for Frequent Pattern and Confident Association Rules |
| receptiviti | Text Analysis Through the 'Receptiviti' API |
| recexcavAAR | 3D Reconstruction of Archaeological Excavations |
| rechaRge | HydroBudget – Groundwater Recharge Model |
| rechonest | R Interface to Echo Nest API |
| recipes | Preprocessing and Feature Engineering Steps for Modeling |
| reclin2 | Record Linkage Toolkit |
| recluster | Ordination Methods for the Analysis of Beta-Diversity Indices |
| recmap | Compute the Rectangular Statistical Cartogram |
| recmetrics | Psychometric Evaluation Using Relative Excess Correlations |
| Recocrop | Estimating Environmental Suitability for Plants |
| recodeflow | Interface Functions for PMML Creation, and Data Recoding |
| recogito | Interactive Annotation of Text and Images |
| recolorize | Color-Based Image Segmentation |
| recombinator | Recombinate Nested Lists to Dataframes |
| recometrics | Evaluation Metrics for Implicit-Feedback Recommender Systems |
| recommenderlab | Lab for Developing and Testing Recommender Algorithms |
| recommenderlabBX | Book-Crossing Dataset (BX) for 'recommenderlab' |
| recommenderlabJester | Jester Dataset for 'recommenderlab' |
| Recon | Computational Tools for Economics |
| reconstructKM | Reconstruct Individual-Level Data from Published KM Plots |
| reconstructr | Session Reconstruction and Analysis |
| recorder | Toolkit to Validate New Data for a Predictive Model |
| RecordLinkage | Record Linkage Functions for Linking and Deduplicating Data Sets |
| Records | Record Values and Record Times |
| RecordTest | Inference Tools in Time Series Based on Record Statistics |
| recosystem | Recommender System using Matrix Factorization |
| recurrentpseudo | Creates Pseudo-Observations and Analysis for Recurrent Event Data |
| recurse | Computes Revisitation Metrics for Trajectory Data |
| red | IUCN Redlisting Tools |
| reda | Recurrent Event Data Analysis |
| ReDaMoR | Relational Data Modeler |
| REdaS | Companion Package to the Book 'R: Einführung durch angewandte Statistik' |
| redatam | Import 'REDATAM' Files |
| redatamx | R Interface to 'Redatam' Library |
| redbookperu | Access and Analyze Data from the Red Book of Endemic Plants of Peru |
| redcapAPI | Interface to 'REDCap' |
| REDCapCAST | REDCap Castellated Data Handling |
| REDCapDM | 'REDCap' Data Management |
| REDCapExporter | Automated Construction of R Data Packages from REDCap Projects |
| REDCapR | Interaction Between R and REDCap |
| REDCapTidieR | Extract 'REDCap' Databases into Tidy 'Tibble's |
| redcas | An Interface to the Computer Algebra System 'REDUCE' |
| redditadsR | Get Reddit Ads Data via the 'Windsor.ai' API |
| RedditExtractoR | Reddit Data Extraction Toolkit |
| reddPrec | Reconstruction of Daily Data - Precipitation |
| REddyProc | Post Processing of (Half-)Hourly Eddy-Covariance Measurements |
| REddyProcNCDF | Reading Data from NetCDF Files for 'REddyProc' |
| REDI | Robust Exponential Decreasing Index |
| ReDirection | Predict Dominant Direction of Reactions of a Biochemical Network |
| RedisBaseContainer | The Container for the DockerParallel Package |
| Rediscover | Identify Mutually Exclusive Mutations |
| redist | Simulation Methods for Legislative Redistricting |
| redistmetrics | Redistricting Metrics |
| redistverse | Easily Install and Load Redistricting Software |
| redland | RDF Library Bindings in R |
| redlistr | Tools for the IUCN Red List of Ecosystems and Species |
| rEDM | Empirical Dynamic Modeling ('EDM') |
| Redmonder | Microsoft(r)-Inspired Color Palettes |
| redoc | Generates 'Redoc' Documentation from an 'OpenAPI' Specification |
| redux | R Bindings to 'hiredis' |
| REEMtree | Regression Trees with Random Effects for Longitudinal (Panel) Data |
| ref.ICAR | Objective Bayes Intrinsic Conditional Autoregressive Model for Areal Data |
| REFA | Robust Exponential Factor Analysis |
| RefBasedMI | Reference-Based Imputation for Longitudinal Clinical Trials with Protocol Deviation |
| refer | Create Object References |
| referenceIntervals | Reference Intervals |
| REffectivePred | Pandemic Prediction Model in an SIRS Framework |
| refineR | Reference Interval Estimation using Real-World Data |
| refinr | Cluster and Merge Similar Values Within a Character Vector |
| refitME | Measurement Error Modelling using MCEM |
| reflectR | Automatic Scoring of the Cognitive Reflection Test |
| reflimR | Reference Limit Estimation Using Routine Laboratory Data |
| RefManageR | Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management |
| reformulas | Machinery for Processing Random Effect Formulas |
| refreg | Conditional Multivariate Reference Regions |
| refreshr | Work with Refreshable Datasets that Update their Data Automatically |
| refseqR | Common Computational Operations Working with RefSeq Entries (GenBank) |
| refset | Subsets with Reference Semantics |
| refuge | Locate Trans and Intersex-Friendly Toilets |
| refugees | UNHCR Refugee Population Statistics Database |
| refund | Regression with Functional Data |
| refund.shiny | Interactive Plotting for Functional Data Analyses |
| RegAssure | Streamlined Integration of Regression Assumption |
| regclass | Tools for an Introductory Class in Regression and Modeling |
| RegCombin | Partially Linear Regression under Data Combination |
| regda | Regularised Discriminant Analysis |
| regDIF | Regularized Differential Item Functioning |
| REGENT | Risk Estimation for Genetic and Environmental Traits |
| regexPipes | Wrappers Around 'base::grep()' for Use with Pipes |
| regexSelect | Regular Expressions in 'shiny' Select Lists |
| reghelper | Helper Functions for Regression Analysis |
| regional | Intra- and Inter-Regional Similarity |
| regioncode | Convert Region Names and Division Codes of China Over Years |
| regions | Processing Regional Statistics |
| registr | Curve Registration for Exponential Family Functional Data |
| registry | Infrastructure for R Package Registries |
| RegKink | Regression Kink with a Time-Varying Threshold |
| reglogit | Simulation-Based Regularized Logistic Regression |
| regmed | Regularized Mediation Analysis |
| regmedint | Regression-Based Causal Mediation Analysis with Interaction and Effect Modification Terms |
| regmhmm | 'regmhmm' Fits Hidden Markov Models with Regularization |
| regMMD | Robust Regression and Estimation Through Maximum Mean Discrepancy Minimization |
| regnet | Network-Based Regularization for Generalized Linear Models |
| rego | Automatic Time Series Forecasting and Missing Value Imputation |
| regplot | Enhanced Regression Nomogram Plot |
| regport | Regression Model Processing Port |
| regr.easy | Easy Linear, Quadratic and Cubic Regression Models |
| regrap | Reverse Graphical Approaches |
| RegrCoeffsExplorer | Efficient Visualization of Regression Coefficients for lm(), glm(), and glmnet() Objects |
| regreplaceR | Match and Replace Strings Based on Named Groups in Regular Expressions |
| regress | Gaussian Linear Models with Linear Covariance Structure |
| regressinator | Simulate and Diagnose (Generalized) Linear Models |
| RegressionFactory | Expander Functions for Generating Full Gradient and Hessian from Single-Slot and Multi-Slot Base Distributions |
| regressoR | Regression Data Analysis System |
| regrrr | Toolkit for Compiling, (Post-Hoc) Testing, and Plotting Regression Results |
| regRSM | Random Subspace Method (RSM) for Linear Regression |
| RegSDC | Information Preserving Regression-Based Tools for Statistical Disclosure Control |
| regsem | Regularized Structural Equation Modeling |
| regspec | Non-Parametric Bayesian Spectrum Estimation for Multirate Data |
| regsubseq | Detect and Test Regular Sequences and Subsequences |
| regtomean | Regression Toward the Mean |
| regtools | Regression and Classification Tools |
| rehh | Searching for Footprints of Selection using 'Extended Haplotype Homozygosity' Based Tests |
| rehh.data | Data Only: Searching for Footprints of Selection using Haplotype Homozygosity Based Tests |
| rehydratoR | Downloads Tweets from a List of Tweet IDs |
| ReinforcementLearning | Model-Free Reinforcement Learning |
| ReIns | Functions from "Reinsurance: Actuarial and Statistical Aspects" |
| reinstallr | Search and Install Missing Packages |
| reinsureR | Reinsurance Treaties Application |
| relaimpo | Relative Importance of Regressors in Linear Models |
| relatable | Functions for Mapping Key-Value Pairs, Many-to-Many, One-to-Many, and Many-to-One Relations |
| Relatedness | Maximum Likelihood Estimation of Relatedness using EM Algorithm |
| relations | Data Structures and Algorithms for Relations |
| relcircle | Draw Regulatory Relationships Between Genes |
| reldist | Relative Distribution Methods |
| RelDists | Estimation for some Reliability Distributions |
| Relectoral | Electoral Analysis |
| relevance | Calculate Relevance and Significance Measures |
| relevent | Relational Event Models |
| relgam | Reluctant Generalized Additive Models |
| reliabilitydiag | Reliability Diagrams Using Isotonic Regression |
| ReliabilityTheory | Structural Reliability Analysis |
| ReliaGrowR | Reliability Growth Analysis |
| relimp | Relative Contribution of Effects in a Regression Model |
| RelimpPCR | Relative Importance PCA Regression |
| relliptical | The Truncated Elliptical Family of Distributions |
| relMix | Relationship Inference for DNA Mixtures |
| relSim | Relative Simulator |
| relsurv | Relative Survival |
| rem | Relational Event Models (REM) |
| rema | Rare Event Meta Analysis |
| remaCor | Random Effects Meta-Analysis for Correlated Test Statistics |
| remap | Regional Spatial Modeling with Continuous Borders |
| rematch | Match Regular Expressions with a Nicer 'API' |
| rematch2 | Tidy Output from Regular Expression Matching |
| remedy | 'RStudio' Addins to Simplify 'Markdown' Writing |
| ReMFPCA | Regularized Multivariate Functional Principal Component Analysis |
| remify | Processing and Transforming Relational Event History Data |
| remindR | Insert and Extract "Reminders" from Function Comments |
| remiod | Reference-Based Multiple Imputation for Ordinal/Binary Response |
| REMLA | Robust Expectation-Maximization Estimation for Latent Variable Models |
| rEMM | Extensible Markov Model for Modelling Temporal Relationships Between Clusters |
| remmy | API Client for 'Lemmy' |
| remote | Empirical Orthogonal Teleconnections in R |
| remotePARTS | Spatiotemporal Autoregression Analyses for Large Data Sets |
| remotes | R Package Installation from Remote Repositories, Including 'GitHub' |
| rempsyc | Convenience Functions for Psychology |
| remss | Refining Evaluation Methodology on Stage System |
| remstats | Computes Statistics for Relational Event History Data |
| remstimate | Optimization Frameworks for Tie-Oriented and Actor-Oriented Relational Event Models |
| REN | Regularization Ensemble for Robust Portfolio Optimization |
| rENA | Epistemic Network Analysis |
| REndo | Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables |
| Renext | Renewal Method for Extreme Values Extrapolation |
| renpow | Renewable Power Systems and the Environment |
| rentrez | 'Entrez' in R |
| renv | Project Environments |
| Renvlp | Computing Envelope Estimators |
| RenvModule | Interface to Allow Full Use of the Environment Modules System for Unix |
| renz | R-Enzymology |
| repairData | Open Repair Alliance Datasets 2021 |
| repana | Repeatable Analysis in R |
| RepaymentPlan | Calculation of Mortgage Plan or Repayment Plan |
| repeated | Non-Normal Repeated Measurements Models |
| RepeatedHighDim | Methods for High-Dimensional Repeated Measures Data |
| repec | Access RePEc Data Through API |
| repello | Reports from Trello in R |
| RepertoiR | Repertoire Graphical Visualization |
| repfdr | Replicability Analysis for Multiple Studies of High Dimension |
| replacer | A Value Replacement Utility |
| REPLesentR | Presentations in the REPL |
| Replicate | Statistical Metrics for Multisite Replication Studies |
| replicateBE | Average Bioequivalence with Expanding Limits (ABEL) |
| replicatedpp2w | Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns |
| ReplicationSuccess | Design and Analysis of Replication Studies |
| Repliscope | Replication Timing Profiling using DNA Copy Number |
| repmis | Miscellaneous Tools for Reproducible Research |
| repmod | Create Report Table from Different Objects |
| repo | A Data-Centered Data Flow Manager |
| RepoGenerator | Generates a Project and Repo for Easy Initialization of a Workshop |
| repolr | Repeated Measures Proportional Odds Logistic Regression |
| report | Automated Reporting of Results and Statistical Models |
| reporter | Creates Statistical Reports |
| repoRter.nih | R Interface to the 'NIH RePORTER Project' API |
| ReporterScore | Generalized Reporter Score-Based Enrichment Analysis for Omics Data |
| reportfactory | Lightweight Infrastructure for Handling Multiple R Markdown Documents |
| reportr | A General Message and Error Reporting System |
| reportReg | An Easy Way to Report Regression Analysis |
| reportRmd | Tidy Presentation of Clinical Reporting |
| reportROC | An Easy Way to Report ROC Analysis |
| ReportSubtotal | Adds Subtotals to Data Reports |
| reporttools | Generate "LaTeX"" Tables of Descriptive Statistics |
| REPPlab | R Interface to 'EPP-Lab', a Java Program for Exploratory Projection Pursuit |
| REPPlabShiny | 'REPPlab' via a Shiny Application |
| repr | Serializable Representations |
| represent | Determine How Representative Two Multidimensional Data Sets are |
| representr | Create Representative Records After Entity Resolution |
| represtools | Reproducible Research Tools |
| reprex | Prepare Reproducible Example Code via the Clipboard |
| reproducer | Reproduce Statistical Analyses and Meta-Analyses |
| reproducible | Enhance Reproducibility of R Code |
| reproj | Coordinate System Transformations for Generic Map Data |
| repsd | Root Expected Proportion Squared Difference for Detecting DIF |
| REPTILE | Regulatory DNA Element Prediction |
| repurrrsive | Examples of Recursive Lists and Nested or Split Data Frames |
| reqres | Powerful Classes for HTTP Requests and Responses |
| REQS | R/EQS Interface |
| request | High Level 'HTTP' Client |
| Require | Installing and Loading R Packages for Reproducible Workflows |
| requiRements | Helper Package to Install Packages for R |
| requireR | R Source Code Modularizer |
| rerandPower | Power and Sample Size Calculations for Completely Randomized and Rerandomized Experiments |
| rerddap | General Purpose Client for 'ERDDAP' Servers |
| rerddapXtracto | Extracts Environmental Data from 'ERDDAP™' Web Services |
| reReg | Recurrent Event Regression |
| resample | Resampling Functions |
| resampledata | Data Sets for Mathematical Statistics with Resampling in R |
| resampledata3 | Data Sets for "Mathematical Statistics with Resampling and R" (3rd Ed) |
| resde | Estimation in Reducible Stochastic Differential Equations |
| resemble | Memory-Based Learning in Spectral Chemometrics |
| reservoir | Tools for Analysis, Design, and Operation of Water Supply Storages |
| reservoirnet | Reservoir Computing and Echo State Networks |
| reservr | Fit Distributions and Neural Networks to Censored and Truncated Data |
| RESET | Reconstruction Set Test |
| resevol | Simulate Agricultural Production and Evolution of Pesticide Resistance |
| reshape | Flexibly Reshape Data |
| reshape2 | Flexibly Reshape Data: A Reboot of the Reshape Package |
| RESI | Robust Effect Size Index (RESI) Estimation |
| RESIDE | Rapid Easy Synthesis to Inform Data Extraction |
| ResidentialEnergyConsumption | Residential Energy Consumption Data |
| resilience | Predictors of Resilience to a Stressor in a Single-Arm Study |
| ResIN | Response Item Networks |
| ResistorArray | Electrical Properties of Resistor Networks |
| reslife | Calculate Mean Residual Life (MRL) and Related Values for Different Distributions |
| reslr | Modelling Relative Sea Level Data |
| resmush | Optimize and Compress Image Files with 'reSmush.it' |
| resourcer | Resource Resolver |
| ResourceSelection | Resource Selection (Probability) Functions for Use-Availability Data |
| ResPBIBD | "Resolvable Partially Balanced Incomplete Block Designs (PBIBDs)" |
| RespirAnalyzer | Analysis Functions of Respiratory Data |
| respirometry | Tools for Conducting and Analyzing Respirometry Experiments |
| responsePatterns | Screening for Careless Responding Patterns |
| respR | Import, Process, Analyse, and Calculate Rates from Respirometry Data |
| resquin | Response Quality Indicators for Survey Research |
| RESS | Integrates R and Essentia |
| restatapi | Search and Retrieve Data from Eurostat Database |
| restatis | R Wrapper to Access a Wide Range of Germany's Federal Statistical System Databases Based on the GENESIS Web Service RESTful API of the German Federal Statistical Office (Statistisches Bundesamt/Destatis) |
| restaurant | Restaurant Data for Entity Resolution |
| restez | Create and Query a Local Copy of 'GenBank' in R |
| restfulr | R Interface to RESTful Web Services |
| restimizeapi | Functions for Working with the 'www.estimize.com' Web Services |
| RESTK | An Implementation of the RESTK Algorithm |
| restoptr | Ecological Restoration Planning |
| RestoreNet | Random-Effects Stochastic Reaction Networks |
| restriktor | Restricted Statistical Estimation and Inference for Linear Models |
| RestRserve | A Framework for Building HTTP API |
| result | Result Type for Safely Handling Operations that can Succeed or Fail |
| resultant | Utilities for Multivariate Polynomials with Rational Coefficients |
| ResultModelManager | Result Model Manager |
| resumer | Build Resumes with R |
| ReSurv | Machine Learning Models for Predicting Claim Counts |
| retel | Regularized Exponentially Tilted Empirical Likelihood |
| rethinker | RethinkDB Client |
| rethnicity | Predicting Ethnic Group from Names |
| reticulate | Interface to 'Python' |
| retriever | Generate Disease-Specific Response Signatures from the LINCS-L1000 Data |
| retrodesign | Tools for Type S (Sign) and Type M (Magnitude) Errors |
| retroharmonize | Ex Post Survey Data Harmonization |
| retrosheet | Import Professional Baseball Data from 'Retrosheet' |
| retry | Repeated Evaluation |
| ReturnCurves | Estimation of Return Curves |
| reutils | Talk to the NCBI EUtils |
| reval | Argument Table Generation for Sensitivity Analysis |
| revdbayes | Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis |
| revealedPrefs | Revealed Preferences and Microeconomic Rationality |
| revealjs | R Markdown Format for 'reveal.js' Presentations |
| RevEcoR | Reverse Ecology Analysis on Microbiome |
| reveneraR | Connect to Your 'Revenera' (Formerly 'Revulytics') Data |
| revengc | Reverse Engineering Summarized Data |
| reverseR | Linear Regression Stability to Significance Reversal |
| revert | Reversion Mutation Identifier for Sequencing Data |
| RevGadgets | Visualization and Post-Processing of 'RevBayes' Analyses |
| revgeo | Reverse Geocoding with the Photon Geocoder for OpenStreetMap, Google Maps, and Bing |
| ReviewR | A Light-Weight, Portable Tool for Reviewing Individual Patient Records |
| revpref | Tools for Computational Revealed Preference Analysis |
| RevSD | Visualizing the Standard Deviation via Revolution |
| revss | Robust Estimation in Very Small Samples |
| Revticulate | Interaction with "RevBayes" in R |
| revtools | Tools to Support Evidence Synthesis |
| revulyticsR | Connect to Your 'Revulytics' Data |
| rewie | Data Preparation and Diagnostics for Random Effects Within Estimator |
| rex | Friendly Regular Expressions |
| rexer | Random Exercises and Exams Generator |
| Rexperigen | R Interface to Experigen |
| rexpokit | R Wrappers for EXPOKIT; Other Matrix Functions |
| rextendr | Call Rust Code from R using the 'extendr' Crate |
| Rfacebook | Access to Facebook API via R |
| rfacebookstat | Load Data from Facebook API Marketing |
| rfacts | R Interface to 'FACTS' on Unix-Like Systems |
| rfars | Download and Analyze Crash Data |
| Rfast | A Collection of Efficient and Extremely Fast R Functions |
| Rfast2 | A Collection of Efficient and Extremely Fast R Functions II |
| RFCCA | Random Forest with Canonical Correlation Analysis |
| RFclust | Random Forest Cluster Analysis |
| RfEmpImp | Multiple Imputation using Chained Random Forests |
| rFerns | Random Ferns Classifier |
| rfieldclimate | Client for the 'FieldClimate' API |
| rfigshare | An R Interface to 'figshare' |
| rfinterval | Predictive Inference for Random Forests |
| rfishbase | R Interface to 'FishBase' |
| RFishBC | Back-Calculation of Fish Length |
| rfishdraw | Automatically Generated Fish Drawings via JavaScript |
| rfisheries | 'Programmatic Interface to the 'openfisheries.org' API' |
| rfishnet2 | Exploratory Data Analysis for FishNet2 Data |
| Rfit | Rank-Based Estimation for Linear Models |
| rflashtext | FlashText Algorithm for Finding and Replacing Words |
| rflexscan | The Flexible Spatial Scan Statistic |
| RFlocalfdr | Significance Level for Random Forest Impurity Importance Scores |
| RFlocalfdr.data | Data for the Vignette and Examples in 'RFlocalfdr' |
| RFLPtools | Tools to Analyse RFLP Data |
| rflsgen | Neutral Landscape Generator with Targets on Landscape Indices |
| rfm | Recency, Frequency and Monetary Value Analysis |
| Rfmtool | Fuzzy Measure Tools |
| rfoaas | R Interface to 'FOAAS' |
| RFOC | Graphics for Spherical Distributions and Earthquake Focal Mechanisms |
| rfold | Working with many R Folders Within an R Package |
| Rfolding | The Folding Test of Unimodality |
| rfordummies | Code Examples to Accompany the Book "R for Dummies" |
| Rforestry | Random Forests, Linear Trees, and Gradient Boosting for Inference and Interpretability |
| RFormatter | R Source Code Formatter |
| rfPermute | Estimate Permutation p-Values for Random Forest Importance Metrics |
| RFPM | Floating Percentile Model |
| RFpredInterval | Prediction Intervals with Random Forests and Boosted Forests |
| Rfractran | A 'FRACTRAN' Interpreter and Some Helper Functions |
| rFSA | Feasible Solution Algorithm for Finding Best Subsets and Interactions |
| Rfssa | Functional Singular Spectrum Analysis |
| rFUSION | Interface to FUSION |
| rfVarImpOOB | Unbiased Variable Importance for Random Forests |
| rfvimptest | Sequential Permutation Testing of Random Forest Variable Importance Measures |
| rfviz | Interactive Visualization Tool for Random Forests |
| rgabriel | Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot |
| RGAN | Generative Adversarial Nets (GAN) in R |
| RGAP | Production Function Output Gap Estimation |
| rgbif | Interface to the Global Biodiversity Information Facility API |
| RGBM | LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction |
| Rgbp | Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data |
| RGCCA | Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data |
| RGCxGC | Preprocessing and Multivariate Analysis of Bidimensional Gas Chromatography Data |
| rgdax | Wrapper for 'Coinbase Pro (erstwhile GDAX)' Cryptocurrency Exchange |
| RGE | Response from Genotype to Environment |
| rgee | R Bindings for Calling the 'Earth Engine' API |
| rgeedim | Search, Composite, and Download 'Google Earth Engine' Imagery with the 'Python' Module 'geedim' |
| rgen | Random Sampling Distribution C++ Routines for Armadillo |
| RGenData | Generates Multivariate Nonnormal Data and Determines How Many Factors to Retain |
| RGENERATE | Tools to Generate Vector Time Series |
| RGENERATEPREC | Tools to Generate Daily-Precipitation Time Series |
| RGenetics | R packages for genetics research |
| rgenius | Get 'Genius' API Lyrics |
| rgenoud | R Version of GENetic Optimization Using Derivatives |
| rgeoboundaries | geoBoundaries Client |
| RGeode | Geometric Density Estimation |
| rgeomstats | Interface to 'Geomstats' |
| rgeopat2 | Additional Functions for 'GeoPAT' 2 |
| rgexf | Build, Import, and Export GEXF Graph Files |
| RGF | Regularized Greedy Forest |
| Rgff | R Utilities for GFF Files |
| rGhanaCensus | 2021 Ghana Population and Housing Census Results as Data Frames |
| rgho | Access WHO Global Health Observatory Data from R |
| RGIFT | Create Quizzes in GIFT Format |
| rgl | 3D Visualization Using OpenGL |
| rgl.cry | 'cry' and 'rgl' — Applications in Crystallography |
| rgl2gltf | Read and Write '.gltf' and '.glb' Files |
| rglobi | Interface to Global Biotic Interactions |
| Rglpk | R/GNU Linear Programming Kit Interface |
| rglplus | Extension of the 'rgl' 3D Visualization Package |
| rgm | Advanced Inference with Random Graphical Models |
| RGMM | Robust Mixture Model |
| RGN | Robust-Gauss Newton (RGN) Optimization of Sum-of-Squares Objective Function |
| rgnoisefilt | Elimination of Noisy Samples in Regression Datasets using Noise Filters |
| rgnparser | Parse Scientific Names |
| Rgof | 1d Goodness of Fit Tests |
| rgoogleads | Loading Data from 'Google Ads API' |
| RGoogleAnalyticsPremium | Unsampled Data in R for Google Analytics Premium Accounts |
| rgoogleclassroom | API Wrapper for Google Classroom and Google Forms |
| RGoogleFit | R Interface to Google Fit API |
| RgoogleMaps | Overlays on Static Maps |
| rgoogleslides | R Interface to Google Slides |
| rgplates | R Interface for the GPlates Web Service and Desktop Application |
| rgraph6 | Representing Graphs as 'graph6', 'digraph6' or 'sparse6' Strings |
| RGraphics | Data and Functions from the Book R Graphics, Third Edition |
| RGraphSpace | A Lightweight Interface Between 'ggplot2' and 'igraph' Objects |
| rgrass | Interface Between 'GRASS' Geographical Information System and 'R' |
| RGreenplum | Interface to 'Greenplum' Database |
| RGremlinsConjoint | Estimate the "Gremlins in the Data" Model for Conjoint Studies |
| rGroovy | Groovy Language Integration |
| rgsp | Repetitive Group Sampling Plan Based on Cpk |
| rgTest | Robust Graph-Based Two-Sample Test |
| rgtmx | Manage GTmetrix Tests in R |
| rgugik | Search and Retrieve Spatial Data from 'GUGiK' |
| rGV | Analysis of Continuous Glucose Monitor Data |
| rgw | Goodman-Weare Affine-Invariant Sampling |
| RH2 | DBI/RJDBC Interface to H2 Database |
| rhandsontable | Interface to the 'Handsontable.js' Library |
| RHawkes | Renewal Hawkes Process |
| RHclust | Vector in Partition |
| rhcoclust | Robust Hierarchical Co-Clustering to Identify Significant Co-Cluster |
| rheroicons | A Zero Dependency 'SVG' Icon Library for 'Shiny' |
| rhierbaps | Clustering Genetic Sequence Data Using the HierBAPS Algorithm |
| rhino | A Framework for Enterprise Shiny Applications |
| rhmc | Hamiltonian Monte Carlo |
| RHMS | Hydrologic Modelling System for R Users |
| rhnerm | Random Heteroscedastic Nested Error Regression |
| rhoneycomb | Analysis of Honeycomb Selection Designs |
| rhoR | Rho for Inter Rater Reliability |
| rhosa | Higher-Order Spectral Analysis |
| rhosp | Side Effect Risks in Hospital : Simulation and Estimation |
| RHPCBenchmark | Benchmarks for High-Performance Computing Environments |
| RhpcBLASctl | Control the Number of Threads on 'BLAS' |
| RHRT | Heart Rate Turbulence Analysis |
| RHRV | Heart Rate Variability Analysis of ECG Data |
| RHSDB | Ryan-Holm Step-Down Bonferroni or Sidak Procedure |
| rhub | Tools for R Package Developers |
| RHybridFinder | Identification of Hybrid Peptides in Immunopeptidomic Analyses |
| rhymer | Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words |
| rhype | Work with Hypergraphs in R |
| ri2 | Randomization Inference for Randomized Experiments |
| RI2by2 | Randomization Inference for Treatment Effects on a Binary Outcome |
| RIA | Radiomics Image Analysis Toolbox for Medial Images |
| riAFTBART | A Flexible Approach for Causal Inference with Multiple Treatments and Clustered Survival Outcomes |
| rib | An Implementation of 'Interactive Brokers' API |
| ribd | Pedigree-based Relatedness Coefficients |
| RIbench | Benchmark Suite for Indirect Methods for RI Estimation |
| rice | Radiocarbon Equations |
| ricegeneann | Gene Annotation of Rice (Oryza Sativa L.spp.japonica) |
| riceidconverter | Convert Biological ID from RAP or MSU to SYMBOL for Oryza Sativa |
| riceware | A Diceware Passphrase Implementation |
| Ricrt | Randomization Inference of Clustered Randomized Trials |
| ricu | Intensive Care Unit Data with R |
| rid | Multiple Change-Point Detection in Multivariate Time Series |
| RIdeogram | Drawing SVG Graphics to Visualize and Map Genome-Wide Data on Idiograms |
| ridge | Ridge Regression with Automatic Selection of the Penalty Parameter |
| ridgetorus | PCA on the Torus via Density Ridges |
| ridgregextra | Ridge Regression Parameter Estimation |
| ridigbio | Interface to the iDigBio Data API |
| ridittools | Useful Functions for Ridit Analysis |
| riem | Accesses Weather Data from the Iowa Environment Mesonet |
| Riemann | Learning with Data on Riemannian Manifolds |
| RiemBase | Functions and C++ Header Files for Computation on Manifolds |
| Riex | IEX Stocks and Market Data |
| rifle | Sparse Generalized Eigenvalue Problem |
| rifreg | Estimate Recentered Influence Function Regression |
| RIFS | Random Iterated Function System |
| Rigma | Access to the 'Figma' API |
| rigr | Regression, Inference, and General Data Analysis Tools in R |
| riingo | An R Interface to the 'Tiingo' Stock Price API |
| Rilostat | ILO Open Data via Ilostat Bulk Download Facility |
| rim | Interface to 'Maxima', Enabling Symbolic Computation |
| RImageJROI | Read and Write 'ImageJ' Region of Interest (ROI) Files |
| RImagePalette | Extract the Colors from Images |
| RImpact | Calculates Measures of Scholarly Impact |
| rimu | Responses in Multiplex |
| rinat | Access 'iNaturalist' Data Through APIs |
| rineq | Concentration Index and Decomposition for Health Inequalities |
| ring | Circular / Ring Buffers |
| ringostat | Load Data from 'Ringostat API' |
| RInno | An Installation Framework for Shiny Apps |
| RInside | C++ Classes to Embed R in C++ (and C) Applications |
| RInSp | R Individual Specialization |
| rintcal | Radiocarbon Calibration Curves |
| rIntervalTree | An Interval Tree Tool for Real Numbers |
| rintimg | View Images on Full Screen in 'RMarkdown' Documents and 'shiny' Applications |
| rintrojs | Wrapper for the 'Intro.js' Library |
| rio | A Swiss-Army Knife for Data I/O |
| rioja | Analysis of Quaternary Science Data |
| rioplot | Turn a Regression Model Inside Out |
| ripc | Download and Tidy IPC and CH Data |
| ripserr | Calculate Persistent Homology with Ripser-Based Engines |
| rirods | R Client for 'iRODS' |
| Rirt | Data Analysis and Parameter Estimation Using Item Response Theory |
| RISCA | Causal Inference and Prediction in Cohort-Based Analyses |
| rise | Conduct RISE Analysis |
| rIsing | High-Dimensional Ising Model Selection |
| Risk | Computes 26 Financial Risk Measures for Any Continuous Distribution |
| riskclustr | Functions to Study Etiologic Heterogeneity |
| riskCommunicator | G-Computation to Estimate Interpretable Epidemiological Effects |
| RiskMap | Geo-Statistical Modeling of Spatially Referenced Data |
| riskmetric | Risk Metrics to Evaluating R Packages |
| riskParityPortfolio | Design of Risk Parity Portfolios |
| RiskPortfolios | Computation of Risk-Based Portfolios |
| riskPredictClustData | Assessing Risk Predictions for Clustered Data |
| riskRegression | Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks |
| risks | Estimate Risk Ratios and Risk Differences using Regression |
| riskscores | Optimized Integer Risk Score Models |
| RiskScorescvd | Cardiovascular Risk Scores Calculator |
| risksetROC | Riskset ROC Curve Estimation from Censored Survival Data |
| riskSimul | Risk Quantification for Stock Portfolios under the T-Copula Model |
| riskyr | Rendering Risk Literacy more Transparent |
| RISmed | Download Content from NCBI Databases |
| Rita | Automated Transformations, Normality Testing, and Reporting |
| Ritc | Isothermal Titration Calorimetry (ITC) Data Analysis |
| RITCH | R Parser for the ITCH-Protocol |
| ritis | Integrated Taxonomic Information System Client |
| RItools | Randomization Inference Tools |
| riv | Robust Instrumental Variables Estimator |
| RiverBuilder | River Generation for Given Data Sets |
| riverconn | Fragmentation and Connectivity Indices for Riverscapes |
| riverdist | River Network Distance Computation and Applications |
| rivernet | Read, Analyze and Plot River Networks |
| Rivivc | In Vitro in Vivo Correlation Linear Level "A" |
| rivnet | Extract and Analyze Rivers from Elevation Data |
| rivr | Steady and Unsteady Open-Channel Flow Computation |
| RivRetrieve | Retrieve Global River Gauge Data |
| rix | Reproducible Data Science Environments with 'Nix' |
| rjade | A Clean, Whitespace-Sensitive Template Language for Writing HTML |
| rjaf | Regularized Joint Assignment Forest with Treatment Arm Clustering |
| RJafroc | Artificial Intelligence Systems and Observer Performance |
| rjags | Bayesian Graphical Models using MCMC |
| RJalaliDate | Handling Jalali Date (Persian / Solar Hijri) |
| rJava | Low-Level R to Java Interface |
| rJavaEnv | 'Java' Environments for R Projects |
| RJcluster | A Fast Clustering Algorithm for High Dimensional Data Based on the Gram Matrix Decomposition |
| RJDBC | Provides Access to Databases Through the JDBC Interface |
| RJDemetra | Interface to 'JDemetra+' Seasonal Adjustment Software |
| rjdmarkdown | 'rmarkdown' Extension for Formatted 'RJDemetra' Outputs |
| rjdqa | Quality Assessment for Seasonal Adjustment |
| rjdworkspace | Manipulate 'JDemetra+' Workspaces |
| rje | Miscellaneous Useful Functions for Statistics |
| rjmcmc | Reversible-Jump MCMC Using Post-Processing |
| rjqpd | The Johnson Quantile-Parameterised Distribution |
| RJSDMX | R Interface to SDMX Web Services |
| rjson | JSON for R |
| rjsoncons | Query, Pivot, Patch, and Validate 'JSON' and 'NDJSON' |
| RJSONIO | Serialize R Objects to JSON, JavaScript Object Notation |
| RJSplot | Interactive Graphs with R |
| rjstat | Handle 'JSON-stat' Format in R |
| rjtools | Preparing, Checking, and Submitting Articles to the 'R Journal' |
| rjwsacruncher | Interface to the 'JWSACruncher' of 'JDemetra+' |
| rkafkajars | External Jars Required for Package 'rkafka' |
| RKEA | R/KEA Interface |
| RKEAjars | R/KEA Interface Jars |
| RKEEL | Using 'KEEL' in R Code |
| RKEELdata | Datasets from 'KEEL' for it Use in 'RKEEL' |
| RKelly | Translate Odds and Probabilities |
| rKenyaForex | Historical Data for Kenya Foreign Exchange Prices |
| RKHSMetaMod | Ridge Group Sparse Optimization Problem for Estimation of a Meta Model Based on Reproducing Kernel Hilbert Spaces |
| rKIN | (Kernel) Isotope Niche Estimation |
| RkMetrics | Hybrid Mortality Estimation |
| rKolada | Access Data from the 'Kolada' Database |
| rKOMICS | Minicircle Sequence Classes (MSC) Analyses |
| RKorAPClient | 'KorAP' Web Service Client Package |
| rkriging | Kriging Modeling |
| rkt | Mann-Kendall Test, Seasonal and Regional Kendall Tests |
| RKUM | Robust Kernel Unsupervised Methods |
| rkvo | Read Key/Value Pair Observations |
| Rlab | Functions and Datasets Required for ST370 Class |
| Rlabkey | Data Exchange Between R and 'LabKey' Server |
| rLakeAnalyzer | Lake Physics Tools |
| rlandfire | Interface to 'LANDFIRE Product Service' API |
| rlang | Functions for Base Types and Core R and 'Tidyverse' Features |
| rlas | Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data |
| rlc | Create Interactive Linked Charts with Minimal Code |
| rlcv | Robust Likelihood Cross Validation Bandwidth Selection |
| rLDCP | Text Generation from Data |
| rle | Common Functions for Run-Length Encoded Vectors |
| RLeafAngle | Estimates, Plots and Evaluates Leaf Angle Distribution Functions, Calculates Extinction Coefficients |
| rleafmap | Interactive Maps with R and Leaflet |
| rlecuyer | R Interface to RNG with Multiple Streams |
| rlemon | R Access to LEMON Graph Algorithms |
| rless | Leaner Style Sheets |
| rlfsm | Simulations and Statistical Inference for Linear Fractional Stable Motions |
| rLFT | Processing Linear Features |
| Rlgt | Bayesian Exponential Smoothing Models with Trend Modifications |
| Rlibeemd | Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN) |
| Rlibkdv | A Versatile Kernel Density Visualization Library for Geospatial Analytics (Heatmap) |
| rlibkriging | Kriging Models using the 'libKriging' Library |
| rliger | Linked Inference of Genomic Experimental Relationships |
| Rlinkedin | Access to the LinkedIn API via R |
| rlinkedinads | Load Data from 'Linkedin Advertising API' |
| Rlinsolve | Iterative Solvers for (Sparse) Linear System of Equations |
| rlist | A Toolbox for Non-Tabular Data Manipulation |
| rlistings | Clinical Trial Style Data Readout Listings |
| rllama | Access and Analyze Data from 'DeFiLlama' |
| rlmDataDriven | Robust Regression with Data Driven Tuning Parameter |
| rlme | Rank-Based Estimation and Prediction in Random Effects Nested Models |
| Rlof | R Parallel Implementation of Local Outlier Factor(LOF) |
| rlog | A Simple, Opinionated Logging Utility |
| RLogicalOps | Process Logical Operations |
| RLoptimal | Optimal Adaptive Allocation Using Deep Reinforcement Learning |
| RLRsim | Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive Models |
| RLT | Reinforcement Learning Trees |
| rLTP | R Interface to the 'LTP'-Cloud Service |
| RLumCarlo | Monte-Carlo Methods for Simulating Luminescence Phenomena |
| RLumModel | Solving Ordinary Differential Equations to Understand Luminescence |
| RLumShiny | 'Shiny' Applications for the R Package 'Luminescence' |
| rly | Tools to Create Formal Language Parser |
| RM.weights | Weighted Rasch Modeling and Extensions using Conditional Maximum Likelihood |
| RM2006 | RiskMetrics 2006 Methodology |
| rma.exact | Exact Confidence Intervals for Random Effects Meta-Analyses |
| rmacrostrat | Fetch Geologic Data from the 'Macrostrat' Platform |
| RMaCzek | Czekanowski's Diagrams |
| rmake | Makefile Generator for R Analytical Projects |
| RMallow | Fit Multi-Modal Mallows' Models to Ranking Data |
| Rmalschains | Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) |
| rmapshaper | Client for 'mapshaper' for 'Geospatial' Operations |
| rmapzen | Client for 'Mapzen' and Related Map APIs |
| rmarchingcubes | Calculate 3D Contour Meshes Using the Marching Cubes Algorithm |
| rmargint | Robust Marginal Integration Procedures |
| RMariaDB | Database Interface and MariaDB Driver |
| RmarineHeatWaves | Detect Marine Heat Waves and Marine Cold Spells |
| RMark | R Code for Mark Analysis |
| rmarkdown | Dynamic Documents for R |
| rmass2 | Repeated Measures with Attrition: Sample Sizes and Power Levels for 2 Groups |
| RMAT | Random Matrix Analysis Toolkit |
| rmatio | Read and Write 'Matlab' Files |
| RMAWGEN | Multi-Site Auto-Regressive Weather GENerator |
| rmBayes | Performing Bayesian Inference for Repeated-Measures Designs |
| RMBC | Robust Model Based Clustering |
| RMCC | Airborne LiDAR Filtering Method Based on Multiscale Curvature |
| rmcfs | The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery |
| rmcorr | Repeated Measures Correlation |
| rmda | Risk Model Decision Analysis |
| RmdConcord | Concordances for 'R Markdown' |
| rmdfiltr | 'Lua'-Filters for R Markdown |
| rmdformats | HTML Output Formats and Templates for 'rmarkdown' Documents |
| rmdHelpers | Helper Functions for Rmd Documents |
| rmdl | Language to Manage Many Models |
| rmdpartials | Partial 'rmarkdown' Documents to Prettify your Reports |
| rmdplugr | Plugins for R Markdown Formats |
| rmdwc | Count Words, Chars and Non-Whitespace Chars in R Markdown Docs |
| rMEA | Synchrony in Motion Energy Analysis (MEA) Time-Series |
| RmecabKo | An 'Rcpp' Interface for Eunjeon Project |
| RMediation | Mediation Analysis Confidence Intervals |
| rmerec | MEREC - Method Based on the Removal Effects of Criteria |
| rmeta | Meta-Analysis |
| rmetalog | The Metalog Distribution |
| rmfanova | Repeated Measures Functional Analysis of Variance |
| rmgarch | Multivariate GARCH Models |
| rmi | Mutual Information Estimators |
| rMIDAS | Multiple Imputation with Denoising Autoencoders |
| rminer | Data Mining Classification and Regression Methods |
| rminizinc | R Interface to 'MiniZinc' |
| rminqa | Derivative-Free Optimization in R using C++ |
| rmio | Provides 'mio' C++11 Header Files |
| Rmisc | Ryan Miscellaneous |
| Rmixmod | Classification with Mixture Modelling |
| RMixpanel | API for Mixpanel |
| RMixtComp | Mixture Models with Heterogeneous and (Partially) Missing Data |
| RMixtCompIO | Minimal Interface of the C++ 'MixtComp' Library for Mixture Models with Heterogeneous and (Partially) Missing Data |
| RMixtCompUtilities | Utility Functions for 'MixtComp' Outputs |
| RMKdiscrete | Sundry Discrete Probability Distributions |
| RMLPCA | Maximum Likelihood Principal Component Analysis |
| RMM | Revenue Management Modeling |
| RMOA | Connect R with MOA for Massive Online Analysis |
| RMOAjars | External jars Required for Package RMOA |
| Rmodule | Automated Markov Chain Monte Carlo for Arbitrarily Structured Correlation Matrices |
| Rmolt | Graphic Visualization of the Birds' Molt |
| Rmonize | Support Retrospective Harmonization of Data |
| rmoo | Multi-Objective Optimization in R |
| RMOPI | Risk Management and Optimization for Portfolio Investment |
| Rmosek | The R to MOSEK Optimization Interface |
| rMOST | Estimates Pareto-Optimal Solution for Hiring with 3 Objectives |
| rmp | Rounded Mixture Package |
| Rmpfr | Interface R to MPFR - Multiple Precision Floating-Point Reliable |
| Rmpi | Interface (Wrapper) to MPI (Message-Passing Interface) |
| RMPSH | Recursive Modified Pattern Search on Hyper-Rectangle |
| rmpw | Causal Mediation Analysis Using Weighting Approach |
| rMR | Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions |
| rms | Regression Modeling Strategies |
| rmsb | Bayesian Regression Modeling Strategies |
| RMSD | Refined Modified Stahel-Donoho Estimators for Outlier Detection |
| RMSDp | Refined Modified Stahel-Donoho (MSD) Estimators for Outlier Detection (Parallel Version) |
| rmsfact | Amazing Random Facts About the World's Greatest Hacker |
| rmsfuns | Quickly View Data Frames in 'Excel', Build Folder Paths and Create Date Vectors |
| RMSNumpress | 'Rcpp' Bindings to Native C++ Implementation of MS Numpress |
| RMSS | Robust Multi-Model Subset Selection |
| Rmst | Computerized Adaptive Multistage Testing |
| rmstBayespara | Bayesian Restricted Mean Survival Time for Cluster Effect |
| rmstcompsens | Comparing Restricted Mean Survival Time as Sensitivity Analysis |
| rmt | Restricted Mean Time in Favor of Treatment |
| RMT4DS | Computation of Random Matrix Models |
| RMThreshold | Signal-Noise Separation in Random Matrices by using Eigenvalue Spectrum Analysis |
| RMTL | Regularized Multi-Task Learning |
| RMTstat | Distributions, Statistics and Tests Derived from Random Matrix Theory |
| rMultiNet | Multi-Layer Networks Analysis |
| rmumps | Wrapper for MUMPS Library |
| rmutil | Utilities for Nonlinear Regression and Repeated Measurements Models |
| RMVL | Mappable Vector Library for Handling Large Datasets |
| rMVP | Memory-Efficient, Visualize-Enhanced, Parallel-Accelerated GWAS Tool |
| rmweather | Tools to Conduct Meteorological Normalisation and Counterfactual Modelling for Air Quality Data |
| RMX | Rasch Models – eXtensions |
| RMySQL | Database Interface and 'MySQL' Driver for R |
| rmytarget | Load Data from 'MyTarget API v2 and v3' |
| rmzqc | Creation, Reading and Validation of 'mzqc' Files |
| rnaCrosslinkOO | Analysis of RNA Crosslinking Data |
| rnames | Recursive Display of Items in Nested Lists |
| RNAmf | Recursive Non-Additive Emulator for Multi-Fidelity Data |
| Rnanoflann | Extremely Fast Nearest Neighbor Search |
| RNAseqNet | Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation |
| RNAseqQC | Quality Control for RNA-Seq Data |
| rnassqs | Access Data from the NASS 'Quick Stats' API |
| rnaturalearth | World Map Data from Natural Earth |
| rnaturalearthdata | World Vector Map Data from Natural Earth Used in 'rnaturalearth' |
| RnavGraphImageData | Image Data Used in the Loon Package Demos |
| rnbp | Wrapper for the National Bank of Poland API |
| RNCBIEUtilsLibs | EUtils libraries for use in the R environment |
| RNCEP | Obtain, Organize, and Visualize NCEP Weather Data |
| rncl | An Interface to the Nexus Class Library |
| RND | Risk Neutral Density Extraction Package |
| rNeighborGWAS | Testing Neighbor Effects in Marker-Based Regressions |
| rNeighborQTL | Interval Mapping for Quantitative Trait Loci Underlying Neighbor Effects |
| RNentropy | Entropy Based Method for the Detection of Significant Variation in Gene Expression Data |
| rneos | XML-RPC Interface to NEOS |
| Rnest | Next Eigenvalue Sufficiency Test |
| rnetcarto | Fast Network Modularity and Roles Computation by Simulated Annealing (Rgraph C Library Wrapper for R) |
| RNetCDF | Interface to 'NetCDF' Datasets |
| RNetLogo | Provides an Interface to the Agent-Based Modelling Platform 'NetLogo' |
| RNewsflow | Tools for Comparing Text Messages Across Time and Media |
| RNeXML | Semantically Rich I/O for the 'NeXML' Format |
| RNGforGPD | Random Number Generation for Generalized Poisson Distribution |
| rngtools | Utility Functions for Working with Random Number Generators |
| rngWELL | Toolbox for WELL Random Number Generators |
| RNHANES | Facilitates Analysis of CDC NHANES Data |
| RNifti | Fast R and C++ Access to NIfTI Images |
| RNiftyReg | Image Registration Using the 'NiftyReg' Library |
| Rnightly | A Wrapper of the 'JavaScript' Library 'Nightly' |
| rnmamod | Bayesian Network Meta-Analysis with Missing Participants |
| Rnmr1D | Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra |
| rnn | Recurrent Neural Network |
| rnndescent | Nearest Neighbor Descent Method for Approximate Nearest Neighbors |
| rnnmf | Regularized Non-Negative Matrix Factorization |
| rNOMADS | An R Interface to the NOAA Operational Model Archive and Distribution System |
| RNOmni | Rank Normal Transformation Omnibus Test |
| rnpn | Interface to the National 'Phenology' Network 'API' |
| rnr | Rosenbaum and Rubin Sensitivity |
| rnrfa | UK National River Flow Archive Data from R |
| Rnumerai | Interface to the Numerai Machine Learning Tournament API |
| Rnvd3 | An Incomplete Wrapper of the 'nvd3' JavaScript Library |
| roadoi | Find Free Versions of Scholarly Publications via Unpaywall |
| roads | Road Network Projection |
| roahd | Robust Analysis of High Dimensional Data |
| ROAuth | R Interface For OAuth |
| RobAStBase | Robust Asymptotic Statistics |
| RobAStRDA | Interpolation Grids for Packages of the 'RobASt' - Family of Packages |
| robber | Using Block Model to Estimate the Robustness of Ecological Network |
| robCompositions | Compositional Data Analysis |
| robcor | Robust Correlations |
| roben | Robust Bayesian Variable Selection for Gene-Environment Interactions |
| RobExtremes | Optimally Robust Estimation for Extreme Value Distributions |
