Last updated on 2025-08-02 09:48:29 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.12 | 247.84 | 261.96 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.82 | 217.38 | 228.20 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 224.00 | 245.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 159.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 155.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 243.00 | 267.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/110s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.440, system: 0.036, elapsed: 1.697 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.798, system: 0.121, elapsed: 11.055 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.256 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.636, system: 0.184, elapsed: 4.933 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.251 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.759, system: 0.376, elapsed: 18.868 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.473, system: 0.032, elapsed: 2.179 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.839, system: 0.071, elapsed: 12.888 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.405 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.670, system: 0.156, elapsed: 6.795 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.262 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.859, system: 0.291, elapsed: 23.476 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.479, system: 0.030, elapsed: 2.281 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.934, system: 0.064, elapsed: 14.730 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.313 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.600, system: 0.170, elapsed: 6.174 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.310 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.154, system: 0.208, elapsed: 1.300 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.130, system: 0.510, elapsed: 26.077 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.454, system: 0.030, elapsed: 1.904 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.876, system: 0.081, elapsed: 12.343 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.307 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.710, system: 0.180, elapsed: 5.321 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.219 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.157, system: 0.458, elapsed: 14.088 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.185, system: 0.797, elapsed: 35.153 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/102s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.044, elapsed: 1.957 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.748, system: 0.071, elapsed: 11.669 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.245 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.458, system: 0.175, elapsed: 5.140 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.241 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.591, system: 0.328, elapsed: 19.988 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.459, system: 0.027, elapsed: 2.449 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.867, system: 0.061, elapsed: 14.546 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.535, system: 0.159, elapsed: 5.147 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.240 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.726, system: 0.287, elapsed: 23.485 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.513, system: 0.037, elapsed: 1.829 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.888, system: 0.062, elapsed: 12.523 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.418, system: 0.143, elapsed: 4.699 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.190 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.050, system: 0.203, elapsed: 0.864 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.835, system: 0.492, elapsed: 21.218 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.462, system: 0.027, elapsed: 1.831 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.695, system: 0.052, elapsed: 9.557 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.505, system: 0.178, elapsed: 4.703 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.006, elapsed: 0.243 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.991, system: 0.575, elapsed: 13.985 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.629, system: 0.881, elapsed: 31.533 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64