adhocGene.DE.Gene.10x	adhocGene.DE.Gene.10x
adhocGene.DE.PSI.10x	adhocGene.DE.PSI.10x
adhocGene.PlotDEValues.10x	adhocGene.PlotDEValues.10x
adhocGene.PlotSJPosition.10x	adhocGene.PlotSJPosition.10x
adhocGene.TabulateExpression.Gene.10x	adhocGene.TabulateExpression.Gene.10x
adhocGene.TabulateExpression.PSI.10x	adhocGene.TabulateExpression.PSI.10x
AnnotateGenes.10x	AnnotateGenes.10x
AnnotateSJ.10x	AnnotateSJ.10x
AnnoVolcanoPlot	AnnoVolcanoPlot
AssignModality	AssignModality
BioPathways	BioPathways
BioPathways.10x	BioPathways.10x
BioPathways.Plot	BioPathways.Plot
BioPathways.Plot.10x	BioPathways.Plot.10x
CheckAlignment	CheckAlignment
CheckAlignment.10x	CheckAlignment.10x
CheckAlignment.Exp	CheckAlignment.Exp
CheckAlignment.PSI	CheckAlignment.PSI
CheckAlignment.PSI.Exp	CheckAlignment.PSI.Exp
CheckAlignment.SJ	CheckAlignment.SJ
CompareExpr	CompareExpr
CompareValues	CompareValues
CompareValues.Exp	CompareValues.Exp
CompareValues.Exp.Spliced	CompareValues.Exp.Spliced
CompareValues.Genes.10x	CompareValues.Genes.10x
CompareValues.PSI	CompareValues.PSI
CompareValues.SJ.10x	CompareValues.SJ.10x
ComputePSI	ComputePSI
ComputePSI.A3SS	ComputePSI.A3SS
ComputePSI.A5SS	ComputePSI.A5SS
ComputePSI.AFE	ComputePSI.AFE
ComputePSI.ALE	ComputePSI.ALE
ComputePSI.MXE	ComputePSI.MXE
ComputePSI.RI	ComputePSI.RI
ComputePSI.SE	ComputePSI.SE
CountEvents	CountEvents
CreateMarvelObject	CreateMarvelObject
CreateMarvelObject.10x	CreateMarvelObject.10x
DetectEvents	DetectEvents
DetectEvents.AFE	DetectEvents.AFE
DetectEvents.AFE.NegStrand	DetectEvents.AFE.NegStrand
DetectEvents.AFE.PosStrand	DetectEvents.AFE.PosStrand
DetectEvents.ALE	DetectEvents.ALE
DetectEvents.ALE.NegStrand	DetectEvents.ALE.NegStrand
DetectEvents.ALE.PosStrand	DetectEvents.ALE.PosStrand
FilterGenes.10x	FilterGenes.10x
FindPTC	FindPTC
FindPTC.A3SS.NegStrand	FindPTC.A3SS.NegStrand
FindPTC.A3SS.PosStrand	FindPTC.A3SS.PosStrand
FindPTC.A5SS.NegStrand	FindPTC.A5SS.NegStrand
FindPTC.A5SS.PosStrand	FindPTC.A5SS.PosStrand
FindPTC.RI.NegStrand	FindPTC.RI.NegStrand
FindPTC.RI.PosStrand	FindPTC.RI.PosStrand
FindPTC.SE.NegStrand	FindPTC.SE.NegStrand
FindPTC.SE.PosStrand	FindPTC.SE.PosStrand
IsoSwitch	IsoSwitch
IsoSwitch.10x	IsoSwitch.10x
IsoSwitch.PlotExpr	IsoSwitch.PlotExpr
ModalityChange	ModalityChange
ParseGTF	ParseGTF
PctASE	PctASE
PlotDEValues	PlotDEValues
PlotDEValues.Exp.Global	PlotDEValues.Exp.Global
PlotDEValues.Exp.Spliced	PlotDEValues.Exp.Spliced
PlotDEValues.Genes.10x	PlotDEValues.Genes.10x
PlotDEValues.PSI.Distance	PlotDEValues.PSI.Distance
PlotDEValues.PSI.Mean	PlotDEValues.PSI.Mean
PlotDEValues.PSI.Mean.g2vsg1	PlotDEValues.PSI.Mean.g2vsg1
PlotDEValues.SJ.10x	PlotDEValues.SJ.10x
PlotPctExprCells.Genes.10x	PlotPctExprCells.Genes.10x
PlotPctExprCells.SJ.10x	PlotPctExprCells.SJ.10x
PlotValues	PlotValues
PlotValues.Exp	PlotValues.Exp
PlotValues.PCA.CellGroup.10x	PlotValues.PCA.CellGroup.10x
PlotValues.PCA.Gene.10x	PlotValues.PCA.Gene.10x
PlotValues.PCA.PSI.10x	PlotValues.PCA.PSI.10x
PlotValues.PSI	PlotValues.PSI
PropModality	PropModality
PropModality.Bar	PropModality.Bar
PropModality.Doughnut	PropModality.Doughnut
PropPTC	PropPTC
RunPCA	RunPCA
RunPCA.Exp	RunPCA.Exp
RunPCA.PSI	RunPCA.PSI
SubsetCrypticA3SS	SubsetCrypticA3SS
SubsetSamples	SubsetSamples
TransformExpValues	TransformExpValues
ValidateSJ.10x	ValidateSJ.10x
