CRAN Package Check Results for Maintainer ‘Karl Broman <broman at wisc.edu>’

Last updated on 2025-10-30 08:51:40 CET.

Package	ERROR	NOTE	OK
aRxiv	1		12
broman			13
chromer			13
lineup			13
lineup2			13
mbmixture			13
mmconvert			13
negenes			13
qtl		3	10
qtl2		3	10
qtl2convert			13
qtl2fst			13
qtlbook			13
qtlcharts			13
regress			13
simcross			13
xoi			13

Package aRxiv

Current CRAN status: ERROR: 1, OK: 12

Version: 0.12
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘aRxiv.Rmd’ using rmarkdown Error in curl::curl_fetch_memory(url, handle = handle) : Timeout was reached [export.arxiv.org]: Operation timed out after 1020 milliseconds with 0 bytes received Quitting from aRxiv.Rmd:205-209 [search_cats] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! 1: Opening and ending tag mismatch: meta line 4 and head 2: Opening and ending tag mismatch: head line 3 and html --- Backtrace: ▆ 1. ├─aRxiv::arxiv_count("cat:stat*") 2. │ └─aRxiv:::result2list(search_result) 3. │ └─XML::xmlParse(httr::content(searchresult, "text"), asText = TRUE) 4. └─XML (local) `<fn>`(`<chr>`) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'aRxiv.Rmd' failed with diagnostics: 1: Opening and ending tag mismatch: meta line 4 and head 2: Opening and ending tag mismatch: head line 3 and html --- failed re-building ‘aRxiv.Rmd’ SUMMARY: processing the following file failed: ‘aRxiv.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Package broman

Current CRAN status: OK: 13

Package chromer

Current CRAN status: OK: 13

Package lineup

Current CRAN status: OK: 13

Package lineup2

Current CRAN status: OK: 13

Package mbmixture

Current CRAN status: OK: 13

Package mmconvert

Current CRAN status: OK: 13

Package negenes

Current CRAN status: OK: 13

Package qtl

Current CRAN status: NOTE: 3, OK: 10

Version: 1.70
Check: installed package size
Result: NOTE installed size is 11.5Mb sub-directories of 1Mb or more: R 2.1Mb contrib 3.7Mb doc 3.0Mb libs 1.3Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package qtl2

Current CRAN status: NOTE: 3, OK: 10

Version: 0.38
Check: installed package size
Result: NOTE installed size is 48.4Mb sub-directories of 1Mb or more: extdata 3.3Mb libs 43.7Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package qtl2convert

Current CRAN status: OK: 13

Package qtl2fst

Current CRAN status: OK: 13

Package qtlbook

Current CRAN status: OK: 13

Package qtlcharts

Current CRAN status: OK: 13

Package regress

Current CRAN status: OK: 13

Package simcross

Current CRAN status: OK: 13

Package xoi

Current CRAN status: OK: 13