Implements various tests, visualizations, and metrics
for diagnosing convergence of MCMC chains in phylogenetics. It implements
and automates many of the functions of the AWTY package in the R
environment, as well as a host of other functions. Warren, Geneva, and Lanfear (2017), <doi:10.1093/molbev/msw279>.
Version: |
1.0.3 |
Depends: |
R (≥ 3.3.0), ape, ggplot2 |
Imports: |
reshape2, phangorn, coda, viridis, grid, plyr, ggdendro, GGally, parallel, TreeDist |
Suggests: |
knitr, testthat, markdown, rmarkdown, stringi |
Published: |
2025-03-27 |
DOI: |
10.32614/CRAN.package.rwty |
Author: |
Dan Warren [aut, cre],
Anthony Geneva [aut],
Rob Lanfear [aut],
Luke Harmon [ctb],
April Wright [ctb],
Diego Mallo [ctb],
Klaus Schliep [ctb],
Kelly Luke [ctb],
Kendall Michelle [ctb],
Smith Martin [ctb] |
Maintainer: |
Dan Warren <dan.l.warren at gmail.com> |
License: |
GPL-2 |
NeedsCompilation: |
no |
Citation: |
rwty citation info |
Materials: |
README |
CRAN checks: |
rwty results |