| robfilter | Robust Time Series Filters |
| robflreg | Robust Functional Linear Regression |
| RobGARCHBoot | Robust Bootstrap Forecast Densities for GARCH Models |
| robin | ROBustness in Network |
| RobinCar | Robust Inference for Covariate Adjustment in Randomized Clinical Trials |
| RobinHood | Interface for the RobinHood.com No Commission Investing Platform |
| robis | Ocean Biodiversity Information System (OBIS) Client |
| RobKF | Innovative and/or Additive Outlier Robust Kalman Filtering |
| RobLox | Optimally Robust Influence Curves and Estimators for Location and Scale |
| RobLoxBioC | Infinitesimally Robust Estimators for Preprocessing -Omics Data |
| RoBMA | Robust Bayesian Meta-Analyses |
| robmed | (Robust) Mediation Analysis |
| robmedExtra | Extra Functionality for (Robust) Mediation Analysis |
| robmixglm | Robust Generalized Linear Models (GLM) using Mixtures |
| RobMixReg | Robust Mixture Regression |
| robnptests | Robust Nonparametric Two-Sample Tests for Location/Scale |
| roboBayes | Robust Online Bayesian Monitoring |
| robomit | Robustness Checks for Omitted Variable Bias |
| robotoolbox | Client for the 'KoboToolbox' API |
| robotstxt | A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker |
| RobPer | Robust Periodogram and Periodicity Detection Methods |
| robreg3S | Three-Step Regression and Inference for Cellwise and Casewise Contamination |
| robregcc | Robust Regression with Compositional Covariates |
| RobRegression | Robust Multivariate Regression |
| RoBSA | Robust Bayesian Survival Analysis |
| robsel | Robust Selection Algorithm |
| robservable | Import an Observable Notebook as HTML Widget |
| robslopes | Fast Algorithms for Robust Slopes |
| RobStatTM | Robust Statistics: Theory and Methods |
| robStepSplitReg | Robust Stepwise Split Regularized Regression |
| robsurvey | Robust Survey Statistics Estimation |
| RoBTT | Robust Bayesian T-Test |
| robumeta | Robust Variance Meta-Regression |
| robust | Port of the S+ "Robust Library" |
| robust2sls | Outlier Robust Two-Stage Least Squares Inference and Testing |
| RobustAFT | Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case |
| RobustANOVA | Robust One-Way ANOVA Tests under Heteroscedasticity and Nonnormality |
| robustarima | Robust ARIMA Modeling |
| robustbase | Basic Robust Statistics |
| RobustBayesianCopas | Robust Bayesian Copas Selection Model |
| robustbetareg | Robust Beta Regression |
| RobustBF | Robust Solution to the Behrens-Fisher Problem |
| robustBLME | Robust Bayesian Linear Mixed-Effects Models using ABC |
| RobustCalibration | Robust Calibration of Imperfect Mathematical Models |
| robustcov | Collection of Robust Covariance and (Sparse) Precision Matrix Estimators |
| robustDA | Robust Mixture Discriminant Analysis |
| robusTest | Calibrated Correlation and Two-Sample Tests |
| robustETM | Robust Methods using Exponential Tilt Model |
| robustfa | Object Oriented Solution for Robust Factor Analysis |
| RobustGaSP | Robust Gaussian Stochastic Process Emulation |
| robustHD | Robust Methods for High-Dimensional Data |
| RobustIV | Robust Instrumental Variable Methods in Linear Models |
| RobustLinearReg | Robust Linear Regressions |
| robustlm | Robust Variable Selection with Exponential Squared Loss |
| robustlmm | Robust Linear Mixed Effects Models |
| robustmatrix | Robust Matrix-Variate Parameter Estimation |
| robustmeta | Robust Inference for Meta-Analysis with Influential Outlying Studies |
| RobustPrediction | Robust Tuning and Training for Cross-Source Prediction |
| robustrank | Robust Rank-Based Tests |
| RobustRankAggreg | Methods for Robust Rank Aggregation |
| robustrao | An Extended Rao-Stirling Diversity Index to Handle Missing Data |
| robustreg | Robust Regression Functions |
| robustsae | Robust Bayesian Small Area Estimation |
| robustsur | Robust Estimation for Seemingly Unrelated Regression Models |
| robustvarComp | Robust Estimation of Variance Component Models |
| robustX | 'eXtra' / 'eXperimental' Functionality for Robust Statistics |
| robvis | Visualize the Results of Risk-of-Bias (ROB) Assessments |
| Robyn | Semi-Automated Marketing Mix Modeling (MMM) from Meta Marketing Science |
| ROCaggregator | Aggregate Multiple ROC Curves into One Global ROC |
| rocbc | Statistical Inference for Box-Cox Based Receiver Operating Characteristic Curves |
| rocc | ROC Based Classification |
| roccv | ROC for Cross Validation Results |
| rOCEAN | Two-Way Feature Set Testing for Multi-Omics |
| ROCFTP.MMS | Perfect Sampling |
| ROCit | Performance Assessment of Binary Classifier with Visualization |
| rock | Reproducible Open Coding Kit |
| rockchalk | Regression Estimation and Presentation |
| rocker | Database Interface Class |
| ROCket | Simple and Fast ROC Curves |
| RockFab | Rock Fabric and Strain Analysis Tools |
| rockr | 'Rock' R Server Client |
| roclang | Functions for Diffusing Function Documentations into 'Roxygen' Comments |
| rocNIT | Non-Inferiority Test for Paired ROC Curves |
| rocnp | Work with Romanian Personal Numeric Codes PNC / CNP |
| ROCnReg | ROC Curve Inference with and without Covariates |
| rococo | Robust Rank Correlation Coefficient and Test |
| ROCpsych | Compute and Compare Diagnostic Test Statistics Across Groups |
| ROCR | Visualizing the Performance of Scoring Classifiers |
| ROCSI | Receiver Operating Characteristic Based Signature Identification |
| ROCsurf | ROC Surface Analysis Under the Three-Class Problems |
| rocsvm.path | The Entire Solution Paths for ROC-SVM |
| rocTree | Receiver Operating Characteristic (ROC)-Guided Classification and Survival Tree |
| RODBC | ODBC Database Access |
| RODBCDBI | Provides Access to Databases Through the ODBC Interface |
| rodd | Optimal Discriminating Designs |
| rODE | Ordinary Differential Equation (ODE) Solvers Written in R Using S4 Classes |
| rodeo | A Code Generator for ODE-Based Models |
| rofanova | Robust Functional Analysis of Variance |
| roger | Automated Grading of R Scripts |
| Rogue | Identify Rogue Taxa in Sets of Phylogenetic Trees |
| ROI | R Optimization Infrastructure |
| ROI.models.globalOptTests | 'ROI' Optimization Problems Based on 'globalOptTests' |
| ROI.models.miplib | 'ROI' Access to 'MIPLIB' 2010 Benchmark Instances |
| ROI.models.netlib | 'ROI' Optimization Problems Based on 'NETLIB-LP' |
| ROI.plugin.alabama | 'alabama' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.clarabel | 'clarabel' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.cplex | ROI Plug-in CPLEX |
| ROI.plugin.deoptim | 'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization Interface |
| ROI.plugin.ecos | 'ECOS' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.glpk | 'ROI' Plug-in 'GLPK' |
| ROI.plugin.highs | 'HiGHS' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.ipop | 'ipop' Plug-in for the 'R' Optimization Interface |
| ROI.plugin.lpsolve | 'lp_solve' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.msbinlp | 'Multi-Solution' Binary Linear Problem Plug-in for the 'R' Optimization Interface |
| ROI.plugin.neos | 'NEOS' Plug-in for the 'R' Optimization Interface |
| ROI.plugin.nloptr | 'nloptr' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.optimx | 'optimx' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.osqp | 'osqp' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.qpoases | 'qpOASES' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.quadprog | 'quadprog' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.scs | 'SCS' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.symphony | 'SYMPHONY' Plug-in for the 'R' Optimization Interface |
| rolap | Obtaining Star Databases from Flat Tables |
| roll | Rolling and Expanding Statistics |
| rollama | Communicate with 'Ollama' |
| rollbar | Error Tracking and Logging |
| rolldown | R Markdown Output Formats for Storytelling |
| rollinglda | Construct Consistent Time Series from Textual Data |
| rollmatch | Rolling Entry Matching |
| rollup | A Tidy Grouping Set Aggregation |
| roloc | Convert Colour Specification to Colour Name |
| rolocISCCNBS | A Colour List and Colour Metric Based on the ISCC-NBS System of Color Designation |
| rolog | Query 'SWI'-'Prolog' from R |
| ROlogit | Fit Rank-Ordered Logit (RO-Logit) Model |
| rolr | Finding Optimal Three-Group Splits Based on a Survival Outcome |
| RolWinMulCor | Subroutines to Estimate Rolling Window Multiple Correlation |
| RolWinWavCor | Estimate Rolling Window Wavelet Correlation Between Two Time Series |
| ROMDB | Get 'OMDB' API Multiple Information |
| romic | R for High-Dimensional Omic Data |
| RonFHIR | Read and Search Interface to the 'HL7 FHIR' REST API |
| Rook | HTTP Web Server for R |
| ROOPSD | R Object Oriented Programming for Statistical Distribution |
| roots | Reconstructing Ordered Ontogenic Trajectories |
| RootsExtremaInflections | Finds Roots, Extrema and Inflection Points of a Curve |
| rootSolve | Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations |
| rope | Model Selection with FDR Control of Selected Variables |
| ropenblas | Download, Compile and Link 'OpenBLAS' Library with R |
| ROpenCVLite | Helper Package for Installing OpenCV with R |
| ropendata | Query and Download 'Rapid7' 'Cybersecurity' Data Sets |
| ROpenDota | Access OpenDota Services in R |
| ROpenFIGI | R Interface to OpenFIGI |
| ropenmeteo | Wrappers for 'Open-Meteo' API |
| ropensecretsapi | R Package for the OpenSecrets.org API |
| ROpenWeatherMap | R Interface to OpenWeatherMap API |
| roperators | Additional Operators to Help you Write Cleaner R Code |
| ropercenter | Reproducible Data Retrieval from the Roper Center Data Archive |
| Ropj | Import Origin(R) Project Files |
| ROptEst | Optimally Robust Estimation |
| roptim | General Purpose Optimization in R using C++ |
| ROptimus | A Parallel General-Purpose Adaptive Optimisation Engine |
| roptions | Option Strategies and Valuation |
| ROptSpace | Matrix Reconstruction from a Few Entries |
| ROracle | OCI Based Oracle Database Interface for R |
| rorcid | Interface to the 'Orcid.org' API |
| rorqual.morpho | Morphological Allometry of Rorquals |
| ROSE | Random Over-Sampling Examples |
| Rosenbrock | Extended Rosenbrock-Type Densities for Markov Chain Monte Carlo (MCMC) Sampler Benchmarking |
| roseRF | ROSE Random Forests for Robust Semiparametric Efficient Estimation |
| rosetta | Parallel Use of Statistical Packages in Teaching |
| rosetteApi | 'Rosette' API |
| rosm | Plot Raster Map Tiles from Open Street Map and Other Sources |
| rosmium | Bindings for 'Osmium Tool' |
| rospca | Robust Sparse PCA using the ROSPCA Algorithm |
| rosv | Client to Access and Operate on the 'Open Source Vulnerability' API |
| rotasym | Tests for Rotational Symmetry on the Hypersphere |
| rotationForest | Fit and Deploy Rotation Forest Models |
| rotations | Working with Rotation Data |
| rotatogram | A Non-Axis-Dominant Association Plotting Tool |
| rotl | Interface to the 'Open Tree of Life' API |
| rotor | Log Rotation and Conditional Backups |
| roughnet | Visualize Networks using 'roughjs' |
| RoughSets | Data Analysis Using Rough Set and Fuzzy Rough Set Theories |
| roughsf | Visualize Spatial Data using 'roughjs' |
| round | Rounding to Decimal Digits |
| RoundAndRound | Plot Objects Moving in Orbits |
| roundhouse | Random Chuck Norris Facts |
| roundwork | Rounding Infrastructure |
| roundyh | Round Dataframe |
| Routliers | Robust Outliers Detection |
| routr | A Simple Router for HTTP and WebSocket Requests |
| roxut | Document Unit Tests Roxygen-Style |
| roxygen2 | In-Line Documentation for R |
| roxygen2md | 'Roxygen' to 'Markdown' |
| roxyglobals | 'Roxygen2' Global Variable Declarations |
| roxylint | Lint 'roxygen2'-Generated Documentation |
| roxytest | Various Tests with 'roxygen2' |
| roxytypes | Typed Parameter Tags for Integration with 'roxygen2' |
| rPACI | Placido Analysis of Corneal Irregularity |
| rPackedBar | Packed Bar Charts with 'plotly' |
| rpact | Confirmatory Adaptive Clinical Trial Design and Analysis |
| Rpadrino | Interact with the 'PADRINO' IPM Database |
| rPAex | Automatic Detection of Experimental Unit in Precision Agriculture |
| rpaleoclim | Download Paleoclimate Data from 'PaleoClim' |
| RPANDA | Phylogenetic ANalyses of DiversificAtion |
| rpanel | Simple Interactive Controls for R using the 'tcltk' Package |
| rPanglaoDB | Download and Merge Single-Cell RNA-Seq Data from the PanglaoDB Database |
| rpart | Recursive Partitioning and Regression Trees |
| rpart.LAD | Least Absolute Deviation Regression Trees |
| rpart.plot | Plot 'rpart' Models: An Enhanced Version of 'plot.rpart' |
| rpartScore | Classification Trees for Ordinal Responses |
| RPatternJoin | String Similarity Joins for Hamming and Levenshtein Distances |
| rPBK | Inference and Prediction of Generic Physiologically-Based Kinetic Models |
| rpca | RobustPCA: Decompose a Matrix into Low-Rank and Sparse Components |
| Rpdb | Read, Write, Visualize and Manipulate PDB Files |
| rPDBapi | A Comprehensive Interface for Accessing the Protein Data Bank |
| RPDTest | A New Type of Test Statistic and Method for Multinomial Goodness-of-Fit Test |
| RpeakChrom | Tools for Chromatographic Column Characterization and Modelling Chromatographic Peak |
| RPEGLMEN | Gamma and Exponential Generalized Linear Models with Elastic Net Penalty |
| RPEIF | Computation and Plots of Influence Functions for Risk and Performance Measures |
| RPEnsemble | Random Projection Ensemble Classification |
| RPESE | Estimates of Standard Errors for Risk and Performance Measures |
| RPEXE.RPEXT | Reduced Piecewise Exponential Estimate/Test Software |
| rpf | Response Probability Functions |
| RPhosFate | Soil and Chemical Substance Emission and Transport Model |
| Rphylopars | Phylogenetic Comparative Tools for Missing Data and Within-Species Variation |
| rphylopic | Get Silhouettes of Organisms from PhyloPic |
| rpinterest | Access Pinterest API |
| rpivotTable | Build Powerful Pivot Tables and Dynamically Slice & Dice your Data |
| rplanes | Plausibility Analysis of Epidemiological Signals |
| rplotengine | R as a Plotting Engine |
| rpls | Robust Partial Least Squares |
| rplum | Bayesian Age-Depth Modelling of Cores Dated by Pb-210 |
| rpm | Modeling of Revealed Preferences Matchings |
| RPMG | Graphical User Interface (GUI) for Interactive R Analysis Sessions |
| RPMM | Recursively Partitioned Mixture Model |
| rpmodel | P-Model |
| rpms | Recursive Partitioning for Modeling Survey Data |
| rpnf | Point and Figure Package |
| Rpoet | 'PoetryDB' API Wrapper |
| RPointCloud | Visualizing Topological Loops and Voids |
| Rpolyhedra | Polyhedra Database |
| Rpoppler | PDF Tools Based on Poppler |
| rportfolio | Portfolio Theory |
| rpostgis | R Interface to a 'PostGIS' Database |
| RPostgres | C++ Interface to PostgreSQL |
| RPostgreSQL | R Interface to the 'PostgreSQL' Database System |
| rPowerSampleSize | Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate |
| RPPairwiseDesign | Resolvable partially pairwise balanced design and Space-filling design via association scheme |
| RPPanalyzer | Reads, Annotates, and Normalizes Reverse Phase Protein Array Data |
| RPPASPACE | Reverse-Phase Protein Array Super Position and Concentration Evaluation |
| rpql | Regularized PQL for Joint Selection in GLMMs |
| rPraat | Interface to Praat |
| rpredictit | Interface to the 'PredictIt' API |
| rPref | Database Preferences and Skyline Computation |
| RPregression | A Simple Regression and Plotting Tool |
| RPresto | DBI Connector to Presto |
| rprev | Estimating Disease Prevalence from Registry Data |
| rprime | Functions for Working with 'Eprime' Text Files |
| rprintf | Adaptive Builder for Formatted Strings |
| RprobitB | Bayesian Probit Choice Modeling |
| RProbSup | Calculates Probability of Superiority |
| Rprofet | WOE Transformation and Scorecard Builder |
| rprofile | Load Both User-Global and Project-Specific R Profile Configurations |
| rprojroot | Finding Files in Project Subdirectories |
| rprojtree | Create Folders and Files Structure for Data Science Projects |
| RProtoBuf | R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3) |
| RPscoring | Relative Placement Algorithm |
| rpsftm | Rank Preserving Structural Failure Time Models |
| RPtests | Goodness of Fit Tests for High-Dimensional Linear Regression Models |
| rptR | Repeatability Estimation for Gaussian and Non-Gaussian Data |
| RPublica | ProPublica API Client |
| RPushbullet | R Interface to the Pushbullet Messaging Service |
| rpyANTs | An Alternative Advanced Normalization Tools ('ANTs') |
| RPyGeo | ArcGIS Geoprocessing via Python |
| rpymat | Easy to Configure an Isolated 'Python' Environment |
| rqcanon | Canonical Quantile Regression |
| rQCC | Robust Quality Control Chart |
| rqdatatable | 'rquery' for 'data.table' |
| RQdeltaCT | Relative Quantification of Gene Expression using Delta Ct Methods |
| RQEntangle | Quantum Entanglement of Bipartite System |
| rqlm | Modified Poisson and Least-Squares Regressions for Binary Outcome |
| rqPen | Penalized Quantile Regression |
| rQSAR | QSAR Modeling with Multiple Algorithms: MLR, PLS, and Random Forest |
| rqti | Create Tests According to QTI 2.1 Standard |
| Rquake | Seismic Hypocenter Determination |
| RQuantLib | R Interface to the 'QuantLib' Library |
| Rquefts | Quantitative Evaluation of the Native Fertility of Tropical Soils |
| rquery | Relational Query Generator for Data Manipulation at Scale |
| rquest | Hypothesis Tests for Quantiles and Quantile-Based Measures |
| rr | Statistical Methods for the Randomized Response Technique |
| rr2 | R2s for Regression Models |
| Rramas | Matrix Population Models |
| rrandvec | Generate Random Vectors Whose Components Sum Up to One |
| rrapply | Revisiting Base Rapply |
| rrat | Robust Regression with Asymmetric Heavy-Tail Noise Distributions |
| RRate | Estimating Replication Rate for Genome-Wide Association Studies |
| Rraven | Connecting R and 'Raven' Sound Analysis Software |
| rrBLUP | Ridge Regression and Other Kernels for Genomic Selection |
| RRBoost | A Robust Boosting Algorithm |
| rrcov | Scalable Robust Estimators with High Breakdown Point |
| rrcov3way | Robust Methods for Multiway Data Analysis, Applicable also for Compositional Data |
| rrcovHD | Robust Multivariate Methods for High Dimensional Data |
| rrcovNA | Scalable Robust Estimators with High Breakdown Point for Incomplete Data |
| Rrdap | RDAP Server Querying |
| rrecsys | Environment for Evaluating Recommender Systems |
| rredlist | 'IUCN' Red List Client |
| RRedshiftSQL | R Interface to the 'Redshift' Database |
| rrefine | r Client for OpenRefine API |
| rreg | Visualization for Norwegian Health Quality Registries |
| rrepast | Invoke 'Repast Simphony' Simulation Models |
| Rrepest | An Analyzer of International Large Scale Assessments in Education |
| rres | Realized Relatedness Estimation and Simulation |
| RRF | Regularized Random Forest |
| RRI | Residual Randomization Inference for Regression Models |
| rriskDistributions | Fitting Distributions to Given Data or Known Quantiles |
| rrMixture | Reduced-Rank Mixture Models |
| RRMLRfMC | Reduced-Rank Multinomial Logistic Regression for Markov Chains |
| RRNA | Secondary Structure Plotting for RNA |
| rrnni | Manipulate with RNNI Tree Space |
| rroad | Road Condition Analysis |
| rrpack | Reduced-Rank Regression |
| RRphylo | Phylogenetic Ridge Regression Methods for Comparative Studies |
| RRPP | Linear Model Evaluation with Randomized Residuals in a Permutation Procedure |
| rrr | Reduced-Rank Regression |
| RRreg | Correlation and Regression Analyses for Randomized Response Data |
| RRRR | Online Robust Reduced-Rank Regression Estimation |
| rrscale | Robust Re-Scaling to Better Recover Latent Effects in Data |
| rrtable | Reproducible Research with a Table of R Codes |
| RRTCS | Randomized Response Techniques for Complex Surveys |
| rrum | Bayesian Estimation of the Reduced Reparameterized Unified Model with Gibbs Sampling |
| RSA | Response Surface Analysis |
| RSADBE | Data related to the book "R Statistical Application Development by Example" |
| rsae | Robust Small Area Estimation |
| rSAFE | Surrogate-Assisted Feature Extraction |
| RSAGA | SAGA Geoprocessing and Terrain Analysis |
| Rsagacmd | Linking R with the Open-Source 'SAGA-GIS' Software |
| rsample | General Resampling Infrastructure |
| Rsampling | Ports the Workflow of "Resampling Stats" Add-in to R |
| rsat | Dealing with Multiplatform Satellite Images |
| RSAtools | Advanced Response Surface Analysis |
| rsatscan | Tools, Classes, and Methods for Interfacing with 'SaTScan' Stand-Alone Software |
| RSauceLabs | R Wrapper for 'SauceLabs' REST API |
| RSBJson | Handle R Requests from R Service Bus Applications with JSON Payloads |
| RSC | Robust and Sparse Correlation Matrix |
| rSCA | An R Package for Stepwise Cluster Analysis |
| RSCAT | Shadow-Test Approach to Computerized Adaptive Testing |
| rscc | R Source Code Similarity Evaluation by Variable/Function Names |
| RScelestial | Scelestial: Steiner Tree Based Single-Cell Lineage Tree Inference |
| RSclient | Client for Rserve |
| Rsconctdply | Deploys Multiple 'Shiny' Apps using Configuration File |
| rsconnect | Deploy Docs, Apps, and APIs to 'Posit Connect', 'shinyapps.io', and 'RPubs' |
| rscontract | Generic implementation of the 'RStudio' connections contract |
| rscopus | Scopus Database 'API' Interface |
| rscorecard | A Method to Download Department of Education College Scorecard Data |
| RSDA | R to Symbolic Data Analysis |
| rsdepth | Ray Shooting Depth (i.e. RS Depth) Functions for Bivariate Analysis |
| rSDI | Spatial Dispersion Index (SDI) Family of Metrics for Spatial/Geographic Networks |
| RSDK | Sudoku with R |
| rsdmx | Tools for Reading SDMX Data and Metadata |
| rsdNE | Response Surface Designs with Neighbour Effects (rsdNE) |
| RSE | Number of Newly Discovered Rare Species Estimation |
| rSEA | Simultaneous Enrichment Analysis |
| rseedcalc | Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing |
| RSEIS | Seismic Time Series Analysis Tools |
| RSelenium | R Bindings for 'Selenium WebDriver' |
| rsem | Robust Structural Equation Modeling with Missing Data and Auxiliary Variables |
| RSentiment | Analyse Sentiment of English Sentences |
| Rserve | Binary R server |
| rsetse | Strain Elevation Tension Spring Embedding |
| rsf | Report of Statistical Findings in 'bookdown' |
| rSFA | Slow Feature Analysis |
| Rsfar | Seasonal Functional Autoregressive Models |
| Rsgf | SGF (Smart Game File) File Format Import |
| RSGHB | Functions for Hierarchical Bayesian Estimation: A Flexible Approach |
| rSHAPE | Simulated Haploid Asexual Population Evolution |
| rshift | Paleoecology Functions for Regime Shift Analysis |
| rsi | Efficiently Retrieve and Process Satellite Imagery |
| rsides | SIDES-Based Subgroup Search Algorithms |
| RSiena | Siena - Simulation Investigation for Empirical Network Analysis |
| RsimMosaic | R Simple Image Mosaic Creation Library |
| rsimsum | Analysis of Simulation Studies Including Monte Carlo Error |
| rsinaica | Download Data from Mexico's Air Quality Information System |
| RSizeBiased | Hypothesis Testing Based on R-Size Biased Samples |
| RSKC | Robust Sparse K-Means |
| rskey | Create Custom 'Rstudio' Keyboard Shortcuts |
| rslp | A Stemming Algorithm for the Portuguese Language |
| rslurm | Submit R Calculations to a 'Slurm' Cluster |
| rsm | Response-Surface Analysis |
| RSmallTelescopes | Empirical Small Telescopes Analysis |
| RSmartlyIO | Loading Facebook and Instagram Advertising Data from 'Smartly.io' |
| rsmatch | Matching Methods for Time-Varying Observational Studies |
| rsmatrix | Matrices for Repeat-Sales Price Indexes |
| Rsmlx | R Speaks 'Monolix' |
| rsnell | Snell Scoring |
| RSNNS | Neural Networks using the Stuttgart Neural Network Simulator (SNNS) |
| rsocialwatcher | 'Facebook Marketing API' Social Watcher |
| RSocrata | Download or Upload 'Socrata' Data Sets |
| rsoi | Import Various Northern and Southern Hemisphere Climate Indices |
| Rsolnp | General Non-Linear Optimization |
| rsolr | R to Solr Interface |
| Rsomoclu | Somoclu |
| RSP | 'shiny' Applications for Statistical and Psychometric Analysis |
| rspa | Adapt Numerical Records to Fit (in)Equality Restrictions |
| rSPARCS | Sites, Population, and Records Cleaning Skills |
| rsparkling | R Interface for H2O Sparkling Water |
| rsparse | Statistical Learning on Sparse Matrices |
| Rspc | Nelson Rules for Control Charts |
| rSPDE | Rational Approximations of Fractional Stochastic Partial Differential Equations |
| RSpectra | Solvers for Large-Scale Eigenvalue and SVD Problems |
| rSpectral | Spectral Modularity Clustering |
| RSpincalc | Conversion Between Attitude Representations of DCM, Euler Angles, Quaternions, and Euler Vectors |
| rspiro | Implementation of Spirometry Equations |
| rspm | 'RStudio' Package Manager |
| Rspotify | Access to Spotify API |
| rsppfp | R's Shortest Path Problem with Forbidden Subpaths |
| rsprite2 | Identify Distributions that Match Reported Sample Parameters (SPRITE) |
| rsq | R-Squared and Related Measures |
| RSQL | Database Agnostic Package to Generate and Process 'SQL' Queries in R |
| RSQLite | SQLite Interface for R |
| RSqlParser | Parse 'SQL' Statements |
| RsqMed | Total Mediation Effect Size Measure for High-Dimensional Mediators |
| RSquaredMI | R-Squared with Multiply Imputed Data |
| rSRD | Sum of Ranking Differences Statistical Test |
| Rssa | A Collection of Methods for Singular Spectrum Analysis |
| RSSampling | Ranked Set Sampling |
| RsSimulx | Extension of 'lixoftConnectors' for 'Simulx' |
| RSSL | Implementations of Semi-Supervised Learning Approaches for Classification |
| RSSOP | Simulation of Supply Reservoir Systems using Standard Operation Policy |
| RSStest | Testing the Equality of Two Means Using RSS and MRSS |
| RSSthemes | RSS Palettes and Themes |
| rstac | Client Library for SpatioTemporal Asset Catalog |
| rstack | Stack Data Type as an 'R6' Class |
| rstackdeque | Persistent Fast Amortized Stack and Queue Data Structures |
| rstan | R Interface to Stan |
| rstanarm | Bayesian Applied Regression Modeling via Stan |
| rstanbdp | Bayesian Deming Regression for Method Comparison |
| rstanemax | Emax Model Analysis with 'Stan' |
| rstantools | Tools for Developing R Packages Interfacing with 'Stan' |
| RStata | A Bit of Glue Between R and Stata |
| rstatix | Pipe-Friendly Framework for Basic Statistical Tests |
| rstatscn | R Interface for China National Data |
| Rstg | STG : Feature Selection using STochastic Gates |
| rstiefel | Random Orthonormal Matrix Generation and Optimization on the Stiefel Manifold |
| RStoolbox | Remote Sensing Data Analysis |
| rstpm2 | Smooth Survival Models, Including Generalized Survival Models |
| rStrava | Access the 'Strava' API |
| rstream | Streams of Random Numbers |
| rstudio.prefs | Set 'RStudio' Preferences |
| rstudioapi | Safely Access the RStudio API |
| rsubgroup | Subgroup Discovery and Analytics |
| rsurface | Design of Rotatable Central Composite Experiments and Response Surface Analysis |
| Rsurrogate | Robust Estimation of the Proportion of Treatment Effect Explained by Surrogate Marker Information |
| rsurv | Random Generation of Survival Data |
| RSurveillance | Design and Analysis of Disease Surveillance Activities |
| rsurveycto | Interact with Data on 'SurveyCTO' |
| rsvd | Randomized Singular Value Decomposition |
| rsvddpd | Robust Singular Value Decomposition using Density Power Divergence |
| rsvg | Render SVG Images into PDF, PNG, (Encapsulated) PostScript, or Bitmap Arrays |
| rswipl | Embed 'SWI'-'Prolog' |
| Rsymphony | SYMPHONY in R |
| rsyncrosim | The R Interface to 'SyncroSim' |
| rsyntax | Extract Semantic Relations from Text by Querying and Reshaping Syntax |
| rsyslog | Interface to the 'syslog' System Logger |
| rt | Interface to the 'Request Tracker' API |
| rt.test | Robustified t-Test |
| rt3 | Tic-Tac-Toe Package for R |
| rTableICC | Random Generation of Contingency Tables |
| rtables | Reporting Tables |
| rtabulator | R Bindings for 'Tabulator JS' |
| Rtapas | Random Tanglegram Partitions |
| rtape | Manage and manipulate large collections of R objects stored as tape-like files |
| Rtauchen | Discretization of AR(1) Processes |
| RTaxometrics | Taxometric Analysis |
| RTCC | Detecting Trait Clustering in Environmental Gradients |
| rTCRBCRr | Repertoire Analysis of the Detected Clonotype |
| RTD | Simple TD API Client |
| RTDE | Robust Tail Dependence Estimation |
| rtdists | Response Time Distributions |
| rtematres | The rtematres API package |
| rtemps | R Templates for Reproducible Data Analyses |
| rTensor | Tools for Tensor Analysis and Decomposition |
| rTensor2 | MultiLinear Algebra |
| rTephra | Tephra Transport Modeling |
| rtern | A Ternary Conditional Operator for R |
| RTextTools | Automatic Text Classification via Supervised Learning |
| rtf | Rich Text Format (RTF) Output |
| RTFA | Robust Factor Analysis for Tensor Time Series |
| rTG | Methods to Analyse Seasonal Radial Tree Growth Data |
| rtgstat | Client for 'TGStat API' |
| Rthingsboard | 'ThingsBoard' API |
| rticles | Article Formats for R Markdown |
| rticulate | Ultrasound Tongue Imaging |
| rtiddlywiki | R Interface for 'TiddlyWiki' |
| rtide | Tide Heights |
| rties | Modeling Interpersonal Dynamics |
| RTIGER | HMM-Based Model for Genotyping and Cross-Over Identification |
| rtika | R Interface to 'Apache Tika' |
| rtiktoken | A Byte-Pair-Encoding (BPE) Tokenizer for OpenAI's Large Language Models |
| rtip | Inequality, Welfare and Poverty Indices and Curves using the EU-SILC Data |
| rtist | A Color Palette Generator |
| rtk | Rarefaction Tool Kit |
| rtkore | 'STK++' Core Library Integration to 'R' using 'Rcpp' |
| RTL | Risk Tool Library - Trading, Risk, 'Analytics' for Commodities |
| RTLknitr | Right to Left Dynamic Documents Using 'knitr' |
| rtlr | Print Right-to-Left Languages Correctly |
| rTLsDeep | Post-Hurricane Damage Severity Classification from TLS and AI |
| RTMB | 'R' Bindings for 'TMB' |
| rtmpt | Fitting (Exponential/Diffusion) RT-MPT Models |
| rtms | R Toolkit for Mass Spectrometry |
| Rtnmin | Truncated Newton Function Minimization with Bounds Constraints |
| rtodoist | Create and Manage Todolist using 'Todoist.com' API |
| rtoot | Collecting and Analyzing Mastodon Data |
| rtop | Interpolation of Data with Variable Spatial Support |
| rTorch | R Bindings to 'PyTorch' |
| rTPC | Fitting and Analysing Thermal Performance Curves |
| rtpcr | qPCR Data Analysis |
| Rtrack | Spatial Navigation Strategy Analysis |
| RTransferEntropy | Measuring Information Flow Between Time Series with Shannon and Renyi Transfer Entropy |
| rtrek | Data Analysis Relating to Star Trek |
| rtrend | Trend Estimating Tools |
| rtrends | Analyze Download Logs from the CRAN RStudio Mirror |
| RTriangle | Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator |
| rtrim | Trends and Indices for Monitoring Data |
| rTRIPLEXCWFlux | Carbon-Water Coupled Model |
| rTRNG | Advanced and Parallel Random Number Generation via 'TRNG' |
| Rtropical | Data Analysis Tools over Space of Phylogenetic Trees Using Tropical Geometry |
| rtry | Preprocessing Plant Trait Data |
| rts | Raster Time Series Analysis |
| rts2 | Real-Time Disease Surveillance |
| RTSA | 'Trial Sequential Analysis' for Error Control and Inference in Sequential Meta-Analyses |
| rtsdata | R Time Series Intelligent Data Storage |
| RtsEva | Performs the Transformed-Stationary Extreme Values Analysis |
| Rtsne | T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation |
| rtson | Typed JSON |
| rtsplot | Time Series Plot |
| Rttf2pt1 | 'ttf2pt1' Program |
| RTTWebClient | Web Client to 'TickTrader' |
| Rtumblr | Collecting and Analyzing 'Tumblr' Data |
| Rtwalk | The R Implementation of the 't-walk' MCMC Algorithm |
| rtweet | Collecting Twitter Data |
| rTwig | Realistic Quantitative Structure Models |
| Rtwobitlib | '2bit' 'C' Library |
| rtype | A strong type system for R |
| rtypeform | Interface to 'typeform' Results |
| rubias | Bayesian Inference from the Conditional Genetic Stock Identification Model |
| rucm | Implementation of Unobserved Components Model (UCM) |
| rucrdtw | R Bindings for the UCR Suite |
| rugarch | Univariate GARCH Models |
| ruijter | Technical Data Sets by Ruijter et al. (2013) |
| ruimtehol | Learn Text 'Embeddings' with 'Starspace' |
| ruin | Simulation of Various Risk Processes |
| ruler | Tidy Data Validation Reports |
| rules | Model Wrappers for Rule-Based Models |
| rUM | R Templates from the University of Miami |
| rumidas | Univariate GARCH-MIDAS, Double-Asymmetric GARCH-MIDAS and MEM-MIDAS |
| ruminate | A Pharmacometrics Data Transformation and Analysis Tool |
| runcharter | Automatically Plot, Analyse and Revises Limits of Multiple Run Charts |
| runDRT | Run Doubly Ranked Tests |
| runes | Convert Strings to Elder Futhark Runes |
| runexp | Softball Run Expectancy using Markov Chains and Simulation |
| RUnit | R Unit Test Framework |
| runjags | Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS |
| runMCMCbtadjust | Runs Monte Carlo Markov Chain - With Either 'JAGS', 'nimble' or 'greta' - While Adjusting Burn-in and Thinning Parameters |
| runner | Running Operations for Vectors |
| runonce | Run Once and Save Result |
| runstats | Fast Computation of Running Statistics for Time Series |
| Runuran | R Interface to the 'UNU.RAN' Random Variate Generators |
| rush | Rapid Parallel and Distributed Computing |
| rusk | Beautiful Graphical Representation of Multiplication Tables on a Modular Circle |
| rusquant | Quantitative Trading Framework |
| rust | Ratio-of-Uniforms Simulation with Transformation |
| rutifier | Chilean Rol Unico Tributario |
| rutledge | Real-Time PCR Data Sets by Rutledge et al. (2004) |
| ruv | Detect and Remove Unwanted Variation using Negative Controls |
| RVA | RNAseq Visualization Automation |
| RVAideMemoire | Testing and Plotting Procedures for Biostatistics |
| rvalues | R-Values for Ranking in High-Dimensional Settings |
| Rvcg | Manipulations of Triangular Meshes Based on the 'VCGLIB' API |
| rvcheck | R/Package Version Check |
| RVCompare | Compare Real Valued Random Variables |
| rvec | Vector Representing a Random Variable |
| Rveg | Digitization of Phytosociological Relevés |
| RVenn | Set Operations for Many Sets |
| RVerbalExpressions | Create Regular Expressions Easily |
| rversions | Query 'R' Versions, Including 'r-release' and 'r-oldrel' |
| rvertnet | Search 'Vertnet', a 'Database' of Vertebrate Specimen Records |
| rvest | Easily Harvest (Scrape) Web Pages |
| rvg | R Graphics Devices for 'Office' Vector Graphics Output |
| rvHPDT | Calling Haplotype-Based and Variant-Based Pedigree Disequilibrium Test for Rare Variants in Pedigrees |
| RViennaCL | 'ViennaCL' C++ Header Files |
| rviewgraph | Animated Graph Layout Viewer |
| rvif | Collinearity Detection using Redefined Variance Inflation Factor and Graphical Methods |
| rvinecopulib | High Performance Algorithms for Vine Copula Modeling |
| RVIpkg | Regional Vulnerability Index |
| rvisidata | Wrapper for 'Visidata', an Interactive Multitool for Tabular Data |
| rvkstat | R Interface to API 'vk.com' |
| rvmethod | Radial Velocity Method for Detecting Exoplanets |
| rvMF | Fast Generation of von Mises-Fisher Distributed Pseudo-Random Vectors |
| rwa | Perform a Relative Weights Analysis |
| rwalkr | API to Melbourne Pedestrian Data |
| rwarrior | R Warrior - An AI Programming Game |
| Rwave | Time-Frequency Analysis of 1-D Signals |
| rwavelet | Wavelet Analysis |
| rwc | Random Walk Covariance Models |
| Rwclust | Random Walk Clustering on Weighted Graphs |
| rWCVP | Generating Summaries, Reports and Plots from the World Checklist of Vascular Plants |
| RWDataPlyr | Read and Manipulate Data from 'RiverWare' |
| RweaveExtra | Sweave Drivers with Extra Tricks Up their Sleeve |
| rwebstat | Download Data from the Webstat API |
| RWeka | R/Weka Interface |
| RWekajars | R/Weka Interface Jars |
| rwfec | R Wireless, Forward Error Correction |
| RWgraph | Random Walks on Graphs Representing a Transactional Network |
| rwhatsapp | Import and Handling for 'WhatsApp' Chat Logs |
| Rwhois | WHOIS Server Querying |
| rwicc | Regression with Interval-Censored Covariates |
| RWiener | Wiener Process Distribution Functions |
| RWildbook | Interface for the 'Wildbook' Wildlife Data Management Framework |
| RWinEdt | R Interface to 'WinEdt' |
| rWishart | Random Wishart Matrix Generation |
| rwisp | WISP Multiple Criteria Sorting Method |
| RWmisc | Miscellaneous Spatial Functions |
| RWNN | Random Weight Neural Networks |
| Rwofost | WOFOST Crop Growth Simulation Model |
| rworkflows | Test, Document, Containerise, and Deploy R Packages |
| rworldmap | Mapping Global Data |
| rworldxtra | Country boundaries at high resolution |
| RWsearch | Lazy Search in R Packages, Task Views, CRAN, the Web. All-in-One Download |
| rwstats | Chinese Character Frequency in Real World |
| Rwtss | Client for Web Time-Series Service |
| rwty | R We There Yet? Visualizing MCMC Convergence in Phylogenetics |
| rwunderground | R Interface to Weather Underground API |
| RXKCD | Get XKCD Comic from R |
| RxnSim | Functions to Compute Chemical and Chemical Reaction Similarity |
| rxode2 | Facilities for Simulating from ODE-Based Models |
| rxode2ll | Log-Likelihood Functions for 'rxode2' |
| rxSeq | Combined Total and Allele Specific Reads Sequencing Study |
| RXshrink | Maximum Likelihood Shrinkage using Generalized Ridge or Least Angle Regression |
| rxylib | Import XY-Data into R |
| Ryacas | R Interface to the 'Yacas' Computer Algebra System |
| Ryacas0 | Legacy 'Ryacas' (Interface to 'Yacas' Computer Algebra System) |
| ryandexdirect | Load Data From 'Yandex Direct' |
| RYandexTranslate | R Interface to Yandex Translate API |
| rym | R Interface to Yandex Metrica API |
| rYoutheria | Access to the YouTheria Mammal Trait Database |
| rytstat | Work with 'YouTube API' |
| rYWAASB | Simultaneous Selection by Trait and WAASB Index |
| RZabbix | R Module for Working with the 'Zabbix API' |
| rzentra | Client for the 'ZENTRA Cloud' API |
| RZigZag | Zig-Zag Sampler |
| rzmq | R Bindings for 'ZeroMQ' |
| RZooRoH | Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes |
| s2 | Spherical Geometry Operators Using the S2 Geometry Library |
| s20x | Functions for University of Auckland Course STATS 201/208 Data Analysis |
| s2dv | A Set of Common Tools for Seasonal to Decadal Verification |
| s2net | The Generalized Semi-Supervised Elastic-Net |
| s3 | Download Files from 'AWS S3' |
| s3.resourcer | S3 Resource Resolver |
| s3fs | 'Amazon Web Service S3' File System |
| s4vd | Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection |
| S7 | An Object Oriented System Meant to Become a Successor to S3 and S4 |
| saasCNV | Somatic Copy Number Alteration Analysis Using Sequencing and SNP Array Data |
| sabre | Spatial Association Between Regionalizations |
| sac | Semiparametric Analysis of Change-Point |
| saccadr | Extract Saccades via an Ensemble of Methods Approach |
| sad | Verify the Scale, Anisotropy and Direction of Weather Forecasts |
| SADEG | Stability Analysis in Differentially Expressed Genes |
| SADISA | Species Abundance Distributions with Independent-Species Assumption |
| sadists | Some Additional Distributions |
| sads | Maximum Likelihood Models for Species Abundance Distributions |
| sae | Small Area Estimation |
| sae.prop | Small Area Estimation using Fay-Herriot Models with Additive Logistic Transformation |
| sae2 | Small Area Estimation: Time-Series Models |
| saeBest | Selecting Auxiliary Variables in Small Area Estimation (SAE) Model |
| saebnocov | Small Area Estimation using Empirical Bayes without Auxiliary Variable |
| saeczi | Small Area Estimation for Continuous Zero Inflated Data |
| saeeb | Small Area Estimation for Count Data |
| saeHB | Small Area Estimation using Hierarchical Bayesian Method |
| saeHB.ME | Small Area Estimation with Measurement Error using Hierarchical Bayesian Method |
| saeHB.ME.beta | SAE with Measurement Error using HB under Beta Distribution |
| saeHB.panel | Small Area Estimation using Hierarchical Bayesian Method for Rao Yu Model |
| saeHB.panel.beta | Small Area Estimation using HB for Rao Yu Model under Beta Distribution |
| saeHB.unit | Basic Unit Level Model using Hierarchical Bayesian Approach |
| saeHB.ZIB | Small Area Estimation using Hierarchical Bayesian under Zero Inflated Binomial Distribution |
| saekernel | Small Area Estimation Non-Parametric Based Nadaraya-Watson Kernel |
| saeME | Small Area Estimation with Measurement Error |
| saemix | Stochastic Approximation Expectation Maximization (SAEM) Algorithm |
| saeMSPE | Computing MSPE Estimates in Small Area Estimation |
| saens | Small Area Estimation with Cluster Information for Estimation of Non-Sampled Areas |
| saePseudo | Small Area Estimation using Averaging Pseudo Area Level Model |
| saeRobust | Robust Small Area Estimation |
| saeSim | Simulation Tools for Small Area Estimation |
| saeTrafo | Transformations for Unit-Level Small Area Models |
| SAEval | Small Area Estimation Evaluation |
| SAFARI | Shape Analysis for AI-Reconstructed Images |
| SAFD | Statistical Analysis of Fuzzy Data |
| safejoin | Perform "Safe" Table Joins |
| safer | Encrypt and Decrypt Strings, R Objects and Files |
| safestats | Safe Anytime-Valid Inference |
| safetensors | Safetensors File Format |
| safetyCharts | Charts for Monitoring Clinical Trial Safety |
| safetyData | Clinical Trial Data |
| safetyGraphics | Interactive Graphics for Monitoring Clinical Trial Safety |
| SafeVote | Election Vote Counting with Safety Features |
| sageR | Applied Statistics for Economics and Management with R |
| SAGM | Spatial Autoregressive Graphical Model |
| SAGMM | Clustering via Stochastic Approximation and Gaussian Mixture Models |
| sahpm | Variable Selection using Simulated Annealing |
| sAIC | Akaike Information Criterion for Sparse Estimation |
| SailoR | An Extension of the Taylor Diagram to Two-Dimensional Vector Data |
| SAiVE | Functions Used for SAiVE Group Research, Collaborations, and Publications |
| salad | Simple Automatic Differentiation |
| SALES | The (Adaptive) Elastic Net and Lasso Penalized Sparse Asymmetric Least Squares (SALES) and Coupled Sparse Asymmetric Least Squares (COSALES) using Coordinate Descent and Proximal Gradient Algorithms |
| salesforcer | An Implementation of 'Salesforce' APIs Using Tidy Principles |
| salso | Search Algorithms and Loss Functions for Bayesian Clustering |
| SALTSampler | Efficient Sampling on the Simplex |
| salty | Turn Clean Data into Messy Data |
| SAM | Sparse Additive Modelling |
| samadb | South Africa Macroeconomic Database API |
| SAMBA | Selection and Misclassification Bias Adjustment for Logistic Regression Models |
| sambia | A Collection of Techniques Correcting for Sample Selection Bias |
| samc | Spatial Absorbing Markov Chains |
| SAME | Seamless Adaptive Multi-Arm Multi-Stage Enrichment |
| SAMGEP | A Semi-Supervised Method for Prediction of Phenotype Event Times |
| samon | Sensitivity Analysis for Missing Data |
| sampbias | Evaluating Geographic Sampling Bias in Biological Collections |
| sampcompR | Comparing and Visualizing Differences Between Surveys |
| sampler | Sample Design, Drawing & Data Analysis Using Data Frames |
| sampleSelection | Sample Selection Models |
| samplesize | Sample Size Calculation for Various t-Tests and Wilcoxon-Test |
| SampleSize4ClinicalTrials | Sample Size Calculation for the Comparison of Means or Proportions in Phase III Clinical Trials |
| samplesize4surveys | Sample Size Calculations for Complex Surveys |
| samplesizeCMH | Power and Sample Size Calculation for the Cochran-Mantel-Haenszel Test |
| SampleSizeDiagnostics | Choosing Sample Size for Evaluating a Diagnostic Test |
| samplesizeestimator | Calculate Sample Size for Various Scenarios |
| samplesizelogisticcasecontrol | Sample Size and Power Calculations for Case-Control Studies |
| SampleSizeMeans | Sample Size Calculations for Normal Means |
| SampleSizeProportions | Calculating Sample Size Requirements when Estimating the Difference Between Two Binomial Proportions |
| sampleVADIR | Draw Stratified Samples from the VADIR Database |
| sampling | Survey Sampling |
| SamplingBigData | Sampling Methods for Big Data |
| samplingbook | Survey Sampling Procedures |
| samplingDataCRT | Sampling Data Within Different Study Designs for Cluster Randomized Trials |
| samplingin | Dynamic Survey Sampling Solutions |
| samplingR | Sampling and Estimation Methods |
| SamplingStrata | Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys |
| samplingVarEst | Sampling Variance Estimation |
| samplr | Compare Human Performance to Sampling Algorithms |
| samplrData | Datasets from the SAMPLING Project |
| SAMprior | Self-Adapting Mixture (SAM) Priors |
| sampsizeval | Sample Size for Validation of Risk Models with Binary Outcomes |
| samr | SAM: Significance Analysis of Microarrays |
| sams | Merge-Split Samplers for Conjugate Bayesian Nonparametric Models |
| SAMtool | Stock Assessment Methods Toolkit |
| SAMTx | Sensitivity Assessment to Unmeasured Confounding with Multiple Treatments |
| SAMUR | Stochastic Augmentation of Matched Data Using Restriction Methods |
| samurais | Statistical Models for the Unsupervised Segmentation of Time-Series ('SaMUraiS') |
| sand | Statistical Analysis of Network Data with R, 2nd Edition |
| sandbox | Probabilistic Numerical Modelling of Sediment Properties |
| sandwich | Robust Covariance Matrix Estimators |
| SanFranBeachWater | Downloads and Tidies the San Francisco Public Utilities Commission Beach Water Quality Monitoring Program Data |
| SangerTools | Tools for Population Health Management Analytics |
| sanic | Solving Ax = b Nimbly in C++ |
| sanitizers | C/C++ Source Code to Trigger Address and Undefined Behaviour Sanitizers |
| sanityTracker | Keeps Track of all Performed Sanity Checks |
| sanketphonetictranslator | Phonetic Transliteration Between Hindi and English |
| sankey | Illustrate the Flow of Information or Material |
| sankeywheel | Create Dependency Wheels and Sankey Diagrams |
| sanon | Stratified Analysis with Nonparametric Covariable Adjustment |
| SANple | Fitting Shared Atoms Nested Models via Markov Chains Monte Carlo |
| sansa | Synthetic Data Generation for Imbalanced Learning in 'R' |
| santaR | Short Asynchronous Time-Series Analysis |
| santoku | A Versatile Cutting Tool |
| SANvi | Fitting Shared Atoms Nested Models via Variational Bayes |
| sanzo | Color Palettes Based on the Works of Sanzo Wada |
| saotd | Sentiment Analysis of Twitter Data |
| SAP | Statistical Analysis and Programming |
| sapevom | Group Ordinal Method for Multiple Criteria Decision-Making |
| sapfluxnetr | Working with 'Sapfluxnet' Project Data |
| sapo | Spatial Association of Different Types of Polygon |
