Last updated on 2026-04-24 09:52:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.18 | 301.85 | 317.03 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.48 | 238.83 | 250.31 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 300.78 | 323.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 341.93 | 373.93 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 188.00 | 210.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 345.71 | 360.26 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 334.90 | 349.10 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 13.00 | 481.00 | 494.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 628.00 | 639.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 243.00 | 269.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [117s/407s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.893, system: 0.147, elapsed: 6.236 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.154, system: 0.375, elapsed: 28.591 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.040, elapsed: 1.288 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.573, system: 2.105, elapsed: 102.444 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.020, elapsed: 0.428 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.789, system: 3.288, elapsed: 142.466 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.828, system: 0.112, elapsed: 4.097 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.194, system: 0.290, elapsed: 15.966 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.244, system: 0.025, elapsed: 0.587 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.523, system: 1.082, elapsed: 47.456 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.010, elapsed: 0.279 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.618, system: 1.638, elapsed: 69.770 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.789, system: 0.114, elapsed: 3.272 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.070, system: 0.297, elapsed: 22.799 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.233, system: 0.030, elapsed: 1.001 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.401, system: 1.109, elapsed: 50.771 seconds]
Computing values for grid cells...
... done. [user: 0.200, system: 0.020, elapsed: 0.355 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.444, system: 0.425, elapsed: 1.917 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.973, system: 2.399, elapsed: 82.182 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.777, system: 0.098, elapsed: 4.116 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.940, system: 0.251, elapsed: 29.390 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.035, elapsed: 1.212 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.557, system: 1.079, elapsed: 47.017 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.010, elapsed: 0.230 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 15.327, system: 1.354, elapsed: 15.941 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 35.837, system: 3.249, elapsed: 100.013 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [114s/534s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.867, system: 0.097, elapsed: 5.593 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.368, system: 0.453, elapsed: 34.376 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.035, elapsed: 1.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.995, system: 3.658, elapsed: 180.314 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.017, elapsed: 0.402 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.384, system: 4.777, elapsed: 225.402 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.717, system: 0.080, elapsed: 4.096 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.893, system: 0.243, elapsed: 20.250 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.021, elapsed: 0.864 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.079, system: 1.798, elapsed: 114.861 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.017, elapsed: 0.361 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.727, system: 2.218, elapsed: 141.635 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.051, system: 0.157, elapsed: 3.947 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.111, system: 0.316, elapsed: 17.468 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.025, elapsed: 1.040 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.997, system: 1.152, elapsed: 48.881 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.009, elapsed: 0.195 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.273, system: 0.294, elapsed: 1.321 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.680, system: 2.172, elapsed: 74.287 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.054, elapsed: 2.641 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.902, system: 0.236, elapsed: 16.359 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.238, system: 0.032, elapsed: 0.394 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.485, system: 1.087, elapsed: 30.632 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.015, elapsed: 0.276 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.278, system: 0.921, elapsed: 26.106 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.492, system: 2.585, elapsed: 77.863 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64