$,AcousticEvent-method	PAMpal.accessors
$,AcousticStudy-method	PAMpal.accessors
$<-,AcousticEvent-method	PAMpal.accessors
$<-,AcousticStudy-method	PAMpal.accessors
AcousticEvent-class	AcousticEvent-class
AcousticStudy-class	AcousticStudy-class
addAnnotation	addAnnotation
addBinaries	addBinaries
addCalibration	addCalibration
addDatabase	addDatabase
addFPOD	addFPOD
addFunction	addFunction
addGps	addGps
addGps,AcousticEvent-method	addGps
addGps,AcousticStudy-method	addGps
addGps,ANY-method	addGps
addGps,data.frame-method	addGps
addGps,list-method	addGps
addHydrophoneDepth	addHydrophoneDepth
addMeasures	addMeasures
addNote	addNote
addRecordings	addRecordings
addSettings	addSettings
addWaveHeight	addWaveHeight
ancillary	PAMpal.accessors
ancillary,AcousticEvent-method	PAMpal.accessors
ancillary,AcousticStudy-method	PAMpal.accessors
ancillary<-	PAMpal.accessors
ancillary<-,AcousticEvent-method	PAMpal.accessors
ancillary<-,AcousticStudy-method	PAMpal.accessors
applyCalibration	addCalibration
bindStudies	bindStudies
calculateAverageSpectra	calculateAverageSpectra
calculateEchoDepth	calculateEchoDepth
calculateICI	calculateICI
calculateICI,AcousticEvent-method	calculateICI
calculateICI,AcousticStudy-method	calculateICI
calculateModuleData	calculateModuleData
checkAnnotation	addAnnotation
checkStudy	checkStudy
detectors	PAMpal.accessors
detectors,AcousticEvent-method	PAMpal.accessors
detectors,AcousticStudy-method	PAMpal.accessors
detectors<-	PAMpal.accessors
detectors<-,AcousticEvent-method	PAMpal.accessors
effort	PAMpal.accessors
effort,AcousticStudy-method	PAMpal.accessors
effort<-	PAMpal.accessors
effort<-,AcousticStudy-method	PAMpal.accessors
events	PAMpal.accessors
events,AcousticStudy-method	PAMpal.accessors
events<-	PAMpal.accessors
events<-,AcousticStudy-method	PAMpal.accessors
export_annomate	addAnnotation
export_banter	export_banter
exStudy	exStudy
files	PAMpal.accessors
files,AcousticEvent-method	PAMpal.accessors
files,AcousticStudy-method	PAMpal.accessors
files<-	PAMpal.accessors
files<-,AcousticEvent-method	PAMpal.accessors
files<-,AcousticStudy-method	PAMpal.accessors
filter.AcousticStudy	filter
filterEchoDepths	filterEchoDepths
getAnnotation	addAnnotation
getBinaryData	getBinaryData
getCepstrumData	getDetectorData
getClickData	getDetectorData
getClipData	getClipData
getDetectorData	getDetectorData
getFPODData	getDetectorData
getGPLData	getDetectorData
getICI	calculateICI
getMeasures	addMeasures
getNotes	addNote
getWarnings	getWarnings
getWhistleData	getDetectorData
gps	PAMpal.accessors
gps,AcousticStudy-method	PAMpal.accessors
gps<-	PAMpal.accessors
gps<-,AcousticStudy-method	PAMpal.accessors
id	PAMpal.accessors
id,AcousticEvent-method	PAMpal.accessors
id,AcousticStudy-method	PAMpal.accessors
id<-	PAMpal.accessors
id<-,AcousticEvent-method	PAMpal.accessors
id<-,AcousticStudy-method	PAMpal.accessors
is.AcousticEvent	is.AcousticEvent
is.AcousticStudy	is.AcousticStudy
is.PAMpalSettings	is.PAMpalSettings
loadPamguardXML	loadPamguardXML
localizations	PAMpal.accessors
localizations,AcousticEvent-method	PAMpal.accessors
localizations<-	PAMpal.accessors
localizations<-,AcousticEvent-method	PAMpal.accessors
markAnnotated	markAnnotated
matchEnvData,AcousticEvent-method	matchEnvData
matchEnvData,AcousticStudy-method	matchEnvData
matchRecordingUrl	addAnnotation
matchTimeData	matchTimeData
models	PAMpal.accessors
models,AcousticStudy-method	PAMpal.accessors
models<-	PAMpal.accessors
models<-,AcousticStudy-method	PAMpal.accessors
nCepstrum	getDetectorData
nClicks	getDetectorData
nDetections	getDetectorData
nGPL	getDetectorData
nWhistles	getDetectorData
PAMpal.accessors	PAMpal.accessors
PAMpalSettings	PAMpalSettings
PAMpalSettings-class	PAMpalSettings-class
parseEventClipName	writeEventClips
plotDataExplorer	plotDataExplorer
plotGram	plotGram
plotSpectrogram	plotWaveform
plotWaveform	plotWaveform
plotWigner	plotWaveform
pps	PAMpal.accessors
pps,AcousticStudy-method	PAMpal.accessors
pps<-	PAMpal.accessors
pps<-,AcousticStudy-method	PAMpal.accessors
prepAnnotation	addAnnotation
processPgDetections	processPgDetections
removeBinaries	removeBinaries
removeCalibration	removeCalibration
removeDatabase	removeDatabase
removeFunction	removeFunction
removeNote	removeNote
removeSettings	removeSettings
roccaWhistleCalcs	roccaWhistleCalcs
runDepthReview	runDepthReview
sampleDetector	sampleDetector
setSpecies	setSpecies
settings	PAMpal.accessors
settings,AcousticEvent-method	PAMpal.accessors
settings,AcousticStudy-method	PAMpal.accessors
settings<-	PAMpal.accessors
settings<-,AcousticEvent-method	PAMpal.accessors
settings<-,AcousticStudy-method	PAMpal.accessors
species	PAMpal.accessors
species,AcousticEvent-method	PAMpal.accessors
species,AcousticStudy-method	PAMpal.accessors
species<-	PAMpal.accessors
species<-,AcousticEvent-method	PAMpal.accessors
standardCepstrumCalcs	standardCepstrumCalcs
standardClickCalcs	standardClickCalcs
summariseDiveDepth	summariseDiveDepth
testCeps	testCeps
testClick	testClick
testGPL	testGPL
testWhistle	testWhistle
timeJoin	matchTimeData
updateFiles	updateFiles
updatePamObject	updatePamObject
writeEventClips	writeEventClips
writeWignerData	writeWignerData
[,AcousticEvent,ANY,ANY,ANY-method	PAMpal.accessors
[,AcousticStudy,ANY,ANY,ANY-method	PAMpal.accessors
[<-,AcousticEvent,ANY,ANY,ANY-method	PAMpal.accessors
[<-,AcousticStudy,ANY,ANY,ANY-method	PAMpal.accessors
[[,AcousticEvent,ANY,ANY-method	PAMpal.accessors
[[,AcousticStudy,ANY,ANY-method	PAMpal.accessors
[[<-,AcousticEvent,ANY,ANY,ANY-method	PAMpal.accessors
[[<-,AcousticStudy,ANY,ANY,ANY-method	PAMpal.accessors
