CRAN Package Check Results for Package spant

Last updated on 2025-03-01 09:52:09 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.2.0 26.73 254.59 281.32 OK
r-devel-linux-x86_64-debian-gcc 3.2.0 16.64 176.46 193.10 OK
r-devel-linux-x86_64-fedora-clang 3.2.0 445.44 ERROR
r-devel-linux-x86_64-fedora-gcc 3.2.0 464.86 ERROR
r-devel-macos-arm64 3.2.0 116.00 OK
r-devel-macos-x86_64 3.2.0 381.00 OK
r-devel-windows-x86_64 3.2.0 31.00 299.00 330.00 OK
r-patched-linux-x86_64 3.2.0 29.89 245.70 275.59 OK
r-release-linux-x86_64 3.2.0 24.68 252.13 276.81 OK
r-release-macos-arm64 3.2.0 137.00 OK
r-release-macos-x86_64 3.2.0 354.00 OK
r-release-windows-x86_64 3.2.0 32.00 295.00 327.00 OK
r-oldrel-macos-arm64 3.2.0 84.00 ERROR
r-oldrel-macos-x86_64 3.2.0 276.00 OK
r-oldrel-windows-x86_64 3.2.0 37.00 356.00 393.00 OK

Check Details

Version: 3.2.0
Check: tests
Result: ERROR Running ‘testthat.R’ [49s/69s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(spant) spant 3.2.0 Attaching package: 'spant' The following object is masked from 'package:stats': sd > > test_check("spant") [ FAIL 1 | WARN 0 | SKIP 0 | PASS 16 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_fitting.R:57:3'): Test ABfit coarse-fitting steps only ─────── `fit_res` has changed from known value recorded in 'abfit_res_coarse.rds'. Component "res_tab": Component "res.niter": Mean relative difference: 0.6688525 Backtrace: ▆ 1. └─testthat::expect_equal_to_reference(...) at test_fitting.R:57:3 2. └─testthat::expect_known_value(..., update = update) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 16 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.2.0
Check: tests
Result: ERROR Running ‘testthat.R’ [55s/96s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(spant) spant 3.2.0 Attaching package: 'spant' The following object is masked from 'package:stats': sd > > test_check("spant") [ FAIL 1 | WARN 0 | SKIP 0 | PASS 16 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_fitting.R:57:3'): Test ABfit coarse-fitting steps only ─────── `fit_res` has changed from known value recorded in 'abfit_res_coarse.rds'. Component "res_tab": Component "res.niter": Mean relative difference: 0.6688525 Backtrace: ▆ 1. └─testthat::expect_equal_to_reference(...) at test_fitting.R:57:3 2. └─testthat::expect_known_value(..., update = update) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 16 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 3.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘abfit-baseline-opts.Rmd’ using rmarkdown Quitting from lines 11-19 [unnamed-chunk-1] (abfit-baseline-opts.Rmd) Error: processing vignette 'abfit-baseline-opts.Rmd' failed with diagnostics: package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called 'systemfonts' --- failed re-building ‘abfit-baseline-opts.Rmd’ --- re-building ‘spant-basis-simulation.Rmd’ using rmarkdown Quitting from lines 11-19 [unnamed-chunk-1] (spant-basis-simulation.Rmd) Error: processing vignette 'spant-basis-simulation.Rmd' failed with diagnostics: package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called 'systemfonts' --- failed re-building ‘spant-basis-simulation.Rmd’ --- re-building ‘spant-intro.Rmd’ using rmarkdown Quitting from lines 11-19 [unnamed-chunk-1] (spant-intro.Rmd) Error: processing vignette 'spant-intro.Rmd' failed with diagnostics: package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called 'systemfonts' --- failed re-building ‘spant-intro.Rmd’ --- re-building ‘spant-metabolite-simulation.Rmd’ using rmarkdown Quitting from lines 11-19 [unnamed-chunk-1] (spant-metabolite-simulation.Rmd) Error: processing vignette 'spant-metabolite-simulation.Rmd' failed with diagnostics: package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called 'systemfonts' --- failed re-building ‘spant-metabolite-simulation.Rmd’ --- re-building ‘spant-preprocessing.Rmd’ using rmarkdown Quitting from lines 11-19 [unnamed-chunk-1] (spant-preprocessing.Rmd) Error: processing vignette 'spant-preprocessing.Rmd' failed with diagnostics: package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called 'systemfonts' --- failed re-building ‘spant-preprocessing.Rmd’ SUMMARY: processing the following files failed: ‘abfit-baseline-opts.Rmd’ ‘spant-basis-simulation.Rmd’ ‘spant-intro.Rmd’ ‘spant-metabolite-simulation.Rmd’ ‘spant-preprocessing.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-macos-arm64