Last updated on 2025-09-13 09:49:29 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.70 | 260.40 | 274.10 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.31 | 264.50 | 275.81 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 336.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.24 | 305.48 | 319.72 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 190.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 187.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/131s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.498, system: 0.037, elapsed: 2.588 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.000, system: 0.082, elapsed: 14.975 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.775, system: 0.183, elapsed: 7.203 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.179, system: 0.339, elapsed: 26.353 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.481, system: 0.028, elapsed: 2.486 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.991, system: 0.068, elapsed: 14.701 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.010, elapsed: 0.250 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.770, system: 0.168, elapsed: 6.108 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.263 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.145, system: 0.296, elapsed: 24.634 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.601, system: 0.046, elapsed: 2.597 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.023, system: 0.095, elapsed: 15.620 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.294 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.775, system: 0.178, elapsed: 6.656 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.461 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.142, system: 0.201, elapsed: 1.843 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.518, system: 0.563, elapsed: 28.680 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.457, system: 0.029, elapsed: 3.570 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.075, system: 0.083, elapsed: 14.269 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.818, system: 0.180, elapsed: 6.254 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.006, elapsed: 0.306 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.404, system: 0.461, elapsed: 16.482 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.774, system: 0.798, elapsed: 42.388 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.034, elapsed: 2.540 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.894, system: 0.068, elapsed: 14.004 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.013, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.592, system: 0.180, elapsed: 6.391 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.855, system: 0.315, elapsed: 24.329 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.537, system: 0.034, elapsed: 2.757 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.961, system: 0.060, elapsed: 13.575 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.654, system: 0.159, elapsed: 6.409 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.054, system: 0.293, elapsed: 24.408 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.549, system: 0.032, elapsed: 2.748 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.017, system: 0.095, elapsed: 14.438 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.010, elapsed: 0.258 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.497, system: 0.170, elapsed: 4.625 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.009, elapsed: 0.244 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.044, system: 0.228, elapsed: 0.892 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.111, system: 0.572, elapsed: 24.187 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.033, elapsed: 2.076 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.002, system: 0.107, elapsed: 12.895 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.551, system: 0.162, elapsed: 5.860 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.324 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.001, system: 0.433, elapsed: 21.597 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.048, system: 0.779, elapsed: 44.085 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64