Last updated on 2025-08-02 09:48:21 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.0.1 | 49.52 | 707.56 | 757.08 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.0.1 | 34.48 | 440.94 | 475.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.0.1 | 1280.85 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.0.1 | 1223.28 | OK | |||
| r-devel-windows-x86_64 | 1.1.0.1 | 44.00 | 558.00 | 602.00 | OK | |
| r-patched-linux-x86_64 | 1.1.0.1 | 51.81 | 662.46 | 714.27 | OK | |
| r-release-linux-x86_64 | 1.1.0.1 | 46.70 | 656.65 | 703.35 | OK | |
| r-release-macos-arm64 | 1.1.0.1 | 181.00 | OK | |||
| r-release-macos-x86_64 | 1.1.0.1 | 373.00 | OK | |||
| r-release-windows-x86_64 | 1.1.0.1 | 45.00 | 559.00 | 604.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.1.0.1 | 200.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.0.1 | 326.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1.0.1 | 67.00 | 867.00 | 934.00 | OK |
Version: 1.1.0.1
Check: tests
Result: ERROR
Running 'testthat.R' [219s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(caretSDM)
>
> test_check("caretSDM")
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
Linking to GEOS 3.13.1, GDAL 3.11.0, PROJ 9.6.0; sf_use_s2() is TRUE
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
s1_names s2_names
1 bio1 wc2.1_10m_bio_1
2 bio12 wc2.1_10m_bio_12
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
Cell_ids identified, removing duplicated cell_id.
Testing country capitals
Removed 0 records.
Testing country centroids
Removed 0 records.
Testing duplicates
Removed 0 records.
Testing equal lat/lon
Removed 0 records.
Testing biodiversity institutions
Removed 1 records.
Testing coordinate validity
Removed 0 records.
Predictors identified, procceding with grid filter (removing NA and duplicated data).
Testing country capitals
Removed 0 records.
Testing country centroids
Removed 0 records.
Testing duplicates
Removed 1 records.
Testing equal lat/lon
Removed 0 records.
Testing biodiversity institutions
Removed 0 records.
Testing coordinate validity
Removed 0 records.
Predictors identified, procceding with grid filter (removing NA and duplicated data).
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
Cell_ids identified, removing duplicated cell_id.
Testing country capitals
Removed 0 records.
Testing country centroids
Removed 0 records.
Testing duplicates
Removed 0 records.
Testing equal lat/lon
Removed 0 records.
Testing biodiversity institutions
Removed 1 records.
Testing coordinate validity
Removed 0 records.
Predictors identified, procceding with grid filter (removing NA and duplicated data).
Testing country capitals
Removed 0 records.
Testing country centroids
Removed 0 records.
Testing duplicates
Removed 2 records.
Testing equal lat/lon
Removed 0 records.
Testing biodiversity institutions
Removed 0 records.
Testing coordinate validity
Removed 0 records.
Predictors identified, procceding with grid filter (removing NA and duplicated data).
Testing country capitals
Removed 0 records.
Testing country centroids
Removed 0 records.
Testing duplicates
Removed 31 records.
Testing equal lat/lon
Removed 0 records.
Testing biodiversity institutions
Removed 5 records.
Testing coordinate validity
Removed 0 records.
Testing country capitals
Removed 0 records.
Testing country centroids
Removed 0 records.
Testing duplicates
Removed 31 records.
Testing equal lat/lon
Removed 0 records.
Testing biodiversity institutions
Removed 5 records.
Testing coordinate validity
Removed 0 records.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
Cell_ids identified, removing duplicated cell_id.
Testing country capitals
Removed 0 records.
Testing country centroids
Removed 0 records.
Testing duplicates
Removed 0 records.
Testing equal lat/lon
Removed 0 records.
Testing biodiversity institutions
Removed 1 records.
Testing coordinate validity
Removed 0 records.
Predictors identified, procceding with grid filter (removing NA and duplicated data).
Testing country capitals
Removed 0 records.
Testing country centroids
Removed 0 records.
Testing duplicates
Removed 0 records.
Testing equal lat/lon
Removed 0 records.
Testing biodiversity institutions
Removed 1 records.
Testing coordinate validity
Removed 0 records.
Predictors identified, procceding with grid filter (removing NA and duplicated data).
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
Loading required package: ggplot2
Loading required package: lattice
Attaching package: 'caret'
The following object is masked from 'package:caretSDM':
predictors
[1] "Projecting: 1/1"
[1] "Ensembling..."
[1] "current"
[1] "Araucaria angustifolia"
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
[1] "Projecting: 1/1"
[1] "Ensembling..."
[1] "current"
[1] "Araucaria angustifolia"
[1] "Projecting: 1/1"
[1] "Ensembling..."
[1] "current"
[1] "Araucaria angustifolia"
[1] "Projecting: 1/1"
[1] "Ensembling..."
[1] "current"
[1] "Araucaria angustifolia"
[1] "Projecting: 1/1"
[1] "Ensembling..."
[1] "current"
[1] "Araucaria angustifolia"
[1] "Projecting: 1/1"
[1] "Projecting: 1/2"
[1] "Projecting: 2/2"
[1] "Ensembling..."
[1] "current"
[1] "Araucaria angustifolia"
[1] "teste"
[1] "Araucaria angustifolia"
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
trying to read file: test.gpkg
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
[1] "Projecting: 1/1"
[1] "Projecting: 1/1"
[1] "Ensembling..."
[1] "current"
[1] "Araucaria angustifolia"
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
ℹ Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
! Making grid over the study area is an expensive task. Please, be patient!
i Using GDAL to make the grid and resample the variables.
[ FAIL 1 | WARN 0 | SKIP 31 | PASS 574 ]
══ Skipped tests (31) ══════════════════════════════════════════════════════════
• On CRAN (31): 'test-add_predictors.R:391:3', 'test-add_predictors.R:399:2',
'test-add_predictors.R:419:2', 'test-add_predictors.R:432:2',
'test-input_sdm.R:11:3', 'test-names.R:37:3', 'test-occurrences_sdm.R:335:3',
'test-pca_predictors.R:15:3', 'test-pca_predictors.R:32:3',
'test-pdp_sdm.R:2:3', 'test-predict_sdm.R:40:3', 'test-predict_sdm.R:76:3',
'test-predict_sdm.R:110:3', 'test-sdm_area.R:43:3', 'test-sdm_area.R:222:3',
'test-sdm_area.R:228:3', 'test-sdm_area.R:235:3', 'test-sdm_area.R:273:3',
'test-sdm_area.R:295:3', 'test-sdm_area.R:321:3', 'test-sdm_area.R:349:3',
'test-sdm_area.R:356:3', 'test-sdm_area.R:362:3', 'test-sdm_area.R:369:3',
'test-sdm_area.R:377:3', 'test-sdm_area.R:383:3', 'test-train_sdm.R:33:3',
'test-train_sdm.R:50:3', 'test-train_sdm.R:67:3', 'test-train_sdm.R:82:3',
'test-train_sdm.R:98:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-data_clean.R:4:3'): data_clean - normal path with sdm_area ───
`... <- NULL` did not throw the expected warning.
[ FAIL 1 | WARN 0 | SKIP 31 | PASS 574 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64