Amber R

R package for accessing OBiBa/Amber web services:

• list users and groups
• list studies, forms, form revisions, case report forms and interview designs
• extract case report and interview records with full data dictionary

Installation

Requires R >3.x.

# Install from source code repository
remotes::install_github("obiba/amberr")

Usage

Steps:

• open connection to Amber server
• extract and process documents
• close connection with Amber server

Examples:

• user and group queries
• study and form queries
• case report form and record queries and save them in Opal for further analysis
• interview designs, campaigns, participants and record queries and save them in Opal for further analysis