| SAPP | Statistical Analysis of Point Processes |
| saqgetr | Import Air Quality Monitoring Data in a Fast and Easy Way |
| SAR | Smart Adaptive Recommendations |
| sara4r | An R-GUI for Spatial Analysis of Surface Runoff using the NRCS-CN Method |
| sarima | Simulation and Prediction with Seasonal ARIMA Models |
| saros | Semi-Automatic Reporting of Ordinary Surveys |
| saros.base | Base Tools for Semi-Automatic Reporting of Ordinary Surveys |
| SARP.compo | Network-Based Interpretation of Changes in Compositional Data |
| SARP.moodle | XML Output Functions for Easy Creation of Moodle Questions |
| sarp.snowprofile | Snow Profile Analysis for Snowpack and Avalanche Research |
| sarp.snowprofile.alignment | Snow Profile Alignment, Aggregation, and Clustering |
| sarp.snowprofile.pyface | 'python' Modules from Snowpack and Avalanche Research |
| sars | Fit and Compare Species-Area Relationship Models Using Multimodel Inference |
| sarsop | Approximate POMDP Planning Software |
| sas7bdat | sas7bdat Reverse Engineering Documentation |
| SAScii | Import ASCII Files Directly into R using Only a 'SAS' Input Script |
| SASdates | Convert the Dates to 'SAS' Formats |
| sasfunclust | Sparse and Smooth Functional Clustering |
| sasLM | 'SAS' Linear Model |
| SASmarkdown | 'SAS' Markdown |
| SASmixed | Data sets from "SAS System for Mixed Models" |
| sasr | 'SAS' Interface |
| sass | Syntactically Awesome Style Sheets ('Sass') |
| sassy | Makes 'R' Easier for Everyone |
| satdad | Sensitivity Analysis Tools for Dependence and Asymptotic Dependence |
| sate | Scientific Analysis of Trial Errors (SATE) |
| satellite | Handling and Manipulating Remote Sensing Data |
| satin | Visualisation and Analysis of Ocean Data Derived from Satellites |
| satres | Grouping Satellite Bands by Spectral and Spatial Resolution |
| saturnin | Spanning Trees Used for Network Inference |
| SAutomata | Inference and Learning in Stochastic Automata |
| SAVER | Single-Cell RNA-Seq Gene Expression Recovery |
| savonliquide | Accessibility Toolbox for 'R' Users |
| savvyr | Survival Analysis for AdVerse Events with VarYing Follow-Up Times |
| sawnuti | Comparing Sequences with Non-Uniform Time Intervals |
| saws | Small-Sample Adjustments for Wald Tests Using Sandwich Estimators |
| sazedR | Parameter-Free Domain-Agnostic Season Length Detection in Time Series |
| SBAGM | Search Best ARIMA, GARCH, and MS-GARCH Model |
| SBCK | Statistical Bias Correction Kit |
| sbd | Size Biased Distributions |
| sbde | Semiparametric Bayesian Density Estimation |
| SBdecomp | Estimation of the Proportion of SB Explained by Confounders |
| sbfc | Selective Bayesian Forest Classifier |
| sbgcop | Semiparametric Bayesian Gaussian Copula Estimation and Imputation |
| SBI | Simple Blinding Index for Randomized Controlled Trials |
| sBIC | Computing the Singular BIC for Multiple Models |
| SBICgraph | Structural Bayesian Information Criterion for Graphical Models |
| sbl | Sparse Bayesian Learning for QTL Mapping and Genome-Wide Association Studies |
| sbm | Stochastic Blockmodels |
| SBmedian | Scalable Bayes with Median of Subset Posteriors |
| sbmSDP | Semidefinite Programming for Fitting Block Models of Equal Block Sizes |
| SBMSplitMerge | Inference for a Generalised SBM with a Split Merge Sampler |
| SBN | Generate Stochastic Branching Networks |
| sbo | Text Prediction via Stupid Back-Off N-Gram Models |
| sboost | Machine Learning with AdaBoost on Decision Stumps |
| sbrl | Scalable Bayesian Rule Lists Model |
| SBSDiff | Satorra-Bentler Scaled Chi-Squared Difference Test |
| sbtools | USGS ScienceBase Tools |
| sbw | Stable Balancing Weights for Causal Inference and Missing Data |
| SC.MEB | Spatial Clustering with Hidden Markov Random Field using Empirical Bayes |
| SC2API | Blizzard SC2 API Wrapper |
| sc2sc | Spatial Transfer of Statistics among Spanish Census Sections |
| sca | Simple Component Analysis |
| scaffolder | Scaffolding Interfaces to Packages in Other Programming Languages |
| scagnostics | Compute scagnostics - scatterplot diagnostics |
| scaleAlign | Scale Alignment for Between-Items Multidimensional Rasch Family Models |
| scaleboot | Approximately Unbiased P-Values via Multiscale Bootstrap |
| Scalelink | Create Scale Linkage Scores |
| scales | Scale Functions for Visualization |
| ScaleSpikeSlab | Scalable Spike-and-Slab |
| scalpel | Processes Calcium Imaging Data |
| scalreg | Scaled Sparse Linear Regression |
| scam | Shape Constrained Additive Models |
| scan | Single-Case Data Analyses for Single and Multiple Baseline Designs |
| scAnnotate | An Automated Cell Type Annotation Tool for Single-Cell RNA-Sequencing Data |
| scanstatistics | Space-Time Anomaly Detection using Scan Statistics |
| scape | Statistical Catch-at-Age Plotting Environment |
| scaper | Single Cell Transcriptomics-Level Cytokine Activity Prediction and Estimation |
| scapesClassification | User-Defined Classification of Raster Surfaces |
| scapGNN | Graph Neural Network-Based Framework for Single Cell Active Pathways and Gene Modules Analysis |
| scar | Shape-Constrained Additive Regression: a Maximum Likelihood Approach |
| scaRabee | Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models |
| scatr | Create Scatter Plots with Marginal Density or Box Plots |
| scatterD3 | D3 JavaScript Scatterplot from R |
| ScatterDensity | Density Estimation and Visualization of 2D Scatter Plots |
| scattermore | Scatterplots with More Points |
| scatterpie | Scatter Pie Plot |
| scatterplot3d | 3D Scatter Plot |
| scatterPlotMatrix | 'htmlwidget' for a Scatter Plot Matrix |
| SCBiclust | Identifies Mean, Variance, and Hierarchically Clustered Biclusters |
| scBio | Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data |
| SCBmeanfd | Simultaneous Confidence Bands for the Mean of Functional Data |
| scBSP | A Fast Tool for Single-Cell Spatially Variable Genes Identifications on Large-Scale Data |
| scbursts | Single Channel Bursts Analysis |
| scCAN | Single-Cell Clustering using Autoencoder and Network Fusion |
| scCATCH | Single Cell Cluster-Based Annotation Toolkit for Cellular Heterogeneity |
| sccca | Single-Cell Correlation Based Cell Type Annotation |
| SCCI | Stochastic Complexity-Based Conditional Independence Test for Discrete Data |
| scclust | Size-Constrained Clustering |
| sccore | Core Utilities for Single-Cell RNA-Seq |
| sccr | The Self-Consistent, Competing Risks (SC-CR) Algorithms |
| SCCS | The Self-Controlled Case Series Method |
| scCustomize | Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing |
| SCDA | Spatially-Clustered Data Analysis |
| SCDB | Easily Access and Maintain Time-Based Versioned Data (Slowly-Changing-Dimension) |
| scDECO | Estimating Dynamic Correlation |
| SCdeconR | Deconvolution of Bulk RNA-Seq Data using Single-Cell RNA-Seq Data as Reference |
| scdensity | Shape-Constrained Kernel Density Estimation |
| scDHA | Single-Cell Decomposition using Hierarchical Autoencoder |
| scdhlm | Estimating Hierarchical Linear Models for Single-Case Designs |
| scDiffCom | Differential Analysis of Intercellular Communication from scRNA-Seq Data |
| scDIFtest | Item-Wise Score-Based DIF Detection |
| scdtb | Single Case Design Tools |
| scellpam | Applying Partitioning Around Medoids to Single Cell Data with High Number of Cells |
| SCEM | Splitting-Coalescence-Estimation Method |
| scenes | Switch Between Alternative 'shiny' UIs |
| SCEnt | Single Cell Entropy Analysis of Gene Heterogeneity in Cell Populations |
| SCEPtER | Stellar CharactEristics Pisa Estimation gRid |
| SCEPtERbinary | Stellar CharactEristics Pisa Estimation gRid for Binary Systems |
| SCFMonitor | Clear Monitor and Graphing Software Processing Gaussian .log File |
| scGate | Marker-Based Cell Type Purification for Single-Cell Sequencing Data |
| SCGLR | Supervised Component Generalized Linear Regression |
| scGOclust | Measuring Cell Type Similarity with Gene Ontology in Single-Cell RNA-Seq |
| scgwr | Scalable Geographically Weighted Regression |
| sched | Request Scheduler |
| schemr | Convert Images to Usable Color Schemes |
| schoenberg | Tools for 12-Tone Musical Composition |
| scholar | Analyse Citation Data from Google Scholar |
| SchoolDataIT | Retrieve, Harmonise and Map Open Data Regarding the Italian School System |
| schoolmath | Functions and Datasets for Math Used in School |
| schoRsch | Tools for Analyzing Factorial Experiments |
| schrute | The Entire Transcript from the Office in Tidy Format |
| schtools | Schloss Lab Tools for Reproducible Microbiome Research |
| schumaker | Schumaker Shape-Preserving Spline |
| SCI | Standardized Climate Indices Such as SPI, SRI or SPEI |
| SCIBER | Single-Cell Integrator and Batch Effect Remover |
| scico | Colour Palettes Based on the Scientific Colour-Maps |
| scicomptools | Tools Developed by the NCEAS Scientific Computing Support Team |
| scidesignR | Data Sets from Design and Analysis of Experiments and Observational Studies using R |
| scientific | Highly Customizable 'rmarkdown' Theme for Scientific Reporting |
| scientoText | Text & Scientometric Analytics |
| scifigure | Visualize 'Reproducibility' and 'Replicability' in a Comparison of Scientific Studies |
| scimo | Extra Recipes Steps for Dealing with Omics Data |
| SCINA | A Semi-Supervised Category Identification and Assignment Tool |
| scINSIGHT | Interpretation of Heterogeneous Single-Cell Gene Expression Data |
| SCIntRuler | Guiding the Integration of Multiple Single-Cell RNA-Seq Datasets |
| sciplot | Scientific Graphing Functions for Factorial Designs |
| scipub | Summarize Data for Scientific Publication |
| sciRmdTheme | Upgraded 'Rmarkdown' Themes for Scientific Writing |
| scISR | Single-Cell Imputation using Subspace Regression |
| scistreer | Maximum-Likelihood Perfect Phylogeny Inference at Scale |
| scitb | Provides Some Useful Functions for Making Statistical Tables |
| scITD | Single-Cell Interpretable Tensor Decomposition |
| SciViews | SciViews - Main package |
| scLink | Inferring Functional Gene Co-Expression Networks from Single Cell Data |
| sclr | Scaled Logistic Regression |
| sClust | R Toolbox for Unsupervised Spectral Clustering |
| SCMA | Single-Case Meta-Analysis |
| scMappR | Single Cell Mapper |
| scModels | Fitting Discrete Distribution Models to Count Data |
| scOntoMatch | Aligning Ontology Annotation Across Single Cell Datasets with 'scOntoMatch' |
| scoper | Spectral Clustering-Based Method for Identifying B Cell Clones |
| SCOPRO | Score Projection Between in 'Vivo' and in 'Vitro' Datasets |
| SCOR | Spherically Constrained Optimization Routine |
| score | A Package to Score Behavioral Questionnaires |
| scorecard | Credit Risk Scorecard |
| scorecardModelUtils | Credit Scorecard Modelling Utils |
| scoredec | S-Core Graph Decomposition |
| ScoreEB | Score Test Integrated with Empirical Bayes for Association Study |
| scorematchingad | Score Matching Estimation by Automatic Differentiation |
| scorepeak | Peak Functions for Peak Detection in Univariate Time Series |
| ScorePlus | Implementation of SCORE, SCORE+ and Mixed-SCORE |
| scoring | Proper Scoring Rules |
| scoringfunctions | A Collection of Scoring Functions for Assessing Point Forecasts |
| scoringRules | Scoring Rules for Parametric and Simulated Distribution Forecasts |
| scoringutils | Utilities for Scoring and Assessing Predictions |
| SCORNET | Semi-Supervised Calibration of Risk with Noisy Event Times |
| SCORPION | Single Cell Oriented Reconstruction of PANDA Individual Optimized Networks |
| SCORPIUS | Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data |
| ScottKnott | The ScottKnott Clustering Algorithm |
| ScottKnottESD | The Scott-Knott Effect Size Difference (ESD) Test |
| scout | Implements the Scout Method for Covariance-Regularized Regression |
| SCOUTer | Simulate Controlled Outliers |
| SCperf | Functions for Planning and Managing Inventories in a Supply Chain |
| scperturbR | E-Statistics for Seurat Objects |
| scpi | Prediction Intervals for Synthetic Control Methods with Multiple Treated Units and Staggered Adoption |
| scPloidy | Infer Ploidy of Single Cells |
| scplot | Plot Function for Single-Case Data Frames |
| scpoisson | Single Cell Poisson Probability Paradigm |
| SCpubr | Generate Publication Ready Visualizations of Single Cell Transcriptomics Data |
| scqe | Stability Controlled Quasi-Experimentation |
| scquantum | Estimate Ploidy and Absolute Copy Number from Single Cell Sequencing |
| scraEP | Scrape the Web with Extra Power |
| scrapeR | These Functions Fetch and Extract Text Content from Specified Web Pages |
| scrappy | A Simple Web Scraper |
| ScreenClean | Screen and clean variable selection procedures |
| ScreeNOT | 'ScreeNOT': MSE-Optimal Singular Value Thresholding in Correlated Noise |
| screenshot | Take Screenshots (Screen Capture) from R Command |
| scribe | Command Argument Parsing |
| scrime | Analysis of High-Dimensional Categorical Data Such as SNP Data |
| SCRIP | An Accurate Simulator for Single-Cell RNA Sequencing Data |
| script | Identify Script Name |
| scriptexec | Execute Native Scripts |
| scriptloc | Get the Location of the R Script that is Being Sourced/Executed |
| ScriptMapR | R Script Visualization in Cytoscape |
| scriptName | Determine a Script's Filename from Within the Script Itself |
| scriptuRs | Complete Text of the LDS Scriptures |
| scrm | Simulating the Evolution of Biological Sequences |
| ScRNAIMM | Performing Single-Cell RNA-Seq Imputation by Using Mean/Median Imputation |
| scRNAstat | A Pipeline to Process Single Cell RNAseq Data |
| scRNAtools | Single Cell RNA Sequencing Data Analysis Tools |
| scrobbler | Download 'Scrobbles' from 'Last.fm' |
| scrollrevealR | Animate 'shiny' Elements when They Scroll into View using the 'scrollrevealjs' Library |
| scROSHI | Robust Supervised Hierarchical Identification of Single Cells |
| SCRT | Single-Case Randomization Tests |
| scrutiny | Error Detection in Science |
| scrypt | Key Derivation Functions for R Based on Scrypt |
| scryr | An Interface to the 'Scryfall' API |
| scs | Splitting Conic Solver |
| scSorter | Implementation of 'scSorter' Algorithm |
| scSpatialSIM | A Point Pattern Simulator for Spatial Cellular Data |
| scTenifoldKnk | In-Silico Knockout Experiments from Single-Cell Gene Regulatory Networks |
| scTenifoldNet | Construct and Compare scGRN from Single-Cell Transcriptomic Data |
| SCtools | Extensions for Synthetic Controls Analysis |
| sctransform | Variance Stabilizing Transformations for Single Cell UMI Data |
| scuba | Diving Calculations and Decompression Models |
| scUtils | Utility Functions for Single-Cell RNA Sequencing Data |
| scutr | Balancing Multiclass Datasets for Classification Tasks |
| SCVA | Single-Case Visual Analysis |
| sda | Shrinkage Discriminant Analysis and CAT Score Variable Selection |
| SDaA | Sampling: Design and Analysis |
| sdafilter | Symmetrized Data Aggregation |
| sdam | Social Dynamics and Complexity in the Ancient Mediterranean |
| sdamr | Statistics: Data Analysis and Modelling |
| SDAR | Stratigraphic Data Analysis |
| SDAResources | Datasets and Functions for 'Sampling: Design and Analysis, 3rd Edition' |
| sdcHierarchies | Create and (Interactively) Modify Nested Hierarchies |
| sdcLog | Tools for Statistical Disclosure Control in Research Data Centers |
| sdcMicro | Statistical Disclosure Control Methods for Anonymization of Data and Risk Estimation |
| SDCNway | Tools to Evaluate Disclosure Risk |
| sdcSpatial | Statistical Disclosure Control for Spatial Data |
| sdcTable | Methods for Statistical Disclosure Control in Tabular Data |
| sde | Simulation and Inference for Stochastic Differential Equations |
| SDEFSR | Subgroup Discovery with Evolutionary Fuzzy Systems |
| sdetorus | Statistical Tools for Toroidal Diffusions |
| SDGdetector | Detect SDGs and Targets in Text |
| SDLfilter | Filtering and Assessing the Sample Size of Tracking Data |
| sdm | Species Distribution Modelling |
| sdmpredictors | Species Distribution Modelling Predictor Datasets |
| sdmTMB | Spatial and Spatiotemporal SPDE-Based GLMMs with 'TMB' |
| SDMtune | Species Distribution Model Selection |
| sdmvspecies | Create Virtual Species for Species Distribution Modelling |
| SDPDmod | Spatial Dynamic Panel Data Modeling |
| sdpdth | M-Estimator for Threshold Spatial Dynamic Panel Data Model |
| sdPrior | Scale-Dependent Hyperpriors in Structured Additive Distributional Regression |
| sdprisk | Measures of Risk for the Compound Poisson Risk Process with Diffusion |
| SDPrism2D | Visualizing the Standard Deviation as the Size of a Prism |
| sdpt3r | Semi-Definite Quadratic Linear Programming Solver |
| sdrt | Estimating the Sufficient Dimension Reduction Subspaces in Time Series |
| sdsfun | Spatial Data Science Complementary Features |
| SDT | Self-Determination Theory Measures |
| sdtm.oak | SDTM Data Transformation Engine |
| sdtmchecks | Data Quality Checks for Study Data Tabulation Model (SDTM) Datasets |
| sdtmval | Validate SDTM Domains |
| sdwd | Sparse Distance Weighted Discrimination |
| SE.EQ | SE-Test for Equivalence |
| SEA | Segregation Analysis |
| seacarb | Seawater Carbonate Chemistry |
| SEAGLE | Scalable Exact Algorithm for Large-Scale Set-Based Gene-Environment Interaction Tests |
| SEAHORS | Spatial Exploration of ArcHaeological Objects in R Shiny |
| sealasso | Standard Error Adjusted Adaptive Lasso |
| seAMLess | A Single Cell Transcriptomics Based Deconvolution Pipeline for Leukemia |
| searcher | Query Search Interfaces |
| SearchTrees | Spatial Search Trees |
| SEARS | Seamless Dose Escalation/Expansion with Adaptive Randomization Scheme |
| seas | Seasonal Analysis and Graphics, Especially for Climatology |
| season | Seasonal Analysis of Health Data |
| seasonal | R Interface to X-13-ARIMA-SEATS |
| seasonalityPlot | Seasonality Variation Plots of Stock Prices and Cryptocurrencies |
| seasonalview | Graphical User Interface for Seasonal Adjustment |
| seastests | Seasonality Tests |
| SeaVal | Validation of Seasonal Weather Forecasts |
| seawaveQ | SEAWAVE-Q Model |
| SeBR | Semiparametric Bayesian Regression Analysis |
| SECFISH | Disaggregate Variable Costs |
| SECP | Statistical Estimation of Cluster Parameters |
| secr | Spatially Explicit Capture-Recapture |
| secrdesign | Sampling Design for Spatially Explicit Capture-Recapture |
| secret | Share Sensitive Information in R Packages |
| secretbase | Cryptographic Hash, Extendable-Output and Base64 Functions |
| secrettext | Encrypt Text Using a Shifting Substitution Cipher |
| secrlinear | Spatially Explicit Capture-Recapture for Linear Habitats |
| secsse | Several Examined and Concealed States-Dependent Speciation and Extinction |
| sectorgap | Consistent Economic Trend Cycle Decomposition |
| secure | Sequential Co-Sparse Factor Regression |
| secuTrialR | Handling of Data from the Clinical Data Management System 'secuTrial' |
| sedproxy | Simulation of Sediment Archived Climate Proxy Records |
| see | Model Visualisation Toolbox for 'easystats' and 'ggplot2' |
| seeclickfixr | Access Data from the SeeClickFix Web API |
| seecolor | View Colors Used in R Objects in the Console |
| SeedCalc | Seed Germination and Seedling Growth Indexes |
| seedCCA | Seeded Canonical Correlation Analysis |
| seededlda | Seeded Sequential LDA for Topic Modeling |
| SeedImbibition | Seed Imbibition Percentage |
| SeedMatchR | Find Matches to Canonical SiRNA Seeds in Genomic Features |
| seedr | Hydro and Thermal Time Seed Germination Models in R |
| seedreg | Regression Analysis for Seed Germination as a Function of Temperature |
| seeds | Estimate Hidden Inputs using the Dynamic Elastic Net |
| SeedVigorIndex | Seed Vigor Index |
| seeker | Simplified Fetching and Processing of Microarray and RNA-Seq Data |
| seer | Feature-Based Forecast Model Selection |
| SEERaBomb | SEER and Atomic Bomb Survivor Data Analysis Tools |
| seewave | Sound Analysis and Synthesis |
| segclust2d | Bivariate Segmentation/Clustering Methods and Tools |
| SegCorr | Detecting Correlated Genomic Regions |
| segen | Sequence Generalization Through Similarity Network |
| SegEnvIneq | Environmental Inequality Indices Based on Segregation Measures |
| segmag | Determine Event Boundaries in Event Segmentation Experiments |
| segmented | Regression Models with Break-Points / Change-Points Estimation (with Possibly Random Effects) |
| segmenTier | Similarity-Based Segmentation of Multidimensional Signals |
| segmentr | Segment Data With Maximum Likelihood |
| segmetric | Metrics for Assessing Segmentation Accuracy for Geospatial Data |
| segMGarch | Multiple Change-Point Detection for High-Dimensional GARCH Processes |
| segRDA | Modeling Non-Continuous Linear Responses of Ecological Data |
| segregation | Entropy-Based Segregation Indices |
| segregatr | Segregation Analysis for Variant Interpretation |
| segtest | Tests for Segregation Distortion in Polyploids |
| seguid | Sequence Globally Unique Identifier (SEGUID) Checksums |
| sehrnett | A Very Nice Interface to 'WordNet' |
| SEI | Calculating Standardised Indices |
| SEIRfansy | Extended Susceptible-Exposed-Infected-Recovery Model |
| seismic | Predict Information Cascade by Self-Exciting Point Process |
| seismicRoll | Fast Rolling Functions for Seismology using 'Rcpp' |
| sejmRP | An Information About Deputies and Votings in Polish Diet from Seventh to Eighth Term of Office |
| Sejong | KoNLP static dictionaries and Sejong project resources |
| SEL | Semiparametric Elicitation |
| selcorr | Post-Selection Inference for Generalized Linear Models |
| Select | Determines Species Probabilities Based on Functional Traits |
| selectapref | Analysis of Field and Laboratory Foraging |
| SelectBoost | A General Algorithm to Enhance the Performance of Variable Selection Methods in Correlated Datasets |
| selection.index | Analysis of Selection Index in Plant Breeding |
| SelectionBias | Calculates Bounds for the Selection Bias for Binary Treatment and Outcome Variables |
| selectiongain | A Tool for Calculation and Optimization of the Expected Gain from Multi-Stage Selection |
| selectiveInference | Tools for Post-Selection Inference |
| selectMeta | Estimation of Weight Functions in Meta Analysis |
| selectr | Translate CSS Selectors to XPath Expressions |
| selectspm | Select Point Pattern Models Based on Minimum Contrast, AIC and Goodness of Fit |
| SeleMix | Selective Editing via Mixture Models |
| selenider | Concise, Lazy and Reliable Wrapper for 'chromote' and 'selenium' |
| selenium | Low-Level Browser Automation Interface |
| seleniumPipes | R Client Implementing the W3C WebDriver Specification |
| SELF | A Structural Equation Embedded Likelihood Framework for Causal Discovery |
| selfingTree | Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing |
| sem | Structural Equation Models |
| semantic.assets | Assets for 'shiny.semantic' |
| semantic.dashboard | Dashboard with Fomantic UI Support for Shiny |
| semaphore | Shared Memory Atomic Operations |
| Semblance | A Data-Driven Similarity Kernel on Probability Spaces |
| SEMdeep | Structural Equation Modeling with Deep Neural Network and Machine Learning |
| semdrw | 'SEM Shiny' |
| semds | Structural Equation Multidimensional Scaling |
| semEff | Automatic Calculation of Effects for Piecewise Structural Equation Models |
| semfindr | Influential Cases in Structural Equation Modeling |
| semgram | Extracting Semantic Motifs from Textual Data |
| SEMgraph | Network Analysis and Causal Inference Through Structural Equation Modeling |
| semhelpinghands | Helper Functions for Structural Equation Modeling |
| semiArtificial | Generator of Semi-Artificial Data |
| semicmprskcoxmsm | Use Inverse Probability Weighting to Estimate Treatment Effect for Semi Competing Risks Data |
| SemiCompRisks | Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data |
| semicontMANOVA | Multivariate ANalysis of VAriance with Ridge Regularization for Semicontinuous High-Dimensional Data |
| SEMID | Identifiability of Linear Structural Equation Models |
| semidist | Measure Dependence Between Categorical and Continuous Variables |
| SemiEstimate | Solve Semi-Parametric Estimation by Implicit Profiling |
| SemiMarkov | Multi-States Semi-Markov Models |
| seminr | Building and Estimating Structural Equation Models |
| SemiPar | Semiparametic Regression |
| SemiPar.depCens | Copula Based Cox Proportional Hazards Models for Dependent Censoring |
| semlbci | Likelihood-Based Confidence Interval in Structural Equation Models |
| semlrtp | Likelihood Ratio Test P-Values for Structural Equation Models |
| semmcci | Monte Carlo Confidence Intervals in Structural Equation Modeling |
| semmcmc | Bayesian Structural Equation Modeling in Multiple Omics Data Integration |
| semnar | Constructing and Interacting with Databases of Presentations |
| SemNeT | Methods and Measures for Semantic Network Analysis |
| SemNetCleaner | An Automated Cleaning Tool for Semantic and Linguistic Data |
| SemNetDictionaries | Dictionaries for the 'SemNetCleaner' Package |
| semnova | Latent Repeated Measures ANOVA |
| semPlot | Path Diagrams and Visual Analysis of Various SEM Packages' Output |
| semPower | Power Analyses for SEM |
| semptools | Customizing Structural Equation Modelling Plots |
| SEMsens | A Tool for Sensitivity Analysis in Structural Equation Modeling |
| semsfa | Semiparametric Estimation of Stochastic Frontier Models |
| semTools | Useful Tools for Structural Equation Modeling |
| semtree | Recursive Partitioning for Structural Equation Models |
| semver | 'Semantic Versioning V2.0.0' Parser |
| semverutils | Semantic Version Utilities |
| sendgridr | Mail Sender Using 'Sendgrid' Service |
| sendigR | Enable Cross-Study Analysis of 'CDISC' 'SEND' Datasets |
| sendmailR | Send Email Using R |
| sense | Automatic Stacked Ensemble for Regression Tasks |
| sensemakr | Sensitivity Analysis Tools for Regression Models |
| SensIAT | Sensitivity Analysis for Irregular Assessment Times |
| sensibo.sky | Access to 'Sensibo Sky' API V2 for Air Conditioners Remote Control |
| sensiPhy | Sensitivity Analysis for Comparative Methods |
| sensitivity | Global Sensitivity Analysis of Model Outputs and Importance Measures |
| sensitivity2x2xk | Sensitivity Analysis for 2x2xk Tables in Observational Studies |
| sensitivityCalibration | A Calibrated Sensitivity Analysis for Matched Observational Studies |
| SensitivityCaseControl | Sensitivity Analysis for Case-Control Studies |
| sensitivityfull | Sensitivity Analysis for Full Matching in Observational Studies |
| sensitivitymult | Sensitivity Analysis for Observational Studies with Multiple Outcomes |
| sensitivitymv | Sensitivity Analysis in Observational Studies |
| sensitivitymw | Sensitivity Analysis for Observational Studies Using Weighted M-Statistics |
| SensMap | Sensory and Consumer Data Mapping |
| sensmediation | Parametric Estimation and Sensitivity Analysis of Direct and Indirect Effects |
| sensobol | Computation of Variance-Based Sensitivity Indices |
| SensoMineR | Sensory Data Analysis |
| sensory | Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization Algorithm |
| SenSpe | Estimating Specificity at Controlled Sensitivity, or Vice Versa |
| sensR | Thurstonian Models for Sensory Discrimination |
| SenSrivastava | Datasets from Sen & Srivastava |
| senstrat | Sensitivity Analysis for Stratified Observational Studies |
| SensusR | Sensus Analytics |
| sentencepiece | Text Tokenization using Byte Pair Encoding and Unigram Modelling |
| sentiment.ai | Simple Sentiment Analysis Using Deep Learning |
| SentimentAnalysis | Dictionary-Based Sentiment Analysis |
| sentimentr | Calculate Text Polarity Sentiment |
| SenTinMixt | Parsimonious Mixtures of MSEN and MTIN Distributions |
| sentometrics | An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction |
| sentopics | Tools for Joint Sentiment and Topic Analysis of Textual Data |
| sentryR | Send Errors and Messages to Sentry |
| SEofM | Standard Error of Measurement |
| SEPaLS | Shrinkage for Extreme Partial Least-Squares (SEPaLS) |
| sEparaTe | Maximum Likelihood Estimation and Likelihood Ratio Test Functions for Separable Variance-Covariance Structures |
| separationplot | Separation Plots |
| sephora | Statistical Estimation of Phenological Parameters |
| sepkoski | Sepkoski's Fossil Marine Animal Genera Compendium |
| seq2R | Simple Method to Detect Compositional Changes in Genomic Sequences |
| SeqAlignR | Sequence Alignment and Visualization Tool |
| SeqAlloc | Sequential Allocation for Prospective Experiments |
| seqDesign | Simulation and Group Sequential Monitoring of Randomized Two-Stage Treatment Efficacy Trials with Time-to-Event Endpoints |
| SeqDetect | Sequence and Latent Process Detector |
| SeqExpMatch | Sequential Experimental Design via Matching on-the-Fly |
| SeqFeatR | A Tool to Associate FASTA Sequences and Features |
| seqgendiff | RNA-Seq Generation/Modification for Simulation |
| seqhandbook | Miscellaneous Tools for Sequence Analysis |
| seqHMM | Mixture Hidden Markov Models for Social Sequence Data and Other Multivariate, Multichannel Categorical Time Series |
| seqICP | Sequential Invariant Causal Prediction |
| seqimpute | Imputation of Missing Data in Sequence Analysis |
| seqinr | Biological Sequences Retrieval and Analysis |
| SeqKat | Detection of Kataegis |
| SeqMADE | Network Module-Based Model in the Differential Expression Analysis for RNA-Seq |
| seqmagick | Sequence Manipulation Utilities |
| seqminer | Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R |
| seqmon | Group Sequential Design Class for Clinical Trials |
| SeqNet | Generate RNA-Seq Data from Gene-Gene Association Networks |
| seqSHP | Building Sequences from SHP Waves |
| seqtest | Sequential Triangular Test |
| seqtrie | Radix Tree and Trie-Based String Distances |
| SequenceSpikeSlab | Exact Bayesian Model Selection Methods for the Sparse Normal Sequence Model |
| Sequential | Exact Sequential Analysis for Poisson and Binomial Data |
| SequentialDesign | Observational Database Study Planning using Exact Sequential Analysis for Poisson and Binomial Data |
| sequoia | Pedigree Inference from SNPs |
| sergeant | Tools to Transform and Query Data with Apache Drill |
| serial | The Serial Interface Package |
| seriation | Infrastructure for Ordering Objects Using Seriation |
| serieslcb | Lower Confidence Bounds for Binomial Series System |
| serocalculator | Estimating Infection Rates from Serological Data |
| serosv | Model Infectious Disease Parameters from Serosurveys |
| serp | Smooth Effects on Response Penalty for CLM |
| serpstatr | 'Serpstat' API Wrapper |
| serrsBayes | Bayesian Modelling of Raman Spectroscopy |
| servosphereR | Analyze Data Generated from Syntech Servosphere Trials |
| servr | A Simple HTTP Server to Serve Static Files or Dynamic Documents |
| sesem | Spatially Explicit Structural Equation Modeling |
| SEset | Computing Statistically-Equivalent Path Models |
| SESraster | Raster Randomization for Null Hypothesis Testing |
| sessioninfo | R Session Information |
| set | Set Operation |
| setartree | SETAR-Tree - A Novel and Accurate Tree Algorithm for Global Time Series Forecasting |
| SetMethods | Functions for Set-Theoretic Multi-Method Research and Advanced QCA |
| setRNG | Set (Normal) Random Number Generator and Seed |
| sets | Sets, Generalized Sets, Customizable Sets and Intervals |
| SetTest | Group Testing Procedures for Signal Detection and Goodness-of-Fit |
| settings | Software Option Settings Manager for R |
| settingsSync | 'Rstudio' Addin to Sync Settings and Keymaps |
| Seurat | Tools for Single Cell Genomics |
| SeuratObject | Data Structures for Single Cell Data |
| sevenbridges2 | The 'Seven Bridges Platform' API Client |
| sever | Customise 'Shiny' Disconnected Screens and Error Messages |
| sewage | A Light-Weight Data Pipelining Tool |
| sf | Simple Features for R |
| sfadv | Advanced Methods for Stochastic Frontier Analysis |
| sfaR | Stochastic Frontier Analysis Routines |
| sfarrow | Read/Write Simple Feature Objects ('sf') with 'Apache' 'Arrow' |
| sfc | Substance Flow Computation |
| sfcentral | Spatial Centrality and Dispersion Statistics |
| sfcr | Simulate Stock-Flow Consistent Models |
| sfcurve | 2x2, 3x3 and Nxn Space-Filling Curves |
| sfd | Space-Filling Design Library |
| sfdct | Constrained Triangulation for Simple Features |
| sfdep | Spatial Dependence for Simple Features |
| sFFLHD | Sequential Full Factorial-Based Latin Hypercube Design |
| sfheaders | Converts Between R Objects and Simple Feature Objects |
| sfhotspot | Hot-Spot Analysis with Simple Features |
| sfinx | Straightforward Filtering Index for AP-MS Data Analysis (SFINX) |
| sfislands | Streamlines the Process of Fitting Areal Spatial Models |
| SFM | A Package for Analyzing Skew Factor Models |
| sfnetworks | Tidy Geospatial Networks |
| sfo | San Francisco International Airport Monthly Air Passengers |
| SFPL | Sparse Fused Plackett-Luce |
| SFS | Similarity-First Search Seriation Algorithm |
| SFSI | Sparse Family and Selection Index |
| sfsmisc | Utilities from 'Seminar fuer Statistik' ETH Zurich |
| sft | Functions for Systems Factorial Technology Analysis of Data |
| sftime | Classes and Methods for Simple Feature Objects that Have a Time Column |
| SFtools | Space Filling Based Tools for Data Mining |
| sftrack | Modern Classes for Tracking and Movement Data |
| sg | 'SendGrid' Email API Client |
| sgat | Extract Information from Google's "Popular Times" |
| SGB | Simplicial Generalized Beta Regression |
| sGBJ | Survival Extension of the Generalized Berk-Jones Test |
| sgboost | Sparse-Group Boosting |
| sgd | Stochastic Gradient Descent for Scalable Estimation |
| SGDinference | Inference with Stochastic Gradient Descent |
| sgee | Stagewise Generalized Estimating Equations |
| sgeostat | An Object-Oriented Framework for Geostatistical Modeling in S+ |
| SGL | Fit a GLM (or Cox Model) with a Combination of Lasso and Group Lasso Regularization |
| sglasso | Lasso Method for RCON(V,E) Models |
| sglg | Fitting Semi-Parametric Generalized log-Gamma Regression Models |
| sglr | Sequential Generalized Likelihood Ratio Decision Boundaries Proposed by Shih, Lai, Heyse and Chen (2010, <doi:10.1002/Sim.4036>) |
| sgmodel | Solves a Generic Stochastic Growth Model with a Representative Agent |
| sGMRFmix | Sparse Gaussian Markov Random Field Mixtures for Anomaly Detection |
| sgo | Simple Geographical Operations (with OSGB36) |
| sgof | Multiple Hypothesis Testing |
| sgolay | Efficient Savitzky-Golay Filtering |
| SGP | Student Growth Percentiles & Percentile Growth Trajectories |
| SGPdata | Exemplar Data Sets for Student Growth Percentiles (SGP) Analyses |
| sgPLS | Sparse Group Partial Least Square Methods |
| SGPR | Sparse Group Penalized Regression for Bi-Level Variable Selection |
| sgpv | Calculate Second-Generation p-Values and Associated Measures |
| sgr | Sample Generation by Replacement |
| sgraph | Network Visualization Using 'sigma.js' |
| sgs | Sparse-Group SLOPE: Adaptive Bi-Level Selection with FDR Control |
| sgsR | Structurally Guided Sampling |
| sgstar | Seasonal Generalized Space Time Autoregressive (S-GSTAR) Model |
| sgt | Skewed Generalized T Distribution Tree |
| shades | Simple Colour Manipulation |
| shadowr | Selenium Plugin to Manage Multi Level Shadow Elements on Web Page |
| shadowtext | Shadow Text Grob and Layer |
| shannon | Computation of Entropy Measures and Relative Loss |
| ShapDoE | Approximation of the Shapley Values Based on Experimental Designs |
| shape | Functions for Plotting Graphical Shapes, Colors |
| ShapeChange | Change-Point Estimation using Shape-Restricted Splines |
| shapefiles | Read and Write ESRI Shapefiles |
| shapeNA | M-Estimation of Shape for Data with Missing Values |
| ShapePattern | Tools for Analyzing Shapes and Patterns |
| shapeR | Collection and Analysis of Otolith Shape Data |
| shapes | Statistical Shape Analysis |
| ShapeSelectForest | Shape Selection for Landsat Time Series of Forest Dynamics |
| SHAPforxgboost | SHAP Plots for 'XGBoost' |
| shapley | Weighted Mean SHAP for Feature Selection in ML Grid and Ensemble |
| ShapleyOutlier | Multivariate Outlier Explanations using Shapley Values and Mahalanobis Distances |
| ShapleyValue | Shapley Value Regression for Relative Importance of Attributes |
| shapper | Wrapper of Python Library 'shap' |
| shapr | Prediction Explanation with Dependence-Aware Shapley Values |
| shapviz | SHAP Visualizations |
| shar | Species-Habitat Associations |
| SharkDemography | Shark Demographic Analyses Using Leslie Matrix Models |
| sharp | Stability-enHanced Approaches using Resampling Procedures |
| sharpData | Data Sharpening |
| SharpeR | Statistical Significance of the Sharpe Ratio |
| sharpeRratio | Moment-Free Estimation of Sharpe Ratios |
| sharpPen | Penalized Data Sharpening for Local Polynomial Regression |
| sharpr2 | Estimating Regulatory Scores and Identifying ATAC-STARR Data |
| sharpshootR | A Soil Survey Toolkit |
| sharx | Models and Data Sets for the Study of Species-Area Relationships |
| shattering | Estimate the Shattering Coefficient for a Particular Dataset |
| shazam | Immunoglobulin Somatic Hypermutation Analysis |
| SheetReader | Parse xlsx Files |
| SHELF | Tools to Support the Sheffield Elicitation Framework |
| ShellChron | Builds Chronologies from Oxygen Isotope Profiles in Shells |
| shelltrace | Bivalve Growth and Trace Element Accumulation Model |
| shelter | Support for Secure API Key Management |
| sherlock | Graphical Displays for Structured Problem Solving and Diagnosis |
| SherlockHolmes | Building a Concordance of Terms in a Series of Texts |
| shidashi | A Shiny Dashboard Template System |
| shide | Date/Time Classes Based on Jalali Calendar |
| ShiftConvolvePoibin | Exactly Computing the Tail of the Poisson-Binomial Distribution |
| shiftR | Fast Enrichment Analysis via Circular Permutations |
| ShiftShareSE | Inference in Regressions with Shift-Share Structure |
| shinipsum | Lorem-Ipsum-Like Helpers for Fast Shiny Prototyping |
| shiny | Web Application Framework for R |
| shiny.benchmark | Benchmark the Performance of 'shiny' Applications |
| shiny.blueprint | Palantir's 'Blueprint' for 'Shiny' Apps |
| shiny.destroy | Create Destroyable Modules in 'Shiny' |
| shiny.emptystate | Empty State Components for 'Shiny' |
| shiny.exe | Launch a Shiny Application without Opening R or RStudio |
| shiny.fluent | Microsoft Fluent UI for Shiny Apps |
| shiny.i18n | Shiny Applications Internationalization |
| shiny.info | 'shiny' Info |
| shiny.pwa | Progressive Web App Support for Shiny |
| shiny.react | Tools for Using React in Shiny |
| shiny.reglog | Optional Login and Registration Module System for ShinyApps |
| shiny.router | Basic Routing for Shiny Web Applications |
| shiny.semantic | Semantic UI Support for Shiny |
| shiny.tailwind | 'TailwindCSS' for Shiny Apps |
| shiny.telemetry | 'Shiny' App Usage Telemetry |
| shinyAce | Ace Editor Bindings for Shiny |
| shinyaframe | 'WebVR' Data Visualizations with 'RStudio Shiny' and 'Mozilla A-Frame' |
| shinyalert | Easily Create Pretty Popup Messages (Modals) in 'Shiny' |
| shinyanimate | Animation for 'shiny' Elements |
| shinyauthr | 'Shiny' Authentication Modules |
| shinybrms | Graphical User Interface ('shiny' App) for 'brms' |
| shinybrowser | Find Out Information About a User's Web Browser in 'Shiny' |
| shinyBS | Twitter Bootstrap Components for Shiny |
| shinybusy | Busy Indicators and Notifications for 'Shiny' Applications |
| shinyChakraSlider | Combined Slider and Numeric Input for 'Shiny' |
| shinyChakraUI | A Wrapper of the 'React' Library 'Chakra UI' for 'Shiny' |
| shinyChatR | R Shiny Chat Module |
| shinyCohortBuilder | Modular Cohort-Building Framework for Analytical Dashboards |
| shinyCox | Create 'shiny' Applications for Cox Proportional Hazards Models |
| shinycroneditor | 'shiny' Cron Expression Input Widget |
| shinycssloaders | Add Loading Animations to a 'shiny' Output While It's Recalculating |
| shinycustomloader | Custom Loader for Shiny Outputs |
| shinyCyJS | Create Interactive Network Visualizations in R and 'shiny' |
| shinydashboard | Create Dashboards with 'Shiny' |
| shinydashboardPlus | Add More 'AdminLTE2' Components to 'shinydashboard' |
| shinyDatetimePickers | Some Datetime Pickers for 'Shiny' |
| shinydbauth | Simple Authentification for 'shiny' Applications |
| shinydisconnect | Show a Nice Message When a 'Shiny' App Disconnects or Errors |
| shinydlplot | Add a Download Button to a 'shiny' Plot or 'plotly' |
| shinyDND | Shiny Drag-n-Drop |
| shinydrive | File Sharing Shiny Module |
| shinyEffects | Customize Your Web Apps with Fancy Effects |
| shinyExprPortal | A Configurable 'shiny' Portal for Sharing Analysis of Molecular Expression Data |
| shinyFeedback | Display User Feedback in Shiny Apps |
| shinyFiles | A Server-Side File System Viewer for Shiny |
| shinyfilter | Use Interdependent Filters on Table Columns in Shiny Apps |
| shinyfullscreen | Display 'HTML' Elements on Full Screen in 'Shiny' Apps |
| shinyGizmo | Custom Components for Shiny Applications |
| shinyglide | Glide Component for Shiny Applications |
| shinyGovstyle | Custom Gov Style Inputs for Shiny |
| shinyHeatmaply | Deploy 'heatmaply' using 'shiny' |
| shinyhelper | Easily Add Markdown Help Files to 'shiny' App Elements |
| shinyhttr | Progress Bars for Downloads in 'shiny' Apps |
| shinyHugePlot | Efficient Plotting of Large-Sized Data |
| shinyInvoice | Shiny App - Generate a Pdf Invoice with 'Rmarkdown' |
| shinyIRT | Item Response Theory Analysis with a 'shiny' Application |
| ShinyItemAnalysis | Test and Item Analysis via Shiny |
| shinyjqui | 'jQuery UI' Interactions and Effects for Shiny |
| shinyjs | Easily Improve the User Experience of Your Shiny Apps in Seconds |
| shinyKGode | An Interactive Application for ODE Parameter Inference Using Gradient Matching |
| shinyKnobs | A Collection of Knob Inputs for 'shiny' |
| shinylight | Web Interface to 'R' Functions |
| ShinyLink | 'Shiny' Based Record Linkage Tool |
| shinylive | Run 'shiny' Applications in the Browser |
| shinyloadtest | Load Test Shiny Applications |
| shinylogs | Record Everything that Happens in a 'Shiny' Application |
| shinyLottie | Seamlessly Integrate 'Lottie' Animations into 'shiny' Applications |
| shinyLP | Bootstrap Landing Home Pages for Shiny Applications |
| shinymanager | Authentication Management for 'Shiny' Applications |
| shinymaterial | Implement Material Design in Shiny Applications |
| shinyMatrix | Shiny Matrix Input Field |
| shinyMergely | Compare and Merge Two Files with a 'Shiny' App |
| shinymeta | Export Domain Logic from Shiny using Meta-Programming |
| shinymgr | A Framework for Building, Managing, and Stitching 'shiny' Modules into Reproducible Workflows |
| shinyMixR | Interactive 'shiny' Dashboard for 'nlmixr2' |
| shinyML | Compare Supervised Machine Learning Models Using Shiny App |
| shinyMobile | Mobile Ready 'shiny' Apps with Standalone Capabilities |
| shinymodels | Interactive Assessments of Models |
| shinyMolBio | Molecular Biology Visualization Tools for 'Shiny' Apps |
| shinyMonacoEditor | The 'Monaco' Editor in 'Shiny' |
| shinyNORRRM | The Ultimate Igneous Norm |
| shinyNotes | Shiny Module for Taking Free-Form Notes |
| shinyobjects | Access Reactive Data Interactively |
| shinypanel | Shiny Control Panel |
| shinypanels | Shiny Layout with Collapsible Panels |
| shinypivottabler | Shiny Module to Create Pivot Tables |
| shinyPredict | Predictions using Shiny |
| shinyQueryBuilder | Construct Complex Filtering Queries in 'Shiny' |
| ShinyQuickStarter | 'RStudio' Addin for Building Shiny Apps per Drag & Drop |
| shinyquiz | Create Interactive Quizzes in 'shiny' |
| shinyRadioMatrix | Create a Matrix with Radio Buttons |
| shinyRatings | An Intuitive Way of Providing Star Rating in a 'shiny' App |
| shinyrecipes | Gadget to Use the Data Preprocessing 'recipes' Package Interactively |
| shinyreforms | Add Forms to your 'Shiny' App |
| shinyRGL | Shiny Wrappers for RGL |
| shinySbm | 'shiny' Application to Use the Stochastic Block Model |
| shinyscreenshot | Capture Screenshots of Entire Pages or Parts of Pages in 'Shiny' |
| shinySearchbar | Shiny Searchbar - An Input Widget for Highlighting Text and More |
| shinySelect | A Wrapper of the 'react-select' Library |
| shinyservicebot | Servicebot 'Shiny' Integration |
| shinyShortcut | Creates an Executable Shortcut for Shiny Applications |
| shinySIR | Interactive Plotting for Mathematical Models of Infectious Disease Spread |
| shinystan | Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models |
| shinyStorePlus | Secure in-Browser Storage for 'Shiny' Inputs, Outputs and Variables |
| shinysurveys | Create and Deploy Surveys in 'Shiny' |
| shinyTempSignal | Explore Temporal and Other Phylogenetic Signals |
| shinytest | Test Shiny Apps |
| shinytest2 | Testing for Shiny Applications |
| ShinyTester | Functions to Minimize Bonehead Moves While Working with 'shiny' |
| shinythemes | Themes for Shiny |
| shinyTime | A Time Input Widget for Shiny |
| shinytitle | Update Browser Window Title in 'shiny' Session |
| shinyToastify | Pretty Notifications for 'Shiny' |
| shinytoastr | Notifications from 'Shiny' |
| shinyTree | jsTree Bindings for Shiny |
| shinyvalidate | Input Validation for Shiny Apps |
| shinyWGD | 'Shiny' Application for Whole Genome Duplication Analysis |
| shinyWidgets | Custom Inputs Widgets for Shiny |
| ShinyWizard | An Interactive Wizard to Design, Build, and Deploy R Packages Demo Presentation |
| shinyXYpad | XY Controller for 'Shiny' |
| shipunov | Miscellaneous Functions from Alexey Shipunov |
| shock | Slope Heuristic for Block-Diagonal Covariance Selection in High Dimensional Gaussian Graphical Models |
| shopifyadsR | Get 'Shopify' Ads Data via the 'Windsor.ai' API |
| shopifyr | An R Interface to the Shopify API |
| shoredate | Shoreline Dating Coastal Stone Age Sites |
| shortcuts | Useful Shortcuts to Interact with 'RStudio' Scripts |
| ShortForm | Automatic Short Form Creation |
| shortIRT | Procedures Based on Item Response Theory Models for the Development of Short Test Forms |
| shorts | Short Sprints |
| shotGroups | Analyze Shot Group Data |
| showimage | Show an Image on an 'R' Graphics Device |
| showtext | Using Fonts More Easily in R Graphs |
| showtextdb | Font Files for the 'showtext' Package |
| shp2graph | Convert a 'SpatialLinesDataFrame' -Class Object to an 'igraph'-Class Object |
| shrink | Global, Parameterwise and Joint Shrinkage Factor Estimation |
| ShrinkCovMat | Shrinkage Covariance Matrix Estimators |
| shrinkDSM | Efficient Bayesian Inference for Dynamic Survival Models with Shrinkage |
| shrinkem | Approximate Bayesian Regularization for Parsimonious Estimates |
| shrinkTVP | Efficient Bayesian Inference for Time-Varying Parameter Models with Shrinkage |
