CalcSecondary

NAME

CalcSecondary - calculate secondary structure
SYNOPSIS

CalcSecondary
DESCRIPTION

Calculate the secondary structure of a protein using the algorithm published by Kabsch/Sander. The command operates on all selected residues of all selected molecules. It will set various properties on these residues, depending on the secondary structure. These properties are listed in a text window. They are used by the AddRibbon command to produce schematic drawings.

Note that editing the text has no effect on the definitons used. For changing the definitons it is most convenient to use the WriteSecondary command.

EXAMPLE

CalcSecondary
SEE ALSO

SelectMol, SelectRes, DefPropRes, WriteSecondary, AddRibbon

DATE

951010


Reto Koradi, kor@mol.biol.ethz.ch