Changepoint Additive Models for Time Series Omics Data

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Documentation for package ‘cpam’ version 0.1.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

compute_p_values	Compute p-values for each target ID
cpam	The cpam class
cpam-class	The cpam class
estimate_changepoint	Use model selection to estimate changepoints
plot_cluster	Plot clustered targets
plot_cpam	Plot fitted changepoint additive models
prepare_cpam	Prepare a cpam object
results	Create a results table from a cpam object
select_shape	Use model selection to select a shape for each target
ts_filter	Removes lowly expressed genes
visualise	Launches a Shiny app to visualise the data and fitted models of a cpam object
visualize	Launches a Shiny app to visualise the data and fitted models of a cpam object