| shrinkTVPVAR | Efficient Bayesian Inference for TVP-VAR-SV Models with Shrinkage |
| shroomDK | Accessing the Flipside Crypto ShroomDK API |
| SHT | Statistical Hypothesis Testing Toolbox |
| shuffle | The Shuffle Estimator for Explainable Variance |
| shuffleCI | Confidence Intervals Compared via Shuffling |
| shutterplot | The R Shutter Plot Package |
| SI | Stochastic Integrating |
| SIAmodules | Modules for 'ShinyItemAnalysis' |
| SIAtools | 'ShinyItemAnalysis' Modules Development Toolkit |
| SIBER | Stable Isotope Bayesian Ellipses in R |
| SIBERG | Systematic Identification of Bimodally Expressed Genes Using RNAseq Data |
| sicegar | Analysis of Single-Cell Viral Growth Curves |
| siconvr | Fetch Data from Plataforma +Brasil (SICONV) |
| sicure | Single-Index Mixture Cure Models |
| SID | Structural Intervention Distance |
| SIDES | Subgroup Identification Based on Differential Effect Search |
| sidier | Substitution and Indel Distances to Infer Evolutionary Relationships |
| sidrar | An Interface to IBGE's SIDRA API |
| Sie2nts | Sieve Methods for Non-Stationary Time Series |
| siebanxicor | Query Data Series from Bank of Mexico |
| SiER | Signal Extraction Approach for Sparse Multivariate Response Regression |
| Sieve | Nonparametric Estimation by the Method of Sieves |
| sievePH | Sieve Analysis Methods for Proportional Hazards Models |
| sievetest | Laboratory Sieve Test Reporting Functions |
| sift | Intelligently Peruse Data |
| sig | Print Function Signatures |
| sigclust | Statistical Significance of Clustering |
| SightabilityModel | Wildlife Sightability Modeling |
| sigInt | Estimate the Parameters of a Discrete Crisis-Bargaining Game |
| sigmajs | Interface to 'Sigma.js' Graph Visualization Library |
| sigminer | Extract, Analyze and Visualize Mutational Signatures for Genomic Variations |
| sigmoid | Sigmoid Functions for Machine Learning |
| SIGN | Similarity Identification in Gene Expression |
| Signac | Analysis of Single-Cell Chromatin Data |
| SignacX | Cell Type Identification and Discovery from Single Cell Gene Expression Data |
| signal | Signal Processing |
| signalHsmm | Predict Presence of Signal Peptides |
| signatureSurvival | Signature Survival Analysis |
| signed.backbones | Extract the Signed Backbones of Weighted Networks |
| signibox | Statistical Significance Marks on Boxplots |
| SignifReg | Consistent Significance Controlled Variable Selection in Generalized Linear Regression |
| signnet | Methods to Analyse Signed Networks |
| signs | Insert Proper Minus Signs |
| SigOptR | R API Wrapper for SigOpt |
| sigora | Signature Overrepresentation Analysis |
| sigQC | Quality Control Metrics for Gene Signatures |
| sigr | Succinct and Correct Statistical Summaries for Reports |
| SigTree | Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree |
| SIHR | Statistical Inference in High Dimensional Regression |
| siie | Superior Identification Index and Its Extensions |
| siland | Spatial Influence of Landscape |
| SILFS | Subgroup Identification with Latent Factor Structure |
| SILGGM | Statistical Inference of Large-Scale Gaussian Graphical Model in Gene Networks |
| silicate | Common Forms for Complex Hierarchical and Relational Data Structures |
| SillyPutty | Silly Putty Clustering |
| SILM | Simultaneous Inference for Linear Models |
| silp | Conditional Process Analysis (CPA) via Structural Equation Modeling (SEM) Approach |
| sim.BA | Simulation-Based Bias Analysis for Observational Studies |
| Sim.DiffProc | Simulation of Diffusion Processes |
| Sim.PLFN | Simulation of Piecewise Linear Fuzzy Numbers |
| sim1000G | Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes |
| sim2Dpredictr | Simulate Outcomes Using Spatially Dependent Design Matrices |
| simaerep | Find Clinical Trial Sites Under-Reporting Adverse Events |
| SimBIID | Simulation-Based Inference Methods for Infectious Disease Models |
| simboot | Simultaneous Inference for Diversity Indices |
| simCAT | Implements Computerized Adaptive Testing Simulations |
| simcausal | Simulating Longitudinal Data with Causal Inference Applications |
| simcdm | Simulate Cognitive Diagnostic Model ('CDM') Data |
| SimComp | Simultaneous Comparisons for Multiple Endpoints |
| SimCop | Simulate from Arbitrary Copulae |
| SimCorMultRes | Simulates Correlated Multinomial Responses |
| SimCorrMix | Simulation of Correlated Data with Multiple Variable Types Including Continuous and Count Mixture Distributions |
| simcross | Simulate Experimental Crosses |
| simctest | Safe Implementation of Monte Carlo Tests |
| simDAG | Simulate Data from a DAG and Associated Node Information |
| simdata | Generate Simulated Datasets |
| simdd | Simulation of Fisher Bingham and Related Directional Distributions |
| SimDesign | Structure for Organizing Monte Carlo Simulation Designs |
| SimDissolution | Modeling and Assessing Similarity of Drug Dissolutions Profiles |
| simdistr | Assessment of Data Trial Distributions According to the Carlisle-Stouffer Method |
| simDNAmixtures | Simulate Forensic DNA Mixtures |
| simecol | Simulation of Ecological (and Other) Dynamic Systems |
| simEd | Simulation Education |
| SimEngine | A Modular Framework for Statistical Simulations in R |
| simer | Data Simulation for Life Science and Breeding |
| simest | Constrained Single Index Model Estimation |
| simET | Tools for Simulation of Evapotranspiration of Field Crops and Soil Water Balance |
| SimEUCartelLaw | Simulation of Legal Exemption System for European Cartel Law |
| simex | SIMEX- And MCSIMEX-Algorithm for Measurement Error Models |
| simexaft | simexaft |
| simExam | Generate Simulated Data for IRT-Enabled Exams |
| SIMEXBoost | Boosting Method for High-Dimensional Error-Prone Data |
| simfam | Simulate and Model Family Pedigrees with Structured Founders |
| simfinapi | Accessing 'SimFin' Data |
| simfit | Test Model Fit with Simulation |
| simFrame | Simulation Framework |
| simglm | Simulate Models Based on the Generalized Linear Model |
| simgof | Simultaneous Goodness-of-Fits Tests |
| SimHaz | Simulated Survival and Hazard Analysis for Time-Dependent Exposure |
| simhelpers | Helper Functions for Simulation Studies |
| SIMICO | Set-Based Inference for Multiple Interval-Censored Outcomes |
| simIDM | Simulating Oncology Trials using an Illness-Death Model |
| SimilarityMeasures | Trajectory Similarity Measures |
| Simile | Interact with Simile Models |
| SimInf | A Framework for Data-Driven Stochastic Disease Spread Simulations |
| simIReff | Stochastic Simulation for Information Retrieval Evaluation: Effectiveness Scores |
| simitation | Simplified Simulations |
| simITS | Analysis via Simulation of Interrupted Time Series (ITS) Data |
| SimJoint | Simulate Joint Distribution |
| simlandr | Simulation-Based Landscape Construction for Dynamical Systems |
| SIMle | Estimation and Inference for General Time Series Regression |
| simmer | Discrete-Event Simulation for R |
| simmer.bricks | Helper Methods for 'simmer' Trajectories |
| simmer.plot | Plotting Methods for 'simmer' |
| simMetric | Metrics (with Uncertainty) for Simulation Studies that Evaluate Statistical Methods |
| simml | Single-Index Models with Multiple-Links |
| simMP | Simulate Somatic Mutations in Cancer Genomes from Mutational Processes |
| simmr | A Stable Isotope Mixing Model |
| SIMMS | Subnetwork Integration for Multi-Modal Signatures |
| simMSM | Simulation of Event Histories for Multi-State Models |
| SimMultiCorrData | Simulation of Correlated Data with Multiple Variable Types |
| SimNPH | Simulate Non-Proportional Hazards |
| simode | Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching |
| simodels | Flexible Framework for Developing Spatial Interaction Models |
| simPH | Simulate and Plot Estimates from Cox Proportional Hazards Models |
| simphony | Simulating Large-Scale, Rhythmic Data |
| simplace | Interface to Use the Modelling Framework 'SIMPLACE' |
| simplanonym | Consistent Anonymisation Across Datasets |
| SIMPLE.REGRESSION | OLS, Moderated, Logistic, and Count Regressions Made Simple |
| simpleboot | Simple Bootstrap Routines |
| simpleCache | Simply Caching R Objects |
| simplecolors | Access Color Names Using a Standardized Nomenclature |
| simpleFDR | Simple False Discovery Rate Calculation |
| simplegraph | Simple Graph Data Types and Basic Algorithms |
| simplegraphdb | A Simple Graph Database |
| simpleMH | Simple Metropolis-Hastings MCMC Algorithm |
| simpleMLP | Simple Multilayer Perceptron Neural Network |
| simpleNeural | An Easy to Use Multilayer Perceptron |
| simplePHENOTYPES | Simulation of Pleiotropic, Linked and Epistatic Phenotypes |
| simpleRCache | Simple R Cache |
| simplermarkdown | Simple Engine for Generating Reports using R |
| simpleSetup | Set Up R Source Code Files for Use on Multiple Machines |
| simpletex | Mathematical Formulas and Character Recognition |
| simplexreg | Regression Analysis of Proportional Data Using Simplex Distribution |
| simplextree | Provides Tools for Working with General Simplicial Complexes |
| SimplicialCubature | Integration of Functions Over Simplices |
| simplifyNet | Network Sparsification |
| SimplyAgree | Flexible and Robust Agreement and Reliability Analyses |
| SIMplyBee | 'AlphaSimR' Extension for Simulating Honeybee Populations and Breeding Programmes |
| simPop | Simulation of Complex Synthetic Data Information |
| simpr | Flexible 'Tidyverse'-Friendly Simulations |
| simputation | Simple Imputation |
| simr | Power Analysis for Generalised Linear Mixed Models by Simulation |
| SimRDS | Simulation of Respondent Driven Samples |
| simrec | Simulation of Recurrent Event Data for Non-Constant Baseline Hazard |
| SimReg | Similarity Regression |
| simrel | Simulation of Multivariate Linear Model Data |
| simRestore | Simulate the Effect of Management Policies on Restoration Efforts |
| SiMRiv | Simulating Multistate Movements in River/Heterogeneous Landscapes |
| sims | Simulate Data from R or 'JAGS' Code |
| simsalapar | Tools for Simulation Studies in Parallel |
| simsem | SIMulated Structural Equation Modeling |
| SimSeq | Nonparametric Simulation of RNA-Seq Data |
| simsl | Single-Index Models with a Surface-Link |
| SimSST | Simulated Stop Signal Task Data |
| simstandard | Generate Standardized Data |
| simStateSpace | Simulate Data from State Space Models |
| simstudy | Simulation of Study Data |
| simsurv | Simulate Survival Data |
| SimSurvey | Test Surveys by Simulating Spatially-Correlated Populations |
| SimSurvNMarker | Simulate Survival Time and Markers |
| simTargetCov | Data Transformation or Simulation with Empirical Covariance Matrix |
| simtimer | Datetimes as Integers for Discrete-Event Simulations |
| SimTimeVar | Simulate Longitudinal Dataset with Time-Varying Correlated Covariates |
| simTool | Conduct Simulation Studies with a Minimal Amount of Source Code |
| simtrait | Simulate Complex Traits from Genotypes |
| simtrial | Clinical Trial Simulation |
| simts | Time Series Analysis Tools |
| simuclustfactor | Simultaneous Clustering and Factorial Decomposition of Three-Way Datasets |
| simukde | Simulation with Kernel Density Estimation |
| simulariatools | Simularia Tools for the Analysis of Air Pollution Data |
| simulator | An Engine for Running Simulations |
| simule | A Constrained L1 Minimization Approach for Estimating Multiple Sparse Gaussian or Nonparanormal Graphical Models |
| simulMGF | Simulate SNP Matrix, Phenotype and Genotypic Effects |
| SimVitD | Simulation Tools for Planning Vitamin D Studies |
| sinaplot | An Enhanced Chart for Simple and Truthful Representation of Single Observations over Multiple Classes |
| sinar | Conditional Least Squared (CLS) Method for the Model SINAR(1,1) |
| sindyr | Sparse Identification of Nonlinear Dynamics |
| sinew | Package Development Documentation and Namespace Management |
| singcar | Comparing Single Cases to Small Samples |
| SingleCaseES | A Calculator for Single-Case Effect Sizes |
| singleCellHaystack | A Universal Differential Expression Prediction Tool for Single-Cell and Spatial Genomics Data |
| singleRcapture | Single-Source Capture-Recapture Models |
| singR | Simultaneous Non-Gaussian Component Analysis |
| sinib | Sum of Independent Non-Identical Binomial Random Variables |
| SINRELEF.LD | Reliability and Relative Efficiency in Locally-Dependent Measures |
| SIPDIBGE | Collection of Household Survey Packages Conducted by IBGE |
| SIPETool | SIFT-MS and CPET Data Processor |
| SiPhyNetwork | A Phylogenetic Simulator for Reticulate Evolution |
| siplab | Spatial Individual-Plant Modelling |
| siqr | An R Package for Single-Index Quantile Regression |
| sirad | Functions for Calculating Daily Solar Radiation and Evapotranspiration |
| SIRE | Finding Feedback Effects in SEM and Testing for Their Significance |
| siren | Hybrid FA-CFA for Controlling Acquiescence in Restricted Factorial Solutions |
| SIRmcmc | Compartmental Susceptible-Infectious-Recovered (SIR) Model of Community and Household Infection |
| sirt | Supplementary Item Response Theory Models |
| SIRthresholded | Sliced Inverse Regression with Thresholding |
| sirus | Stable and Interpretable RUle Set |
| SIS | Sure Independence Screening |
| sisal | Sequential Input Selection Algorithm |
| SISIR | Select Intervals Suited for Functional Regression |
| sisireg | Sign-Simplicity-Regression-Solver |
| sistec | Tools to Analyze 'Sistec' Datasets |
| sisti | Real-Time PCR Data Sets by Sisti et al. (2010) |
| sistmr | A Collection of Utility Function from the Inserm/Inria SISTM Team |
| sisVIVE | Some Invalid Some Valid Instrumental Variables Estimator |
| SIT | Association Measurement Through Sliced Independence Test (SIT) |
| sitar | Super Imposition by Translation and Rotation Growth Curve Analysis |
| sitepickR | Two-Level Sample Selection with Optimal Site Replacement |
| siteymlgen | Automatically Generate _site.yml File for 'R Markdown' |
| SITH | A Spatial Model of Intra-Tumor Heterogeneity |
| sitmo | Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files |
| sitools | Format a number to a string with SI prefix |
| sitree | Single Tree Simulator |
| sitreeE | Sitree Extensions |
| sits | Satellite Image Time Series Analysis for Earth Observation Data Cubes |
| sivirep | Data Wrangling and Automated Reports from 'SIVIGILA' Source |
| sivs | Stable Iterative Variable Selection |
| SixSigma | Six Sigma Tools for Quality Control and Improvement |
| SizeEstimation | Estimating the Sizes of Populations at Risk of HIV Infection from Multiple Data Sources Using a Bayesian Hierarchical Model |
| sizeMat | Estimate Size at Sexual Maturity |
| SiZer | Significant Zero Crossings |
| sjdbc | JDBC Driver Interface |
| sjlabelled | Labelled Data Utility Functions |
| sjmisc | Data and Variable Transformation Functions |
| sjPlot | Data Visualization for Statistics in Social Science |
| sjSDM | Scalable Joint Species Distribution Modeling |
| sjstats | Collection of Convenient Functions for Common Statistical Computations |
| sjtable2df | Convert 'sjPlot' HTML-Tables to R 'data.frame' |
| SK4FGA | Scott-Knott for Forensic Glass Analysis |
| SKAT | SNP-Set (Sequence) Kernel Association Test |
| skater | Utilities for SNP-Based Kinship Analysis |
| skedastic | Handling Heteroskedasticity in the Linear Regression Model |
| skeletor | An R Package Skeleton Generator |
| skellam | Densities and Sampling for the Skellam Distribution |
| sketch | Interactive Sketches |
| sketcher | Pencil Sketch Effect |
| sketching | Sketching of Data via Random Subspace Embeddings |
| sketchy | Create Custom Research Compendiums |
| SkewHyperbolic | The Skew Hyperbolic Student t-Distribution |
| skewlmm | Scale Mixture of Skew-Normal Linear Mixed Models |
| skewMLRM | Estimation for Scale-Shape Mixtures of Skew-Normal Distributions |
| skewsamp | Estimate Sample Sizes for Group Comparisons with Skewed Distributions |
| skewt | The Skewed Student-t Distribution |
| SKFCPD | Fast Online Changepoint Detection for Temporally Correlated Data |
| Skillings.Mack | The Skillings-Mack Test Statistic for Block Designs with Missing Observations |
| skilljaR | Connect to Your 'Skilljar' Data |
| skimr | Compact and Flexible Summaries of Data |
| skipTrack | A Bayesian Hierarchical Model that Controls for Non-Adherence in Mobile Menstrual Cycle Tracking |
| sklarsomega | Measuring Agreement Using Sklar's Omega Coefficient |
| skm | Selective k-Means |
| skmeans | Spherical k-Means Clustering |
| SKNN | A Super K-Nearest Neighbor (SKNN) Classification Algorithm |
| skpr | Design of Experiments Suite: Generate and Evaluate Optimal Designs |
| skylight | A Simple Sky Illuminance Model |
| skyscapeR | Data Analysis and Visualization for Skyscape Archaeology |
| slackr | Send Messages, Images, R Objects and Files to 'Slack' Channels/Users |
| slam | Sparse Lightweight Arrays and Matrices |
| slanter | Slanted Matrices and Ordered Clustering |
| slap | Simplified Error Handling |
| SlaPMEG | Pathway Testing for Longitudinal Omics |
| slasso | S-LASSO Estimator for the Function-on-Function Linear Regression |
| SLBDD | Statistical Learning for Big Dependent Data |
| slca | Structural Modeling for Multiple Latent Class Variables |
| SLCARE | Semiparametric Latent Class Analysis of Recurrent Events |
| slcm | Sparse Latent Class Model for Cognitive Diagnosis |
| sld | Estimation and Use of the Quantile-Based Skew Logistic Distribution |
| SLDAssay | Software for Analyzing Limiting Dilution Assays |
| sleekts | 4253H, Twice Smoothing |
| SleepCycles | Sleep Cycle Detection |
| sleeperapi | Wrapper Functions Around 'Sleeper' (Fantasy Sports) API |
| sleepr | Analyse Activity and Sleep Behaviour |
| sleepwalk | Interactively Explore Dimension-Reduced Embeddings |
| sleev | Semiparametric Likelihood Estimation with Errors in Variables |
| SLEMI | Statistical Learning Based Estimation of Mutual Information |
| slendr | A Simulation Framework for Spatiotemporal Population Genetics |
| Sleuth2 | Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd Ed)" |
| Sleuth3 | Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)" |
| slfm | Fitting a Bayesian Sparse Latent Factor Model in Gene Expression Analysis |
| SLFPCA | Sparse Logistic Functional Principal Component Analysis |
| slgf | Bayesian Model Selection with Suspected Latent Grouping Factors |
| SLHD | Maximin-Distance (Sliced) Latin Hypercube Designs |
| SlicedLHD | Sliced Latin Hypercube Designs |
| slickR | Create Interactive Carousels with the 'JavaScript' 'Slick' Library |
| SLIDE | Single Cell Linkage by Distance Estimation is SLIDE |
| slider | Sliding Window Functions |
| slideview | Compare Raster Images Side by Side with a Slider |
| SlidingWindows | Methods for Time Series Analysis |
| slim | Singular Linear Models for Longitudinal Data |
| slimrec | Sparse Linear Method to Predict Ratings and Top-N Recommendations |
| slippymath | Slippy Map Tile Tools |
| slm | Stationary Linear Models |
| SLModels | Stepwise Linear Models for Binary Classification Problems under Youden Index Optimisation |
| sloop | Helpers for 'OOP' in R |
| SLOPE | Sorted L1 Penalized Estimation |
| slouch | Stochastic Linear Ornstein-Uhlenbeck Comparative Hypotheses |
| slowraker | A Slow Version of the Rapid Automatic Keyword Extraction (RAKE) Algorithm |
| slp | Discrete Prolate Spheroidal (Slepian) Sequence Regression Smoothers |
| SLPresElection | Presidential Election Data of "Sri Lanka" from 1982 to 2015 |
| slr | Semi-Latin Rectangles |
| SLSEdesign | Optimal Regression Design under the Second-Order Least Squares Estimator |
| SLTCA | Scalable and Robust Latent Trajectory Class Analysis |
| slurmR | A Lightweight Wrapper for 'Slurm' |
| sm | Smoothing Methods for Nonparametric Regression and Density Estimation |
| smaa | Stochastic Multi-Criteria Acceptability Analysis |
| smacof | Multidimensional Scaling |
| smacofx | Flexible Multidimensional Scaling and 'smacof' Extensions |
| smacpod | Statistical Methods for the Analysis of Case-Control Point Data |
| smallarea | Fits a Fay Herriot Model |
| SmallCountRounding | Small Count Rounding of Tabular Data |
| smallsets | Visual Documentation for Data Preprocessing |
| smallstuff | Dr. Small's Functions |
| smam | Statistical Modeling of Animal Movements |
| SMARTbayesR | Bayesian Set of Best Dynamic Treatment Regimes and Sample Size in SMARTs for Binary Outcomes |
| smartDesign | Sequential Multiple Assignment Randomized Trial Design |
| SmartEDA | Summarize and Explore the Data |
| SmarterPoland | Tools for Accessing Various Datasets Developed by the Foundation SmarterPoland.pl |
| smartmap | Smartly Create Maps from R Objects |
| SmartMeterAnalytics | Methods for Smart Meter Data Analysis |
| SMARTp | Sample Size for SMART Designs in Non-Surgical Periodontal Trials |
| smartsheetr | Access and Write 'Smartsheet' Data using the 'Smartsheet' API 2.0 |
| smartsizer | Power Analysis for a SMART Design |
| smartsnp | Fast Multivariate Analyses of Big Genomic Data |
| SmartSVA | Fast and Robust Surrogate Variable Analysis |
| smatr | (Standardised) Major Axis Estimation and Testing Routines |
| smbinning | Scoring Modeling and Optimal Binning |
| SmCCNet | Sparse Multiple Canonical Correlation Network Analysis Tool |
| smcfcs | Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification |
| SMCRM | Data Sets for Statistical Methods in Customer Relationship Management by Kumar and Petersen (2012) |
| smcryptoR | ShangMi(SM) Cryptographic Algorithms(SM2/SM3/SM4) |
| smcure | Fit Semiparametric Mixture Cure Models |
| smd | Compute Standardized Mean Differences |
| smdata | Data to Accompany Smithson & Merkle, 2013 |
| smdi | Perform Structural Missing Data Investigations |
| SMDIC | Identification of Somatic Mutation-Driven Immune Cells |
| smdocker | Build 'Docker Images' in 'Amazon SageMaker Studio' using 'Amazon Web Service CodeBuild' |
| smerc | Statistical Methods for Regional Counts |
| smetlite | Read and Write SMET Files |
| SMFilter | Filtering Algorithms for the State Space Models on the Stiefel Manifold |
| smfishHmrf | Hidden Markov Random Field for Spatial Transcriptomic Data |
| smfsb | Stochastic Modelling for Systems Biology |
| smicd | Statistical Methods for Interval-Censored Data |
| smidm | Statistical Modelling for Infectious Disease Management |
| smile | Spatial Misalignment: Interpolation, Linkage, and Estimation |
| smiles | Sequential Method in Leading Evidence Synthesis |
| smirnov | Provides two taxonomic coefficients from E. S. Smirnov "Taxonomic analysis" (1969) book |
| SmithWilsonYieldCurve | Smith-Wilson Yield Curve Construction |
| SMITIDstruct | Data Structure and Manipulations Tool for Host and Viral Population |
| SMITIDvisu | Visualize Data for Host and Viral Population from 'SMITIDstruct' using 'HTMLwidgets' |
| SMLE | Joint Feature Screening via Sparse MLE |
| smlePH | Sieve Maximum Full Likelihood Estimation for the Right-Censored Proportional Hazards Model |
| smlmkalman | Generation and Tracking of Super-Resolution Filamentous Datasets |
| SMLoutliers | Outlier Detection Using Statistical and Machine Learning Methods |
| SMM | Simulation and Estimation of Multi-State Discrete-Time Semi-Markov and Markov Models |
| SMMA | Soft Maximin Estimation for Large Scale Array-Tensor Models |
| SMME | Soft Maximin Estimation for Large Scale Heterogeneous Data |
| smmR | Simulation, Estimation and Reliability of Semi-Markov Models |
| SMMT | The Swiss Municipal Data Merger Tool Maps Municipalities Over Time |
| SMNCensReg | Fitting Univariate Censored Regression Model Under the Family of Scale Mixture of Normal Distributions |
| smof | Scoring Methodology for Ordered Factors |
| smoke | Small Molecule Octet/BLI Kinetics Experiment |
| smoof | Single and Multi-Objective Optimization Test Functions |
| smooth | Forecasting Using State Space Models |
| smoothAPC | Smoothing of Two-Dimensional Demographic Data, Optionally Taking into Account Period and Cohort Effects |
| smoothedLasso | A Framework to Smooth L1 Penalized Regression Operators using Nesterov Smoothing |
| smoother | Functions Relating to the Smoothing of Numerical Data |
| SmoothHazard | Estimation of Smooth Hazard Models for Interval-Censored Data |
| smoothHR | Smooth Hazard Ratio Curves Taking a Reference Value |
| smoothic | Variable Selection Using a Smooth Information Criterion |
| smoothie | Two-Dimensional Field Smoothing |
| smoothmest | Smoothed M-Estimators for 1-Dimensional Location |
| smoothr | Smooth and Tidy Spatial Features |
| smoothROCtime | Smooth Time-Dependent ROC Curve Estimation |
| smoothSurv | Survival Regression with Smoothed Error Distribution |
| smoothtail | Smooth Estimation of GPD Shape Parameter |
| SmoothTensor | A Collection of Smooth Tensor Estimation Methods |
| SmoothWin | Soft Windowing on Linear Regression |
| smoothy | Automatic Estimation of the Most Likely Drug Combination using Smooth Algorithm |
| smoots | Nonparametric Estimation of the Trend and Its Derivatives in TS |
| smosr | Acquire and Explore BEC-SMOS L4 Soil Moisture Data in R |
| smotefamily | A Collection of Oversampling Techniques for Class Imbalance Problem Based on SMOTE |
| SMOTEWB | Imbalanced Resampling using SMOTE with Boosting (SMOTEWB) |
| smovie | Some Movies to Illustrate Concepts in Statistics |
| smpic | Creates Images Sized for Social Media |
| smplot2 | Creating Standalone and Composite Plots in 'ggplot2' for Publications |
| SMPracticals | Practicals for Use with Davison (2003) Statistical Models |
| SMR | Externally Studentized Midrange Distribution |
| sms | Spatial Microsimulation |
| sMSROC | Assessment of Diagnostic and Prognostic Markers |
| smss | Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences" |
| sMTL | Sparse Multi-Task Learning |
| smurf | Sparse Multi-Type Regularized Feature Modeling |
| SMUT | Multi-SNP Mediation Intersection-Union Test |
| SMVar | Structural Model for Variances |
| smvgraph | Various Multivariate Graphics with Variable Choice in Shiny Apps |
| sn | The Skew-Normal and Related Distributions Such as the Skew-t and the SUN |
| sna | Tools for Social Network Analysis |
| snahelper | 'RStudio' Addin for Network Analysis and Visualization |
| Snake | Game of Snake |
| snakecase | Convert Strings into any Case |
| SnakesAndLaddersAnalysis | Play and Analyse the Game of Snakes and Ladders |
| snap | Simple Neural Application |
| snapchatadsR | Get Snapchat Ads Data via the 'Windsor.ai' API |
| snapKrig | Fast Kriging and Geostatistics on Grids with Kronecker Covariance |
| snapshot | Gadget N-body cosmological simulation code snapshot I/O utilities |
| SNBdata | Download Data from the Swiss National Bank (SNB) |
| snem | EM Algorithm for Multivariate Skew-Normal Distribution with Overparametrization |
| snfa | Smooth Non-Parametric Frontier Analysis |
| SNFtool | Similarity Network Fusion |
| snha | Creating Correlation Networks using St. Nicolas House Analysis |
| snn | Stabilized Nearest Neighbor Classifier |
| snotelr | Calculate and Visualize 'SNOTEL' Snow Data and Seasonality |
| snow | Simple Network of Workstations |
| SnowballC | Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library |
| snowboot | Bootstrap Methods for Network Inference |
| snowfall | Easier Cluster Computing (Based on 'snow') |
| snowflakes | Random Snowflake Generator |
| snowFT | Fault Tolerant Simple Network of Workstations |
| snowquery | Query 'Snowflake' Databases with 'SQL' |
| snpAIMeR | Assess the Diagnostic Power of Genomic Marker Combinations |
| SNPannotator | Investigating the Functional Characteristics of Selected SNPs and Their Vicinity Genomic Region |
| SNPassoc | SNPs-Based Whole Genome Association Studies |
| SNPfiltR | Interactively Filter SNP Datasets |
| SNPknock | Knockoffs for Hidden Markov Models and Genetic Data |
| snplinkage | Single Nucleotide Polymorphisms Linkage Disequilibrium Visualizations |
| snplist | Tools to Create Gene Sets |
| sNPLS | NPLS Regression with L1 Penalization |
| snpReady | Preparing Genotypic Datasets in Order to Run Genomic Analysis |
| snpsettest | A Set-Based Association Test using GWAS Summary Statistics |
| sns | Stochastic Newton Sampler (SNS) |
| SNSchart | Sequential Normal Scores in Statistical Process Management |
| SNSeg | Self-Normalization(SN) Based Change-Point Estimation for Time Series |
| SNSequate | Standard and Nonstandard Statistical Models and Methods for Test Equating |
| SNSFdatasets | Download Datasets from the Swiss National Science Foundation (SNF, FNS, SNSF) |
| snSMART | Small N Sequential Multiple Assignment Randomized Trial Methods |
| snvecR | Calculate Earth’s Obliquity and Precession in the Past |
| SNVLFDR | Empirical Bayes Single Nucleotide Variant Calling |
| SOAR | Memory management in R by delayed assignments |
| SOAs | Creation of Stratum Orthogonal Arrays |
| sobolnp | Nonparametric Sobol Estimator with Bootstrap Bandwidth |
| SobolSequence | Sobol Sequences with Better Two-Dimensional Projections |
| soc.ca | Specific Correspondence Analysis for the Social Sciences |
| socceR | Evaluating Sport Tournament Predictions |
| social | Social Autocorrelation |
| socialh | Rank and Social Hierarchy for Gregarious Animals |
| socialmixr | Social Mixing Matrices for Infectious Disease Modelling |
| socialranking | Social Ranking Solutions for Power Relations on Coalitions |
| socialrisk | Identifying Patient Social Risk from Administrative Health Care Data |
| sociome | Operationalizing Social Determinants of Health Data for Researchers |
| socviz | Utility Functions and Data Sets for Data Visualization |
| sodavis | SODA: Main and Interaction Effects Selection for Logistic Regression, Quadratic Discriminant and General Index Models |
| sodium | A Modern and Easy-to-Use Crypto Library |
| sofa | Connector to 'CouchDB' |
| Sofi | Interfaz interactiva con fines didacticos |
| SOFIA | Making Sophisticated and Aesthetical Figures in R |
| SoftBart | Implements the SoftBart Algorithm |
| softbib | Software Bibliographies for R Projects |
| softclassval | Soft Classification Performance Measures |
| SoftClustering | Soft Clustering Algorithms |
| softImpute | Matrix Completion via Iterative Soft-Thresholded SVD |
| SOHPIE | Statistical Approach via Pseudo-Value Information and Estimation |
| SOIL | Sparsity Oriented Importance Learning |
| soilassessment | Assessment Models for Agriculture Soil Conditions and Crop Suitability |
| soilchemistry | Computation of Properties Related to Soil Chemical Environment and Nutrient Availability |
| SoilConservation | Soil and Water Conservation |
| soilDB | Soil Database Interface |
| SoilFDA | Fractal Dimension Analysis of Soil Particle Size Distribution |
| soilfoodwebs | Soil Food Web Analysis |
| SoilFunctionality | Soil Functionality Measurement |
| SoilHyP | Soil Hydraulic Properties |
| soilhypfit | Modelling of Soil Water Retention and Hydraulic Conductivity Data |
| SoilManageR | Calculate Soil Management Indicators for Agricultural Practice Assessment |
| soilphysics | Soil Physical Analysis |
| SoilR | Models of Soil Organic Matter Decomposition |
| SoilSaltIndex | Soil Salinity Indices Generation using Satellite Data |
| SoilTaxonomy | A System of Soil Classification for Making and Interpreting Soil Surveys |
| soiltestcorr | Soil Test Correlation and Calibration |
| SoilTesting | Organic Carbon and Plant Available Nutrient Contents in Soil |
| soiltexture | Functions for Soil Texture Plot, Classification and Transformation |
| soilwater | Implementation of Parametric Formulas for Soil Water Retention or Conductivity Curve |
| Sojourn.Data | Supporting Objects for Sojourn Accelerometer Methods |
| sokoban | Sokoban Game |
| solaR | Radiation and Photovoltaic Systems |
| solaR2 | Radiation and Photovoltaic Systems |
| solarPos | Solar Position Algorithm for Solar Radiation Applications |
| solartime | Utilities Dealing with Solar Time Such as Sun Position and Time of Sunrise |
| solitude | An Implementation of Isolation Forest |
| solrad | Calculating Solar Radiation and Related Variables Based on Location, Time and Topographical Conditions |
| solrium | General Purpose R Interface to 'Solr' |
| solvebio | The Official SolveBio API Client |
| SolveSAPHE | Solver Suite for Alkalinity-PH Equations |
| som | Self-Organizing Map |
| som.nn | Topological k-NN Classifier Based on Self-Organising Maps |
| soma | General-Purpose Optimisation with the Self-Organising Migrating Algorithm |
| SomaDataIO | Input/Output 'SomaScan' Data |
| somaticflags | Database of Somatic Flags |
| SOMbrero | SOM Bound to Realize Euclidean and Relational Outputs |
| someMTP | Some Multiple Testing Procedures |
| SOMEnv | SOM Algorithm for the Analysis of Multivariate Environmental Data |
| SOMMD | Self Organising Maps for the Analysis of Molecular Dynamics Data |
| sommer | Solving Mixed Model Equations in R |
| SOMnmR | Analysis of Soil Organic Matter using Nuclear Magnetic Resonance |
| somspace | Spatial Analysis with Self-Organizing Maps |
| sonar | Fundamental Formulas for Sonar |
| SongEvo | An Individual-Based Model of Bird Song Evolution |
| sonicLength | Estimating Abundance of Clones from DNA Fragmentation Data |
| sonicscrewdriver | Bioacoustic Analysis and Publication Tools |
| sonify | Data Sonification - Turning Data into Sound |
| SOP | Generalised Additive P-Spline Regression Models Estimation |
| SOPC | The Sparse Online Principal Component Estimation Algorithm |
| SOPIE | Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar |
| soptdmaeA | Sequential Optimal Designs for Two-Colour cDNA Microarray Experiments |
| soql | Helps Make Socrata Open Data API Calls |
| SOR | Estimation using Sequential Offsetted Regression |
| sorcering | Soil Organic Carbon and CN Ratio Driven Nitrogen Modelling Framework |
| sorocs | A Bayesian Semiparametric Approach to Correlated ROC Surfaces |
| SorptionAnalysis | Static Adsorption Experiment Plotting and Analysis |
| sortable | Drag-and-Drop in 'shiny' Apps with 'SortableJS' |
| SortedEffects | Estimation and Inference Methods for Sorted Causal Effects and Classification Analysis |
| sorvi | Functions for Finnish Open Data |
| sos | Search Contributed R Packages, Sort by Package |
| sotkanet | Sotkanet Open Data Access and Analysis |
| sotu | United States Presidential State of the Union Addresses |
| sound | A Sound Interface for R |
| soundClass | Sound Classification Using Convolutional Neural Networks |
| soundecology | Soundscape Ecology |
| SoundexBR | Phonetic-Coding for Portuguese |
| soundgen | Sound Synthesis and Acoustic Analysis |
| SoundShape | Sound Waves Onto Morphometric Data |
| SoupX | Single Cell mRNA Soup eXterminator |
| sourcetools | Tools for Reading, Tokenizing and Parsing R Code |
| SouthParkRshiny | Data and 'Shiny' Application for the Show 'SouthPark' |
| sovereign | State-Dependent Empirical Analysis |
| sox | Structured Learning in Time-Dependent Cox Models |
| SoyNAM | Soybean Nested Association Mapping Dataset |
| SoyURT | USDA Northern Region Uniform Soybean Tests Dataset |
| sp | Classes and Methods for Spatial Data |
| SP2000 | Catalogue of Life Toolkit |
| sp23design | Design and Simulation of Seamless Phase II-III Clinical Trials |
| spaa | SPecies Association Analysis |
| spAbundance | Univariate and Multivariate Spatial Modeling of Species Abundance |
| SpaCCI | Spatially Aware Cell-Cell Interaction Analysis |
| spacefillr | Space-Filling Random and Quasi-Random Sequences |
| spacejamr | Simulate Spatial Bernoulli Networks |
| spaceNet | Latent Space Models for Multidimensional Networks |
| spacesRGB | Standard and User-Defined RGB Color Spaces, with Conversion Between RGB and CIE XYZ and Lab |
| spacesXYZ | CIE XYZ and some of Its Derived Color Spaces |
| spacetime | Classes and Methods for Spatio-Temporal Data |
| SpaceTimeBSS | Blind Source Separation for Multivariate Spatio-Temporal Data |
| SpaCOAP | High-Dimensional Spatial Covariate-Augmented Overdispersed Poisson Factor Model |
| spacyr | Wrapper to the 'spaCy' 'NLP' Library |
| SPADAR | Spherical Projections of Astronomical Data |
| spAddins | A Set of RStudio Addins |
| SpadeR | Species-Richness Prediction and Diversity Estimation with R |
| SpaDES | Develop and Run Spatially Explicit Discrete Event Simulation Models |
| SpaDES.core | Core Utilities for Developing and Running Spatially Explicit Discrete Event Models |
| SpaDES.tools | Additional Tools for Developing Spatially Explicit Discrete Event Simulation (SpaDES) Models |
| spaero | Software for Project AERO |
| spagmix | Artificial Spatial and Spatio-Temporal Densities on Bounded Windows |
| spam | SPArse Matrix |
| spam64 | 64-Bit Extension of the SPArse Matrix R Package 'spam' |
| spaMM | Mixed-Effect Models, with or without Spatial Random Effects |
| spanish | Translate Quantities from Strings to Integer and Back. Misc Functions on Spanish Data |
| spANOVA | Analysis of Field Trials with Geostatistics & Spatial AR Models |
| spant | MR Spectroscopy Analysis Tools |
| sparcl | Perform Sparse Hierarchical Clustering and Sparse K-Means Clustering |
| spark.sas7bdat | Read in 'SAS' Data ('.sas7bdat' Files) into 'Apache Spark' |
| sparkavro | Load Avro file into 'Apache Spark' |
| sparkbq | Google 'BigQuery' Support for 'sparklyr' |
| sparkhail | A 'Sparklyr' Extension for 'Hail' |
| sparkline | 'jQuery' Sparkline 'htmlwidget' |
| sparklyr | R Interface to Apache Spark |
| sparklyr.flint | Sparklyr Extension for 'Flint' |
| sparklyr.nested | A 'sparklyr' Extension for Nested Data |
| sparktex | Generate LaTeX sparklines in R |
| sparktf | Interface for 'TensorFlow' 'TFRecord' Files with 'Apache Spark' |
| sparkwarc | Load WARC Files into Apache Spark |
| sparkxgb | Interface for 'XGBoost' on 'Apache Spark' |
| sparr | Spatial and Spatiotemporal Relative Risk |
| SPARRAfairness | Analysis of Differential Behaviour of SPARRA Score Across Demographic Groups |
| sparrpowR | Power Analysis to Detect Spatial Relative Risk Clusters |
| sparseBC | Sparse Biclustering of Transposable Data |
| SparseBiplots | 'HJ-Biplot' using Different Ways of Penalization Plotting with 'ggplot2' |
| SparseChol | Sparse Matrix C++ Classes Including Sparse Cholesky LDL Decomposition of Symmetric Matrices |
| sparseCov | Sparse Covariance Estimation Based on Thresholding |
| SparseDC | Implementation of SparseDC Algorithm |
| sparseDFM | Estimate Dynamic Factor Models with Sparse Loadings |
| sparsediscrim | Sparse and Regularized Discriminant Analysis |
| sparseEigen | Computation of Sparse Eigenvectors of a Matrix |
| sparseFLMM | Functional Linear Mixed Models for Irregularly or Sparsely Sampled Data |
| SparseFunClust | Sparse Functional Clustering |
| sparsegl | Sparse Group Lasso |
| SparseGrid | Sparse grid integration in R |
| sparseHessianFD | Numerical Estimation of Sparse Hessians |
| sparseIndexTracking | Design of Portfolio of Stocks to Track an Index |
| sparseinv | Computation of the Sparse Inverse Subset |
| sparseLDA | Sparse Discriminant Analysis |
| SparseLPM | The Sparse Latent Position Model for Nonnegative Interaction Data |
| sparseLRMatrix | Represent and Use Sparse + Low Rank Matrices |
| sparseLTSEigen | RcppEigen back end for sparse least trimmed squares regression |
| SparseM | Sparse Linear Algebra |
| sparseMatEst | Sparse Matrix Estimation and Inference |
| SparseMDC | Implementation of SparseMDC Algorithm |
| SPARSEMODr | SPAtial Resolution-SEnsitive Models of Outbreak Dynamics |
| SparseMSE | 'Multiple Systems Estimation for Sparse Capture Data' |
| sparseMVN | Multivariate Normal Functions for Sparse Covariance and Precision Matrices |
| sparsenet | Fit Sparse Linear Regression Models via Nonconvex Optimization |
| sparsepca | Sparse Principal Component Analysis (SPCA) |
| sparsepp | 'Rcpp' Interface to 'sparsepp' |
| sparseR | Variable Selection under Ranked Sparsity Principles for Interactions and Polynomials |
| sparsereg | Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data |
| sparseSEM | Elastic Net Penalized Maximum Likelihood for Structural Equation Models with Network GPT Framework |
| sparsestep | SparseStep Regression |
| sparsesvd | Sparse Truncated Singular Value Decomposition (from 'SVDLIBC') |
| sparseSVM | Solution Paths of Sparse High-Dimensional Support Vector Machine with Lasso or Elastic-Net Regularization |
| SparseTSCGM | Sparse Time Series Chain Graphical Models |
| sparsevar | Sparse VAR/VECM Models Estimation |
| sparsevb | Spike-and-Slab Variational Bayes for Linear and Logistic Regression |
| sparsevctrs | Sparse Vectors for Use in Data Frames |
| SparseVFC | Sparse Vector Field Consensus for Vector Field Learning |
| sparsio | I/O Operations with Sparse Matrices |
| sparta | Sparse Tables |
| SPARTAAS | Statistical Pattern Recognition and daTing using Archaeological Artefacts assemblageS |
| sparvaride | Variance Identification in Sparse Factor Analysis |
| SPAS | Stratified-Petersen Analysis System |
| spass | Study Planning and Adaptation of Sample Size |
| spate | Spatio-Temporal Modeling of Large Data Using a Spectral SPDE Approach |
| SpatEntropy | Spatial Entropy Measures |
| SPAtest | Score Test and Meta-Analysis Based on Saddlepoint Approximation |
| SpatFD | Functional Geostatistics: Univariate and Multivariate Functional Spatial Prediction |
| SpatGC | Bayesian Modeling of Spatial Count Data |
| spatgeom | Geometric Spatial Point Analysis |
| spatgraphs | Graph Edge Computations for Spatial Point Patterns |
| SpatGRID | Spatial Grid Generation from Longitude and Latitude List |
| spaths | Shortest Paths Between Points in Grids |
| spatial | Functions for Kriging and Point Pattern Analysis |
| SpatialAcc | Spatial Accessibility Measures |
| SpatialBSS | Blind Source Separation for Multivariate Spatial Data |
| spatialCovariance | Computation of Spatial Covariance Matrices for Data on Rectangles |
| SpatialDDLS | Deconvolution of Spatial Transcriptomics Data Based on Neural Networks |
| spatialEco | Spatial Analysis and Modelling Utilities |
| SpatialEpi | Methods and Data for Spatial Epidemiology |
| SpatialExtremes | Modelling Spatial Extremes |
| SpatialfdaR | Spatial Functional Data Analysis |
| SpatialGEV | Fit Spatial Generalized Extreme Value Models |
| SpatialGraph | The SpatialGraph Class and Utilities |
| spatialising | Ising Model for Spatial Data |
| SpatialKDE | Kernel Density Estimation for Spatial Data |
| SpatialKWD | Spatial KWD for Large Spatial Maps |
| SpatialML | Spatial Machine Learning |
| SpatialNP | Multivariate Nonparametric Methods Based on Spatial Signs and Ranks |
| SpatialPack | Tools for Assessment the Association Between Two Spatial Processes |
| SpatialPOP | Generation of Spatial Data with Spatially Varying Model Parameter |
| SpatialPosition | Spatial Position Models |
| spatialprobit | Spatial Probit Models |
| SpatialRDD | Conduct Multiple Types of Geographic Regression Discontinuity Designs |
| spatialreg | Spatial Regression Analysis |
| SpatialRegimes | Spatial Constrained Clusterwise Regression |
| spatialRF | Easy Spatial Modeling with Random Forest |
| spatialrisk | Calculating Spatial Risk |
| SpatialRoMLE | Robust Maximum Likelihood Estimation for Spatial Error Model |
| spatialsample | Spatial Resampling Infrastructure |
| spatialTIME | Spatial Analysis of Vectra Immunoflourescent Data |
| SpatialTools | Tools for Spatial Data Analysis |
| SpatialVS | Spatial Variable Selection |
| SpatialVx | Spatial Forecast Verification |
| spatialwarnings | Spatial Early Warning Signals of Ecosystem Degradation |
| spatialwidget | Formats Spatial Data for Use in Htmlwidgets |
| SpatMCA | Regularized Spatial Maximum Covariance Analysis |
| SpaTopic | Topic Inference to Identify Tissue Architecture in Multiplexed Images |
| SpatPCA | Regularized Principal Component Analysis for Spatial Data |
| spatPomp | Inference for Spatiotemporal Partially Observed Markov Processes |
| SpATS | Spatial Analysis of Field Trials with Splines |
| spatsoc | Group Animal Relocation Data by Spatial and Temporal Relationship |
| spatstat | Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests |
| spatstat.data | Datasets for 'spatstat' Family |
| spatstat.explore | Exploratory Data Analysis for the 'spatstat' Family |
| spatstat.geom | Geometrical Functionality of the 'spatstat' Family |
| spatstat.gui | Interactive Graphics Functions for the 'spatstat' Package |
| spatstat.Knet | Extension to 'spatstat' for Large Datasets on a Linear Network |
| spatstat.linnet | Linear Networks Functionality of the 'spatstat' Family |
| spatstat.local | Extension to 'spatstat' for Local Composite Likelihood |
| spatstat.model | Parametric Statistical Modelling and Inference for the 'spatstat' Family |
| spatstat.random | Random Generation Functionality for the 'spatstat' Family |
| spatstat.sparse | Sparse Three-Dimensional Arrays and Linear Algebra Utilities |
| spatstat.univar | One-Dimensional Probability Distribution Support for the 'spatstat' Family |
| spatstat.utils | Utility Functions for 'spatstat' |
| spatsurv | Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models |
| SPB | Simple Progress Bars for Procedural Coding |
| spbabel | Convert Spatial Data Using Tidy Tables |
| spbal | Spatially Balanced Sampling Algorithms |
| spBayes | Univariate and Multivariate Spatial-Temporal Modeling |
| spBayesSurv | Bayesian Modeling and Analysis of Spatially Correlated Survival Data |
| spBFA | Spatial Bayesian Factor Analysis |
| spBPS | Bayesian Predictive Stacking for Scalable Geospatial Transfer Learning |
| Spbsampling | Spatially Balanced Sampling |
| spc | Statistical Process Control – Calculation of ARL and Other Control Chart Performance Measures |
| spc4sts | Statistical Process Control for Stochastic Textured Surfaces |
| spcadjust | Functions for Calibrating Control Charts |
| SPCALDA | A New Reduced-Rank Linear Discriminant Analysis Method |
| SPCAvRP | Sparse Principal Component Analysis via Random Projections (SPCAvRP) |
| SPCDAnalyze | Design and Analyze Studies using the Sequential Parallel Comparison Design |
| SPCompute | Compute Power or Sample Size for GWAS with Covariate Effect |
| spconf | Computing Scales of Spatial Smoothing for Confounding Adjustment |
| spcosa | Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata |
| spcov | Sparse Estimation of a Covariance Matrix |
| spCP | Spatially Varying Change Points |
| spcr | Sparse Principal Component Regression |
| spd | Semi Parametric Distribution |
| spData | Datasets for Spatial Analysis |
| spDates | Analysis of Spatial Gradients in Radiocarbon Dates |
| spdep | Spatial Dependence: Weighting Schemes, Statistics |
| spdesign | Designing Stated Preference Experiments |
| spdl | Easier Use of 'RcppSpdlog' Functions via Wrapper |
| spdownscale | Spatial Downscaling Using Bias Correction Approach |
| spduration | Split-Population Duration (Cure) Regression |
| spdynmod | Spatio-Dynamic Wetland Plant Communities Model |
| speakeasyR | Fast and Robust Multi-Scale Graph Clustering |
| speakr | A Wrapper for the Phonetic Software 'Praat' |
