ade4: Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences

Tools for multivariate data analysis. Several methods are provided for the analysis (i.e., ordination) of one-table (e.g., principal component analysis, correspondence analysis), two-table (e.g., coinertia analysis, redundancy analysis), three-table (e.g., RLQ analysis) and K-table (e.g., STATIS, multiple coinertia analysis). The philosophy of the package is described in Dray and Dufour (2007) <doi:10.18637/jss.v022.i04>.

Version: 1.7-23
Depends: R (≥ 3.5.0)
Imports: graphics, grDevices, methods, stats, utils, MASS, pixmap, sp, Rcpp
LinkingTo: Rcpp, RcppArmadillo
Suggests: ade4TkGUI, adegraphics, adephylo, adespatial, ape, CircStats, deldir, lattice, spdep, splancs, waveslim, progress, foreach, parallel, doParallel, iterators, knitr, rmarkdown
Published: 2025-02-14
DOI: 10.32614/CRAN.package.ade4
Author: Stéphane Dray ORCID iD [aut], Anne-Béatrice Dufour ORCID iD [aut], Jean Thioulouse ORCID iD [aut], Daniel Chessel [ant], Thibaut Jombart [ctb], Sandrine Pavoine [ctb], Jean R. Lobry [ctb], Sébastien Ollier [ctb], Daniel Borcard [ctb], Pierre Legendre [ctb], Stéphanie Bougeard [ctb], Aurélie Siberchicot ORCID iD [ctb, cre]
Maintainer: Aurélie Siberchicot <aurelie.siberchicot at univ-lyon1.fr>
BugReports: https://github.com/adeverse/ade4/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://adeverse.github.io/ade4/, http://pbil.univ-lyon1.fr/ADE-4/
NeedsCompilation: yes
Citation: ade4 citation info
Materials: NEWS ChangeLog
In views: Environmetrics, MissingData, Psychometrics, Spatial
CRAN checks: ade4 results

Documentation:

Reference manual: ade4.pdf
Vignettes: FAQ (source, R code)

Downloads:

Package source: ade4_1.7-23.tar.gz
Windows binaries: r-devel: ade4_1.7-23.zip, r-release: ade4_1.7-23.zip, r-oldrel: ade4_1.7-22.zip
macOS binaries: r-devel (arm64): ade4_1.7-23.tgz, r-release (arm64): ade4_1.7-23.tgz, r-oldrel (arm64): ade4_1.7-23.tgz, r-devel (x86_64): ade4_1.7-23.tgz, r-release (x86_64): ade4_1.7-23.tgz, r-oldrel (x86_64): ade4_1.7-23.tgz
Old sources: ade4 archive

Reverse dependencies:

Reverse depends: ade4TkGUI, adegenet, adehabitatHR, adehabitatHS, adehabitatLT, adephylo, Autoplotprotein, cati, covRNA, FactoClass, FD, genoPlotR, omicade4, packMBPLSDA, plotprotein, treespace
Reverse imports: adductomicsR, adegraphics, adespatial, adiv, ads, BalanceCheck, bikm1, CAESAR.Suite, clusterSim, dispRity, DrBats, ecospat, funspace, gTests, hierfstat, hillR, iBBiG, kissDE, Laterality, made4, memgene, metaprotr, mFD, MorphoTools2, motifStack, multiblock, PBD, pctax, pez, phylobase, phyloseq, PopGenReport, poppr, revtools, rgTest, RVAideMemoire, SCGLR, Select, seqinr, SPARTAAS, STEPCAM, symbolicDA, Thresher, virtualspecies
Reverse suggests: berryFunctions, bioregion, brainGraph, corral, divent, ecostats, entropart, epimdr, epimdr2, explor, factoextra, funrar, GDAtools, glmmTMB, gSeg, gTestsMulti, Guerry, GUniFrac, LearnPCA, mia, MiSPU, OGI, polysat, ProcMod, seqhandbook, wallace

Linking:

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