Last updated on 2025-07-12 09:49:23 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.95 | 245.76 | 258.71 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.42 | 225.07 | 235.49 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.93 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.57 | 296.00 | 310.57 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 164.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 186.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 169.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/112s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.039, elapsed: 2.032 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.075, system: 0.086, elapsed: 12.354 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.812, system: 0.196, elapsed: 5.841 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.253 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.255, system: 0.365, elapsed: 21.571 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.474, system: 0.033, elapsed: 2.286 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.104, system: 0.160, elapsed: 13.423 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.010, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.762, system: 0.212, elapsed: 6.013 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.006, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.231, system: 0.444, elapsed: 23.138 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.050, elapsed: 2.517 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.019, system: 0.090, elapsed: 12.339 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.625, system: 0.173, elapsed: 4.990 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.233 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.134, system: 0.215, elapsed: 1.035 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.301, system: 0.568, elapsed: 22.364 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.036, elapsed: 2.134 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.094, system: 0.134, elapsed: 11.921 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.233 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.662, system: 0.179, elapsed: 4.581 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.223 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.356, system: 0.471, elapsed: 17.616 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.593, system: 0.864, elapsed: 37.652 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.537, system: 0.044, elapsed: 2.604 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.928, system: 0.070, elapsed: 13.472 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.014, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.547, system: 0.183, elapsed: 5.977 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.264 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.909, system: 0.332, elapsed: 23.710 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.029, elapsed: 2.416 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.920, system: 0.048, elapsed: 14.061 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.485, system: 0.163, elapsed: 5.201 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.235 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.763, system: 0.272, elapsed: 23.000 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.551, system: 0.028, elapsed: 2.353 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.851, system: 0.052, elapsed: 12.045 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.010, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.469, system: 0.151, elapsed: 4.929 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.233 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.040, system: 0.263, elapsed: 0.980 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.918, system: 0.533, elapsed: 21.672 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.499, system: 0.047, elapsed: 2.339 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.022, system: 0.188, elapsed: 13.225 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.015, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.600, system: 0.215, elapsed: 5.617 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.010, elapsed: 0.247 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.046, system: 0.480, elapsed: 14.994 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.154, system: 0.988, elapsed: 37.624 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64