| speaq | Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations |
| spearmanCI | Jackknife Euclidean / Empirical Likelihood Inference for Spearman's Rho |
| spec | A Data Specification Format and Interface |
| speccurvieR | Easy, Fast, and Pretty Specification Curve Analysis |
| SpecDetec | Change Points Detection with Spectral Clustering |
| SpecHelpers | Spectroscopy Related Utilities |
| SPECIES | Statistical Package for Species Richness Estimation |
| specieschrom | The Species Chromatogram |
| SPECK | Receptor Abundance Estimation using Reduced Rank Reconstruction and Clustered Thresholding |
| specklestar | Reduction of Speckle Data from BTA 6-m Telescope |
| specr | Conducting and Visualizing Specification Curve Analyses |
| specs | Single-Equation Penalized Error-Correction Selector (SPECS) |
| SpecsVerification | Forecast Verification Routines for Ensemble Forecasts of Weather and Climate |
| spectacles | Storing, Manipulating and Analysis Spectroscopy and Associated Data |
| spectator | Interface to the 'Spectator Earth' API |
| spectr | Calculate the Periodogram of a Time-Course |
| spectral | Common Methods of Spectral Data Analysis |
| spectralAnalysis | Pre-Process, Visualize and Analyse Spectral Data |
| spectralAnomaly | Detect Anomalies Using the Spectral Residual Algorithm |
| SpectralClMixed | Spectral Clustering for Mixed Type Data |
| spectralGP | Approximate Gaussian Processes Using the Fourier Basis |
| spectralGraphTopology | Learning Graphs from Data via Spectral Constraints |
| SpectralMap | Diffusion Map and Spectral Map |
| spectralR | Obtain and Visualize Spectral Reflectance Data for Earth Surface Polygons |
| Spectran | Visual and Non-Visual Spectral Analysis of Light |
| spectre | Predict Regional Community Composition |
| spectrino | Spectra Viewer, Organizer, Data Preparation and Property Blocks |
| Spectrum | Fast Adaptive Spectral Clustering for Single and Multi-View Data |
| sped | Multi-Gene Descent Probabilities |
| spedecon | Smoothness-Penalized Deconvolution for Density Estimation Under Measurement Error |
| SPEDInstabR | Estimation of the Relative Importance of Factors Affecting Species Distribution Based on Stability Concept |
| speech | Legislative Speeches |
| speechbr | Access the Speechs and Speaker's Informations of House of Representatives of Brazil |
| speedglm | Fitting Linear and Generalized Linear Models to Large Data Sets |
| speedyBBT | Efficient Bayesian Inference for the Bradley–Terry Model |
| speedycode | Automate Code for Adding Labels, Recoding and Renaming Variables, and Converting ASCII Files |
| speedytax | Rapidly Import Classifier Results into 'phyloseq' |
| spef | Semiparametric Estimating Functions |
| speff2trial | Semiparametric Efficient Estimation for a Two-Sample Treatment Effect |
| SPEI | Calculation of the Standardized Precipitation-Evapotranspiration Index |
| spellcheckr | Correct the Spelling of a Given Word in the English Language |
| spelling | Tools for Spell Checking in R |
| spemd | A Bi-Dimensional Implementation of the Empirical Mode Decomposition for Spatial Data |
| sperich | Auxiliary Functions to Estimate Centers of Biodiversity |
| sperrorest | Perform Spatial Error Estimation and Variable Importance Assessment |
| SpeTestNP | Non-Parametric Tests of Parametric Specifications |
| SPEV | Unsmoothed and Smoothed Penalized PCA using Nesterov Smoothing |
| spex | Spatial Extent Tools |
| spfa | Semi-Parametric Factor Analysis |
| spfda | Function-on-Scalar Regression with Group-Bridge Penalty |
| spfilteR | Semiparametric Spatial Filtering with Eigenvectors in (Generalized) Linear Models |
| spFSR | Feature Selection and Ranking via Simultaneous Perturbation Stochastic Approximation |
| spFW | Hierarchical Spatial Finlay-Wilkinson Model |
| spGARCH | Spatial ARCH and GARCH Models (spGARCH) |
| spgs | Statistical Patterns in Genomic Sequences |
| spgwr | Geographically Weighted Regression |
| spheredata | Students' Performance Dataset in Physics Education Research (SPHERE) |
| SphereOptimize | Optimization on a Unit Sphere |
| spherepc | Spherical Principal Curves |
| sphereplot | Spherical Plotting |
| spheresmooth | Piecewise Geodesic Smoothing for Spherical Data |
| SphericalCubature | Numerical Integration over Spheres and Balls in n-Dimensions; Multivariate Polar Coordinates |
| sphet | Estimation of Spatial Autoregressive Models with and without Heteroskedastic Innovations |
| sphunif | Uniformity Tests on the Circle, Sphere, and Hypersphere |
| SpiceFP | Sparse Method to Identify Joint Effects of Functional Predictors |
| spider | Species Identity and Evolution in R |
| spiderbar | Parse and Test Robots Exclusion Protocol Files and Rules |
| spidR | Spider Knowledge Online |
| SPIGA | Compute SPI Index using the Methods Genetic Algorithm and Maximum Likelihood |
| spikes | Detecting Election Fraud from Irregularities in Vote-Share Distributions |
| spikeslab | Prediction and Variable Selection Using Spike and Slab Regression |
| spikeSlabGAM | Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models |
| Spillover | Spillover/Connectedness Index Based on VAR Modelling |
| SPINA | Structure Parameter Inference Approach |
| spINAR | (Semi)Parametric Estimation and Bootstrapping of INAR Models |
| spinBayes | Semi-Parametric Gene-Environment Interaction via Bayesian Variable Selection |
| spind | Spatial Methods and Indices |
| spinifex | Manual Tours, Manual Control of Dynamic Projections of Numeric Multivariate Data |
| spinner | An Implementation of Graph Net Architecture Based on 'torch' |
| spinyReg | Sparse Generative Model and Its EM Algorithm |
| spiralize | Visualize Data on Spirals |
| spiritR | Template for Clinical Trial Protocol |
| spiro | Manage Data from Cardiopulmonary Exercise Testing |
| splancs | Spatial and Space-Time Point Pattern Analysis |
| splash | Simple Process-Led Algorithms for Simulating Habitats |
| spldv | Spatial Models for Limited Dependent Variables |
| SPLICE | Synthetic Paid Loss and Incurred Cost Experience (SPLICE) Simulator |
| splines2 | Regression Spline Functions and Classes |
| splinetree | Longitudinal Regression Trees and Forests |
| Splinets | Functional Data Analysis using Splines and Orthogonal Spline Bases |
| SPlit | Split a Dataset for Training and Testing |
| splitfngr | Combined Evaluation and Split Access of Functions |
| SplitGLM | Split Generalized Linear Models |
| splithalf | Calculate Task Split Half Reliability Estimates |
| splithalfr | Estimate Split-Half Reliabilities |
| SplitKnockoff | Split Knockoffs for Structural Sparsity |
| SplitReg | Split Regularized Regression |
| splitSelect | Best Split Selection Modeling for Low-Dimensional Data |
| SplitSoftening | Softening Splits in Decision Trees |
| SplitSplitPlot | Analysis of Split-Split-Plot Experiments (Analise De Experimentos Em Parcela Subsubdividida) |
| splitstackshape | Stack and Reshape Datasets After Splitting Concatenated Values |
| splitTools | Tools for Data Splitting |
| splm | Econometric Models for Spatial Panel Data |
| splmm | Simultaneous Penalized Linear Mixed Effects Models |
| splot | Simplified Plotting for Data Exploration |
| spls | Sparse Partial Least Squares (SPLS) Regression and Classification |
| splus2R | Supplemental S-PLUS Functionality in R |
| splusTimeDate | Times and Dates from 'S-PLUS' |
| splusTimeSeries | Time Series from 'S-PLUS' |
| splutil | Utility Functions for Common Base-R Problems Relating to Lists |
| spm | Spatial Predictive Modeling |
| spm2 | Spatial Predictive Modeling |
| spMaps | Europe SpatialPolygonsDataFrame Builder |
| spMC | Continuous-Lag Spatial Markov Chains |
| SPmlficmcm | Semiparametric Maximum Likelihood Method for Interactions Gene-Environment in Case-Mother Control-Mother Designs |
| spmodel | Spatial Statistical Modeling and Prediction |
| spmoran | Fast Spatial and Spatio-Temporal Regression using Moran Eigenvectors |
| spnaf | Spatial Network Autocorrelation for Flow Data |
| SpNMF | Supervised NMF |
| spnn | Scale Invariant Probabilistic Neural Networks |
| spNNGP | Spatial Regression Models for Large Datasets using Nearest Neighbor Gaussian Processes |
| spocc | Interface to Species Occurrence Data Sources |
| spOccupancy | Single-Species, Multi-Species, and Integrated Spatial Occupancy Models |
| spoiler | Blur 'HTML' Elements in 'Shiny' Applications Using 'Spoiler-Alert.js' |
| spongebob | SpongeBob-Case Converter : spOngEboB-CASe CoNVertER |
| spongecake | Transform a Movie into a Synthetic Picture |
| spooky | Time Feature Extrapolation Using Spectral Analysis and Jack-Knife Resampling |
| spork | Generalized Label Formatting |
| sport | Sequential Pairwise Online Rating Techniques |
| SPORTSCausal | Spillover Time Series Causal Inference |
| SportsTour | Display Tournament Fixtures using Knock Out and Round Robin Techniques |
| sportyR | Plot Scaled 'ggplot' Representations of Sports Playing Surfaces |
| spotidy | Providing Convenience Functions to Connect R with the Spotify API |
| spotifyr | R Wrapper for the 'Spotify' Web API |
| spotoroo | Spatiotemporal Clustering of Satellite Hot Spot Data |
| SPOUSE | Scatter Plots Over-Viewed Using Summary Ellipses |
| SPPcomb | Combining Different Spatial Datasets in Cancer Risk Estimation |
| SpPOP | Generation of Spatial Population under Different Levels of Relationships among Variables |
| spray | Sparse Arrays and Multivariate Polynomials |
| spreadr | Simulating Spreading Activation in a Network |
| SPREDA | Statistical Package for Reliability Data Analysis |
| SPreg | Bias Reduction in the Skew-Probit Model for a Binary Response |
| spreval | Evaluation of Sprinkler Irrigation Uniformity and Efficiency |
| sprex | Calculate Species Richness and Extrapolation Metrics |
| springer | Sparse Group Variable Selection for Gene-Environment Interactions in the Longitudinal Study |
| springpheno | Spring Phenological Indices |
| spRingsteen | All Things Data and Springsteen |
| sprintr | Sparse Reluctant Interaction Modeling |
| sprtt | Sequential Probability Ratio Tests Toolbox |
| sps | Sequential Poisson Sampling |
| spsComps | 'systemPipeShiny' UI and Server Components |
| spselect | Selecting Spatial Scale of Covariates in Regression Models |
| spsh | Estimation and Prediction of Parameters of Various Soil Hydraulic Property Models |
| SPSL | Site Percolation on Square Lattices (SPSL) |
| SPSP | Selection by Partitioning the Solution Paths |
| spStack | Bayesian Geostatistics Using Predictive Stacking |
| spsur | Spatial Seemingly Unrelated Regression Models |
| spsurv | Bernstein Polynomial Based Semiparametric Survival Analysis |
| spsurvey | Spatial Sampling Design and Analysis |
| spsUtil | 'systemPipeShiny' Utility Functions |
| spTDyn | Spatially Varying and Spatio-Temporal Dynamic Linear Models |
| SpTe2M | Nonparametric Modeling and Monitoring of Spatio-Temporal Data |
| spThin | Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models |
| spTimer | Spatio-Temporal Bayesian Modelling |
| sptotal | Predicting Totals and Weighted Sums from Spatial Data |
| spup | Spatial Uncertainty Propagation Analysis |
| spuRs | Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R" |
| SPUTNIK | Spatially Automatic Denoising for Imaging Mass Spectrometry Toolkit |
| SPYvsSPY | Spy vs. Spy Data |
| SQI | Soil Quality Index |
| SQL | Executes 'SQL' Statements |
| sqlcaser | 'SQL' Case Statement Generator |
| sqldf | Manipulate R Data Frames Using SQL |
| sqlhelper | Easier 'SQL' Integration |
| sqlHelpers | Collection of 'SQL' Utilities for 'T-SQL' and 'Postgresql' |
| sqliter | Connection wrapper to SQLite databases |
| sqliteutils | Utility Functions for 'SQLite' |
| SQLove | Execute 'SQL' Scripts in 'R' Containing Multiple Queries |
| sqlparseR | Wrapper for 'Python' Module 'sqlparse': Parse, Split, and Format 'SQL' |
| SqlRender | Rendering Parameterized SQL and Translation to Dialects |
| sqlscore | Utilities for Generating SQL Queries from Model Objects |
| sqlstrings | Map 'SQL' Code to R Lists |
| sqltargets | 'Targets' Extension for 'SQL' Queries |
| SQMtools | Analyze Results Generated by the 'SqueezeMeta' Pipeline |
| SQN | Subset Quantile Normalization |
| SQRL | Enhances Interaction with 'ODBC' Databases |
| squant | Subgroup Identification Based on Quantitative Objectives |
| SQUAREM | Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms |
| squash | Color-Based Plots for Multivariate Visualization |
| squat | Statistics for Quaternion Temporal Data |
| SqueakR | An Experiment Interface for 'DeepSqueak' Bioacoustics Research |
| squeezy | Group-Adaptive Elastic Net Penalised Generalised Linear Models |
| squid | Statistical Quantification of Individual Differences |
| sr | Smooth Regression - The Gamma Test and Tools |
| sra | Selection Response Analysis |
| srcpkgs | R Source Packages Manager |
| srcr | Simplify Connections to Database Sources |
| SRCS | Statistical Ranking Color Scheme for Multiple Pairwise Comparisons |
| sRDA | Sparse Redundancy Analysis |
| sRdpData | Strategies of Resistance Data Project |
| sreg | Stratified Randomized Experiments |
| sregsurvey | Semiparametric Model-Assisted Estimation in Finite Populations |
| srlars | Split Robust Least Angle Regression |
| srlTS | Sparsity-Ranked Lasso for Time Series |
| srm | Structural Equation Modeling for the Social Relations Model |
| sRNAGenetic | Analysis of Small RNA Expression Changes in Hybrid Plants |
| srp | Smooth-Rough Partitioning of the Regression Coefficients |
| srppp | Read the Swiss Register of Plant Protection Products |
| SRS | Scaling with Ranked Subsampling |
| srt | Read Subtitle Files as Tabular Data |
| SRTsim | Simulator for Spatially Resolved Transcriptomics |
| SRTtools | Adjust Srt File to Get Better Experience when Watching Movie |
| srvyr | 'dplyr'-Like Syntax for Summary Statistics of Survey Data |
| ss3sim | Fisheries Stock Assessment Simulation Testing with Stock Synthesis |
| ssaBSS | Stationary Subspace Analysis |
| ssanv | Sample Size Adjusted for Nonadherence or Variability of Input Parameters |
| SSBtools | Statistics Norway's Miscellaneous Tools |
| ssc | Semi-Supervised Classification Methods |
| sscor | Robust Correlation Estimation and Testing Based on Spatial Signs |
| ssd4mosaic | Web Application for the SSD Module of the MOSAIC Platform |
| ssddata | Species Sensitivity Distribution Data |
| SSDforR | Functions to Analyze Single System Data |
| ssdGSA | Single Sample Directional Gene Set Analysis |
| SSDM | Stacked Species Distribution Modelling |
| sSDR | Tools Developed for Structured Sufficient Dimension Reduction (sSDR) |
| ssdtools | Species Sensitivity Distributions |
| sse | Sample Size Estimation |
| SSEparser | Parse Server-Sent Events |
| ssev | Sample Size Computation for Fixed N with Optimal Reward |
| ssfa | Spatial Stochastic Frontier Analysis |
| ssfit | Fitting of Parametric Models using Summary Statistics |
| SSGL | Spike-and-Slab Group Lasso for Group-Regularized Generalized Linear Models |
| ssgraph | Bayesian Graph Structure Learning using Spike-and-Slab Priors |
| ssh | Secure Shell (SSH) Client for R |
| SSHAARP | Searching Shared HLA Amino Acid Residue Prevalence |
| Sshaped | Nonparametric, Tuning-Free Estimation of S-Shaped Functions |
| sship | Tool for Secure Shipment of Content |
| ssifs | Stochastic Search Inconsistency Factor Selection |
| SSIMmap | The Structural Similarity Index Measure for Maps |
| ssimparser | Standard Schedules Information Parser |
| ssize.fdr | Sample Size Calculations for Microarray Experiments |
| ssizeRNA | Sample Size Calculation for RNA-Seq Experimental Design |
| SSLR | Semi-Supervised Classification, Regression and Clustering Methods |
| SSM | Fit and Analyze Smooth Supersaturated Models |
| ssmn | Skew Scale Mixtures of Normal Distributions |
| ssmodels | Sample Selection Models |
| ssMousetrack | Bayesian State-Space Modeling of Mouse-Tracking Experiments via Stan |
| ssMRCD | Spatially Smoothed MRCD Estimator |
| ssmrob | Robust Estimation and Inference in Sample Selection Models |
| ssmsn | Scale-Shape Mixtures of Skew-Normal Distributions |
| ssMutPA | Single-Sample Mutation-Based Pathway Analysis |
| SSN2 | Spatial Modeling on Stream Networks |
| SSNbayes | Bayesian Spatio-Temporal Analysis in Stream Networks |
| SSNbler | Assemble 'SSN' Objects |
| SSOSVM | Stream Suitable Online Support Vector Machines |
| SSP | Simulated Sampling Procedure for Community Ecology |
| SSplots | Stock Status Plots (SSPs) |
| sspse | Estimating Hidden Population Size using Respondent Driven Sampling Data |
| ssr | Semi-Supervised Regression Methods |
| SSRA | Sakai Sequential Relation Analysis |
| SSrat | Two-Dimensional Sociometric Status Determination with Rating Scales |
| ssrm.logmer | Sample Size Determination for Longitudinal Designs with Binary Outcome |
| SSRMST | Sample Size Calculation using Restricted Mean Survival Time |
| ssrn | Scan Statistics for Railway Network |
| SSRTcalc | Easy SSRT Calculation |
| sss | Import Files in the Triple-s (Standard Survey Structure) Format |
| sssc | Same Species Sample Contamination Detection |
| SSsimple | State Space Models |
| Sstack | Bootstrap Stacking of Random Forest Models for Heterogeneous Data |
| sstvars | Toolkit for Reduced Form and Structural Smooth Transition Vector Autoregressive Models |
| SSVS | Functions for Stochastic Search Variable Selection (SSVS) |
| ssw | Striped Smith-Waterman Algorithm for Sequence Alignment using SIMD |
| ssym | Fitting Semi-Parametric log-Symmetric Regression Models |
| st | Shrinkage t Statistic and Correlation-Adjusted t-Score |
| sta | Seasonal Trend Analysis for Time Series Imagery in R |
| stabiliser | Stabilising Variable Selection |
| stability | Stability Analysis of Genotype by Environment Interaction (GEI) |
| StabilityApp | Stability Analysis App for GEI in Multi-Environment Trials |
| StabilizedRegression | Stabilizing Regression and Variable Selection |
| stabilo | Stabilometric Signal Quantification |
| stable | Probability Functions and Generalized Regression Models for Stable Distributions |
| stabledist | Stable Distribution Functions |
| StableEstim | Estimate the Four Parameters of Stable Laws using Different Methods |
| stableGR | A Stable Gelman-Rubin Diagnostic for Markov Chain Monte Carlo |
| stablelearner | Stability Assessment of Statistical Learning Methods |
| stablespec | Stable Specification Search in Structural Equation Models |
| stabm | Stability Measures for Feature Selection |
| stabs | Stability Selection with Error Control |
| staccuracy | Standardized Accuracy and Other Model Performance Metrics |
| stackgbm | Stacked Gradient Boosting Machines |
| StackImpute | Tools for Analysis of Stacked Multiple Imputations |
| stacking | Building Predictive Models with Stacking |
| stacks | Tidy Model Stacking |
| stacomiR | Fish Migration Monitoring |
| stacomirtools | Connection Class for Package stacomiR |
| stagedtrees | Staged Event Trees |
| stagePop | Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time |
| staggered | Efficient Estimation Under Staggered Treatment Timing |
| StakeholderAnalysis | Measuring Stakeholder Influence |
| StAMPP | Statistical Analysis of Mixed Ploidy Populations |
| stampr | Spatial Temporal Analysis of Moving Polygons |
| stan4bart | Bayesian Additive Regression Trees with Stan-Sampled Parametric Extensions |
| STAND | Statistical Analysis of Non-Detects |
| standardize | Tools for Standardizing Variables for Regression in R |
| standardlastprofile | Data Package for BDEW Standard Load Profiles in Electricity |
| standartox | Ecotoxicological Information from the Standartox Database |
| standby | Alerts, Notifications and Loading Screen in 'Shiny' |
| StanHeaders | C++ Header Files for Stan |
| StanMoMo | Bayesian Mortality Modelling with 'Stan' |
| stapler | Simultaneous Truth and Performance Level Estimation |
| staplr | A Toolkit for PDF Files |
| staRdom | PARAFAC Analysis of EEMs from DOM |
| STAREG | An Empirical Bayes Approach for Replicability Analysis Across Two Studies |
| stargazer | Well-Formatted Regression and Summary Statistics Tables |
| starm | Spatio-Temporal Autologistic Regression Model |
| starma | Modelling Space Time AutoRegressive Moving Average (STARMA) Processes |
| starnet | Stacked Elastic Net |
| starry | Explore Data with Plots and Tables |
| stars | Spatiotemporal Arrays, Raster and Vector Data Cubes |
| starschemar | Obtaining Stars from Flat Tables |
| starsExtra | Miscellaneous Functions for Working with 'stars' Rasters |
| starsTileServer | A Dynamic Tile Server for R |
| STARTdesign | Single to Double Arm Transition Design for Phase II Clinical Trials |
| starter | Starter Kit for New Projects |
| startR | Automatically Retrieve Multidimensional Distributed Data Sets |
| STARTS | Functions for the STARTS Model |
| startup | Friendly R Startup Configuration |
| startupmsg | Utilities for Start-Up Messages |
| starvars | Vector Logistic Smooth Transition Models Estimation and Prediction |
| starvz | R-Based Visualization Techniques for Task-Based Applications |
| starwarsdb | Relational Data from the 'Star Wars' API for Learning and Teaching |
| STAT | Interactive Document for Working with Basic Statistical Analysis |
| STAT2 | Interactive Document for Working with Basic Statistical Analysis |
| Stat2Data | Datasets for Stat2 |
| Statamarkdown | 'Stata' Markdown |
| statar | Tools Inspired by 'Stata' to Manipulate Tabular Data |
| statBasics | Basic Functions to Statistical Methods Course |
| statcanR | Client for Statistics Canada's Open Economic Data |
| statcheck | Extract Statistics from Articles and Recompute P-Values |
| statcodelists | Use Standardized Statistical Codelists |
| statcomp | Statistical Complexity and Information Measures for Time Series Analysis |
| statConfR | Models of Decision Confidence and Metacognition |
| StatDA | Statistical Analysis for Environmental Data |
| StatDataML | Read and Write StatDataML Files |
| statebins | Create United States Uniform Cartogram Heatmaps |
| StateLevelForest | Historical State-Level Forest Cover Data in the United States |
| states | Create Panels of Independent States |
| statespacer | State Space Modelling in 'R' |
| statforbiology | Tools for Data Analyses in Biology |
| statgenGWAS | Genome Wide Association Studies |
| statgenGxE | Genotype by Environment (GxE) Analysis |
| statgenHTP | High Throughput Phenotyping (HTP) Data Analysis |
| statgenIBD | Calculation of IBD Probabilities |
| statgenMPP | QTL Mapping for Multi Parent Populations |
| statgenQTLxT | Multi-Trait and Multi-Trial Genome Wide Association Studies |
| statgenSTA | Single Trial Analysis (STA) of Field Trials |
| statGraph | Statistical Methods for Graphs |
| staticryptR | Encrypt HTML Files Using 'staticrypt' |
| stationaRy | Detailed Meteorological Data from Stations All Over the World |
| statip | Statistical Functions for Probability Distributions and Regression |
| statisfactory | Statistical and Geometrical Tools |
| StatMatch | Statistical Matching or Data Fusion |
| statmod | Statistical Modeling |
| statnet | Software Tools for the Statistical Analysis of Network Data |
| statnet.common | Common R Scripts and Utilities Used by the Statnet Project Software |
| statnetWeb | A Shiny App for Network Modeling with 'statnet' |
| statnipokladna | Use Data from the Czech Public Finance Database |
| StatPerMeCo | Statistical Performance Measures to Evaluate Covariance Matrix Estimates |
| statprograms | Graduate Statistics Program Datasets |
| statpsych | Statistical Methods for Psychologists |
| statquotes | Quotes on Statistics, Data Visualization and Science |
| StatRank | Statistical Rank Aggregation: Inference, Evaluation, and Visualization |
| stats19 | Work with Open Road Traffic Casualty Data from Great Britain |
| stats4teaching | Simulate Pedagogical Statistical Data |
| statsearchanalyticsr | An Interface for the 'STAT Search Analytics' 'API' |
| statsExpressions | Tidy Dataframes and Expressions with Statistical Details |
| Statsomat | Shiny Apps for Automated Data Analysis and Automated Interpretation |
| statsr | Companion Software for the Coursera Statistics with R Specialization |
| statswalesr | Easily Extract Data from 'StatsWales' |
| statVisual | Statistical Visualization Tools |
| STB | Simultaneous Tolerance Bounds |
| stbl | Stabilize Function Arguments |
| stcos | Space-Time Change of Support |
| stcov | Stein's Covariance Estimator |
| stcpR6 | Sequential Test and Change-Point Detection Algorithms Based on E-Values / E-Detectors |
| stddiff | Calculate the Standardized Difference for Numeric, Binary and Category Variables |
| stdmod | Standardized Moderation Effect and Its Confidence Interval |
| stdReg | Regression Standardization |
| stdReg2 | Regression Standardization for Causal Inference |
| stdvectors | C++ Standard Library Vectors in R |
| steadyICA | ICA and Tests of Independence via Multivariate Distance Covariance |
| steepness | Testing Steepness of Dominance Hierarchies |
| SteinIV | Semi-Parametric Stein-Like Estimator with Instrumental Variables |
| stelfi | Hawkes and Log-Gaussian Cox Point Processes Using Template Model Builder |
| stellaR | Evolutionary Tracks and Isochrones from Pisa Stellar Evolution Database |
| StemAnalysis | Reconstructing Tree Growth and Carbon Accumulation with Stem Analysis Data |
| stemmatology | Stemmatological Analysis of Textual Traditions |
| StempCens | Spatio-Temporal Estimation and Prediction for Censored/Missing Responses |
| stencilaschema | Bindings for Stencila Schema |
| stenR | Standardization of Raw Discrete Questionnaire Scores |
| StepBeta | Stepwise Procedure for Beta, Beta-Binomial and Negative Binomial Regression Models |
| STEPCAM | ABC-SMC Inference of STEPCAM |
| stepcount | Estimate Step Counts from 'Accelerometry' Data |
| stepdownfdp | A Step-Down Procedure to Control the False Discovery Proportion |
| stepgbm | Stepwise Variable Selection for Generalized Boosted Regression Modeling |
| StepGWR | A Hybrid Spatial Model for Prediction and Capturing Spatial Variation in the Data |
| stepjglm | Variable Selection for Joint Modeling of Mean and Dispersion |
| stepmixr | Interface to 'Python' Package 'StepMix' |
| stepp | Subpopulation Treatment Effect Pattern Plot (STEPP) |
| SteppedPower | Power Calculation for Stepped Wedge Designs |
| stepPenal | Stepwise Forward Variable Selection in Penalized Regression |
| stepPlr | L2 Penalized Logistic Regression with Stepwise Variable Selection |
| stepR | Multiscale Change-Point Inference |
| StepReg | Stepwise Regression Analysis |
| steprf | Stepwise Predictive Variable Selection for Random Forest |
| steps | Spatially- and Temporally-Explicit Population Simulator |
| StepSignalMargiLike | Step-Wise Signal Extraction via Marginal Likelihood |
| stepSplitReg | Stepwise Split Regularized Regression |
| StepwiseTest | Multiple Testing Method to Control Generalized Family-Wise Error Rate and False Discovery Proportion |
| StereoMorph | Stereo Camera Calibration and Reconstruction |
| stevedata | Steve's Toy Data for Teaching About a Variety of Methodological, Social, and Political Topics |
| stevedore | Docker Client |
| stevemisc | Steve's Miscellaneous Functions |
| stevetemplates | Steve's R Markdown Templates |
| stevethemes | Steve's 'ggplot2' Themes and Related Theme Elements |
| stfit | Spatio-Temporal Functional Imputation Tool |
| STFTS | Statistical Tests for Functional Time Series |
| stgam | Spatially and Temporally Varying Coefficient Models Using Generalized Additive Models |
| STGS | Genomic Selection using Single Trait |
| sticky | Persist Attributes Across Data Operations |
| stickyr | Data Frames with Persistent Columns and Attributes |
| STICr | Process Stream Temperature, Intermittency, and Conductivity (STIC) Sensor Data |
| SticsRFiles | Read and Modify 'STICS' Input/Output Files |
| stilt | Separable Gaussian Process Interpolation (Emulation) |
| stim | Incorporating Stability Information into Cross-Sectional Estimates |
| stima | Simultaneous Threshold Interaction Modeling Algorithm |
| stinepack | Stineman, a Consistently Well Behaved Method of Interpolation |
| stlARIMA | STL Decomposition and ARIMA Hybrid Forecasting Model |
| stlELM | Hybrid Forecasting Model Based on STL Decomposition and ELM |
| stlnpp | Spatio-Temporal Analysis of Point Patterns on Linear Networks |
| stlplus | Enhanced Seasonal Decomposition of Time Series by Loess |
| stlTDNN | STL Decomposition and TDNN Hybrid Time Series Forecasting |
| stm | Estimation of the Structural Topic Model |
| stmCorrViz | A Tool for Structural Topic Model Visualizations |
| stmgp | Rapid and Accurate Genetic Prediction Modeling for Genome-Wide Association or Whole-Genome Sequencing Study Data |
| stmgui | Shiny Application for Creating STM Models |
| stminsights | A 'Shiny' Application for Inspecting Structural Topic Models |
| StMoMo | Stochastic Mortality Modelling |
| StMoSim | Quantile-Quantile Plot with Several Gaussian Simulations |
| STMotif | Discovery of Motifs in Spatial-Time Series |
| STMr | Strength Training Manual R-Language Functions |
| stocc | Fit a Spatial Occupancy Model via Gibbs Sampling |
| StochBlock | Stochastic Blockmodeling of One-Mode and Linked Networks |
| stochLAB | Stochastic Collision Risk Model |
| stochQN | Stochastic Limited Memory Quasi-Newton Optimizers |
| stochvol | Efficient Bayesian Inference for Stochastic Volatility (SV) Models |
| stockAnalyst | Equity Valuation using Methods of Fundamental Analysis |
| StockDistFit | Fit Stock Price Distributions |
| stockR | Identifying Stocks in Genetic Data |
| stocks | Stock Market Analysis |
| stodom | Estimating Consistent Tests for Stochastic Dominance |
| stoichcalc | R Functions for Solving Stoichiometric Equations |
| stokes | The Exterior Calculus |
| stopdetection | Stop Detection in Timestamped Trajectory Data using Spatiotemporal Clustering |
| STOPES | Selection Threshold Optimized Empirically via Splitting |
| stopp | Spatio-Temporal Point Pattern Methods, Model Fitting, Diagnostics, Simulation, Local Tests |
| stoppingrule | Create and Evaluate Stopping Rules for Safety Monitoring |
| stops | Structure Optimized Proximity Scaling |
| stopwords | Multilingual Stopword Lists |
| Storm | Write Storm Bolts in R using the Storm Multi-Language Protocol |
| StormR | Analyzing the Behaviour of Wind Generated by Tropical Storms and Cyclones |
| storr | Simple Key Value Stores |
| stortingscrape | Access Data from the Norwegian Parliament API |
| stoRy | Download, Explore, and Analyze Literary Theme Ontology Data |
| storywranglr | Explore Twitter Trends with the 'Storywrangler' API |
| stosim | Stochastic Simulator for Reliability Modeling of Repairable Systems |
| STPGA | Selection of Training Populations by Genetic Algorithm |
| stplanr | Sustainable Transport Planning |
| stpm | Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes |
| stpp | Space-Time Point Pattern Simulation, Visualisation and Analysis |
| stpphawkes | Missing Data for Marked Hawkes Process |
| stppSim | Spatiotemporal Point Patterns Simulation |
| stR | Seasonal Trend Decomposition Using Regression |
| str2str | Convert R Objects from One Structure to Another |
| StrainRanking | Ranking of Pathogen Strains |
| strand | A Framework for Investment Strategy Simulation |
| stranslate | Simple Translation Between Different Languages |
| strap | Stratigraphic Tree Analysis for Palaeontology |
| strat | An Implementation of the Stratification Index |
| strata.MaxCombo | Stratified Max-Combo Test |
| stratallo | Optimum Sample Allocation in Stratified Sampling |
| stratamatch | Stratification and Matching for Large Observational Data Sets |
| stratastats | Stratified Analysis of 2x2 Contingency Tables |
| stratbr | Optimal Stratification in Stratified Sampling |
| strategicplayers | Strategic Players |
| Strategy | Generic Framework to Analyze Trading Strategies |
| stratEst | Strategy Estimation |
| StrathE2E2 | End-to-End Marine Food Web Model |
| stratification | Univariate Stratification of Survey Populations |
| StratifiedBalancing | Stratified Covariate Balancing |
| StratifiedMedicine | Stratified Medicine |
| StratifiedRF | Builds Trees by Sampling Variables in Groups |
| stratifiedyh | Stratified Sampling and Labeling of Data in R |
| stratifyR | Optimal Stratification of Univariate Populations |
| StratigrapheR | Integrated Stratigraphy |
| StratPal | Stratigraphic Paleobiology Modeling Pipelines |
| StratSel | Strategic Selection Estimator |
| STraTUS | Enumeration and Uniform Sampling of Transmission Trees for a Known Phylogeny |
| stratvns | Optimal Stratification in Stratified Sampling |
| straweib | Stratified Weibull Regression Model |
| strawr | Fast Implementation of Reading/Dump for .hic Files |
| stray | Anomaly Detection in High Dimensional and Temporal Data |
| STREAK | Receptor Abundance Estimation using Feature Selection and Gene Set Scoring |
| stream | Infrastructure for Data Stream Mining |
| streambugs | Parametric Ordinary Differential Equations Model of Growth, Death, and Respiration of Macroinvertebrate and Algae Taxa |
| streamDAG | Analytical Methods for Stream DAGs |
| streamDepletr | Estimate Streamflow Depletion Due to Groundwater Pumping |
| StreamMetabolism | Calculate Single Station Metabolism from Diurnal Oxygen Curves |
| streamMOA | Interface for MOA Stream Clustering Algorithms |
| streamR | Access to Twitter Streaming API via R |
| streetscape | Collect And Investigate Street Views For Urban Science |
| StReg | Student's t Regression Models |
| stressaddition | Modelling Tri-Phasic Concentration-Response Relationships |
| stressor | Algorithms for Testing Models under Stress |
| stressr | Fetch and plot financial stress index and component data |
| StressStrength | Computation and Estimation of Reliability of Stress-Strength Models |
| strex | Extra String Manipulation Functions |
| strider | Strided Iterator and Range |
| String2AdjMatrix | Creates an Adjacency Matrix from a List of Strings |
| string2path | Rendering Font into 'data.frame' |
| stringdist | Approximate String Matching, Fuzzy Text Search, and String Distance Functions |
| stringfish | Alt String Implementation |
| stringformattr | Dynamic String Formatting |
| stringi | Fast and Portable Character String Processing Facilities |
| stringmagic | Character String Operations and Interpolation, Magic Edition |
| stringr | Simple, Consistent Wrappers for Common String Operations |
| stringstatic | Dependency-Free String Operations |
| stringx | Replacements for Base String Functions Powered by 'stringi' |
| strip | Lighten your R Model Outputs |
| stripless | Structured Trellis Displays Without Strips for Lattice Graphics |
| striprtf | Extract Text from RTF File |
| STRMPS | Analysis of Short Tandem Repeat (STR) Massively Parallel Sequencing (MPS) Data |
| stRoke | Clinical Stroke Research |
| StroupGLMM | R Codes and Datasets for Generalized Linear Mixed Models: Modern Concepts, Methods and Applications by Walter W. Stroup |
| strs | 'Python' Style String Functions |
| strucchange | Testing, Monitoring, and Dating Structural Changes |
| strucchangeRcpp | Testing, Monitoring, and Dating Structural Changes: C++ Version |
| structree | Tree-Structured Clustering |
| StructuralDecompose | Decomposes a Level Shifted Time Series |
| StructureMC | Structured Matrix Completion |
| strvalidator | Process Control and Validation of Forensic STR Kits |
| sts | Estimation of the Structural Topic and Sentiment-Discourse Model for Text Analysis |
| stuart | Subtests Using Algorithmic Rummaging Techniques |
| studentlife | Tidy Handling and Navigation of the Student-Life Dataset |
| studyStrap | Study Strap and Multi-Study Learning Algorithms |
| StuteTest | Stute (1997) Linearity Test |
| STV | Single Transferable Vote Counting |
| stxplore | Exploration of Spatio-Temporal Data |
| styler | Non-Invasive Pretty Printing of R Code |
| stylest2 | Estimating Speakers of Texts |
| stylo | Stylometric Multivariate Analyses |
| subcopem2D | Bivariate Empirical Subcopula |
| subdetect | Detect Subgroup with an Enhanced Treatment Effect |
| subformula | Create Subformulas of a Formula |
| subgroup | Methods for exploring treatment effect heterogeneity in subgroup analysis of clinical trials |
| SubgrpID | Patient Subgroup Identification for Clinical Drug Development |
| subgxe | Combine Multiple GWAS by Using Gene-Environment Interactions |
| submax | Effect Modification in Observational Studies Using the Submax Method |
| SubpathwayLNCE | Identify Signal Subpathways Competitively Regulated by LncRNAs Based on ceRNA Theory |
| subplex | Unconstrained Optimization using the Subplex Algorithm |
| subrank | Computes Copula using Ranks and Subsampling |
| subsampling | Optimal Subsampling Methods for Statistical Models |
| subscore | Computing Subscores in Classical Test Theory and Item Response Theory |
| subscreen | Systematic Screening of Study Data for Subgroup Effects |
| subsemble | An Ensemble Method for Combining Subset-Specific Algorithm Fits |
| subspace | Interface to OpenSubspace |
| SubTite | Subgroup Specific Optimal Dose Assignment |
| SubTS | Positive Tempered Stable Distributions and Related Subordinators |
| SubtypeDrug | Prioritization of Candidate Cancer Subtype Specific Drugs |
| SubVis | Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices |
| success | Survival Control Charts Estimation Software |
| sudachir | R Interface to 'Sudachi' |
| suddengains | Identify Sudden Gains in Longitudinal Data |
| sudoku | Sudoku Puzzle Generator and Solver |
| sudokuAlt | Tools for Making and Spoiling Sudoku Games |
| SudokuDesigns | Sudoku as an Experimental Design |
| SuessR | Suess and Laws Corrections for Marine Stable Carbon Isotope Data |
| sufficientForecasting | Sufficient Forecasting using Factor Models |
| sugarbag | Create Tessellated Hexagon Maps |
| sugarglider | Create Glyph-Maps of Spatiotemporal Data |
| suggests | Declare when Suggested Packages are Needed |
| sugrrants | Supporting Graphs for Analysing Time Series |
| SumcaVer1 | Mean Square Prediction Error Estimation in Small Area Estimation |
| sumFREGAT | Fast Region-Based Association Tests on Summary Statistics |
| summariser | Easy Calculation and Visualisation of Confidence Intervals |
| SummaryLasso | Building Polygenic Risk Score Using GWAS Summary Statistics |
| summarytools | Tools to Quickly and Neatly Summarize Data |
| summclust | Module to Compute Influence and Leverage Statistics for Regression Models with Clustered Errors |
| SUMMER | Small-Area-Estimation Unit/Area Models and Methods for Estimation in R |
| SUMO | Generating Multi-Omics Datasets |
| sumR | Approximate Summation of Series |
| sumSome | Permutation True Discovery Guarantee by Sum-Based Tests |
| sunburstR | Sunburst 'Htmlwidget' |
| suncalc | Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase |
| Sunclarco | Survival Analysis using Copulas |
| sundialr | An Interface to 'SUNDIALS' Ordinary Differential Equation (ODE) Solvers |
| SUNGEO | Sub-National Geospatial Data Archive: Geoprocessing Toolkit |
| SunsVoc | Constructing Suns-Voc from Outdoor Time-Series I-V Curves |
| suntools | Calculate Sun Position, Sunrise, Sunset, Solar Noon and Twilight |
| supclust | Supervised Clustering of Predictor Variables Such as Genes |
| superb | Summary Plots with Adjusted Error Bars |
| superbiclust | Generating Robust Biclusters from a Bicluster Set (Ensemble Biclustering) |
| SuperCell | Simplification of scRNA-Seq Data by Merging Together Similar Cells |
| supercells | Superpixels of Spatial Data |
| supercompress | Supervised Compression of Big Data |
| superdiag | A Comprehensive Test Suite for Testing Markov Chain Nonconvergence |
| SuperExactTest | Exact Test and Visualization of Multi-Set Intersections |
| SuperGauss | Superfast Likelihood Inference for Stationary Gaussian Time Series |
| superheat | A Graphical Tool for Exploring Complex Datasets Using Heatmaps |
| SuperLearner | Super Learner Prediction |
| superMICE | SuperLearner Method for MICE |
| superml | Build Machine Learning Models Like Using Python's Scikit-Learn Library in R |
| supernova | Judd, McClelland, & Ryan Formatting for ANOVA Output |
| superpc | Supervised Principal Components |
| SuperpixelImageSegmentation | Superpixel Image Segmentation |
| Superpower | Simulation-Based Power Analysis for Factorial Designs |
| SuperRanker | Sequential Rank Agreement |
| supervisedPRIM | Supervised Classification Learning and Prediction using Patient Rule Induction Method (PRIM) |
| SupMZ | Detecting Structural Change with Heteroskedasticity |
| suppdata | Downloading Supplementary Data from Published Manuscripts |
| SuppDists | Supplementary Distributions |
| support.BWS | Tools for Case 1 Best-Worst Scaling |
| support.BWS2 | Tools for Case 2 Best-Worst Scaling |
| support.BWS3 | Tools for Case 3 Best-Worst Scaling |
| support.CEs | Basic Functions for Supporting an Implementation of Choice Experiments |
| supportR | Support Functions for Wrangling and Visualization |
| sur | Companion to "Statistics Using R: An Integrative Approach" |
| surbayes | Bayesian Analysis of Seemingly Unrelated Regression Models |
| sure | Surrogate Residuals for Ordinal and General Regression Models |
| sureLDA | A Novel Multi-Disease Automated Phenotyping Method for the EHR |
| SuRF.vs | Subsampling Ranking Forward Selection (SuRF) |
| surface | Fitting Hansen Models to Investigate Convergent Evolution |
| SurfaceTortoise | Find Optimal Sampling Locations Based on Spatial Covariate(s) |
| SurfRough | Calculate Surface/Image Texture Indexes |
| surreal | Create Datasets with Hidden Images in Residual Plots |
| Surrogate | Evaluation of Surrogate Endpoints in Clinical Trials |
| SurrogateBMA | Flexible Evaluation of Surrogate Markers with Bayesian Model Averaging |
| SurrogateOutcome | Estimation of the Proportion of Treatment Effect Explained by Surrogate Outcome Information |
| SurrogateRank | Rank-Based Test to Evaluate a Surrogate Marker |
| SurrogateRegression | Surrogate Outcome Regression Analysis |
| SurrogateRsq | Goodness-of-Fit Analysis for Categorical Data using the Surrogate R-Squared |
| SurrogateTest | Early Testing for a Treatment Effect using Surrogate Marker Information |
| surrosurv | Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses |
| surrosurvROC | Surrogate Survival ROC |
| suRtex | LaTeX descriptive statistic reporting for survey data |
| surtvep | Cox Non-Proportional Hazards Model with Time-Varying Coefficients |
| surv2sampleComp | Inference for Model-Free Between-Group Parameters for Censored Survival Data |
| survAH | Survival Data Analysis using Average Hazard |
| survAUC | Estimators of Prediction Accuracy for Time-to-Event Data |
| survAWKMT2 | Two-Sample Tests Based on Differences of Kaplan-Meier Curves |
| survBootOutliers | Concordance Based Bootstrap Methods for Outlier Detection in Survival Analysis |
| survC1 | C-Statistics for Risk Prediction Models with Censored Survival Data |
| survcompare | Nested Cross-Validation to Compare Cox-PH, Cox-Lasso, Survival Random Forests |
| SurvCorr | Correlation of Bivariate Survival Times |
| survCurve | Plots Survival Curves Element by Element |
| SurvDisc | Discrete Time Survival and Longitudinal Data Analysis |
| surveil | Time Series Models for Disease Surveillance |
| surveillance | Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena |
| survELtest | Comparing Multiple Survival Functions with Crossing Hazards |
| SurvEval | Methods for the Evaluation of Survival Models |
| survex | Explainable Machine Learning in Survival Analysis |
| survexp.fr | Relative Survival, AER and SMR Based on French Death Rates |
| survey | Analysis of Complex Survey Samples |
| surveybootstrap | Bootstrap with Survey Data |
| SurveyCC | Canonical Correlation for Survey Data |
| surveyCV | Cross Validation Based on Survey Design |
| surveydata | Tools to Work with Survey Data |
| SurveyDefense | Survey Defense Tool |
| surveydown | Markdown-Based Surveys Using 'Quarto' and 'shiny' |
| surveyexplorer | Quickly Explore Complex Survey Data |
| surveygraph | Network Representations of Attitudes |
| surveyplanning | Survey Planning Tools |
| surveyPrev | Mapping the Prevalence of Binary Indicators using Survey Data in Small Areas |
| surveysd | Survey Standard Error Estimation for Cumulated Estimates and their Differences in Complex Panel Designs |
| surveytable | Formatted Survey Estimates |
| surveyvoi | Survey Value of Information |
| survHE | Survival Analysis in Health Economic Evaluation |
| SurvHiDim | High Dimensional Survival Data Analysis |
| survIDINRI | IDI and NRI for Comparing Competing Risk Prediction Models with Censored Survival Data |
| survidm | Inference and Prediction in an Illness-Death Model |
| SurviMChd | High Dimensional Survival Data Analysis with Markov Chain Monte Carlo |
| survival | Survival Analysis |
| survival.svb | Fit High-Dimensional Proportional Hazards Models |
| survivalAnalysis | High-Level Interface for Survival Analysis and Associated Plots |
| SurvivalClusteringTree | Clustering Analysis Using Survival Tree and Forest Algorithms |
| survivalmodels | Models for Survival Analysis |
| survivalMPL | Penalised Maximum Likelihood for Survival Analysis Models |
| survivalMPLdc | Penalised Likelihood for Survival Analysis with Dependent Censoring |
| survivalPLANN | Neural Networks to Predict Survival |
| survivalREC | Nonparametric Estimation of the Distribution of Gap Times for Recurrent Events |
| survivalROC | Time-Dependent ROC Curve Estimation from Censored Survival Data |
| survivalSL | Super Learner for Survival Prediction from Censored Data |
| survivalsvm | Survival Support Vector Analysis |
| SurvivalTests | Survival Tests for One-Way Layout |
| survivalVignettes | Survival Analysis Vignettes and Optional Datasets |
| survivoR | Data from all Seasons of Survivor (US) TV Series in Tidy Format |
| SurvLong | Analysis of Proportional Hazards Model with Sparse Longitudinal Covariates |
| SurvMA | Model Averaging Prediction of Personalized Survival Probabilities |
| SurvMetrics | Predictive Evaluation Metrics in Survival Analysis |
| SurvMI | Multiple Imputation Method in Survival Analysis |
| survminer | Drawing Survival Curves using 'ggplot2' |
| survMisc | Miscellaneous Functions for Survival Data |
| survmixer | Design of Clinical Trials with Survival Endpoints Based on Binary Responses |
| survML | Tools for Flexible Survival Analysis Using Machine Learning |
| survobj | Objects to Simulate Survival Times |
| survout | Excel Conversion of R Surival Analysis Output |
| survParamSim | Parametric Survival Simulation with Parameter Uncertainty |
| survPen | Multidimensional Penalized Splines for Survival and Net Survival Models |
| survPresmooth | Presmoothed Estimation in Survival Analysis |
| SurvRegCensCov | Weibull Regression for a Right-Censored Endpoint with Interval-Censored Covariate |
| survRM2 | Comparing Restricted Mean Survival Time |
| survRM2adapt | Flexible and Coherent Test/Estimation Procedure Based on Restricted Mean Survival Times |
| survRM2perm | Permutation Test for Comparing Restricted Mean Survival Time |
| survSAKK | Create Publication Ready Kaplan-Meier Plots |
| survSens | Sensitivity Analysis with Time-to-Event Outcomes |
| survsim | Simulation of Simple and Complex Survival Data |
| survSNP | Power Calculations for SNP Studies with Censored Outcomes |
| SurvSparse | Survival Analysis with Sparse Longitudinal Covariates |
| survSpearman | Nonparametric Spearman's Correlation for Survival Data |
| survstan | Fitting Survival Regression Models via 'Stan' |
| SurvTrunc | Analysis of Doubly Truncated Data |
| susieR | Sum of Single Effects Linear Regression |
| susographql | Comprehensive Interface to the Survey Solutions 'GraphQL' API |
| SUSY | Surrogate Synchrony |
| sValues | Measures of the Sturdiness of Regression Coefficients |
| svars | Data-Driven Identification of SVAR Models |
| svd | Interfaces to Various State-of-Art SVD and Eigensolvers |
| svDialogs | 'SciViews' - Standard Dialog Boxes for Windows, MacOS and Linuxes |
| svDialogstcltk | 'SciViews' - Standard Dialog Boxes using Tcl/Tk |
| SVDNF | Discrete Nonlinear Filtering for Stochastic Volatility Models |
| SVEMnet | Self-Validated Ensemble Models with Elastic Net Regression |
| svenssonm | Svensson's Method |
| svglite | An 'SVG' Graphics Device |
| svgPanZoom | R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic |
| svgtools | Manipulate SVG (Template) Files of Charts |
| svGUI | SciViews - Manage GUIs in R |
| svgViewR | 3D Animated Interactive Visualizations Using SVG and WebGL |
| svHttp | 'SciViews' - HTTP Server |
| svIDE | Functions to Ease Interactions Between R and IDE or Code Editors |
| svines | Stationary Vine Copula Models |
| svKomodo | 'SciViews' - Functions to Interface with Komodo IDE |
| SVMD | Spearman Variational Mode Decomposition |
| svMisc | Miscellaneous Functions for 'SciViews::R' |
| SVMMaj | Implementation of the SVM-Maj Algorithm |
| svmpath | The SVM Path Algorithm |
| SVN | Statistically Validated Networks |
| svplots | Sample Variance Plots (Sv-Plots) |
| svrep | Tools for Creating, Updating, and Analyzing Survey Replicate Weights |
| svrpath | The SVR Path Algorithm |
| svs | Tools for Semantic Vector Spaces |
| svSocket | 'SciViews' - Socket Server |
| svSweave | 'SciViews' - 'Sweave', 'Knitr' and R Markdown Companion Functions |
| svTools | Wrappers for Tools in Other Packages for IDE Friendliness |
| svUnit | 'SciViews' - Unit, Integration and System Testing |
| svWidgets | Management of GUI Widgets, Windows, and Other GUI Resources |
| svycdiff | Controlled Difference Estimation for Complex Surveys |
| svydiags | Regression Model Diagnostics for Survey Data |
| svylme | Linear Mixed Models for Complex Survey Data |
| SvyNom | Nomograms for Right-Censored Outcomes from Survey Designs |
| svyROC | Estimation of the ROC Curve and the AUC for Complex Survey Data |
| svyVarSel | Variable Selection for Complex Survey Data |
| svyVGAM | Design-Based Inference in Vector Generalised Linear Models |
| svyweight | Quick and Flexible Survey Weighting |
| swa | Subsampling Winner Algorithm for Classification |
| swag | Sparse Wrapper Algorithm |
| swagger | Dynamically Generates Documentation from a 'Swagger' Compliant API |
| swamp | Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations |
| swaprinc | Swap Principal Components into Regression Models |
| swaRm | Processing Collective Movement Data |
| swaRmverse | Swarm Space Creation |
| swatches | Read, Inspect, and Manipulate Color Swatch Files |
| swCRTdesign | Stepped Wedge Cluster Randomized Trial (SW CRT) Design |
| swdft | Sliding Window Discrete Fourier Transform (SWDFT) |
| swdpwr | Power Calculation for Stepped Wedge Cluster Randomized Trials |
| sweater | Speedy Word Embedding Association Test and Extras Using R |
| sweep | Tidy Tools for Forecasting |
| SweepDiscovery | Selective Sweep Discovery Tool |
| sweidnumbr | Handling of Swedish Identity Numbers |
| swephR | High Precision Swiss Ephemeris |
| swfscAirDAS | Southwest Fisheries Science Center Aerial DAS Data Processing |
| swfscDAS | Processing DAS Data Files |
| swfscMisc | Miscellaneous Functions for Southwest Fisheries Science Center |
| swgee | Simulation Extrapolation Inverse Probability Weighted Generalized Estimating Equations |
| SWIM | Scenario Weights for Importance Measurement |
| SwimmeR | Data Import, Cleaning, and Conversions for Swimming Results |
| swimplot | Tools for Creating Swimmers Plots using 'ggplot2' |
| swipeR | Carousels using the 'JavaScript' Library 'Swiper' |
| swirl | Learn R, in R |
| swirlify | A Toolbox for Writing 'swirl' Courses |
| SwissAir | Air Quality Data of Switzerland for One Year in 30 Min Resolution |
| swissparl | Interface to the Webservices of the Swiss Parliament |
| switchboard | An Agile Widget Engine for Real-Time, Dynamic Visualizations |
| switchcase | A Simple and Flexible Switch-Case Construct for the 'R' Language |
| switchr | Installing, Managing, and Switching Between Distinct Sets of Installed Packages |
| switchSelection | Endogenous Switching and Sample Selection Regression Models |
| SWMPr | Retrieving, Organizing, and Analyzing Estuary Monitoring Data |
| SWMPrExtension | Functions for Analyzing and Plotting Estuary Monitoring Data |
| SWTools | Helper Tools for Australian Hydrologists |
| sylcount | Syllable Counting and Readability Measurements |
| syllabifyr | Syllabifier for CMU Dictionary Transcriptions |
| syllogi | Collection of Data Sets for Teaching Purposes |
| sylly | Hyphenation and Syllable Counting for Text Analysis |
| sylly.en | Language Support for 'sylly' Package: English |
| sym.arma | Autoregressive and Moving Average Symmetric Models |
| symbol.equation.gpt | Simple User Interface to Build Equations and Add Symbols |
| symbolicDA | Analysis of Symbolic Data |
| SymbolicDeterminants | Symbolic Representation of Matrix Determinant |
| symbolicQspray | Multivariate Polynomials with Symbolic Parameters in their Coefficients |
| symDMatrix | Partitioned Symmetric Matrices |
| symengine | Interface to the 'SymEngine' Library |
| symmetry | Testing for Symmetry of Data and Model Residuals |
| symmoments | Symbolic Central and Noncentral Moments of the Multivariate Normal Distribution |
| symphony | Efficient and Precise Single-Cell Reference Atlas Mapping |
| symptomcheckR | Analyzing and Visualizing Symptom Checker Performance |
| symSEM | Symbolic Computation for Structural Equation Models |
| SymTS | Symmetric Tempered Stable Distributions |
| syn | Creates Synonyms From Target Words |
| synchronicity | Boost Mutex Functionality in R |
| synchrony | Methods for Computing Spatial, Temporal, and Spatiotemporal Statistics |
| SynchWave | Synchrosqueezed Wavelet Transform |
| SyncMove | Subsample Temporal Data to Synchronal Events and Compute the MCI |
| SyncRNG | A Synchronized Tausworthe RNG for R and Python |
| SYNCSA | Analysis of Functional and Phylogenetic Patterns in Metacommunities |
| SynDI | Synthetic Data Integration |
| synlik | Synthetic Likelihood Methods for Intractable Likelihoods |
| synMicrodata | Synthetic Microdata Generator |
| synr | Explore and Process Synesthesia Consistency Test Data |
| syntaxr | An 'SPSS' Syntax Generator for Multi-Variable Manipulation |
| syntenyPlotteR | Genome Synteny Visualization |
| Synth | Synthetic Control Group Method for Comparative Case Studies |
| synthACS | Synthetic Microdata and Spatial MicroSimulation Modeling for ACS Data |
| synthesis | Generate Synthetic Data from Statistical Models |
| synthesisr | Import, Assemble, and Deduplicate Bibliographic Datasets |
| synthesizer | Synthesize Data Based on Empirical Quantile Functions and Rank Order Matching |
| SynthETIC | Synthetic Experience Tracking Insurance Claims |
| synthpop | Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control |
| SynthTools | Tools and Tests for Experiments with Partially Synthetic Data Sets |
| syrup | Measure Memory and CPU Usage for Parallel R Code |
| sys | Powerful and Reliable Tools for Running System Commands in R |
| SyScSelection | Systematic Scenario Selection for Stress Testing |
| sysfonts | Loading Fonts into R |
| sysid | System Identification in R |
| syslognet | Send Log Messages to Remote 'syslog' Server |
| Sysrecon | Systematical Metabolic Reconstruction |
| systemfit | Estimating Systems of Simultaneous Equations |
| systemfonts | System Native Font Finding |
| SystemicR | Monitoring Systemic Risk |
| systemicrisk | Systemic Risk and Network Reconstruction |
| syt | Young Tableaux |
| syuzhet | Extracts Sentiment and Sentiment-Derived Plot Arcs from Text |
| T2DFitTailor | Tailor the Exercise Plans and Visualize the Outcome for T2D Patients |
| T2EQ | Functions for Applying the T^2-Test for Equivalence |
| T2Qv | Control Qualitative Variables |
| T4cluster | Tools for Cluster Analysis |
| T4transport | Tools for Computational Optimal Transport |
| tab | Create Summary Tables for Statistical Reports |
| Taba | Taba Robust Correlations |
| tabbycat | Tabulate and Summarise Categorical Data |
| taber | Split and Recombine Your Data |
| tabit | Simple Tabulation Made Simple |
| tablaxlsx | Write Formatted Tables in Excel Workbooks |
| table.express | Build 'data.table' Expressions with Data Manipulation Verbs |
| table1 | Tables of Descriptive Statistics in HTML |
| Table1Heatmap | Table 1 Heatmap |
| tablecompare | Compare Data Frames |
| tabledown | Create Publication Quality Tables and Plots |
| tableeasy | Tables of Clinical Study |
| TableHC | Higher Criticism Test of Two Frequency Counts Tables |
| tableHTML | A Tool to Create HTML Tables |
| tableMatrix | Combines 'data.table' and 'matrix' Classes |
| TableMonster | Table Monster |
| tableone | Create 'Table 1' to Describe Baseline Characteristics with or without Propensity Score Weights |
| tablerDash | 'Tabler' API for 'Shiny' |
| tables | Formula-Driven Table Generation |
| tableschema.r | Table Schema 'Frictionless Data' |
| tablesgg | Presentation-Quality Tables, Displayed Using 'ggplot2' |
| tablet | Tabulate Descriptive Statistics in Multiple Formats |
| TableToLongForm | Automatically Convert Hierarchical for-Human Tables to Machine-Readable LongForm Dataframes |
| tablexlsx | Export Data Frames to Excel Workbook |
| tabnet | Fit 'TabNet' Models for Classification and Regression |
| taboolaR | Get Data from 'Taboola' via the 'Windsor.ai' API |
| tabr | Music Notation Syntax, Manipulation, Analysis and Transcription in R |
| tabshiftr | Reshape Disorganised Messy Data |
| tabula | Analysis and Visualization of Archaeological Count Data |
| tabulapdf | Extract Tables from PDF Documents |
| tabularaster | Tidy Tools for 'Raster' Data |
| tabularmaps | Create Tile-Grid Geographical Maps |
| tabularMLC | Tabular Maximum Likelihood Classifier |
| tabulate | Pretty Console Output for Tables |
| tabulator | Efficient Tabulation with Stata-Like Output |
| tabulog | Parsing Semi-Structured Log Files into Tabular Format |
| tabuSearch | Tabu Search Algorithm for Binary Configurations |
| tabxplor | User-Friendly Tables with Color Helpers for Data Exploration |
| tacmagic | Positron Emission Tomography Time-Activity Curve Analysis |
| tactile | New and Extended Plots, Methods, and Panel Functions for 'lattice' |
| tada | Supporting Tools for Tada Science |
| TAF | Transparent Assessment Framework for Reproducible Research |
| TAG | Transformed Additive Gaussian Processes |
| tagcloud | Tag Clouds |
| tagr | Tagging and Organizing Objects in R |
| tagtools | Work with Data from High-Resolution Biologging Tags |
| TailClassifier | Tail Classifier |
| tailDepFun | Minimum Distance Estimation of Tail Dependence Models |
| tailloss | Estimate the Probability in the Upper Tail of the Aggregate Loss Distribution |
| TailRank | The Tail-Rank Statistic |
| tailTransform | Symmetric Transformation of Tails for Plotting Differences |
| taipan | Tool for Annotating Images in Preparation for Analysis |
| takos | Analysis of Differential Calorimetry Scans |
| talkr | Plotting Conversation Data |
| TAM | Test Analysis Modules |
| tame | Timing, Anatomical, Therapeutic and Chemical Based Medication Clustering |
| tanaka | Design Shaded Contour Lines (or Tanaka) Maps |
| TANDEM | A Two-Stage Approach to Maximize Interpretability of Drug Response Models Based on Multiple Molecular Data Types |
| TangledFeatures | Feature Selection in Highly Correlated Spaces |
| TangPoemR | Write Chinese Tang Poems |
| tangram | The Grammar of Tables |
| tangram.pipe | Row-by-Row Table Building |
| TapeR | Flexible Tree Taper Curves Based on Semiparametric Mixed Models |
| TapeS | Tree Taper Curves and Sorting Based on 'TapeR' |
| tapkee | Wrapper for 'tapkee' Dimension Reduction Library |
| tapLock | Seamless Single Sign-on for 'shiny' |
| tapnet | Trait Matching and Abundance for Predicting Bipartite Networks |
| TAQMNGR | Manage Tick-by-Tick Transaction Data |
| TAR | Bayesian Modeling of Autoregressive Threshold Time Series Models |
| tarchetypes | Archetypes for Targets |
| tardis | Text Analysis with Rules and Dictionaries for Inferring Sentiment |
| targeted | Targeted Inference |
| targets | Dynamic Function-Oriented 'Make'-Like Declarative Pipelines |
| Tariff | Replicate Tariff Method for Verbal Autopsy |
| TAShiny | 'Text Analyzer Shiny' |
| tashu | Analysis and Prediction of Bicycle Rental Amount |
| taskscheduleR | Schedule R Scripts and Processes with the Windows Task Scheduler |
| tastypie | Easy Pie Charts |
| tatest | Two-Group Ta-Test |
| tatoo | Combine and Export Data Frames |
| tau | Text Analysis Utilities |
| tauProcess | Tau Measure with Right-Censored Data |
| tauturri | Get Data Out of 'Tautulli' (Formerly 'PlexPy') |
| taxa | Classes for Storing and Manipulating Taxonomic Data |
| taxadb | A High-Performance Local Taxonomic Database Interface |
| taxalight | A Lightweight and Lightning-Fast Taxonomic Naming Interface |
| TaxaNorm | Feature-Wise Normalization for Microbiome Sequencing Data |
| TaxicabCA | Taxicab Correspondence Analysis |
| taxlist | Handling Taxonomic Lists |
| taxnames | Formatting Taxonomic Names in Markdown |
| taxonomizr | Functions to Work with NCBI Accessions and Taxonomy |
| taylor | Lyrics and Song Data for Taylor Swift's Discography |
| TaylorRussell | A Taylor-Russell Function for Multiple Predictors |
| tayloRswift | Color Palettes Generated by Taylor Swift Albums |
| tbd | Estimation of Causal Effects with Outcomes Truncated by Death |
| tbea | Pre- And Post-Processing in Bayesian Evolutionary Analyses |
| TBEST | Tree Branches Evaluated Statistically for Tightness |
| TBFmultinomial | TBF Methodology Extension for Multinomial Outcomes |
| tbl2xts | Convert Tibbles or Data Frames to Xts Easily |
| tbm | Transformation Boosting Machines |
| tboot | Tilted Bootstrap |
| TBox | Useful Functions for Programming and Generating Documents |
| TBRDist | Rearrangement Distances Between Unrooted Phylogenetic Trees |
| tbrf | Time-Based Rolling Functions |
| TCA | Tensor Composition Analysis |
| tcftt | Two-Sample Tests for Skewed Data |
| TCGAretriever | Retrieve Genomic and Clinical Data from CBioPortal Including TCGA Data |
| tcgaViz | Visualization Tool for the Cancer Genome Atlas Program (TCGA) |
| TcGSA | Time-Course Gene Set Analysis |
| TCHazaRds | Tropical Cyclone (Hurricane, Typhoon) Spatial Hazard Modelling |
| tci | Target Controlled Infusion (TCI) |
| TCIApathfinder | Client for the Cancer Imaging Archive REST API |
| TCIU | Spacekime Analytics, Time Complexity and Inferential Uncertainty |
| tcl | Testing in Conditional Likelihood Context |
| tcltk2 | Tcl/Tk Additions |
| tclust | Robust Trimmed Clustering |
| Tcomp | Data from the 2010 Tourism Forecasting Competition |
| tcpl | ToxCast Data Analysis Pipeline |
| tcplfit2 | A Concentration-Response Modeling Utility |
| TCPMOR | Two Cut-Points with Maximum Odds Ratio |
| td | Access to the 'twelvedata' Financial Data API |
| TDA | Statistical Tools for Topological Data Analysis |
| TDAkit | Toolkit for Topological Data Analysis |
| TDApplied | Machine Learning and Inference for Topological Data Analysis |
| TDAstats | Pipeline for Topological Data Analysis |
| tdata | Prepare Your Time-Series Data for Further Analysis |
| tdaunif | Uniform Manifold Samplers for Topological Data Analysis |
| TDAvec | Vector Summaries of Persistence Diagrams |
| TDbook | Companion Package for the Book "Data Integration, Manipulation and Visualization of Phylogenetic Trees" by Guangchuang Yu (2022, ISBN:9781032233574) |
| TDCM | The Transition Diagnostic Classification Model Framework |
| tdcmStan | Automating the Creation of Stan Code for TDCMs |
| TDCor | Gene Network Inference from Time-Series Transcriptomic Data |
| tdigest | Wicked Fast, Accurate Quantiles Using t-Digests |
| TDLM | Systematic Comparison of Trip Distribution Laws and Models |
| TDPanalysis | Granier's Sap Flow Sensors (TDP) Analysis |
| tdr | Target Diagram |
| tdROC | Nonparametric Estimation of Time-Dependent ROC, Brier Score, and Survival Difference from Right Censored Time-to-Event Data with or without Competing Risks |
| tdsa | Time-Dependent Sensitivity Analysis |
| tdsc | Time Domain Signal Coding |
| TDSTNN | Time Delay Spatio Temporal Neural Network |
| tdthap | TDT Tests for Extended Haplotypes |
| TE | Insertion/Deletion Dynamics for Transposable Elements |
| tea | Threshold Estimation Approaches |
| TeachHist | A Collection of Amended Histograms Designed for Teaching Statistics |
| TeachingDemos | Demonstrations for Teaching and Learning |
| TeachingSampling | Selection of Samples and Parameter Estimation in Finite Population |
| TeachNet | Fits Neural Networks to Learn About Backpropagation |
| teal | Exploratory Web Apps for Analyzing Clinical Trials Data |
| teal.code | Code Storage and Execution Class for 'teal' Applications |
| teal.data | Data Model for 'teal' Applications |
| teal.logger | Logging Setup for the 'teal' Family of Packages |
| teal.modules.clinical | 'teal' Modules for Standard Clinical Outputs |
| teal.modules.general | General Modules for 'teal' Applications |
| teal.reporter | Reporting Tools for 'shiny' Modules |
| teal.slice | Filter Module for 'teal' Applications |
| teal.transform | Functions for Extracting and Merging Data in the 'teal' Framework |
| teal.widgets | 'shiny' Widgets for 'teal' Applications |
| tealeaves | Solve for Leaf Temperature Using Energy Balance |
| TEAM | Multiple Hypothesis Testing on an Aggregation Tree Method |
| teamcolors | Color Palettes for Pro Sports Teams |
| teamr | Send Formatted Messages, Images and Objects to Microsoft 'Teams' |
| tectonicr | Analyzing the Orientation of Maximum Horizontal Stress |
| teda | An Implementation of the Typicality and Eccentricity Data Analysis Framework |
| tehtuner | Fit and Tune Models to Detect Treatment Effect Heterogeneity |
| teigen | Model-Based Clustering and Classification with the Multivariate t Distribution |
| Tejapi | API Wrapper for Taiwan Economic Journal Data Service |
| telefit | Estimation and Prediction for Remote Effects Spatial Process Models |
| telegram | R Wrapper Around the Telegram Bot API |
| telegram.bot | Develop a 'Telegram Bot' with R |
| telemetR | Filter and Analyze Generalised Telemetry Data from Organisms |
| telescope | Bayesian Mixtures with an Unknown Number of Components |
| TELP | Social Representation Theory Application: The Free Evocation of Words Technique |
| telraamStats | Retrieval and Visualization of Mobility Data from 'Telraam' Sensors |
| TempCont | Temporal Contributions on Trends using Mixed Models |
| tempdisagg | Methods for Temporal Disaggregation and Interpolation of Time Series |
| temperatureresponse | Temperature Response |
| templateICAr | Estimate Brain Networks and Connectivity with ICA and Empirical Priors |
| templates | A System for Working with Templates |
| templr | MASCOTNUM Algorithms Template Tools |
| Temporal | Parametric Time to Event Analysis |
| TemporalGSSA | Outputs Temporal Profile of Molecules from Stochastic Simulation Algorithm Generated Datasets |
| tempR | Temporal Sensory Data Analysis |
| TempStable | A Collection of Methods to Estimate Parameters of Different Tempered Stable Distributions |
| tempted | Temporal Tensor Decomposition, a Dimensionality Reduction Tool for Longitudinal Multivariate Data |
| Tendril | Compute and Display Tendril Plots |
| tenispolaR | Provides ZENIT-POLAR Substitution Cipher Method of Encryption |
| tenm | Temporal Ecological Niche Models |
| tensor | Tensor product of arrays |
| tensorA | Advanced Tensor Arithmetic with Named Indices |
| tensorBF | Bayesian Tensor Factorization |
| tensorBSS | Blind Source Separation Methods for Tensor-Valued Observations |
| TensorClustering | Model-Based Tensor Clustering |
| TensorComplete | Tensor Noise Reduction and Completion Methods |
| tensorEVD | A Fast Algorithm to Factorize High-Dimensional Tensor Product Matrices |
| tensorflow | R Interface to 'TensorFlow' |
| tensorMiss | Handle Missing Tensor Data with C++ Integration |
| TensorPreAve | Rank and Factor Loadings Estimation in Time Series Tensor Factor Models |
| tensorregress | Supervised Tensor Decomposition with Side Information |
| tensorsparse | Multiway Clustering via Tensor Block Models |
| TensorTest2D | Fitting Second-Order Tensor Data |
| TensorTools | Multilinear Algebra |
| tensorTS | Factor and Autoregressive Models for Tensor Time Series |
| tensr | Covariance Inference and Decompositions for Tensor Datasets |
| TEQR | Target Equivalence Range Design |
| tergm | Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models |
| tergmLite | Fast Simulation of Simple Temporal Exponential Random Graph Models |
| term | Create, Manipulate and Query Parameter Terms |
| terminaldigits | Tests of Uniformity and Independence for Terminal Digits |
| tern | Create Common TLGs Used in Clinical Trials |
| tern.gee | Tables and Graphs for Generalized Estimating Equations (GEE) Model Fits |
| tern.mmrm | Tables and Graphs for Mixed Models for Repeated Measures (MMRM) |
| Ternary | Create Ternary and Holdridge Plots |
| ternvis | Visualisation, Verification and Calibration of Ternary Probabilistic Forecasts |
| terra | Spatial Data Analysis |
| terrainmeshr | Triangulate and Simplify 3D Terrain Meshes |
| terrainr | Landscape Visualizations in R and 'Unity' |
| TesiproV | Calculation of Reliability and Failure Probability in Civil Engineering |
| TESS | Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events |
| tessellation | Delaunay and Voronoï Tessellations |
| tesselle | Easily Install and Load 'tesselle' Packages |
| tesseract | Open Source OCR Engine |
| test2norm | Normative Standards for Cognitive Tests |
| TestAnaAPP | A 'shiny' App for Test Analysis and Visualization |
| testarguments | Test (Multiple) Arguments of a User-Defined Prediction Algorithm |
| testassay | A Hypothesis Testing Framework for Validating an Assay for Precision |
| testCompareR | Comparing Two Diagnostic Tests with Dichotomous Results using Paired Data |
| TestCor | FWER and FDR Controlling Procedures for Multiple Correlation Tests |
| testcorr | Testing Zero Correlation |
| testdat | Data Unit Testing for R |
| TestDataImputation | Missing Item Responses Imputation for Test and Assessment Data |
| TestDesign | Optimal Test Design Approach to Fixed and Adaptive Test Construction |
| TestDimorph | Analysis of the Interpopulation Difference in Degree of Sexual Dimorphism Using Summary Statistics |
| testDriveR | Teaching Data for Statistics and Data Science |
| testequavar | Bootstrap Tests for Equality of 2, 3, or 4 Population Variances |
| tester | Tests and Checks Characteristics of R Objects |
| testex | Add Tests to Examples |
| testforDEP | Dependence Tests for Two Variables |
| TestFunctions | Test Functions for Simulation Experiments and Evaluating Optimization and Emulation Algorithms |
| TestGardener | Information Analysis for Test and Rating Scale Data |
| TestGenerator | Integration Unit Tests for Pharmacoepidemiological Studies |
| TestIndVars | Testing the Independence of Variables for Specific Covariance Structures |
| TestingSimilarity | Bootstrap Test for the Similarity of Dose Response Curves Concerning the Maximum Absolute Deviation |
| testit | A Simple Package for Testing R Packages |
| TestScorer | GUI for Entering Test Items and Obtaining Raw and Transformed Scores |
| TestsSymmetry | Tests for Symmetry when the Center of Symmetry is Unknown |
| testthat | Unit Testing for R |
| testthatmulti | Testing for R Packages with Multiple Attempts for Noisy Tests |
| testthis | Utils and 'RStudio' Addins to Make Testing Even More Fun |
| testtwice | Testing One Hypothesis Twice in Observational Studies |
| tetraclasse | Satisfaction Analysis using Tetraclasse Model and Llosa Matrix |
| tetragon | Automatic Sequence Prediction by Expansion of the Distance Matrix |
| tetrascatt | Acoustic Scattering for Complex Shapes by Using the DWBA |
| tetRys | Game of 'tetRys' |
| Tex4exams | Generating 'Sweave' Code for 'R/exams' Questions in Mathematics |
| TeXCheckR | Parses LaTeX Documents for Errors |
| TexExamRandomizer | Personalizes and Randomizes Exams Written in 'LaTeX' |
| texmex | Statistical Modelling of Extreme Values |
| texor | Converting 'LaTeX' 'R Journal' Articles into 'RJ-web-articles' |
| TExPosition | Two-Table ExPosition |
| texPreview | Compile and Preview Snippets of 'LaTeX' |
| texreg | Conversion of R Regression Output to LaTeX or HTML Tables |
| text | Analyses of Text using Transformers Models from HuggingFace, Natural Language Processing and Machine Learning |
| text.alignment | Text Alignment with Smith-Waterman |
| text2map | R Tools for Text Matrices, Embeddings, and Networks |
| text2sdg | Detecting UN Sustainable Development Goals in Text |
| text2sdgData | Contains the Trained 'text2sdg' Ensemble Model Data |
| text2speech | Text to Speech Conversion |
| text2vec | Modern Text Mining Framework for R |
| textab | Create Highly-Customized 'LaTeX' Tables |
| textAnnotatoR | Interactive Text Annotation Tool with 'shiny' GUI |
| textBoxPlacement | Compute a Non-Overlapping Layout of Text Boxes to Label Multiple Overlain Plots |
| textcat | N-Gram Based Text Categorization |
| textclean | Text Cleaning Tools |
| textdata | Download and Load Various Text Datasets |
| texteffect | Discovering Latent Treatments in Text Corpora and Estimating Their Causal Effects |
| texter | An Easy Text and Sentiment Analysis Library |
| TextForecast | Regression Analysis and Forecasting Using Textual Data from a Time-Varying Dictionary |
| textgRid | Praat TextGrid Objects in R |
| textile | Textile Images |
| textir | Inverse Regression for Text Analysis |
| textmineR | Functions for Text Mining and Topic Modeling |
| TextMiningGUI | Text Mining GUI Interface |
| textometry | Textual Data Analysis Package Used by the TXM Software |
| textplot | Text Plots |
| textpress | A Lightweight and Versatile NLP Toolkit |
| textrank | Summarize Text by Ranking Sentences and Finding Keywords |
| textrar | Interface to 'TexTra' from R |
| textrecipes | Extra 'Recipes' for Text Processing |
| textreg | n-Gram Text Regression, aka Concise Comparative Summarization |
| textreuse | Detect Text Reuse and Document Similarity |
| textshape | Tools for Reshaping Text |
| textshaping | Bindings to the 'HarfBuzz' and 'Fribidi' Libraries for Text Shaping |
| textstem | Tools for Stemming and Lemmatizing Text |
| textTinyR | Text Processing for Small or Big Data Files |
| textTools | Functions for Text Cleansing and Text Analysis |
| textutils | Utilities for Handling Strings and Text |
| tf | S3 Classes and Methods for Tidy Functional Data |
| TFactSR | Enrichment Approach to Predict Which Transcription Factors are Regulated |
| tfaddons | Interface to 'TensorFlow SIG Addons' |
| tfarima | Transfer Function and ARIMA Models |
| tfautograph | Autograph R for 'Tensorflow' |
| tfCox | Fits Piecewise Polynomial with Data-Adaptive Knots in Cox Model |
| tfdatasets | Interface to 'TensorFlow' Datasets |
| tfdeploy | Deploy 'TensorFlow' Models |
| tfer | Forensic Glass Transfer Probabilities |
| tfestimators | Interface to 'TensorFlow' Estimators |
| tfevents | Write Events for 'TensorBoard' |
| tfhub | Interface to 'TensorFlow' Hub |
| tfio | Interface to 'TensorFlow IO' |
| TFisher | Optimal Thresholding Fisher's P-Value Combination Method |
| TFM | Sparse Online Principal Component for TFM |
| TFMPvalue | Efficient and Accurate P-Value Computation for Position Weight Matrices |
| tfNeuralODE | Create Neural Ordinary Differential Equations with 'tensorflow' |
| tfplot | Time Frame User Utilities |
| tfprobability | Interface to 'TensorFlow Probability' |
| tframe | Time Frame Coding Kernel |
| tframePlus | Time Frame Coding Kernel Extensions |
| TFRE | A Tuning-Free Robust and Efficient Approach to High-Dimensional Regression |
| tfrmt | Applies Display Metadata to Analysis Results Datasets |
| tfrmtbuilder | 'shiny' App Companion to the 'tfrmt' Package |
| tfruns | Training Run Tools for 'TensorFlow' |
| TFunHDDC | Clustering of Functional Data via Mixtures of t-Distributions |
| tgamtheme | Globe and Mail Graphics Theme for 'ggplot2' |
| tgcd | Thermoluminescence Glow Curve Deconvolution |
| tggd | The Standard Distribution Functions for the Truncated Generalised Gamma Distribution |
| tglkmeans | Efficient Implementation of K-Means++ Algorithm |
| tgp | Bayesian Treed Gaussian Process Models |
| tgram | Compute and Plot Tracheidograms |
| TGS | Rapid Reconstruction of Time-Varying Gene Regulatory Networks |
| TGST | Targeted Gold Standard Testing |
| tgstat | Amos Tanay's Group High Performance Statistical Utilities |
| tgver | Turing Geovisualization Engine R package |
| TH.data | TH's Data Archive |
| thaipdf | R Markdown to PDF in Thai Language |
| thames | Truncated Harmonic Mean Estimator of the Marginal Likelihood |
| thankr | Find Out Who Maintains the Packages you Use |
| ThankYouStars | Give your Dependencies Stars on GitHub! |
| theft | Tools for Handling Extraction of Features from Time Series |
| theftdlc | Analyse and Interpret Time Series Features |
| theiaR | Download and Manage Data from Theia |
| thematic | Unified and Automatic 'Theming' of 'ggplot2', 'lattice', and 'base' R Graphics |
| themis | Extra Recipes Steps for Dealing with Unbalanced Data |
| TheOpenAIR | Integrate 'OpenAI' Large Language Models into Your 'R' Workflows |
| ThermalSampleR | Calculate Sample Sizes Required for Critical Thermal Limits Experiments |
| Thermimage | Thermal Image Analysis |
| ThermIndex | Calculate Thermal Indexes |
| thermocouple | Temperature Measurement with Thermocouples, RTD and IC Sensors |
| TheSFACE | The Subtype Free Average Causal Effect |
| thestats | R Package for Exploring Turkish Higher Education Statistics |
| thgenetics | Genetic Rare Variants Tests |
| thief | Temporal Hierarchical Forecasting |
| thinkr | Tools for Cleaning Up Messy Files |
| this.path | Get Executing Script's Path |
| ThomasJeffersonUniv | Handy Tools for TJU/TJUH Employees |
| thor | Interface to 'LMDB' |
| thorn | 'HTMLwidgets' Displaying Some 'WebGL' Shaders |
| THREC | Tree Height Response Calibration for Swedish Forests |
| thredds | Crawler for Navigating THREDDS Catalogs |
| threeBrain | Your Advanced 3D Brain Visualization |
| ThreeGroups | ML Estimator for Baseline-Placebo-Treatment (Three-Group) Experiments |
| threejs | Interactive 3D Scatter Plots, Networks and Globes |
| threesixtygiving | Download Charitable Grants from the '360Giving' Platform |
| ThreeWay | Three-Way Component Analysis |
| ThreeWiseMonkeys | The Japanese Pictorial Maxim "See No Evil, Hear No Evil, Speak No Evil" |
| threewords | Represent Precise Coordinates in Three Words |
| threg | Threshold Regression |
| thregI | Threshold Regression for Interval-Censored Data with a Cure Rate Option |
| Thresher | Threshing and Reaping for Principal Components |
| ThresholdROC | Optimum Threshold Estimation |
| ThresholdROCsurvival | Diagnostic Ability Assessment with Right-Censored Data at a Fixed Time t |
| threshr | Threshold Selection and Uncertainty for Extreme Value Analysis |
| thriftr | Apache Thrift Client Server |
| thunder | Computation and Visualisation of Atmospheric Convective Parameters |
| ThurMod | Thurstonian CFA and Thurstonian IRT Modeling |
| thurstonianIRT | Thurstonian IRT Models |
| tibble | Simple Data Frames |
| tibbletime | Time Aware Tibbles |
| tibblify | Rectangle Nested Lists |
| tican | Plot and Analyse Time-Intensity Data |
| tictactoe | Tic-Tac-Toe Game |
| tictoc | Functions for Timing R Scripts, as Well as Implementations of "Stack" and "StackList" Structures |
| TideCurves | Analysis and Prediction of Tides |
| TideHarmonics | Harmonic Analysis of Tides |
| Tides | Quasi-Periodic Time Series Characteristics |
| TideTables | Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides |
| tidier | Enhanced 'mutate' |
| tidyAML | Automatic Machine Learning with 'tidymodels' |
| tidybayes | Tidy Data and 'Geoms' for Bayesian Models |
| tidyBdE | Download Data from Bank of Spain |
| tidybins | Make Tidy Bins |
| tidyboot | Tidyverse-Compatible Bootstrapping |
| tidycat | Expand Tidy Output for Categorical Parameter Estimates |
| tidyCDISC | Quick Table Generation & Exploratory Analyses on ADaM-Ish Datasets |
| tidycensus | Load US Census Boundary and Attribute Data as 'tidyverse' and 'sf'-Ready Data Frames |
| tidychangepoint | A Tidy Framework for Changepoint Detection Analysis |
| tidycharts | Generate Tidy Charts Inspired by 'IBCS' |
| tidyclust | A Common API to Clustering |
| tidycmprsk | Competing Risks Estimation |
| tidycode | Analyze Lines of R Code the Tidy Way |
| tidycomm | Data Modification and Analysis for Communication Research |
| TidyConsultant | Tidy Consultant Universe |
| tidycountries | Access and Manipulate Comprehensive Country Level Data in Tidy Format |
| tidyCpp | Tidy C++ Header-Only Definitions for Parts of the C API of R |
| tidycwl | Tidy Common Workflow Language Tools and Workflows |
| tidydann | Add the 'dann' Model and the 'sub_dann' Model to the Tidymodels Ecosystem |
| tidydatatutor | Send Your R Code to 'Tidy Data Tutor' |
| tidydelta | Estimation of Standard Errors using Delta Method |
| tidyDenovix | Cleans Spectrophotometry Data Obtained from the Denovix DS-11 Instrument |
| TidyDensity | Functions for Tidy Analysis and Generation of Random Data |
| tidydice | Simulates Dice Rolls and Coin Flips |
| tidydr | Unify Dimensionality Reduction Results |
| tidyedgar | Tidy Fundamental Financial Data from 'SEC's 'EDGAR' 'API' |
| tidyEdSurvey | Integration of 'dplyr' and 'ggplot2' with 'EdSurvey' |
| tidyEmoji | Discovers Emoji from Text |
| tidyestimate | A Tidy Implementation of 'ESTIMATE' |
| tidyfast | Fast Tidying of Data |
| tidyfinance | Tidy Finance Helper Functions |
| tidyfit | Regularized Linear Modeling with Tidy Data |
| tidyformula | Build Formulas Using Tidy Selection Helpers |
| tidyfst | Tidy Verbs for Fast Data Manipulation |
| tidyft | Fast and Memory Efficient Data Operations in Tidy Syntax |
| tidygam | Tidy Prediction and Plotting of Generalised Additive Models |
| tidygapminder | Easily Tidy Gapminder Datasets |
| tidygate | Interactively Gate Points |
| tidygenomics | Tidy Verbs for Dealing with Genomic Data Frames |
| tidygeocoder | Geocoding Made Easy |
| tidygeoRSS | Tidy GeoRSS |
| tidygraph | A Tidy API for Graph Manipulation |
| tidyHeatmap | A Tidy Implementation of Heatmap |
| tidyheatmaps | Heatmaps from Tidy Data |
| tidyhte | Tidy Estimation of Heterogeneous Treatment Effects |
| tidyhydat | Extract and Tidy Canadian 'Hydrometric' Data |
| tidyindex | A Tidy Data Pipeline to Construct, Compare, and Analyse Indexes |
| tidyjson | Tidy Complex 'JSON' |
| tidylda | Latent Dirichlet Allocation Using 'tidyverse' Conventions |
| tidyllm | Tidy Integration of Large Language Models |
| tidylo | Weighted Tidy Log Odds Ratio |
| tidylog | Logging for 'dplyr' and 'tidyr' Functions |
| tidyLPA | Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source or Commercial Software |
| tidyMC | Monte Carlo Simulations Made Easy and Tidy |
| tidymodels | Easily Install and Load the 'Tidymodels' Packages |
| tidymodlr | An R6 Class to Perform Analysis on Long Tidy Data |
| TidyMultiqc | Converts 'MultiQC' Reports into Tidy Data Frames |
| tidymv | Tidy Model Visualisation for Generalised Additive Models |
| tidync | A Tidy Approach to 'NetCDF' Data Exploration and Extraction |
| tidypaleo | Tidy Tools for Paleoenvironmental Archives |
| tidyplate | Transform Microplate Data into Tibbles |
| tidyplots | Tidy Plots for Scientific Papers |
| tidyplus | Additional 'tidyverse' Functions |
| tidypmc | Parse Full Text XML Documents from PubMed Central |
| tidyposterior | Bayesian Analysis to Compare Models using Resampling Statistics |
| tidypredict | Run Predictions Inside the Database |
| tidyquant | Tidy Quantitative Financial Analysis |
| tidyquery | Query 'R' Data Frames with 'SQL' |
| tidyr | Tidy Messy Data |
| tidyrates | Tidy Epidemiological Rates |
| tidyREDCap | Helper Functions for Working with 'REDCap' Data |
| tidyrgee | 'tidyverse' Methods for 'Earth Engine' |
| tidyRSS | Tidy RSS for R |
| tidyrules | Utilities to Retrieve Rulelists from Model Fits, Filter, Prune, Reorder and Predict on Unseen Data |
| tidysdm | Species Distribution Models with Tidymodels |
| tidyselect | Select from a Set of Strings |
| tidySEM | Tidy Structural Equation Modeling |
| tidyseurat | Brings Seurat to the Tidyverse |
| tidysmd | Tidy Standardized Mean Differences |
| tidysq | Tidy Processing and Analysis of Biological Sequences |
| tidystats | Save Output of Statistical Tests |
| tidystopwords | Customisable Stop-Words in 110 Languages |
| tidystringdist | String Distance Calculation with Tidy Data Principles |
| tidysynth | A Tidy Implementation of the Synthetic Control Method |
| tidytable | Tidy Interface to 'data.table' |
| tidyterra | 'tidyverse' Methods and 'ggplot2' Helpers for 'terra' Objects |
| tidytext | Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools |
| tidytidbits | A Collection of Tools and Helpers Extending the Tidyverse |
| tidytlg | Create TLGs using the 'tidyverse' |
| tidytransit | Read, Validate, Analyze, and Map GTFS Feeds |
| tidytreatment | Tidy Methods for Bayesian Treatment Effect Models |
| tidytree | A Tidy Tool for Phylogenetic Tree Data Manipulation |
| tidytuesdayR | Access the Weekly 'TidyTuesday' Project Dataset |
| tidyUSDA | A Minimal Tool Set for Gathering USDA Quick Stat Data for Analysis and Visualization |
| tidyverse | Easily Install and Load the 'Tidyverse' |
| tidyvpc | VPC Percentiles and Prediction Intervals |
| tidywater | Water Quality Models for Drinking Water Treatment Processes |
| tidywikidatar | Explore 'Wikidata' Through Tidy Data Frames |
| tidyxl | Read Untidy Excel Files |
| tiff | Read and Write TIFF Images |
| tigerhitteR | Pre-Process of Time Series Data Set in R |
| TIGERr | Technical Variation Elimination with Ensemble Learning Architecture |
| tigers | Integration of Geography, Environment, and Remote Sensing |
| tigerstats | R Functions for Elementary Statistics |
| tigger | Infers Novel Immunoglobulin Alleles from Sequencing Data |
| tightClust | Tight Clustering |
| tightenBlock | Tightens an Observational Block Design by Balanced Subset Matching |
| tigreBrowserWriter | 'tigreBrowser' Database Writer |
| tigris | Load Census TIGER/Line Shapefiles |
| tiktokadsR | Access to TikTok Ads via the 'Windsor.ai' API |
| tikzDevice | R Graphics Output in LaTeX Format |
| tiledb | Modern Database Engine for Complex Data Based on Multi-Dimensional Arrays |
| tilegramsR | R Spatial Data for Tilegrams |
| tilemaps | Generate Tile Maps |
| tiler | Create Geographic and Non-Geographic Map Tiles |
| tilting | Variable Selection via Tilted Correlation Screening Algorithm |
| timbeR | Calculate Wood Volumes from Taper Functions |
| timbr | Forest/Tree Data Frames |
| time.slots | Display Data in a Weekly Calendar View |
| timechange | Efficient Manipulation of Date-Times |
| timeDate | Rmetrics - Chronological and Calendar Objects |
| timedelay | Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars |
| timedeppar | Infer Constant and Stochastic, Time-Dependent Model Parameters |
| timeDF | Subset and Flag Data Frames with Times by the Use of Periods |
| timeEL | Time to Event Analysis via Empirical Likelihood Inference |
| timeLineGraphics | HTML with Horizontal Strips Symbolizing Events in a Person's Life |
| timelineS | Timeline and Time Duration-Related Tools |
| timeordered | Time-Ordered and Time-Aggregated Network Analyses |
| timeperiodsR | Simple Definition Of Time Intervals |
| timeplyr | Fast Tidy Tools for Date and Date-Time Manipulation |
| timeR | Time Your Codes |
| timereg | Flexible Regression Models for Survival Data |
| timeROC | Time-Dependent ROC Curve and AUC for Censored Survival Data |
| timeSeries | Financial Time Series Objects (Rmetrics) |
| timeSeriesDataSets | Time Series Data Sets |
| timeseriesdb | A Time Series Database for Official Statistics with R and PostgreSQL |
| timetk | A Tool Kit for Working with Time Series |
| timetools | Seasonal/Sequential (Instants/Durations, Even or not) Time Series |
| TimeVarConcurrentModel | Concurrent Multivariate Models with Time-Varying Coefficients |
| timevarcorr | Time Varying Correlation |
| timevis | Create Interactive Timeline Visualizations in R |
| TimeVizPro | Dynamic Data Explorer: Visualize and Forecast with 'TimeVizPro' |
| TimeVTree | Survival Analysis of Time Varying Coefficients Using a Tree-Based Approach |
| TIMP | Fitting Separable Nonlinear Models in Spectroscopy and Microscopy |
| timsac | Time Series Analysis and Control Package |
| Tinflex | A Universal Non-Uniform Random Number Generator |
| tinkr | Cast '(R)Markdown' Files to 'XML' and Back Again |
| tinsel | Transform Functions using Decorators |
| tint | 'tint' is not 'Tufte' |
| tinter | Generate a Monochromatic Palette |
| tintin | Tintin Palette Generator |
| tinyarray | Expression Data Analysis and Visualization |
| tinycodet | Functions to Help in your Coding Etiquette |
| tinylabels | Lightweight Variable Labels |
| tinyplot | Lightweight Extension of the Base R Graphics System |
| tinyProject | A Lightweight Template for Data Analysis Projects |
| tinyscholar | Get and Show Personal 'Google Scholar' Profile |
| tinysnapshot | Snapshots for Unit Tests using the 'tinytest' Framework |
| tinyspotifyr | Tinyverse R Wrapper for the 'Spotify' Web API |
| tinytable | Simple and Configurable Tables in 'HTML', 'LaTeX', 'Markdown', 'Word', 'PNG', 'PDF', and 'Typst' Formats |
| tinytest | Lightweight and Feature Complete Unit Testing Framework |
| tinytest2JUnit | Convert 'tinytest' Output to JUnit XML |
| tinytex | Helper Functions to Install and Maintain TeX Live, and Compile LaTeX Documents |
| tinythemes | Lightweight Repackaging of 'Themes' for 'ggplot2' |
| tinytiger | Lightweight Interface to TIGER/Line Shapefiles |
| tip | Bayesian Clustering Using the Table Invitation Prior (TIP) |
| tipa | Tau-Independent Phase Analysis for Circadian Time-Course Data |
| TipDatingBeast | Using Tip Dates with Phylogenetic Trees in BEAST |
| tipitaka | Data and Tools for Analyzing the Pali Canon |
| tipmap | Tipping Point Analysis for Bayesian Dynamic Borrowing |
| tippy | Add Tooltips to 'R markdown' Documents or 'Shiny' Apps |
| tipr | Tipping Point Analyses |
| TiPS | Trajectories and Phylogenies Simulator |
| tipsae | Tools for Handling Indices and Proportions in Small Area Estimation |
| tis | Time Indexes and Time Indexed Series |
| TITAN2 | Threshold Indicator Taxa Analysis |
| titanic | Titanic Passenger Survival Data Set |
| TITEgBOIN | Time-to-Event Dose-Finding Design for Multiple Toxicity Grades |
| titeIR | Isotonic Designs for Phase 1 Trials with Late-Onset Toxicities |
| titrationCurves | Acid/Base, Complexation, Redox, and Precipitation Titration Curves |
| TKCat | Tailored Knowledge Catalog |
| tkImgR | Simple Image Viewer for R Using the 'tcltk' Package |
| tkrplot | TK Rplot |
| tkRplotR | Display Resizable Plots |
| tLagInterim | Interim Monitoring of Clinical Trials with Time-Lagged Outcome |
| tLagPropOdds | Proportional Odds Model with Censored, Time-Lagged Categorical Outcome |
| tlars | The T-LARS Algorithm: Early-Terminated Forward Variable Selection |
| Tlasso | Non-Convex Optimization and Statistical Inference for Sparse Tensor Graphical Models |
| TLCAR | Computation of Topp-Leone Cauchy Rayleigh (TLCAR ) distribution's properties |
| tldr | T Loux Doing R: Functions to Simplify Data Analysis and Reporting |
| TLIC | The LIC for T Distribution Regression Analysis |
| tlm | Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables |
| TLMoments | Calculate TL-Moments and Convert Them to Distribution Parameters |
| tlrmvnmvt | Low-Rank Methods for MVN and MVT Probabilities |
| tls | Tools of Total Least Squares in Error-in-Variables Models |
| tm | Text Mining Package |
| tm.plugin.alceste | Import Texts from Files in the 'Alceste' Format Using the 'tm' Text Mining Framework |
| tm.plugin.dc | Text Mining Distributed Corpus Plug-in |
| tm.plugin.europresse | Import Articles from 'Europresse' Using the 'tm' Text Mining Framework |
| tm.plugin.factiva | Import Articles from 'Factiva' Using the 'tm' Text Mining Framework |
| tm.plugin.koRpus | Full Corpus Support for the 'koRpus' Package |
| tm.plugin.lexisnexis | Import Articles from 'LexisNexis' Using the 'tm' Text Mining Framework |
| tm.plugin.mail | Text Mining E-Mail Plug-in |
| tm1r | The Integration Between 'IBM COGNOS TM1' and R |
| tmap | Thematic Maps |
| tmaptools | Thematic Map Tools |
| TMB | Template Model Builder: A General Random Effect Tool Inspired by 'ADMB' |
| tmbstan | MCMC Sampling from 'TMB' Model Object using 'Stan' |
| TmCalculator | Melting Temperature of Nucleic Acid Sequences |
| tmcn | A Text Mining Toolkit for Chinese |
| TMDb | Access to TMDb API |
| Tmisc | Turner Miscellaneous |
| TML | Tropical Geometry Tools for Machine Learning |
| tmle | Targeted Maximum Likelihood Estimation |
| tmod | Feature Set Enrichment Analysis for Metabolomics and Transcriptomics |
| tmplate | Code Generation Based on Templates |
| tmpm | Trauma Mortality Prediction Model |
| tmsens | Sensitivity Analysis Using the Trimmed Means Estimator |
| tmt | Estimation of the Rasch Model for Multistage Tests |
| TMTI | Too Many, Too Improbable (TMTI) Test Procedures |
| tmvmixnorm | Sampling from Truncated Multivariate Normal and t Distributions |
| tmvnsim | Truncated Multivariate Normal Simulation |
| tmvtnorm | Truncated Multivariate Normal and Student t Distribution |
| tmvtnsim | Truncated Multivariate Normal and t Distribution Simulation |
| TNC | Temporal Network Centrality (TNC) Measures |
| tnet | Weighted, Two-Mode, and Longitudinal Networks Analysis |
| tnl.Test | Non-Parametric Tests for the Two-Sample Problem |
| TNRS | Taxonomic Name Resolution Service |
| tntpr | Data Analysis Tools Customized for TNTP |
| toastui | Interactive Tables, Calendars and Charts for the Web |
| TOC | Total Operating Characteristic Curve and ROC Curve |
| todor | Find All TODO Comments and More |
| togglr | 'Toggl.com' Api for 'Rstudio' |
| TOHM | Testing One Hypothesis Multiple Times |
| tokenbrowser | Create Full Text Browsers from Annotated Token Lists |
| tokenizers | Fast, Consistent Tokenization of Natural Language Text |
| tokenizers.bpe | Byte Pair Encoding Text Tokenization |
| tolerance | Statistical Tolerance Intervals and Regions |
| tomba | Official R Library for Tomba Email Finder |
| tongfen | Make Data Based on Different Geographies Comparable |
| toolbox | List, String, and Meta Programming Utility Functions |
| toolmaRk | Tests for Same-Source of Toolmarks |
| tools4uplift | Tools for Uplift Modeling |
| ToolsForCoDa | Multivariate Tools for Compositional Data Analysis |
| toolStability | Tool for Stability Indices Calculation |
| TooManyCellsR | An R Wrapper for 'TooManyCells' |
| toOrdinal | Cardinal to Ordinal Number & Date Conversion |
| Toothnroll | Dental Tissues Landmarking Measuring and Mapping |
| topChef | Top Chef Data |
| TopDom | An Efficient and Deterministic Method for Identifying Topological Domains in Genomes |
| topdowntimeratio | Top-Down Time Ratio Segmentation for Coordinate Trajectories |
| topicdoc | Topic-Specific Diagnostics for LDA and CTM Topic Models |
| topiclabels | Automated Topic Labeling with Language Models |
| topicmodels | Topic Models |
| topicmodels.etm | Topic Modelling in Embedding Spaces |
| TopicScore | The Topic SCORE Algorithm to Fit Topic Models |
| TopKLists | Inference, Aggregation and Visualization for Top-K Ranked Lists |
| TopKSignal | A Convex Optimization Tool for Signal Reconstruction from Multiple Ranked Lists |
| topoDistance | Calculating Topographic Paths and Distances |
| topologyGSA | Gene Set Analysis Exploiting Pathway Topology |
| toposort | Topological Sorting Algorithms |
| topr | Create Custom Plots for Viewing Genetic Association Results |
| toprdata | Gene and Exon Data from Ensembl |
| topsis | TOPSIS method for multiple-criteria decision making (MCDM) |
| TopSisWM | Multi-Criteria Method for Decision (TOPSIS) |
| tor | Import Multiple Files From a Single Directory at Once |
| torch | Tensors and Neural Networks with 'GPU' Acceleration |
| torchaudio | R Interface to 'pytorch”s 'torchaudio' |
| torchdatasets | Ready to Use Extra Datasets for Torch |
| torchopt | Advanced Optimizers for Torch |
| torchvision | Models, Datasets and Transformations for Images |
| torchvisionlib | Additional Operators for Image Models |
| TORDs | Third Order Rotatable Designs (TORDs) |
| tornado | Plots for Model Sensitivity and Variable Importance |
| tosca | Tools for Statistical Content Analysis |
| toscmask | Improved Versions of Base Functions |
| toscutil | Utility Functions |
| TOSI | Two-Directional Simultaneous Inference for High-Dimensional Models |
| tosr | Create the Tree of Science from WoS and Scopus |
| TOSTER | Two One-Sided Tests (TOST) Equivalence Testing |
| totalcensus | Extract Decennial Census and American Community Survey Data |
| TotalCopheneticIndex | Quantify the Balance of Phylogenetic Trees |
| TOU | Transformed Ornstein-Uhlenbeck Model for Adsorption Kinetics |
| touch | Tools of Utilization and Cost in Healthcare |
| touRnamentofchampions | Tournament of Champions Data |
| tourr | Tour Methods for Multivariate Data Visualisation |
| tower | Easy Middle Ware Library for 'shiny' |
| toweranNA | A Method for Handling Missing Values in Prediction Applications |
| ToxCrit | Calculates Safety Stopping Boundaries for a Single-Arm Trial using Bayes |
| toxEval | Exploring Biological Relevance of Environmental Chemistry Observations |
| toxpiR | Create ToxPi Prioritization Models |
| toxSummary | Visualize and Summarize Repeat-Dose Toxicology Study Results |
| TP.idm | Estimation of Transition Probabilities for the Illness-Death Model |
| TPAC | Tissue-Adjusted Pathway Analysis of Cancer (TPAC) |
| TPACData | Human Protein Atlas Data for Tissue-Adjusted Pathway Analysis of Cancer (TPAC) |
| tpAUC | Estimation and Inference of Two-Way pAUC, pAUC and pODC |
| tpc | Tiered PC Algorithm |
| TPCselect | Variable Selection via Threshold Partial Correlation |
| TPD | Methods for Measuring Functional Diversity Based on Trait Probability Density |
| TPEA | A Novel Topology-Based Pathway Enrichment Analysis Approach |
| TPES | Tumor Purity Estimation using SNVs |
| tpfp | Counts the Number of True Positives and False Positives |
| TPLSr | Thresholded Partial Least Squares Model for Neuroimaging Data |
| Tplyr | A Traceability Focused Grammar of Clinical Data Summary |
| tpm | FHWA TPM Score Calculation Functions |
| TPMplt | Tool-Kit for Dynamic Materials Model and Thermal Processing Maps |
| TPmsm | Estimation of Transition Probabilities in Multistate Models |
| tpn | Truncated Positive Normal Model and Extensions |
| tpr | Temporal Process Regression |
| tpwb | The Three Parameter Weibull Distribution |
| tqk | Get Financial Data in Korea |
| tr.iatgen | Translate 'iatgen' Generated QSF Files |
| TR8 | A Tool for Downloading Functional Traits Data for Plant Species |
| TraceAssist | Nonparametric Trace Regression via Sign Series Representation |
| tracee | Easily Save Output and Trace it Back to Code |
| tracenma | Database for Developing Transitivity Methodology in Network Meta-Analysis |
| tracer | Slick Call Stacks |
| tracerer | Tracer from R |
| tracheideR | Standardize Tracheidograms |
| track2KBA | Identifying Important Areas from Animal Tracking Data |
| trackdem | Particle Tracking and Demography |
| trackdf | Data Frame Class for Tracking Data |
| trackdown | Collaborative Editing of Rmd (or Rnw) Documents in Google Drive |
| trackeR | Infrastructure for Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices |
| trackeRapp | Interface for the Analysis of Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices |
| TrackReconstruction | Reconstruct Animal Tracks from Magnetometer, Accelerometer, Depth and Optional Speed Data |
| tractor.base | Read, Manipulate and Visualise Magnetic Resonance Images |
| trade | Tools for Trade Practitioners |
| tradepolicy | Replication of 'An Advanced Guide To Trade Policy Analysis' |
| TRADER | Tree Ring Analysis of Disturbance Events in R |
| tradestatistics | Open Trade Statistics API Wrapper and Utility Program |
| TrafficBDE | Traffic Predictions Using Neural Networks |
| trafo | Estimation, Comparison and Selection of Transformations |
| traineR | Predictive (Classification and Regression) Models Homologator |
| trainR | An Interface to the National Rail Enquiries Systems |
| trainsplit | Split a Dataframe, Tibble, or Data.table into Training and Test Sets |
| traipse | Shared Tools for Tracking Data |
| traitstrap | Bootstrap Trait Values to Calculate Moments |
| traj | Clustering of Functional Data Based on Measures of Change |
| trajectories | Classes and Methods for Trajectory Data |
| trajmsm | Marginal Structural Models with Latent Class Growth Analysis of Treatment Trajectories |
| trajr | Animal Trajectory Analysis |
| tram | Transformation Models |
| tramicp | Model-Based Causal Feature Selection for General Response Types |
| TraMineR | Trajectory Miner: a Sequence Analysis Toolkit |
| TraMineRextras | TraMineR Extension |
| tramME | Transformation Models with Mixed Effects |
| tramnet | Penalized Transformation Models |
| TRAMPR | 'TRFLP' Analysis and Matching Package for R |
| tramvs | Optimal Subset Selection for Transformation Models |
| transforEmotion | Sentiment Analysis for Text, Image and Video using Transformer Models |
| Transform | Statistical Transformations |
| transform.hazards | Transforms Cumulative Hazards to Parameter Specified by ODE System |
| transformer | Implementation of Transformer Deep Neural Network with Vignettes |
| transformmos | Transform MOS Values to be Robust for using Rank Based Statistics |
| transformr | Polygon and Path Transformations |
| transfR | Transfer of Hydrograph from Gauged to Ungauged Catchments |
| TransGraph | Transfer Graph Learning |
| translate.logit | Translation of Logit Regression Coefficients into Percentages |
| translit.uk | Ukrainian to Latin Transliteration |
| transmdl | Semiparametric Transformation Models |
| transmem | Treatment of Membrane-Transport Data |
| TransModel | Fit Linear Transformation Models for Right Censored Data |
| TransP | Implementation of Transportation Problem Algorithms |
| TransPhylo | Inference of Transmission Tree from a Dated Phylogeny |
| transplantr | Audit and Research Functions for Transplantation |
| transPlotR | Visualize Transcript Structures in Elegant Way |
| transport | Computation of Optimal Transport Plans and Wasserstein Distances |
| transreg | Penalised Regression with Multiple Sets of Prior Effects ('Transfer Learning') |
| TransTGGM | Transfer Learning for Tensor Graphical Models |
| transx | Transform Univariate Time Series |
| trapezoid | The Trapezoidal Distribution |
| Tratamentos.ad | Pacote Para Analise De Experimentos Com Testemunhas Adicionais |
| traudem | Use TauDEM |
| traveltimeR | Interface to 'Travel Time' API |
| trawl | Estimation and Simulation of Trawl Processes |
| TRD | Transmission Ratio Distortion |
| trdist | Univariate Proability Distributions with Truncation |
| treasury | Client for US Treasury XML Feed and Published Data |
| TreatmentPatterns | Analyzes Real-World Treatment Patterns of a Study Population of Interest |
| TreatmentSelection | Evaluate Treatment Selection Biomarkers |
| treats | Trees and Traits Simulations |
| tree | Classification and Regression Trees |
| tree.interpreter | Random Forest Prediction Decomposition and Feature Importance Measure |
| tree3d | 3D Tree Models |
| treebalance | Computation of Tree (Im)Balance Indices |
| treebase | Discovery, Access and Manipulation of 'TreeBASE' Phylogenies |
| TreeBUGS | Hierarchical Multinomial Processing Tree Modeling |
| treeClust | Cluster Distances Through Trees |
| treeDA | Tree-Based Discriminant Analysis |
| treedater | Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation |
| treeDbalance | Computation of 3D Tree Imbalance |
| TreeDep | Air Pollution Removal by Dry Deposition on Trees |
| TreeDiagram | Tree Diagram |
| treediff | Testing Differences Between Families of Trees |
| TreeDimensionTest | Trajectory Presence and Heterogeneity in Multivariate Data |
| TreeDist | Calculate and Map Distances Between Phylogenetic Trees |
| treefit | The First Software for Quantitative Trajectory Inference |
| treeheatr | Heatmap-Integrated Decision Tree Visualizations |
| treemap | Treemap Visualization |
| treemapify | Draw Treemaps in 'ggplot2' |
| TreeMineR | Tree-Based Scan Statistics |
| treenomial | Comparison of Trees using a Tree Defining Polynomial |
| treePlotArea | Correction Factors for Tree Plot Areas Intersected by Stand Boundaries |
| TreeRingShape | Recording Tree-Ring Shapes of Tree Disks with Manual Digitizing and Interpolating Model |
| TreeSearch | Phylogenetic Analysis with Discrete Character Data |
| treeshap | Compute SHAP Values for Your Tree-Based Models Using the 'TreeSHAP' Algorithm |
| TreeSim | Simulating Phylogenetic Trees |
| TreeSimGM | Simulating Phylogenetic Trees under General Bellman Harris and Lineage Shift Model |
| treesitter | Bindings to 'Tree-Sitter' |
| treesitter.r | 'R' Grammar for 'Tree-Sitter' |
| treesliceR | To Slice Phylogenetic Trees and Infer Evolutionary Patterns Over Time |
| treespace | Statistical Exploration of Landscapes of Phylogenetic Trees |
| treestartr | Generate Starting Trees for Combined Molecular, Morphological and Stratigraphic Data |
| treestats | Phylogenetic Tree Statistics |
| treestructure | Detect Population Structure Within Phylogenetic Trees |
| TreeTools | Create, Modify and Analyse Phylogenetic Trees |
| trekcolors | Star Trek Color Palettes |
| trekfont | Star Trek Fonts Collection |
| trelliscopejs | Create Interactive Trelliscope Displays |
| trelloR | Access the Trello API |
| tremendousr | Easily Send Rewards and Incentives with 'Tremendous' from R |
| TrenchR | Tools for Microclimate and Biophysical Ecology |
| trend | Non-Parametric Trend Tests and Change-Point Detection |
| trendchange | Innovative Trend Analysis and Time-Series Change Point Analysis |
| trendeval | Evaluate Trending Models |
| trending | Model Temporal Trends |
| TrendInTrend | Odds Ratio Estimation and Power Calculation for the Trend in Trend Model |
| TrendLSW | Wavelet Methods for Analysing Locally Stationary Time Series |
| trendsegmentR | Linear Trend Segmentation |
| TrendSLR | Estimating Trend, Velocity and Acceleration from Sea Level Records |
| TrendTM | Trend of High-Dimensional Time Series Matrix Estimation |
| Trendtwosub | Two Sample Order Free Trend Nonparametric Inference |
| trendyy | A Tidy Wrapper Around 'gtrendsR' |
| TRES | Tensor Regression with Envelope Structure |
| TRexSelector | T-Rex Selector: High-Dimensional Variable Selection & FDR Control |
| Tri.Hierarchical.IBDs | Tri-Hierarchical IBDs (Tri- Hierarchical Incomplete Block Designs) |
| triact | Analyzing the Lying Behavior of Cows from Accelerometer Data |
| TriadSim | Simulating Triad Genomewide Genotypes |
| TrialEmulation | Causal Analysis of Observational Time-to-Event Data |
| trialr | Clinical Trial Designs in 'rstan' |
| TrialSize | R Functions for Chapter 3,4,6,7,9,10,11,12,14,15 of Sample Size Calculation in Clinical Research |
| triangle | Distribution Functions and Parameter Estimates for the Triangle Distribution |
| triangulation | Determine Position of Observer |
| triangulr | High-Performance Triangular Distribution Functions |
| tricolore | A Flexible Color Scale for Ternary Compositions |
| TriDimRegression | Bayesian Statistics for 2D/3D Transformations |
| triebeard | 'Radix' Trees in 'Rcpp' |
| triggerstrategy | Trigger Strategy in Clinical Trials |
| tRigon | Toolbox for Integrative Pathomics Analysis |
| trigpoints | Data Set of Trig Points in Great Britain in British National Grid Coordinates |
| TriMatch | Propensity Score Matching of Non-Binary Treatments |
| trimcluster | Cluster Analysis with Trimming |
| trimetStops | Information on all of the TriMet Stops in the Portland Metro Area |
| trimmer | Trim an Object |
| trimr | An Implementation of Common Response Time Trimming Methods |
| trinROC | Statistical Tests for Assessing Trinormal ROC Data |
| TrioSGL | Trio Model with a Combination of Lasso and Group Lasso Regularization |
| trip | Tracking Data |
| tripack | Triangulation of Irregularly Spaced Data |
| tripEstimation | Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes |
| TripleR | Social Relation Model (SRM) Analyses for Single or Multiple Groups |
| triplesmatch | Match Triples Consisting of Two Controls and a Treated Unit or Vice Versa |
| triplot | Explaining Correlated Features in Machine Learning Models |
| tripsAndDipR | Identification of 2n and 3n Samples from Amplicon Sequencing Data |
| triptych | Diagnostic Graphics to Evaluate Forecast Performance |
| triversity | Diversity Measures on Tripartite Graphs |
| TRMF | Temporally Regularized Matrix Factorization |
| tRnslate | Translate R Code in Source Files |
| troopdata | Tools for Analyzing Cross-National Military Deployment and Basing Data |
| tropAlgebra | Tropical Algebraic Functions |
| TropFishR | Tropical Fisheries Analysis |
| trotter | Pseudo-Vectors Containing All Permutations, Combinations and Subsets of Objects Taken from a Vector |
| trouBBlme4SolveR | Troubles Solver for 'lme4' |
| TroublemakeR | Generates Spatial Problems in R for 'AMPL' |
| TrtCombo.FactorialExp.SR | Generation of Treatment Combination (in Standard Order) in 2^n Factorial Experiment |
| trtf | Transformation Trees and Forests |
| trtswitch | Treatment Switching |
| trud | Query the 'NHS TRUD API' |
| truelies | Bayesian Methods to Estimate the Proportion of Liars in Coin Flip Experiments |
| TrueSkillThroughTime | Skill Estimation Based on a Single Bayesian Network |
| truh | Two-Sample Nonparametric Testing Under Heterogeneity |
| TrumpetPlots | Visualization of Genetic Association Studies |
| truncAIPW | Doubly Robust Estimation under Covariate-Induced Dependent Left Truncation |
| TruncatedNormal | Truncated Multivariate Normal and Student Distributions |
| truncdist | Truncated Random Variables |
| TruncExpFam | Truncated Exponential Family |
| truncnorm | Truncated Normal Distribution |
| truncnormbayes | Estimates Moments for a Truncated Normal Distribution using 'Stan' |
| truncreg | Truncated Gaussian Regression Models |
| truncSP | Semi-parametric estimators of truncated regression models |
| trust | Trust Region Optimization |
| trustedtimestamping | Create Trusted Timestamps of Datasets and Files |
| trustOptim | Trust Region Optimization for Nonlinear Functions with Sparse Hessians |
| tryCatchLog | Advanced 'tryCatch()' and 'try()' Functions |
| tryr | Client/Server Error Handling for HTTP API Frameworks |
| TSA | Time Series Analysis |
| tsallisqexp | Tsallis q-Exp Distribution |
| TSANN | Time Series Artificial Neural Network |
| tsapp | Time Series, Analysis and Application |
| tsbox | Class-Agnostic Time Series |
| tsBSS | Blind Source Separation and Supervised Dimension Reduction for Time Series |
| TSCI | Tools for Causal Inference with Possibly Invalid Instrumental Variables |
| TSclust | Time Series Clustering Utilities |
| tscopula | Time Series Copula Models |
| tscount | Analysis of Count Time Series |
| TSCS | Time Series Cointegrated System |
| tsdataleaks | Exploit Data Leakages in Time Series Forecasting Competitions |
| tsdb | Terribly-Simple Data Base for Time Series |
| tsdecomp | Decomposition of Time Series Data |
| TSdeeplearning | Deep Learning Model for Time Series Forecasting |
| tsdf | Two-/Three-Stage Designs for Phase 1&2 Clinical Trials |
| TSDFGS | Training Set Determination for Genomic Selection |
| tsdisagg2 | Time Series Disaggregation |
| TSdisaggregation | High-Dimensional Temporal Disaggregation |
| TSdist | Distance Measures for Time Series Data |
| tsdistributions | Location Scale Standardized Distributions |
| TSDT | Treatment-Specific Subgroup Detection Tool |
| tsDyn | Nonlinear Time Series Models with Regime Switching |
| TSE | Total Survey Error |
| TSEAL | Time Series Analysis Library |
| TSEind | Total Survey Error (Independent Samples) |
| tsensembler | Dynamic Ensembles for Time Series Forecasting |
| tsentiment | Fetching Tweet Data for Sentiment Analysis |
| TSEntropies | Time Series Entropies |
| tseries | Time Series Analysis and Computational Finance |
| tseriesChaos | Analysis of Nonlinear Time Series |
| tseriesEntropy | Entropy Based Analysis and Tests for Time Series |
| TSeriesMMA | Multiscale Multifractal Analysis of Time Series Data |
| tseriesTARMA | Analysis of Nonlinear Time Series Through Threshold Autoregressive Moving Average Models (TARMA) Models |
| TSEtools | Manage Data from Stock Exchange Markets |
| TSEwgt | Total Survey Error Under Multiple, Different Weighting Schemes |
| TSF | Two Stage Forecasting (TSF) for Long Memory Time Series in Presence of Structural Break |
| tsfeatures | Time Series Feature Extraction |
| tsfgrnn | Time Series Forecasting Using GRNN |
| tsfknn | Time Series Forecasting Using Nearest Neighbors |
| tsfngm | Time Series Forecasting using Nonlinear Growth Models |
| tsgarch | Univariate GARCH Models |
| tsgc | Time Series Methods Based on Growth Curves |
| TSGS | Trait Specific Gene Selection using SVM and GA |
| TSGSIS | Two Stage-Grouped Sure Independence Screening |
| TSHRC | Two Stage Hazard Rate Comparison |
| tsibble | Tidy Temporal Data Frames and Tools |
| tsibbledata | Diverse Datasets for 'tsibble' |
| tsibbletalk | Interactive Graphics for Tsibble Objects |
| tsintermittent | Intermittent Time Series Forecasting |
| tsiR | An Implementation of the TSIR Model |
| TSLSTM | Long Short Term Memory (LSTM) Model for Time Series Forecasting |
| TSLSTMplus | Long-Short Term Memory for Time-Series Forecasting, Enhanced |
| tsLSTMx | Predict Time Series Using LSTM Model Including Exogenous Variable to Denote Zero Values |
| tsmarch | Multivariate ARCH Models |
| tsmethods | Time Series Methods |
| TSMN | Truncated Scale Mixtures of Normal Distributions |
| tsModel | Time Series Modeling for Air Pollution and Health |
| tsmp | Time Series with Matrix Profile |
| TSMSN | Truncated Scale Mixtures of Skew-Normal Distributions |
| tsna | Tools for Temporal Social Network Analysis |
| tsne | T-Distributed Stochastic Neighbor Embedding for R (t-SNE) |
| tsnet | Fitting, Comparing, and Visualizing Networks Based on Time Series Data |
| tsoutliers | Detection of Outliers in Time Series |
| TSP | Traveling Salesperson Problem (TSP) |
| tsPI | Improved Prediction Intervals for ARIMA Processes and Structural Time Series |
| tspmeta | Instance Feature Calculation and Evolutionary Instance Generation for the Traveling Salesman Problem |
| TSPred | Functions for Benchmarking Time Series Prediction |
| tspredit | Time Series Prediction Integrated Tuning |
| tsqn | Applications of the Qn Estimator to Time Series (Univariate and Multivariate) |
| TSrepr | Time Series Representations |
| tsriadditive | Two Stage Residual Inclusion Additive Hazards Estimator |
| tsrobprep | Robust Preprocessing of Time Series Data |
| TSS.RESTREND | Time Series Segmentation of Residual Trends |
| tsSelect | Execution of Time Series Models |
| tssim | Simulation of Daily and Monthly Time Series |
| TSsmoothing | Trend Estimation of Univariate and Bivariate Time Series with Controlled Smoothness |
| TSSS | Time Series Analysis with State Space Model |
| TSstudio | Functions for Time Series Analysis and Forecasting |
| TSSVM | Time Series Forecasting using SVM Model |
| tstests | Time Series Goodness of Fit and Forecast Evaluation Tests |
| tstools | A Time Series Toolbox for Official Statistics |
| TSTutorial | Fitting and Predict Time Series Interactive Laboratory |
| tsutils | Time Series Exploration, Modelling and Forecasting |
| TSVC | Tree-Structured Modelling of Varying Coefficients |
| tsvio | Simple Utilities for Tab-Separated-Value (TSV) Files |
| tsviz | Easy and Interactive Time Series Visualization |
| tsvr | Timescale-Specific Variance Ratio for Use in Community Ecology |
| tswge | Time Series for Data Science |
| tsxtreme | Bayesian Modelling of Extremal Dependence in Time Series |
| TT | Display Tree Structured Data using Datatable Widget (DT) |
| TTAinterfaceTrendAnalysis | Temporal Trend Analysis Graphical Interface |
| ttbary | Barycenter Methods for Spatial Point Patterns |
| ttbbeer | US Beer Statistics from TTB |
| TTCA | Transcript Time Course Analysis |
| ttcg | Three-Term Conjugate Gradient for Unconstrained Optimization |
| ttdo | Extend 'tinytest' with 'diffobj' |
| tth | TeX-to-HTML/MathML Translators TtH/TtM |
| tTOlr | Likelihood Ratio Statistics for One or Two Sample T-Tests |
| TTR | Technical Trading Rules |
| TTS | Master Curve Estimates Corresponding to Time-Temperature Superposition |
| ttScreening | Genome-Wide DNA Methylation Sites Screening by Use of Training and Testing Samples |
| ttservice | A Service for Tidy Transcriptomics Software Suite |
| ttt | The Table Tool |
| tttplot | Time to Target Plot |
| ttutils | Utility Functions |
| tuber | Client for the YouTube API |
| tubern | R Client for the YouTube Analytics and Reporting API |
| tuckerR.mmgg | Three-Mode Principal Components Analysis |
| TUFLOWR | Helper Functions for 'TUFLOW FV' Models |
| tufte | Tufte's Styles for R Markdown Documents |
| tufterhandout | Tufte-style html document format for rmarkdown |
| TukeyC | Conventional Tukey Test |
| TukeyGH77 | Tukey g-&-h Distribution |
| TukeyRegion | Tukey Region and Median |
| tukeytrend | Tukeys Trend Test via Multiple Marginal Models |
| TULIP | A Toolbox for Linear Discriminant Analysis with Penalties |
| tumgr | Tumor Growth Rate Analysis |
| tune | Tidy Tuning Tools |
| TunePareto | Multi-Objective Parameter Tuning for Classifiers |
| tuneR | Analysis of Music and Speech |
| tuneRanger | Tune Random Forest of the 'ranger' Package |
| tuple | Find every match, or orphan, duplicate, triplicate, or other replicated values |
| turboEM | A Suite of Convergence Acceleration Schemes for EM, MM and Other Fixed-Point Algorithms |
| turkeyelections | The Most Comprehensive R Package for Turkish Election Results |
| turner | Turn Vectors and Lists of Vectors into Indexed Structures |
| TurtleGraphics | Turtle Graphics |
| Tushare | Interface to 'Tushare Pro' API |
| tutorial.helpers | Helper Functions for Creating Tutorials |
| TUvalues | Tools for Calculating Allocations in Game Theory using Exact and Approximated Methods |
| TUWmodel | Lumped/Semi-Distributed Hydrological Model for Education Purposes |
| tv | Tools for Creating Time-Varying Datasets |
| tvem | Time-Varying Effect Models |
| tvgarch | Time Varying GARCH Modelling |
| tvgeom | The Time-Varying (Right-Truncated) Geometric Distribution |
| tvm | Time Value of Money Functions |
| tvmComp | Discounting and Compounding Calculations for Various Scenarios |
| tvmediation | Time Varying Mediation Analysis |
| TVMM | Multivariate Tests for the Vector of Means |
| tvR | Total Variation Regularization |
| tvReg | Time-Varying Coefficient for Single and Multi-Equation Regressions |
| tvthemes | TV Show Themes and Color Palettes for 'ggplot2' Graphics |
| tvtools | Comprehensive Tools for Panel Data Analysis - 'tvtools' |
| twang | Toolkit for Weighting and Analysis of Nonequivalent Groups |
| twangContinuous | Toolkit for Weighting and Analysis of Nonequivalent Groups - Continuous Exposures |
| twangMediation | Twang Causal Mediation Modeling via Weighting |
| twangRDC | Gradient Boosting for Linkage Failure in FSRDCs |
| twdtw | Time-Weighted Dynamic Time Warping |
| tweedie | Evaluation of Tweedie Exponential Family Models |
| tweenr | Interpolate Data for Smooth Animations |
| tweetcheck | Parse and Validate Tweet Text |
| twenty48 | Play a Game of 2048 in the Console |
| twfy | Drive the API for TheyWorkForYou |
| twilio | An Interface to the Twilio API for R |
| twingp | A Fast Global-Local Gaussian Process Approximation |
| twinning | Data Twinning |
| Twitmo | Twitter Topic Modeling and Visualization for R |
| R Based Twitter Client | |
| twitteradsR | Get Twitter Ads Data via the 'Windsor.ai' API |
| TwitterAutomatedTrading | Automated Trading Using Tweets |
| twitterwidget | Render a Twitter Status in R Markdown Pages |
| twl | Two-Way Latent Structure Clustering Model |
| twn | Taxa Waterbeheer Nederland voor R |
| TwoArmSurvSim | Simulate Survival Data for Randomized Clinical Trials |
| twopartm | Two-Part Model with Marginal Effects |
| twopexp | The Two Parameter Exponential Distribution |
| twosamples | Fast Permutation Based Two Sample Tests |
| TwoSampleTest.HD | A Two-Sample Test for the Equality of Distributions for High-Dimensional Data |
| twosigma | DE Analysis for Single-Cell RNA-Sequencing Data |
| twoStageDesignTMLE | Targeted Maximum Likelihood Estimation for Two-Stage Study Design |
| TwoStepCLogit | Conditional Logistic Regression: A Two-Step Estimation Method |
| twoway | Analysis of Two-Way Tables |
| TwoWayFEWeights | Estimation of the Weights Attached to the Two-Way Fixed Effects Regressions |
| twowaytests | Two-Way Tests in Independent Groups Designs |
| twoxtwo | Work with Two-by-Two Tables |
| TWW | Growth Models |
| txshift | Efficient Estimation of the Causal Effects of Stochastic Interventions |
| txtplot | Text Based Plots |
| txtq | A Small Message Queue for Parallel Processes |
| typed | Support Types for Variables, Arguments, and Return Values |
| typehint | Auto-Check Types, Dimensions, and Values of Function Arguments |
| types | Type Annotations |
| typetracer | Trace Function Parameter Types |
| tzdb | Time Zone Database Information |
| tzupdater | Time Zone Database Updater |
| u5mr | Under-Five Child Mortality Estimation |
| uaparserjs | Parse 'User-Agent' Strings |
| uavRmp | UAV Mission Planner |
| UBayFS | A User-Guided Bayesian Framework for Ensemble Feature Selection |
| UBCRM | Simulate and Conduct Dose-Escalation Phase I Studies |
| ubiquity | PKPD, PBPK, and Systems Pharmacology Modeling Tools |
| UBL | An Implementation of Re-Sampling Approaches to Utility-Based Learning for Both Classification and Regression Tasks |
| ubms | Bayesian Models for Data from Unmarked Animals using 'Stan' |
| UBStats | Basic Statistics |
| uci | Urban Centrality Index |
| ucie | Mapping 3D Data into CIELab Color Space |
| ucimlrepo | Explore UCI ML Repository Datasets |
| uclust | Clustering and Classification Inference with U-Statistics |
| ucminf | General-Purpose Unconstrained Non-Linear Optimization |
| UComp | Automatic Univariate Time Series Modelling of many Kinds |
| UCR.ColumnNames | Fixes Column Names for Uniform Crime Report "Offenses Known and Clearance by Arrest" Datasets |
| UCSCXenaShiny | Interactive Analysis of UCSC Xena Data |
| UCSCXenaTools | Download and Explore Datasets from UCSC Xena Data Hubs |
| UdderQuarterInfectionData | Udder Quarter Infection Data |
| udpipe | Tokenization, Parts of Speech Tagging, Lemmatization and Dependency Parsing with the 'UDPipe' 'NLP' Toolkit |
| udunits2 | Udunits-2 Bindings for R |
| UEI | Compute Uniform Error Index |
| ufRisk | Risk Measure Calculation in Financial TS |
| ufs | A Collection of Utilities |
| ugatsdb | Uganda Time Series Database API |
| uGMAR | Estimate Univariate Gaussian and Student's t Mixture Autoregressive Models |
| ugomquantreg | Quantile Regression Modeling for Unit-Gompertz Responses |
| UHM | Unified Zero-Inflated Hurdle Regression Models |
| uHMM | Construct an Unsupervised Hidden Markov Model |
| ui | Uncertainty Intervals and Sensitivity Analysis for Missing Data |
| uiucthemes | 'R' 'Markdown' Themes for 'UIUC' Documents and Presentations |
| uk2us | Convert Words Between UK and US English |
| UKB.COVID19 | UK Biobank COVID-19 Data Processing and Risk Factor Association Tests |
| ukbabynames | UK Baby Names Data |
| ukbnmr | Removal of Unwanted Technical Variation from UK Biobank NMR Metabolomics Biomarker Data |
| ukbtools | Manipulate and Explore UK Biobank Data |
| UKFE | UK Flood Estimation |
| ukgasapi | API for UK Energy Market Information |
| UKgrid | The UK National Electricity Transmission System Dataset |
| uklr | Client to United Kingdom Land Registry |
| ukpolice | Download Data on UK Police and Crime |
| ulex | Unique Location Extractor |
| ulid | Generate Universally Unique 'Lexicographically' 'Sortable' Identifiers |
| ulrb | Unsupervised Learning Based Definition of Microbial Rare Biosphere |
| Ultimixt | Bayesian Analysis of Location-Scale Mixture Models using a Weakly Informative Prior |
| ultrapolaRplot | Plotting Ultrasound Tongue Traces |
| umap | Uniform Manifold Approximation and Projection |
| Umatrix | Visualization of Structures in High-Dimensional Data |
| umbridge | Integration for the UM-Bridge Protocol |
| umiAnalyzer | Tools for Analyzing Sequencing Data with Unique Molecular Identifiers |
| Umoments | Unbiased Central Moment Estimates |
| ump | Uniformly Most Powerful Tests |
| Umpire | Simulating Realistic Gene Expression and Clinical Data |
| umx | Structural Equation Modeling and Twin Modeling in R |
| UnalR | Una implementación de funciones de uso interno |
| unbalhaar | Function Estimation via Unbalanced Haar Wavelets |
| UncDecomp | Uncertainty Decomposition |
| uncertainty | Uncertainty Estimation and Contribution Analysis |
| uncertainUCDP | Parametric Mixture Models for Uncertainty Estimation of Fatalities in UCDP Conflict Data |
| uncmbb | UNC Men's Basketball Match Results Since 1949-1950 Season |
| uncorbets | Uncorrelated Bets via Minimum Torsion Algorithm |
| UNCOVER | Utilising Normalisation Constant Optimisation via Edge Removal (UNCOVER) |
| understandBPMN | Calculator of Understandability Metrics for BPMN |
| unglue | Extract Matched Substrings Using a Pattern |
| ungroup | Penalized Composite Link Model for Efficient Estimation of Smooth Distributions from Coarsely Binned Data |
| unhcrthemes | UNHCR 'ggplot2' Theme and Colour Palettes |
| unheadr | Handle Data with Messy Header Rows and Broken Values |
| uni.shrinkage | Shrinkage Estimation for Univariate Normal Mean |
| uni.survival.tree | A Survival Tree Based on Stabilized Score Tests for High-dimensional Covariates |
| uniah | Unimodal Additive Hazards Model |
| Unico | Unified Cross-Omics Deconvolution |
| Unicode | Unicode Data and Utilities |
| unicol | The Colors of your University |
| UniExactFunTest | Uniform Exact Functional Tests for Contingency Tables |
| unifDAG | Uniform Sampling of Directed Acyclic Graphs |
| unifed | The Unifed Distribution |
| UnifiedDoseFinding | Dose-Finding Methods for Non-Binary Outcomes |
| unifir | A Unifying API for Calling the 'Unity' '3D' Video Game Engine |
| uniformly | Uniform Sampling |
| unigd | Universal Graphics Device |
| UniIsoRegression | Unimodal and Isotonic L1, L2 and Linf Regression |
| unikn | Graphical Elements of the University of Konstanz's Corporate Design |
| unine | Unine Light Stemmer |
| UniprotR | Retrieving Information of Proteins from Uniprot |
| uniqtag | Abbreviate Strings to Short, Unique Identifiers |
| uniReg | Unimodal Penalized Spline Regression using B-Splines |
| unisensR | Read 'Unisens' Data |
| uniset | Dynamic Settings File |
| UnitCircle | Check if Roots of a Polynomial Lie Outside the Unit Circle |
| unitedR | Assessment and Evaluation of Formations in United |
| unitizer | Interactive R Unit Tests |
| unitquantreg | Parametric Quantile Regression Models for Bounded Data |
| units | Measurement Units for R Vectors |
| UnitStat | Performs Unit Root Test Statistics |
| unittest | TAP-Compliant Unit Testing |
| unival | Assessing Essential Unidimensionality Using External Validity Information |
| univariateML | Maximum Likelihood Estimation for Univariate Densities |
| UniversalCVI | Hard and Soft Cluster Validity Indices |
| universals | S3 Generics for Bayesian Analyses |
| univOutl | Detection of Univariate Outliers |
| UnivRNG | Univariate Pseudo-Random Number Generation |
| unix | POSIX System Utilities |
| unjoin | Separate a Data Frame by Normalization |
| unmarked | Models for Data from Unmarked Animals |
| unmconf | Modeling with Unmeasured Confounding |
| unnest | Unnest Hierarchical Data Structures |
| UNPaC | Non-Parametric Cluster Significance Testing with Reference to a Unimodal Null Distribution |
| unpivotr | Unpivot Complex and Irregular Data Layouts |
| UnplanSimon | Methods for Managing Enrollment Deviation in Simon's Two-Stage Design |
| unrepx | Analysis and Graphics for Unreplicated Experiments |
| unrtf | Extract Text from Rich Text Format (RTF) Documents |
| unstruwwel | Detect and Parse Historic Dates |
| unsystation | Stationarity Test Based on Unsystematic Sub-Sampling |
| untb | Ecological Drift under the UNTB |
| unusualprofile | Calculates Conditional Mahalanobis Distances |
| unvotes | United Nations General Assembly Voting Data |
| uotm | Uncertainty of Time Series Model Selection Methods |
| UpAndDownPlots | Displays Percentage and Absolute Changes |
| UPCM | Uncertainty in Partial Credit Models |
| updateme | Informative Messages About Outdated Packages |
| updater | Utilities for Updating R |
| updog | Flexible Genotyping for Polyploids |
| UpDown | Detecting Group Disturbances from Longitudinal Observations |
| UPG | Efficient Bayesian Algorithms for Binary and Categorical Data Regression Models |
| upndown | Utilities and Design Aids for Up-and-Down Dose-Finding Studies |
| upsetjs | 'HTMLWidget' Wrapper of 'UpSet.js' for Exploring Large Set Intersections |
| UpSetR | A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets |
| UpSetVP | An Alternative Visualization of VPA and HP in Canonical Analysis |
| upstartr | Utilities Powering the Globe and Mail's Data Journalism Template |
| UPSvarApprox | Approximate the Variance of the Horvitz-Thompson Total Estimator |
| uptasticsearch | Get Data Frame Representations of 'Elasticsearch' Results |
| uptimeRobot | Access the UptimeRobot Ping API |
| ura | Monitoring Rater Reliability |
| urbin | Unifying Estimation Results with Binary Dependent Variables |
| urca | Unit Root and Cointegration Tests for Time Series Data |
| urlchecker | Run CRAN URL Checks from Older R Versions |
| urlshorteneR | R Wrapper for the 'Bit.ly' and 'Is.gd'/'v.gd' URL Shortening Services |
| urltools | Vectorised Tools for URL Handling and Parsing |
| uroot | Unit Root Tests for Seasonal Time Series |
| URooTab | Tabular Reporting of 'EViews' Unit Root Tests |
| ursa | Non-Interactive Spatial Tools for Raster Processing and Visualization |
| us.census.geoheader | US 2010 Census SF2 Geographic Header Summary Levels 010-050 |
| usa | Updated US State Facts and Figures |
| USA.state.boundaries | WGS84 Datum Map of the USA, Including Puerto Rico and the U.S. Virgin Islands |
| usaidplot | Make Graphs with US Agency for International Development Colors |
| uscoauditlog | United States Copyright Office Product Management Division SR Audit Data Dataset Cleaning Algorithms |
| usdampr | Request USDA MPR Historical Data via the 'LMR' API |
| usdarnass | USDA NASS Quick Stats API |
| usdata | Data on the States and Counties of the United States |
| usdatasets | A Comprehensive Collection of U.S. Datasets |
| usdm | Uncertainty Analysis for Species Distribution Models |
| usedist | Distance Matrix Utilities |
| usedthese | Summarises Package & Function Usage |
| useful | A Collection of Handy, Useful Functions |
| usefun | A Collection of Useful Functions by John |
| usemodels | Boilerplate Code for 'Tidymodels' Analyses |
| usethis | Automate Package and Project Setup |
| usfertilizer | County-Level Estimates of Fertilizer Application in USA |
| USgas | The Demand for Natural Gas in the US |
| USgrid | The Demand and Supply for Electricity in the US |
| ushr | Understanding Suppression of HIV |
| usincometaxes | Calculate Federal and State Income Taxes in the United States |
| UsingR | Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition |
| uskewFactors | Model-Based Clustering via Mixtures of Unrestricted Skew-t Sactor Analyzer Models |
| usl | Analyze System Scalability with the Universal Scalability Law |
| usmap | US Maps Including Alaska and Hawaii |
| usmapdata | Mapping Data for 'usmap' Package |
| USP | U-Statistic Permutation Tests of Independence for all Data Types |
| USpopcenters | United States Centers of Population (Centroids) |
| ussherR | Ussher Data Set Drawn from 1658 Chronology |
| UStatBookABSC | A Companion Package to the Book "U-Statistics, M-Estimation and Resampling" |
| ustfd | API Client for US Treasury Fiscal Data |
| ustyc | Fetch US Treasury yield curve data |
| utc | Coordinated Universal Time Transformations |
| utf8 | Unicode Text Processing |
| utile.tables | Build Tables for Publication |
| utile.tools | Summarize Data for Publication |
| utile.visuals | Create Visuals for Publication |
| utility | Construct, Evaluate and Plot Value and Utility Functions |
| UtilityFrailtyPH12 | Implementing EFF-TOX and Monotone Utility Based Phase 12 Trials |
| utilityFunctionTools | P-Spline Regression for Utility Functions and Derived Measures |
| utilsIPEA | IPEA Common Functions |
| utiml | Utilities for Multi-Label Learning |
| utsf | Univariate Time Series Forecasting |
| uuid | Tools for Generating and Handling of UUIDs |
| uwedragon | Data Research, Access, Governance Network : Statistical Disclosure Control |
| UWHAM | Unbinned Weighted Histogram Analysis Method (UWHAM) |
| uwot | The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction |
| uxr | User Experience Research |
| V8 | Embedded JavaScript and WebAssembly Engine for R |
| vaccine | Statistical Tools for Immune Correlates Analysis of Vaccine Clinical Trial Data |
| vachette | A Method for Visualization of Pharmacometric Models |
| vacuum | Tukey's Vacuum Cleaner |
| vader | Valence Aware Dictionary and sEntiment Reasoner (VADER) |
| vaersNDvax | Non-Domestic Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present |
| vaersvax | US Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present |
| vagalumeR | Access to the 'Vagalume' API |
| vagam | Variational Approximations for Generalized Additive Models |
| valaddin | Functional Input Validation |
| valection | Sampler for Verification Studies |
| valentine | Spread the Love for R Packages with Poetry |
| VALERIE | Visualising Splicing at Single-Cell Resolution |
| valet | Provide R Client to the Bank of Canada's Valet API |
| valhallr | A Tidy Interface to the 'Valhalla' Routing Engine |
| validann | Validation Tools for Artificial Neural Networks |
| validata | Validate Data Frames |
| validate | Data Validation Infrastructure |
| validateIt | Validating Topic Coherence and Topic Labels |
| validatesuggest | Generate Suggestions for Validation Rules |
| validatetools | Checking and Simplifying Validation Rule Sets |
| VALIDICLUST | VALID Inference for Clusters Separation Testing |
| validmind | Interface to the 'ValidMind' Platform |
| valmetrics | Metrics and Plots for Model Evaluation |
| valorate | Velocity and Accuracy of the LOg-RAnk TEst |
| valottery | Results from the Virginia Lottery Draw Games |
| valr | Genome Interval Arithmetic |
| valueEQ5D | Scoring EQ-5d Descriptive System |
| valuemap | Making Choropleth Map |
| valueSetCompare | Comparing HRQoL Instrument Value Sets |
| VAM | Variance-Adjusted Mahalanobis |
| vamc | A Monte Carlo Valuation Framework for Variable Annuities |
| vampyr | Factor Analysis Controlling the Effects of Response Bias |
| VancouvR | Access the 'City of Vancouver' Open Data API |
| vandalico | Evaluation of Presence-Absence Models |
| vangogh | A Vincent Van Gogh Color Palette Generator |
| vannstats | Simplified Statistics for PA 606 |
| vanquish | Variant Quality Investigation Helper |
| vapour | Access to the 'Geospatial Data Abstraction Library' ('GDAL') |
| VAR.etp | VAR Modelling: Estimation, Testing, and Prediction |
| VAR.spec | Allows Specifying a Bivariate VAR (Vector Autoregression) with Desired Spectral Characteristics |
| varband | Variable Banding of Large Precision Matrices |
| varbin | Optimal Binning of Continuous and Categorical Variables |
| varbvs | Large-Scale Bayesian Variable Selection Using Variational Methods |
| varclust | Variables Clustering |
| VARDetect | Multiple Change Point Detection in Structural VAR Models |
| vardiag | Variogram Diagnostics |
| vardpoor | Variance Estimation for Sample Surveys by the Ultimate Cluster Method |
| VarED | Variance Estimation using Difference-Based Methods |
| VaRES | Computes Value at Risk and Expected Shortfall for over 100 Parametric Distributions |
| varEst | Variance Estimation |
| varhandle | Functions for Robust Variable Handling |
| variability | Genetic Variability Analysis for Plant Breeding Research |
| variables | Variable Descriptions |
| VariableScreening | High-Dimensional Screening for Semiparametric Longitudinal Regression |
| varian | Variability Analysis in R |
| VarianceGamma | The Variance Gamma Distribution |
| variantspark | A 'Sparklyr' Extension for 'VariantSpark' |
| variationalDCM | Variational Bayesian Estimation for Diagnostic Classification Models |
| varImp | RF Variable Importance for Arbitrary Measures |
| variosig | Testing Spatial Dependence Using Empirical Variogram |
| vaRiskScore | VA CVD Risk Score |
| varitas | Variant Calling in Targeted Analysis Sequencing Data |
| varjmcm | Estimations for the Covariance of Estimated Parameters in Joint Mean-Covariance Models |
| varoc | Value Added Receiver Operating Characteristics Curve |
| varrank | Heuristics Tools Based on Mutual Information for Variable Ranking |
| VarRedOpt | A Framework for Variance Reduction |
| VarReg | Semi-Parametric Variance Regression |
| vars | VAR Modelling |
| varSel | Sequential Forward Floating Selection using Jeffries-Matusita Distance |
| VARSELECTEXPOSURE | Variable Selection Methods Including an Exposure Variable |
| VarSelLCM | Variable Selection for Model-Based Clustering of Mixed-Type Data Set with Missing Values |
| varSelRF | Variable Selection using Random Forests |
| VARshrink | Shrinkage Estimation Methods for Vector Autoregressive Models |
| vartest | Tests for Variance Homogeneity |
| varTestnlme | Variance Components Testing for Linear and Nonlinear Mixed Effects Models |
| varycoef | Modeling Spatially Varying Coefficients |
| vasicek | Miscellaneous Functions for Vasicek Distribution |
| vasicekreg | Regression Modeling Using Vasicek Distribution |
| vatcheckapi | Client for the 'vatcheckapi.com' VAT Validation API |
| vaultr | Vault Client for Secrets and Sensitive Data |
| vaxpmx | Vaccines Pharmacometrics |
| VBel | Variational Bayes for Fast and Accurate Empirical Likelihood Inference |
| VBJM | Variational Inference for Joint Model |
| VBLPCM | Variational Bayes Latent Position Cluster Model for Networks |
| VBsparsePCA | The Variational Bayesian Method for Sparse PCA |
| VBTree | Vector Binary Tree to Make Your Data Management More Efficient |
| VBV | The Generalized Berlin Method for Time Series Decomposition |
| VC2copula | Extend the 'copula' Package with Families and Models from 'VineCopula' |
| VCA | Variance Component Analysis |
| vccp | Vine Copula Change Point Detection in Multivariate Time Series |
| vcd | Visualizing Categorical Data |
| vcdExtra | 'vcd' Extensions and Additions |
| vcfppR | Rapid Manipulation of the Variant Call Format (VCF) |
| vcfR | Manipulate and Visualize VCF Data |
| vchartr | Interactive Charts with the 'JavaScript' 'VChart' Library |
| vcmeta | Varying Coefficient Meta-Analysis |
| vcov | Variance-Covariance Matrices and Standard Errors |
| vcPB | Longitudinal PB Varying-Coefficient Groupwise Disparity Model |
| vcpen | Penalized Variance Components Analysis |
| vcr | Record 'HTTP' Calls to Disk |
| vcrpart | Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models |
| vctrs | Vector Helpers |
| vctsfr | Visualizing Collections of Time Series Forecasts |
| vcvComp | Comparison of Variance - Covariance Patterns |
| VDAP | Peptide Array Analysis Tools |
| vdar | Discriminant Analysis Incorporating Individual Uncertainties |
| vdg | Variance Dispersion Graphs and Fraction of Design Space Plots |
| vdiffr | Visual Regression Testing and Graphical Diffing |
| vDiveR | Visualization of Viral Protein Sequence Diversity Dynamics |
| VDJgermlines | Variable, Diversity and Joining Sequences from Various Species |
| VDPO | Working with and Analyzing Functional Data of Varying Lengths |
| VDSM | Visualization of Distribution of Selected Model |
| VDSPCalibration | Statistical Methods for Designing and Analyzing a Calibration Study |
| vec2dtransf | 2D Cartesian Coordinate Transformation |
| veccompare | Perform Set Operations on Vectors, Automatically Generating All n-Wise Comparisons, and Create Markdown Output |
| VeccTMVN | Multivariate Normal Probabilities using Vecchia Approximation |
| VecDep | Measuring Copula-Based Dependence Between Random Vectors |
| vecsets | Like Set Tools in 'Base' Package but Keeps Duplicate Elements |
| vectorbitops | Vector Bitwise Operations |
| VectorCodeR | Easily Analyze Your Gait Patterns Using Vector Coding Technique |
| vectorsurvR | Data Access and Analytical Tools for 'VectorSurv' Users |
| vectorwavelet | Vector Wavelet Coherence for Multiple Time Series |
| VedicDateTime | Vedic Calendar System |
| vegalite | Tools to Encode Visualizations with the 'Grammar of Graphics'-Like 'Vega-Lite' 'Spec' |
| vegan | Community Ecology Package |
| vegan3d | Static and Dynamic 3D and Editable Interactive Plots for the 'vegan' Package |
| vegawidget | 'Htmlwidget' for 'Vega' and 'Vega-Lite' |
| vegclust | Fuzzy Clustering of Vegetation Data |
| vegdata | Access Vegetation Databases and Treat Taxonomy |
| vegperiod | Determine Thermal Vegetation Periods |
| vegtable | Handling Vegetation Data Sets |
| vein | Vehicular Emissions Inventories |
| vek | Predicate Helper Functions for Testing Simple Atomic Vectors |
| velociraptr | Fossil Analysis |
| vembedr | Embed Video in HTML |
| venn | Draw Venn Diagrams |
| VennDiagram | Generate High-Resolution Venn and Euler Plots |
| venneuler | Venn and Euler Diagrams |
| vennplot | Venn Diagrams in 2D and 3D |
| verbaliseR | Make your Text Mighty Fine |
| verbalisr | Describe Pedigree Relationships in Words |
| verhoeff | Implementation of the 'Verhoeff' Check Digit Algorithm |
| verification | Weather Forecast Verification Utilities |
| vermeulen | Biomarker Data Set by Vermeulen et al. (2009) |
| versioning | Settings and File I/O using a Configuration YAML File |
| versions | Query and Install Specific Versions of Packages on CRAN |
| versionsort | Sort and Order Version Codes |
| versus | Compare Data Frames |
| VertexSimilarity | Creates Vertex Similarity Matrix for an Undirected Graph |
| VertexWiseR | Simplified Vertex-Wise Analyses of Whole-Brain and Hippocampal Surface |
| VeryLargeIntegers | Store and Operate with Arbitrarily Large Integers |
| vesselr | Gradient and Vesselness Tools for Arrays and NIfTI Images |
| vetiver | Version, Share, Deploy, and Monitor Models |
| vetr | Trust, but Verify |
| VetResearchLMM | Linear Mixed Models - An Introduction with Applications in Veterinary Research |
| VEwaning | Vaccine Efficacy Over Time |
| VEwaningVariant | Vaccine Efficacy Over Time - Variant Aware |
| vfcp | Computation of v Values for U and Copula C(U, v) |
| vfinputs | Visual Filter Inputs for Shiny |
| VFP | Variance Function Program |
| vfprogression | Visual Field (VF) Progression Analysis and Plotting Methods |
| VFS | Vegetated Filter Strip and Erosion Model |
| VGAM | Vector Generalized Linear and Additive Models |
| VGAMdata | Data Supporting the 'VGAM' Package |
| VGAMextra | Additions and Extensions of the 'VGAM' Package |
| vglmer | Variational Inference for Hierarchical Generalized Linear Models |
| vhcub | Virus-Host Codon Usage Co-Adaptation Analysis |
| vhica | Vertical and Horizontal Inheritance Consistence Analysis |
| via | Virtual Arrays |
| viafr | Interface to the 'VIAF' ('Virtual International Authority File') API |
| VIC5 | The Variable Infiltration Capacity (VIC) Hydrological Model |
| vICC | Varying Intraclass Correlation Coefficients |
| vici | Vaccine Induced Cellular Immunogenicity with Bivariate Modeling |
| VicmapR | Access Victorian Spatial Data Through Web File Services (WFS) |
| Vicus | Exploiting Local Structures to Improve Network-Based Analysis of Biological Data |
| video | 'Shiny' Extension of 'video.js' |
| vietnamcode | Convert Vietnam Provincial Codes |
| vietnameseConverter | Convert Vietnamese Encodings |
| ViewPipeSteps | Create View Tabs of Pipe Chains |
| viewpoly | A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species |
| viewscape | Viewscape Analysis |
| VIGoR | Variational Bayesian Inference for Genome-Wide Regression |
| viking | State-Space Models Inference by Kalman or Viking |
| villager | A Framework for Designing and Running Agent Based Models |
| VIM | Visualization and Imputation of Missing Values |
| VIMean | Variability Independent of Mean |
| vimp | Perform Inference on Algorithm-Agnostic Variable Importance |
| vimpclust | Variable Importance in Clustering |
| VIMPS | Calculate Variable Importance with Knock Off Variables |
| vindecodr | Provides an Interface to the Department of Transportation VIN Decoder |
| VineCopula | Statistical Inference of Vine Copulas |
| vinereg | D-Vine Quantile Regression |
| vines | Multivariate Dependence Modeling with Vines |
| violinplotter | Plotting and Comparing Means with Violin Plots |
| vioplot | Violin Plot |
| vip | Variable Importance Plots |
| vipor | Plot Categorical Data Using Quasirandom Noise and Density Estimates |
| viraldomain | Applicability Domain Methods of Viral Load and CD4 Lymphocytes |
| viralmodels | Viral Load and CD4 Lymphocytes Regression Models |
| viralx | Explainers for Regression Models in HIV Research |
| VIRF | Computation of Volatility Impulse Response Function of Multivariate Time Series |
| viridis | Colorblind-Friendly Color Maps for R |
| viridisLite | Colorblind-Friendly Color Maps (Lite Version) |
| virtualPollen | Simulating Pollen Curves from Virtual Taxa with Different Life and Niche Traits |
| VirtualPop | Simulation of Populations by Sampling Waiting-Time Distributions |
| virtualspecies | Generation of Virtual Species Distributions |
| virtuoso | Interface to 'Virtuoso' using 'ODBC' |
| Virusparies | Visualize and Process Output from 'VirusHunterGatherer' |
| virustotal | R Client for the VirusTotal API |
| visa | Vegetation Imaging Spectroscopy Analyzer |
| visachartR | Wrapper for 'Visa Chart Components' |
| visaOTR | Valid Improved Sparsity A-Learning for Optimal Treatment Decision |
| VisCollin | Visualizing Collinearity Diagnostics |
| viscomp | Visualize Multi-Component Interventions in Network Meta-Analysis |
| viscomplexr | Phase Portraits of Functions in the Complex Number Plane |
| VisCov | Visualizing of Distributions of Covariance Matrices |
| visdat | Preliminary Visualisation of Data |
| ViSe | Visualizing Sensitivity |
| ViSiElse | A Visual Tool for Behavior Analysis over Time |
| visit | Vaccine Phase I Design with Simultaneous Evaluation of Immunogenicity and Toxicity |
| VisitorCounts | Modeling and Forecasting Visitor Counts Using Social Media |
| vismeteor | Analysis of Visual Meteor Data |
| visNetwork | Network Visualization using 'vis.js' Library |
| visOmopResults | Graphs and Tables for OMOP Results |
| visreg | Visualization of Regression Models |
| visStatistics | Automated Visualization of Statistical Tests |
| vistime | Pretty Timelines in R |
| vistla | Detecting Influence Paths with Information Theory |
| visTree | Visualization of Subgroups for Decision Trees |
| vistributions | Visualize Probability Distributions |
| VisualDom | Visualize Dominant Variables in Wavelet Multiple Correlation |
| visualFields | Statistical Methods for Visual Fields |
| visualize | Graph Probability Distributions with User Supplied Parameters and Statistics |
| Visualize.CRAN.Downloads | Visualize Downloads from 'CRAN' Packages |
| VisualizeSimon2Stage | Visualize Simon's Two-Stage Design |
| visualpred | Visualization 2D of Binary Classification Models |
| visvaR | Shiny-Based Statistical Solutions for Agricultural Research |
| visvow | Visible Vowels: Visualization of Vowel Variation |
| visxhclust | A Shiny App for Visual Exploration of Hierarchical Clustering |
| vita | Variable Importance Testing Approaches |
| vitae | Curriculum Vitae for R Markdown |
| vital | Tidy Analysis Tools for Mortality, Fertility, Migration and Population Data |
| vitality | Fitting Routines for the Vitality Family of Mortality Models |
| vivainsights | Analyze and Visualize Data from 'Microsoft Viva Insights' |
| vivaldi | Viral Variant Location and Diversity |
| vivid | Variable Importance and Variable Interaction Displays |
| vivo | Variable Importance via Oscillations |
| vizdraws | Visualize Draws from the Prior and Posterior Distributions |
| vkR | Access to VK API via R |
| VLF | Frequency Matrix Approach for Assessing Very Low Frequency Variants in Sequence Records |
| VLMC | Variable Length Markov Chains ('VLMC') Models |
| VLMCX | Variable Length Markov Chain with Exogenous Covariates |
| VLTimeCausality | Variable-Lag Time Series Causality Inference Framework |
| VMDecomp | Variational Mode Decomposition |
| VMDML | Variational Mode Decomposition Based Machine Learning Models |
| vmdTDNN | VMD Based Time Delay Neural Network Model |
| vmeasur | Quantify the Contractile Nature of Vessels Monitored under an Operating Microscope |
| vMF | Sampling from the von Mises-Fisher Distribution |
| vmr | Virtual Machines for R |
| vntrs | Variable Neighborhood Trust Region Search |
| vocaldia | Create and Manipulate Vocalisation Diagrams |
| voi | Expected Value of Information |
| voice | Tools for Voice Analysis, Speaker Recognition and Mood Inference |
| voiceR | Voice Analytics for Social Scientists |
| vol2birdR | Vertical Profiles of Biological Signals in Weather Radar Data |
| volatilityTrader | High Volatility Environment Option Trading Strategies Graphs |
| volcano3D | 3D Volcano Plots and Polar Plots for Three-Class Data |
| volcanoPlot | Volcano Plot for Clinical Trial Adverse Events |
| volesti | Volume Approximation and Sampling of Convex Polytopes |
| volker | High-Level Functions for Tabulating, Charting and Reporting Survey Data |
| volleystat | Detailed Statistics on Volleyball Matches |
| voluModel | Modeling Species Distributions in Three Dimensions |
| voronoiTreemap | Voronoi Treemaps with Added Interactivity by Shiny |
| VorteksExport | Export Dataframes to 'Vorteks' Software |
| vortexRdata | Example Data for R Package 'vortexR' |
| voson.tcn | Twitter Conversation Networks and Analysis |
| VOSONDash | User Interface for Collecting and Analysing Social Networks |
| vosonSML | Collecting Social Media Data and Generating Networks for Analysis |
| Voss | Generic Voss Algorithm (Random Sequential Additions) |
| vote | Election Vote Counting |
| voteogram | United States House and Senate Voting Cartogram Generators |
| voteSim | Generate Simulated Data for Voting Rules using Evaluations |
| votesmart | Wrapper for the Project 'VoteSmart' API |
| votesys | Voting Systems, Instant-Runoff Voting, Borda Method, Various Condorcet Methods |
| vottrans | Voter Transition Analysis |
| vov | CSS Animations for 'shiny' Elements |
| vowels | Vowel Manipulation, Normalization, and Plotting |
| voxel | Mass-Univariate Voxelwise Analysis of Medical Imaging Data |
| VoxR | Trees Geometry and Morphology from Unstructured TLS Data |
| vpc | Create Visual Predictive Checks |
| VPdtw | Variable Penalty Dynamic Time Warping |
| vprr | Processing and Visualization of Video Plankton Recorder Data |
| vrnmf | Volume-Regularized Structured Matrix Factorization |
| vroom | Read and Write Rectangular Text Data Quickly |
| vrtest | Variance Ratio Tests and Other Tests for Martingale Difference Hypothesis |
| vscc | Variable Selection for Clustering and Classification |
| vsd | Graphical Shim for Visual Survival Data Analysis |
| vse4ts | Identify Memory Patterns in Time Series Using Variance Scale Exponent |
| vsgoftest | Goodness-of-Fit Tests Based on Kullback-Leibler Divergence |
| vsmi | Variable Selection for Multiple Imputed Data |
| VSOLassoBag | Variable Selection Oriented LASSO Bagging Algorithm |
| vsp | Vintage Sparse PCA for Semi-Parametric Factor Analysis |
| vstdct | Nonparametric Estimation of Toeplitz Covariance Matrices |
| vstsr | Access to 'Azure DevOps' API via R |
| VSURF | Variable Selection Using Random Forests |
| VsusP | Variable Selection using Shrinkage Priors |
| vtable | Variable Table for Variable Documentation |
| vtreat | A Statistically Sound 'data.frame' Processor/Conditioner |
| vtree | Display Information About Nested Subsets of a Data Frame |
| VTShiny | Interactive Document for Working with Variance Analysis |
| vtype | Estimates the Variable Type in Error Afflicted Data |
| vudc | Visualization of Univariate Data for Comparison |
| vueR | 'Vuejs' Helpers and 'Htmlwidget' |
| VulnToolkit | Analysis of Tidal Datasets |
| VUROCS | Volume under the ROC Surface for Multi-Class ROC Analysis |
| vvauditor | Creates Assertion Tests |
| vvcanvas | 'Canvas' LMS API Integration |
| vvconverter | Apply Transformations to Data |
| vvdoctor | Statistical Test App with R 'shiny' |
| vvfiller | Fill Data Points |
| vvmover | Read and Write Data |
| vvsculptor | Apply Manipulations to Data Frames |
| vvshiny | Create Complex Shiny Apps More Easily |
| vvtableau | R Interface for 'Tableau' Services |
| vvtermtime | Interface for 'Semestry TermTime' Services |
| vwline | Draw Variable-Width Lines |
| VWPre | Tools for Preprocessing Visual World Data |
| W2CWM2C | A Graphical Tool for Wavelet (Cross) Correlation and Wavelet Multiple (Cross) Correlation Analysis |
| W3CMarkupValidator | R Interface to W3C Markup Validation Services |
| W4MRUtils | Utils List for W4M - Workflow for Metabolomics |
| WA | While-Alive Loss Rate for Recurrent Event in the Presence of Death |
| wacolors | Colorblind-Friendly Palettes from Washington State |
| WACS | Multivariate Weather-State Approach Conditionally Skew-Normal Generator |
| wactor | Word Factor Vectors |
| waffle | Create Waffle Chart Visualizations |
| waiter | Loading Screen for 'Shiny' |
| wakefield | Generate Random Data Sets |
| wal | Read and Write 'wal' Bitmap Image Files and Other 'Quake' Assets |
| waldo | Find Differences Between R Objects |
| walkboutr | Generate Walk Bouts from GPS and Accelerometry Data |
| walker | Bayesian Generalized Linear Models with Time-Varying Coefficients |
| walkscore | A Tidy Interface to the 'Walk Score' API |
| walkscoreAPI | Walk Score and Transit Score API |
| wallace | A Modular Platform for Reproducible Modeling of Species Niches and Distributions |
| WallomicsData | Datasets for Multi-Omics Integration in a Plant Abiotic Stress Context |
| wally | The Wally Calibration Plot for Risk Prediction Models |
| walmartAPI | Walmart Open API Wrapper |
| walrus | Robust Statistical Methods |
| WALS | Weighted-Average Least Squares Model Averaging |
| WaMaSim | Simulate Rehabilitation Strategies for Water Distribution Systems |
| wand | Retrieve 'Magic' Attributes from Files and Directories |
| WAnova | Welch's Anova from Summary Statistics |
| warabandi | Roster Generation of Turn for Weekdays:'warabandi' |
| warbleR | Streamline Bioacoustic Analysis |
| WARN | Weaning Age Reconstruction with Nitrogen Isotope Analysis |
| warp | Group Dates |
| warpMix | Mixed Effects Modeling with Warping for Functional Data Using B-Spline |
| washdata | Urban Water and Sanitation Survey Dataset |
| washeR | Time Series Outlier Detection |
| washex | Washington State Legislative Explorer |
| washi | Washington Soil Health Initiative Branding |
| washr | Publication Toolkit for Water, Sanitation and Hygiene (WASH) Data |
| WASP | Wavelet System Prediction |
| waspasR | Tool Kit to Implement a W.A.S.P.A.S. Based Multi-Criteria Decision Analysis Solution |
| waspr | Wasserstein Barycenters of Subset Posteriors |
| waterData | Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data |
| waterfall | Waterfall Charts |
| waterfalls | Create Waterfall Charts using 'ggplot2' Simply |
| waterquality | Satellite Derived Water Quality Detection Algorithms |
| waterYearType | Sacramento and San Joaquin Valley Water Year Types |
| Wats | Wrap Around Time Series Graphics |
| watson | Fitting and Simulating Mixtures of Watson Distributions |
| wav | Read and Write WAV Files |
| waveband | Computes Credible Intervals for Bayesian Wavelet Shrinkage |
| waved | Wavelet Deconvolution |
| WaveletANN | Wavelet ANN Model |
| WaveletArima | Wavelet-ARIMA Model for Time Series Forecasting |
| WaveletComp | Computational Wavelet Analysis |
| WaveletETS | Wavelet Based Error Trend Seasonality Model |
| WaveletGARCH | Fit the Wavelet-GARCH Model to Volatile Time Series Data |
| WaveletGBM | Wavelet Based Gradient Boosting Method |
| WaveletKNN | Wavelet Based K-Nearest Neighbor Model |
| WaveletLSTM | Wavelet Based LSTM Model |
| WaveletML | Wavelet Decomposition Based Hybrid Machine Learning Models |
| WaveletMLbestFL | The Best Wavelet Filter-Level for Prepared Wavelet-Based Models |
| WaveletRF | Wavelet-RF Hybrid Model for Time Series Forecasting |
| wavelets | Functions for Computing Wavelet Filters, Wavelet Transforms and Multiresolution Analyses |
| WaveletSVR | Wavelet-SVR Hybrid Model for Time Series Forecasting |
| wavemulcor | Wavelet Routines for Global and Local Multiple Regression and Correlation |
| waver | Calculate Fetch and Wave Energy |
| WaverideR | Extracting Signals from Wavelet Spectra |
| WaverR | Data Estimation using Weighted Averages of Multiple Regressions |
| waves | Vis-NIR Spectral Analysis Wrapper |
| WaveSampling | Weakly Associated Vectors (WAVE) Sampling |
| waveslim | Basic Wavelet Routines for One-, Two-, and Three-Dimensional Signal Processing |
| wavethresh | Wavelets Statistics and Transforms |
| wavScalogram | Wavelet Scalogram Tools for Time Series Analysis |
| waydown | Computation of Approximate Potentials for Weakly Non-Gradient Fields |
| WayFindR | Computing Graph Structures on WikiPathways |
| waywiser | Ergonomic Methods for Assessing Spatial Models |
| wbacon | Weighted BACON Algorithms |
| wbids | Seamless Access to World Bank International Debt Statistics (IDS) |
| wbs | Wild Binary Segmentation for Multiple Change-Point Detection |
| wbsd | Wild Bootstrap Size Diagnostics |
| wbstats | Programmatic Access to Data and Statistics from the World Bank API |
| wbsts | Multiple Change-Point Detection for Nonstationary Time Series |
| wcde | Download Data from the Wittgenstein Centre Human Capital Data Explorer |
| WCE | Weighted Cumulative Exposure Models |
| wcep | Survival Analysis for Weighted Composite Endpoints |
| WCluster | Clustering and PCA with Weights, and Data Nuggets Clustering |
| WCM | Water Cloud Model (WCM) for the Simulation of Leaf Area Index (LAI) and Soil Moisture (SM) from Microwave Backscattering |
| Wcompo | Semiparametric Proportional Means Regression of Weighted Composite Endpoint |
| wconf | Weighted Confusion Matrix |
| wCorr | Weighted Correlations |
| wcox | Weights to Correct for Outcome Dependent Sampling in Time to Event Data |
| WDI | World Development Indicators and Other World Bank Data |
| wdm | Weighted Dependence Measures |
| wdman | 'Webdriver'/'Selenium' Binary Manager |
| wdnet | Weighted and Directed Networks |
| wdnr.gis | Pull Spatial Layers from 'WDNR ArcGIS REST API' |
| wdpar | Interface to the World Database on Protected Areas |
| weaana | Analysis the Weather Data |
| weakARMA | Tools for the Analysis of Weak ARMA Models |
| wearables | Tools to Read and Convert Wearables Data |
| weatherindices | Calculate Weather Indices |
| weathermetrics | Functions to Convert Between Weather Metrics |
| weatherOz | An API Client for Australian Weather and Climate Data Resources |
| WeatherSentiment | Comprehensive Analysis of Tweet Sentiments and Weather Data |
| WebAnalytics | Web Server Log Analysis |
| webchem | Chemical Information from the Web |
| webdav | A Simple Interface for Interacting with 'WebDAV' Servers |
| webdeveloper | Functions for Web Development |
| webdriver | 'WebDriver' Client for 'PhantomJS' |
| webexercises | Create Interactive Web Exercises in 'R Markdown' (Formerly 'webex') |
| webfakes | Fake Web Apps for HTTP Testing |
| WebGestaltR | Gene Set Analysis Toolkit WebGestaltR |
| webglobe | 3D Interactive Globes |
| webmap | Create Interactive Web Maps Using 'The National Map' Services |
| webmockr | Stubbing and Setting Expectations on 'HTTP' Requests |
| webp | A New Format for Lossless and Lossy Image Compression |
| WebPower | Basic and Advanced Statistical Power Analysis |
| webr | Data and Functions for Web-Based Analysis |
| webreadr | Tools for Reading Formatted Access Log Files |
| webSDM | Including Known Interactions in Species Distribution Models |
| websearchr | Access Domains and Search Popular Websites |
| webshot | Take Screenshots of Web Pages |
| webshot2 | Take Screenshots of Web Pages |
| websocket | 'WebSocket' Client Library |
| webtrackR | Preprocessing and Analyzing Web Tracking Data |
| webuse | Import Stata 'webuse' Datasets |
| webutils | Utility Functions for Developing Web Applications |
| wec | Weighted Effect Coding |
| weed | Wrangler for Emergency Events Database |
| WEGE | A Metric to Rank Locations for Biodiversity Conservation |
| wehoop | Access Women's Basketball Play by Play Data |
| WeibullFit | Fits and Plots a Dataset to the Weibull Probability Distribution Function |
| weibullness | Goodness-of-Fit Test for Weibull Distribution (Weibullness) |
| WeibullR | Weibull Analysis for Reliability Engineering |
| WeibullR.ALT | Accelerated Life Testing Using 'WeibullR' |
| WeibullR.learnr | An Interactive Introduction to Life Data Analysis |
| WeibullR.plotly | Interactive Weibull Probability Plots |
| WeibullR.shiny | A 'Shiny' App for Weibull Analysis |
| weibulltools | Statistical Methods for Life Data Analysis |
| Weighted.Desc.Stat | Weighted Descriptive Statistics |
| weightedCL | Efficient and Feasible Inference for High-Dimensional Normal Copula Regression Models |
| WeightedCluster | Clustering of Weighted Data |
| WeightedEnsemble | Weighted Ensemble for Hybrid Model |
| weightedGCM | Weighted Generalised Covariance Measure Conditional Independence Test |
| WeightedPortTest | Weighted Portmanteau Tests for Time Series Goodness-of-Fit |
| weightedRank | Sensitivity Analysis Using Weighted Rank Statistics |
| WeightedROC | Fast, Weighted ROC Curves |
| weightedScores | Weighted Scores Method for Regression Models with Dependent Data |
| WeightedTreemaps | Generate and Plot Voronoi or Sunburst Treemaps from Hierarchical Data |
| WeightIt | Weighting for Covariate Balance in Observational Studies |
| weightQuant | Weights for Incomplete Longitudinal Data and Quantile Regression |
| weightr | Estimating Weight-Function Models for Publication Bias |
| weights | Weighting and Weighted Statistics |
| WeightSVM | Subject Weighted Support Vector Machines |
| weird | Functions and Data Sets for "That's Weird: Anomaly Detection Using R" by Rob J Hyndman |
| weirs | A Hydraulics Package to Compute Open-Channel Flow over Weirs |
| welchADF | Welch-James Statistic for Robust Hypothesis Testing under Heterocedasticity and Non-Normality |
| welo | Weighted and Standard Elo Rates |
| WeMix | Weighted Mixed-Effects Models Using Multilevel Pseudo Maximum Likelihood Estimation |
| wesanderson | A Wes Anderson Palette Generator |
| wevid | Quantifying Performance of a Binary Classifier Through Weight of Evidence |
| weyl | The Weyl Algebra |
| wfe | Weighted Linear Fixed Effects Regression Models for Causal Inference |
| wfg | Weighted Fast Greedy Algorithm |
| wfindr | Crossword, Scrabble and Anagram Solver |
| wflo | Data Set and Helper Functions for Wind Farm Layout Optimization Problems |
| wgaim | Whole Genome Average Interval Mapping for QTL Detection and Estimation using ASReml-R |
| WGCNA | Weighted Correlation Network Analysis |
| wget | Setting Download Method to 'wget' |
| WGScan | A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis |
| WgtEff | Functions for Weighting Effects |
| WH | Enhanced Implementation of Whittaker-Henderson Smoothing |
| WhatIf | Software for Evaluating Counterfactuals |
| WhatsR | Parsing, Anonymizing and Visualizing Exported 'WhatsApp' Chat Logs |
| whatthreewords | Work with the 'what3words' API for Easy Location Referencing |
| wheatmap | Incrementally Build Complex Plots using Natural Semantics |
| when | Definition of Date and Time Dimension Tables |
| where | Vectorised Substitution and Evaluation |
| whereami | Reliably Return the Source and Call Location of a Command |
| whereport | Geolocalization of IATA Codes |
| whippr | Tools for Manipulating Gas Exchange Data |
| whisker | {{mustache}} for R, Logicless Templating |
| whitebox | 'WhiteboxTools' R Frontend |
| whitechapelR | Advanced Policing Techniques for the Board Game "Letters from Whitechapel" |
| WhiteLabRt | Novel Methods for Reproduction Number Estimation, Back-Calculation, and Forecasting |
| whitening | Whitening and High-Dimensional Canonical Correlation Analysis |
| whitestrap | White Test and Bootstrapped White Test for Heteroskedasticity |
| WhiteStripe | White Matter Normalization for Magnetic Resonance Images |
| whitewater | Parallel Processing Options for Package 'dataRetrieval' |
| whoa | Evaluation of Genotyping Error in Genotype-by-Sequencing Data |
| whoami | Username, Full Name, Email Address, 'GitHub' Username of the Current User |
| whomds | Calculate Results from WHO Model Disability Survey Data |
| whSample | Utilities for Sampling |
| widals | Weighting by Inverse Distance with Adaptive Least Squares |
| widgetframe | 'Htmlwidgets' in Responsive 'iframes' |
| widyr | Widen, Process, then Re-Tidy Data |
| WienR | Derivatives of the First-Passage Time Density and Cumulative Distribution Function, and Random Sampling from the (Truncated) First-Passage Time Distribution |
| wiesbaden | Access Databases from the Federal Statistical Office of Germany |
| wig | Import WIG Data into R in Long Format |
| wikibooks | Functions and Datasets of the German WikiBook "GNU R" |
| WikidataQueryServiceR | API Client Library for 'Wikidata Query Service' |
| WikidataR | Read-Write API Client Library for Wikidata |
| wikifacts | Get Facts and Data from Wikipedia and Wikidata |
| wikilake | Scrape Lake Metadata Tables from Wikipedia |
| WikipediR | A MediaWiki API Wrapper |
| wikiprofiler | 'WikiPathway' Based Data Integration and Visualization |
| wikitaxa | Taxonomic Information from 'Wikipedia' |
| wikiTools | Tools for Wikidata and Wikipedia |
| wikkitidy | Tidy Analysis of Wikipedia |
| wilcoxmed | Computes Values for the 1-Sample Wilcoxon Sign Rank Test for Medians |
| wildcard | Templates for Data Frames |
| wildlifeDI | Calculate Indices of Dynamic Interaction for Wildlife Tracking Data |
| wildmeta | Cluster Wild Bootstrapping for Meta-Analysis |
| wildpoker | Best Hand Analysis for Poker Variants Including Wildcards |
| wilson | Web-Based Interactive Omics Visualization |
| winch | Portable Native and Joint Stack Traces |
| windAC | Area Correction Methods |
| WindCurves | Tool to Fit Wind Turbine Power Curves |
| windex | Analysing Convergent Evolution using the Wheatsheaf Index |
| windows.pls | Segmentation Approaches in Chemometrics |
| windsoraiR | Access the 'Windsor.ai' API |
| wINEQ | Inequality Measures for Weighted Data |
| winfapReader | Interact with Peak Flow Data in the United Kingdom |
| wingen | Continuous Mapping of Genetic Diversity |
| winputall | Variable Input Allocation Among Crops |
| winr | Randomization-Based Covariance Adjustment of Win Statistics |
| WinRatio | Win Ratio for Prioritized Outcomes and 95% Confidence Interval |
| WINS | The R WINS Package |
| wintime | Win Time Methods for Time-to-Event Data in Clinical Trials |
| wiqid | Quick and Dirty Estimates for Wildlife Populations |
| wISAM | Weighted Inbred Strain Association Mapping |
| wishmom | Compute Moments Related to Beta-Wishart and Inverse Beta-Wishart Distributions |
| withdots | Put ... in a Function's Argument List |
| wither | Temporarily Change Project Root |
| withr | Run Code 'With' Temporarily Modified Global State |
| wk | Lightweight Well-Known Geometry Parsing |
| wkb | Convert Between Spatial Objects and Well-Known Binary Geometry |
| wktmo | Converting Weekly Data to Monthly Data |
| wkutils | Utilities for Well-Known Geometry Vectors |
| WLogit | Variable Selection in High-Dimensional Logistic Regression Models using a Whitening Approach |
| WLreg | Regression Analysis Based on Win Loss Endpoints |
| WMAP | Weighted Meta-Analysis with Pseudo-Populations |
| wmm | World Magnetic Model |
| wmwm | Performs Wilcoxon-Mann-Whitney Test with Missing Data |
| wmwpow | Precise and Accurate Power of the Wilcoxon-Mann-Whitney Rank-Sum Test for a Continuous Variable |
| wnl | Minimization Tool for Pharmacokinetic-Pharmacodynamic Data Analysis |
| wNNSel | Weighted Nearest Neighbor Imputation of Missing Values using Selected Variables |
| wnominate | Roll Call Analysis Software |
| WOAkMedoids | Whale Optimization Algorithm for K-Medoids Clustering |
| wodds | Calculates Whisker Odds |
| woe | Computes Weight of Evidence and Information Values |
| woeBinning | Supervised Weight of Evidence Binning of Numeric Variables and Factors |
| womblR | Spatiotemporal Boundary Detection Model for Areal Unit Data |
| WoodburyMatrix | Fast Matrix Operations via the Woodbury Matrix Identity |
| WoodSimulatR | Generate Simulated Sawn Timber Strength Grading Data |
| woodValuationDE | Wood Valuation Germany |
| wooldridge | 115 Data Sets from "Introductory Econometrics: A Modern Approach, 7e" by Jeffrey M. Wooldridge |
| worcs | Workflow for Open Reproducible Code in Science |
| word.alignment | Computing Word Alignment Using IBM Model 1 (and Symmetrization) for a Given Parallel Corpus and Its Evaluation |
| word2vec | Distributed Representations of Words |
| wordcloud | Word Clouds |
| wordcloud2 | Create Word Cloud by 'htmlwidget' |
| wordler | The 'WORDLE' Game |
| WordListsAnalytics | Multiple Data Analysis Tools for Property Listing Tasks |
| wordmap | Feature Extraction and Document Classification with Noisy Labels |
| wordnet | WordNet Interface |
| WordOfMouth | Estimates Economic Variables for Word-of-Mouth-Campaigns |
| wordpiece | R Implementation of Wordpiece Tokenization |
| wordpiece.data | Data for Wordpiece-Style Tokenization |
| WordPools | Word Pools Used in Studies of Learning and Memory |
| wordpredictor | Develop Text Prediction Models Based on N-Grams |
| wordPuzzleR | Word Puzzle Game |
| WordR | Rendering Word Documents with R Inline Code |
| words | List of English Words from the Scrabble Dictionary |
| wordsalad | Provide Tools to Extract and Analyze Word Vectors |
| wordspace | Distributional Semantic Models in R |
| workflowr | A Framework for Reproducible and Collaborative Data Science |
| workflows | Modeling Workflows |
| workflowsets | Create a Collection of 'tidymodels' Workflows |
| workloopR | Analysis of Work Loops and Other Data from Muscle Physiology Experiments |
| worldbank | Client for World Banks's 'Indicators' and 'Poverty and Inequality Platform (PIP)' APIs |
| WorldFlora | Standardize Plant Names According to World Flora Online Taxonomic Backbone |
| worldfootballR | Extract and Clean World Football (Soccer) Data |
| WorldMapR | Worldwide or Coordinates-Based Heat Maps |
| worldmet | Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD) |
| WormTensor | A Clustering Method for Time-Series Whole-Brain Activity Data of 'C. elegans' |
| worrms | World Register of Marine Species (WoRMS) Client |
| worrrd | Generate Wordsearch and Crossword Puzzles |
| wosr | Clients to the 'Web of Science' and 'InCites' APIs |
| WOTPLY | Plot Connectivity Between Cells from Different Time Points |
| wowa | Weighted Ordered Weighted Average |
| woylier | Alternative Tour Frame Interpolation Method |
| wpa | Tools for Analysing and Visualising Viva Insights Data |
| wPerm | Permutation Tests |
| WPKDE | Weighted Piecewise Kernel Density Estimation |
| wpp2008 | World Population Prospects 2008 |
| wpp2010 | World Population Prospects 2010 |
| wpp2012 | World Population Prospects 2012 |
| wpp2015 | World Population Prospects 2015 |
| wpp2017 | World Population Prospects 2017 |
| wpp2019 | World Population Prospects 2019 |
| wppExplorer | Explorer of World Population Prospects |
| wql | Exploring Water Quality Monitoring Data |
| WQM | Wavelet-Based Quantile Mapping for Postprocessing Numerical Weather Predictions |
| wqs | Weighted Quantile Sum Regression |
| wqspt | Permutation Test for Weighted Quantile Sum Regression |
| wqtrends | Assess Water Quality Trends with Generalized Additive Models |
| WR | Win Ratio Analysis of Composite Time-to-Event Outcomes |
| wrangle | A Systematic Data Wrangling Idiom |
| wrappedtools | Useful Wrappers Around Commonly Used Functions |
| wrappr | A Collection of Helper and Wrapper Functions |
| wrapr | Wrap R Tools for Debugging and Parametric Programming |
| wrassp | Interface to the 'ASSP' Library |
| WrensBookshelf | A Collection of Palettes and Some Functions to Help Use Them |
| WRestimates | Sample Size, Power and CI for the Win Ratio |
| wrGraph | Graphics in the Context of Analyzing High-Throughput Data |
| WRI | Wasserstein Regression and Inference |
| WrightMap | IRT Item-Person Map with 'ConQuest' Integration |
| write.snns | Function for exporting data to SNNS pattern files |
| writexl | Export Data Frames to Excel 'xlsx' Format |
| WriteXLS | Cross-Platform Perl Based R Function to Create Excel 2003 (XLS) and Excel 2007 (XLSX) Files |
| wrMisc | Analyze Experimental High-Throughput (Omics) Data |
| wrProteo | Proteomics Data Analysis Functions |
| WRS2 | A Collection of Robust Statistical Methods |
| WRSS | Water Resources System Simulator |
| wrswoR | Weighted Random Sampling without Replacement |
| WRTDStidal | Weighted Regression for Water Quality Evaluation in Tidal Waters |
| wrTopDownFrag | Internal Fragment Identification from Top-Down Mass Spectrometry |
| wru | Who are You? Bayesian Prediction of Racial Category Using Surname, First Name, Middle Name, and Geolocation |
| wsbackfit | Weighted Smooth Backfitting for Structured Models |
| wsjplot | Style Time Series Plots Like the Wall Street Journal |
| wskm | Weighted k-Means Clustering |
| wsprv | Weighted Selection Probability for Rare Variant Analysis |
| wsrf | Weighted Subspace Random Forest for Classification |
| wsyn | Wavelet Approaches to Studies of Synchrony in Ecology and Other Fields |
| wtest | The W-Test for Genetic Interactions Testing |
| wTO | Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network |
| WtTopsis | Weighted Method for Multiple-Criteria Decision Making |
| WufooR | R Wrapper for the 'Wufoo.com' - The Form Building Service |
| wv | Wavelet Variance |
| WVPlots | Common Plots for Analysis |
| WWGbook | Functions and Datasets for WWGbook |
| wwntests | Hypothesis Tests for Functional Time Series |
| wxgenR | A Stochastic Weather Generator with Seasonality |
| wyz.code.metaTesting | Wizardry Code Meta Testing |
| wyz.code.offensiveProgramming | Wizardry Code Offensive Programming |
| wyz.code.rdoc | Wizardry Code Offensive Programming R Documentation |
| wyz.code.testthat | Wizardry Code Offensive Programming Test Generation |
| x.ent | eXtraction of ENTity |
| x12 | Interface to 'X12-ARIMA'/'X13-ARIMA-SEATS' and Structure for Batch Processing of Seasonal Adjustment |
| x13binary | Provide the 'x13ashtml' Seasonal Adjustment Binary |
| x3ptools | Tools for Working with 3D Surface Measurements |
| xadmix | Subsetting and Plotting Optimized for Admixture Data |
| xaringan | Presentation Ninja |
| xaringanExtra | Extras and Extensions for 'xaringan' Slides |
| xaringanthemer | Custom 'xaringan' CSS Themes |
| XBRL | Extraction of Business Financial Information from 'XBRL' Documents |
| Xcertainty | Estimating Lengths and Uncertainty from Photogrammetric Imagery |
| xdcclarge | Estimating a (c)DCC-GARCH Model in Large Dimensions |
| XDNUTS | Discontinuous Hamiltonian Monte Carlo with Varying Trajectory Length |
| xefun | X-Engineering or Supporting Functions |
| xega | Extended Evolutionary and Genetic Algorithms |
| xegaBNF | Compile a Backus-Naur Form Specification into an R Grammar Object |
| xegaDerivationTrees | Generating and Manipulating Derivation Trees |
| xegaDfGene | Gene Operations for Real-Coded Genes |
| xegaGaGene | Binary Gene Operations for Genetic Algorithms |
| xegaGeGene | Grammatical Evolution |
| xegaGpGene | Genetic Operations for Grammar-Based Genetic Programming |
| xegaPermGene | Operations on Permutation Genes |
| xegaPopulation | Genetic Population Level Functions |
| xegaSelectGene | Selection of Genes and Gene Representation Independent Functions |
| xergm.common | Common Infrastructure for Extensions of Exponential Random Graph Models |
| xesreadR | Read and Write XES Files |
| xfun | Supporting Functions for Packages Maintained by 'Yihui Xie' |
| xgb2sql | Convert Trained 'XGBoost' Model to SQL Query |
| xgboost | Extreme Gradient Boosting |
| xgrove | Explanation Groves |
| xgxr | Exploratory Graphics for Pharmacometrics |
| xhaz | Excess Hazard Modelling Considering Inappropriate Mortality Rates |
| XICOR | Association Measurement Through Cross Rank Increments |
| XiMpLe | A Simple XML Tree Parser and Generator |
| xkcd | Plotting ggplot2 Graphics in an XKCD Style |
| xkcdcolors | Color Names from the XKCD Color Survey |
| XKCDdata | Get XKCD Comic Data |
| xlcharts | Create Native 'Excel' Charts and Work with Microsoft 'Excel' Files |
| XLConnect | Excel Connector for R |
| xlcutter | Parse Batches of 'xlsx' Files Based on a Template |
| xlink | Genetic Association Models for X-Chromosome SNPS on Continuous, Binary and Survival Outcomes |
| xLLiM | High Dimensional Locally-Linear Mapping |
| XLS | A Modeling Approach that Optimizes Future Errors in Least Squares |
| xlsx | Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files |
| xlsx2dfs | Read and Write 'Excel' Sheets into and from List of Data Frames |
| xlsxjars | Package required POI jars for the xlsx package |
| xmeta | A Toolbox for Multivariate Meta-Analysis |
| XML | Tools for Parsing and Generating XML Within R and S-Plus |
| xml2 | Parse XML |
| XML2R | Easier XML Data Collection |
| xml2relational | Converting XML Documents into Relational Data Models |
| xmlconvert | Comfortably Converting XML Documents to Dataframes and Vice Versa |
| xmlparsedata | Parse Data of 'R' Code as an 'XML' Tree |
| xmlr | Read, Write and Work with 'XML' Data |
| xmlrpc2 | Implementation of the Remote Procedure Call Protocol ('XML-RPC') |
| xmlwriter | Fast and Elegant XML Generation |
| xmpdf | Edit 'XMP' Metadata and 'PDF' Bookmarks and Documentation Info |
| xmrr | Generate XMR Control Chart Data from Time-Series Data |
| xnet | Two-Step Kernel Ridge Regression for Network Predictions |
| XNomial | Exact Goodness-of-Fit Test for Multinomial Data with Fixed Probabilities |
| xoi | Tools for Analyzing Crossover Interference |
| xopen | Open System Files, 'URLs', Anything |
| xpectr | Generates Expectations for 'testthat' Unit Testing |
| xplain | Providing Interactive Interpretations and Explanations of Statistical Results |
| xplorerr | Tools for Interactive Data Exploration |
| Xplortext | Statistical Analysis of Textual Data |
| xportr | Utilities to Output CDISC SDTM/ADaM XPT Files |
| xpose | Diagnostics for Pharmacometric Models |
| xpose.nlmixr2 | Graphical Diagnostics for Pharmacometric Models: Extension to 'nlmixr2' |
| xpose4 | Diagnostics for Nonlinear Mixed-Effect Models |
| XR | A Structure for Interfaces from R |
| xray | X Ray Vision on your Datasets |
| xrf | eXtreme RuleFit |
| xRing | Identify and Measure Tree Rings on X-Ray Micro-Density Profiles |
| XRJulia | Structured Interface to Julia |
| xrnet | Hierarchical Regularized Regression |
| XRPython | Structured Interface to 'Python' |
| XRSCC | Statistical Quality Control Simulation |
| xslt | Extensible Style-Sheet Language Transformations |
| xsp | The Chi-Square Periodogram |
| xSub | Cross-National Data on Sub-National Violence |
| xtable | Export Tables to LaTeX or HTML |
| xtranat | Network Metrics Based on Random Walks |
| xts | eXtensible Time Series |
| xtsum | Summary Statistics for Panel Data |
| xtune | Regularized Regression with Feature-Specific Penalties Integrating External Information |
| xutils | Utility Functions of Fangzhou Xie |
| xwf | Extrema-Weighted Feature Extraction |
| xxdi | Calculate Expertise Indices |
| xxhashlite | Extremely Fast Hashing of R Objects, Raw Data and Files using 'xxHash' Algorithms |
| xxIRT | Item Response Theory and Computer-Based Testing in R |
| yacca | Yet Another Canonical Correlation Analysis Package |
| yaConsensus | Consensus Clustering of Omic Data |
| yager | Yet Another General Regression Neural Network |
| yahoofinancer | Fetch Data from Yahoo Finance API |
| yaImpute | Nearest Neighbor Observation Imputation and Evaluation Tools |
| YaleToolkit | Data Exploration Tools from Yale University |
| yaml | Methods to Convert R Data to YAML and Back |
| yamlet | Versatile Curation of Table Metadata |
| yamlme | Writing 'YAML' Headers for 'R-Markdown' Documents |
| yardstick | Tidy Characterizations of Model Performance |
| yarrr | A Companion to the e-Book "YaRrr!: The Pirate's Guide to R" |
| yasp | String Functions for Compact R Code |
| yatah | Yet Another TAxonomy Handler |
| YatchewTest | Yatchew (1997), De Chaisemartin & D'Haultfoeuille (2024) Linearity Test |
| YatesAlgo.FactorialExp.SR | Yates' Algorithm in 2^n Factorial Experiment |
| ycevo | Nonparametric Estimation of the Yield Curve Evolution |
| yesno | Ask Yes-No Questions |
| yfR | Downloads and Organizes Financial Data from Yahoo Finance |
| yhat | Interpreting Regression Effects |
| yhatr | R Binder for the Yhat API |
| YieldCurve | Modelling and Estimation of the Yield Curve |
| yll | Compute Expected Years of Life Lost (YLL) and Average YLL |
| ymd | Parse 'YMD' Format Number or String to Date |
| Ymisc | Miscellaneous Functions |
| ymlthis | Write 'YAML' for 'R Markdown', 'bookdown', 'blogdown', and More |
| ympes | Collection of Helper Functions |
| yodel | A General Bayesian Model Averaging Helper |
| yorkr | Analyze Cricket Performances Based on Data from Cricsheet |
| youngSwimmers | Young Swimmers Dataset |
| YPBP | Yang and Prentice Model with Baseline Distribution Modeled by Bernstein Polynomials |
| YPInterimTesting | Interim Monitoring Using Adaptively Weighted Log-Rank Test in Clinical Trials |
| YPmodel | The Short-Term and Long-Term Hazard Ratio Model for Survival Data |
| YPmodelPhreg | The Short-Term and Long-Term Hazard Ratio Model with Proportional Adjustment |
| YPPE | Yang and Prentice Model with Piecewise Exponential Baseline Distribution |
| ypr | Yield Per Recruit |
| ypssc | Yeast-Proteome Secondary-Structure Calculator |
| YRmisc | Y&R Miscellaneous R Functions |
| YTAnalytics | Wrapper for 'YouTube Analytics' API |
| yuima | The YUIMA Project Package for SDEs |
| yuimaGUI | A Graphical User Interface for the 'yuima' Package |
| yulab.utils | Supporting Functions for Packages Maintained by 'YuLab-SMU' |
| yum | Utilities to Extract and Process 'YAML' Fragments |
| yyjsonr | Fast 'JSON', 'NDJSON' and 'GeoJSON' Parser and Generator |
| Z10 | Simple Ecological Statistics from the NEON Network |
| zalpha | Run a Suite of Selection Statistics |
| zCompositions | Treatment of Zeros, Left-Censored and Missing Values in Compositional Data Sets |
| zctaCrosswalk | Crosswalk Between 2020 Census ZIP Code Tabulation Areas (ZCTAs), States and Counties |
| zcurve | An Implementation of Z-Curves |
| zdeskR | Connect to Your 'Zendesk' Data |
| zeallot | Multiple, Unpacking, and Destructuring Assignment |
| ZeBook | Working with Dynamic Models for Agriculture and Environment |
| zebu | Local Association Measures |
| zeitgebr | Analysis of Circadian Behaviours |
| zen4R | Interface to 'Zenodo' REST API |
| zendeskR | Zendesk API Wrapper |
| zendown | Access Files from 'Zenodo' Deposits |
| zenplots | Zigzag Expanded Navigation Plots |
| zenstats | Statistics from 'Zenodo' Deposits |
| zeroEQpart | Zero Order vs (Semi) Partial Correlation Test and CI |
| zerotradeflow | An Implementation for the Gravitational Models of Trade |
| zetadiv | Functions to Compute Compositional Turnover Using Zeta Diversity |
| ZetaSuite | Analyze High-Dimensional High-Throughput Dataset and Quality Control Single-Cell RNA-Seq |
| zfa | Zoom-Focus Algorithm |
| zfit | Fit Models in a Pipe |
| ZIBR | A Zero-Inflated Beta Random Effect Model |
| zic | Bayesian Inference for Zero-Inflated Count Models |
| ZillowR | R Interface to Zillow Real Estate and Mortgage Data API |
| ZIM | Zero-Inflated Models (ZIM) for Count Time Series with Excess Zeros |
| ZINAR1 | Simulates ZINAR(1) Model and Estimates Its Parameters Under Frequentist Approach |
| ZINARp | Simulate INAR/ZINAR(p) Models and Estimate Its Parameters |
| zip | Cross-Platform 'zip' Compression |
| zipangu | Japanese Utility Functions and Data |
| ZIPBayes | Bayesian Methods in the Analysis of Zero-Inflated Poisson Model |
| zipcodeR | Data & Functions for Working with US ZIP Codes |
| ZIPFA | Zero Inflated Poisson Factor Analysis |
| zipfextR | Zipf Extended Distributions |
| zipfR | Statistical Models for Word Frequency Distributions |
| ZIPG | Zero-Inflated Poisson-Gamma Regression |
| zippeR | Working with United States ZIP Code and ZIP Code Tabulation Area Data |
| zipR | Pythonic Zip() for R |
| ZIprop | Permutations Tests and Performance Indicator for Zero-Inflated Proportions Response |
| zipsae | Small Area Estimation with Zero-Inflated Model |
| ZLAvian | Zipf's Law of Abbreviation in Animal Vocalisations |
| zlib | Compression and Decompression |
| zlog | Z(log) Transformation for Laboratory Measurements |
| zmisc | Vector Look-Ups and Safer Sampling |
| zoeppritz | Seismic Reflection and Scattering Coefficients |
| zoib | Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression |
| zoid | Bayesian Zero-and-One Inflated Dirichlet Regression Modelling |
| zoltr | Interface to the 'Zoltar' Forecast Repository API |
| zonebuilder | Create and Explore Geographic Zoning Systems |
| zonohedra | Compute and Plot Zonohedra from Vector Generators |
| zoo | S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations) |
| ZooID | Load, Segment and Classify Zooplankton Images |
| zooimage | Analysis of Numerical Plankton Images |
| zoolog | Zooarchaeological Analysis with Log-Ratios |
| zoom | A Spatial Data Visualization Tool |
| zoomerjoin | Superlatively Fast Fuzzy Joins |
| zoomGroupStats | Analyze Text, Audio, and Video from 'Zoom' Meetings |
| zoomr | Connect to Your 'Zoom' Data |
| ZRA | Dynamic Plots for Time Series Forecasting |
| zscorer | Child Anthropometry z-Score Calculator |
| Zseq | Integer Sequence Generator |
| ztable | Zebra-Striped Tables in LaTeX and HTML Formats |
| ztpln | Zero-Truncated Poisson Lognormal Distribution |
| zTree | Functions to Import Data from 'z-Tree' into R |
| ztype | Run a Ztype Game Loaded with R Functions |
| ZVCV | Zero-Variance Control Variates |
| zyp | Zhang + Yue-Pilon Trends Package |
| zzlite | Lite Wrapper for the 'Zamzar File Conversion' API |