Last updated on 2025-03-28 08:54:25 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.3.5 | 283.38 | 455.61 | 738.99 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.3.5 | 195.03 | 316.23 | 511.26 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.3.5 | 1412.27 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.3.5 | 1357.30 | OK | |||
| r-devel-macos-arm64 | 1.3.5 | 385.00 | OK | |||
| r-devel-macos-x86_64 | 1.3.5 | 673.00 | OK | |||
| r-devel-windows-x86_64 | 1.3.5 | 296.00 | 496.00 | 792.00 | OK | |
| r-patched-linux-x86_64 | 1.3.5 | 286.67 | 469.20 | 755.87 | OK | |
| r-release-linux-x86_64 | 1.3.5 | 287.12 | 466.59 | 753.71 | OK | |
| r-release-macos-arm64 | 1.3.5 | 321.00 | NOTE | |||
| r-release-macos-x86_64 | 1.3.5 | 645.00 | NOTE | |||
| r-release-windows-x86_64 | 1.3.5 | 270.00 | 487.00 | 757.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.3.5 | NOTE | ||||
| r-oldrel-macos-x86_64 | 1.3.5 | 602.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.3.5 | 340.00 | 634.00 | 974.00 | NOTE |
Version: 1.3.5
Check: examples
Result: ERROR
Running examples in ‘mets-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bptwin
> ### Title: Liability model for twin data
> ### Aliases: bptwin twinlm.time bptwin.time
>
> ### ** Examples
>
> data(twinstut)
> b0 <- bptwin(stutter~sex,
+ data=droplevels(subset(twinstut,zyg%in%c("mz","dz"))),
+ id="tvparnr",zyg="zyg",DZ="dz",type="ae")
Error in environment(mytr) <- baseenv() :
cannot set attribute on a 'builtin'
Calls: bptwin
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.3.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘basic-dutils.Rmd’ using rmarkdown
--- finished re-building ‘basic-dutils.Rmd’
--- re-building ‘binomial-family.Rmd’ using rmarkdown
--- finished re-building ‘binomial-family.Rmd’
--- re-building ‘binomial-twin.Rmd’ using rmarkdown
Quitting from binomial-twin.Rmd:356-359 [biprobit1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `environment(mytr) <- baseenv()`:
! cannot set attribute on a 'builtin'
---
Backtrace:
▆
1. └─mets::bptwin(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'binomial-twin.Rmd' failed with diagnostics:
cannot set attribute on a 'builtin'
--- failed re-building ‘binomial-twin.Rmd’
--- re-building ‘binreg-TRS.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/binreg-TRS_files/figure-html/unnamed-chunk-4-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33394 bytes
Input file size = 33520 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27541
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27541
Output IDAT size = 27541 bytes (5853 bytes decrease)
Output file size = 27619 bytes (5901 bytes = 17.60% decrease)
--- finished re-building ‘binreg-TRS.Rmd’
--- re-building ‘binreg-ate.Rmd’ using rmarkdown
--- finished re-building ‘binreg-ate.Rmd’
--- re-building ‘binreg.Rmd’ using rmarkdown
--- finished re-building ‘binreg.Rmd’
--- re-building ‘cifreg.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-3-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29464 bytes
Input file size = 29578 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24398
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24398
Output IDAT size = 24398 bytes (5066 bytes decrease)
Output file size = 24476 bytes (5102 bytes = 17.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-4-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17177 bytes
Input file size = 17279 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13514
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13514
Output IDAT size = 13514 bytes (3663 bytes decrease)
Output file size = 13592 bytes (3687 bytes = 21.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-6-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17762 bytes
Input file size = 17864 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14313
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14313
Output IDAT size = 14313 bytes (3449 bytes decrease)
Output file size = 14391 bytes (3473 bytes = 19.44% decrease)
--- finished re-building ‘cifreg.Rmd’
--- re-building ‘cooking-survival-data.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-4-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12416 bytes
Input file size = 12506 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10086
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10086
Output IDAT size = 10086 bytes (2330 bytes decrease)
Output file size = 10164 bytes (2342 bytes = 18.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-5-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19044 bytes
Input file size = 19146 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13453
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13453
Output IDAT size = 13453 bytes (5591 bytes decrease)
Output file size = 13531 bytes (5615 bytes = 29.33% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-6-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8766 bytes
Input file size = 8856 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6621
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6621
Output IDAT size = 6621 bytes (2145 bytes decrease)
Output file size = 6699 bytes (2157 bytes = 24.36% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-6-2.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14183 bytes
Input file size = 14273 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10058
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10058
Output IDAT size = 10058 bytes (4125 bytes decrease)
Output file size = 10136 bytes (4137 bytes = 28.98% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-8-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 13535 bytes
Input file size = 13625 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10680
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10680
Output IDAT size = 10680 bytes (2855 bytes decrease)
Output file size = 10758 bytes (2867 bytes = 21.04% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-8-2.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16226 bytes
Input file size = 16316 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12366
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12366
Output IDAT size = 12366 bytes (3860 bytes decrease)
Output file size = 12444 bytes (3872 bytes = 23.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-9-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 22317 bytes
Input file size = 22419 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17405
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17405
Output IDAT size = 17405 bytes (4912 bytes decrease)
Output file size = 17483 bytes (4936 bytes = 22.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-10-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21800 bytes
Input file size = 21902 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17162
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17162
Output IDAT size = 17162 bytes (4638 bytes decrease)
Output file size = 17240 bytes (4662 bytes = 21.29% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-11-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24118 bytes
Input file size = 24220 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18156
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18156
Output IDAT size = 18156 bytes (5962 bytes decrease)
Output file size = 18234 bytes (5986 bytes = 24.72% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-12-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12968 bytes
Input file size = 13058 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10314
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10314
Output IDAT size = 10314 bytes (2654 bytes decrease)
Output file size = 10392 bytes (2666 bytes = 20.42% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 7657 bytes
Input file size = 7735 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6380
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6380
Output IDAT size = 6380 bytes (1277 bytes decrease)
Output file size = 6458 bytes (1277 bytes = 16.51% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-2.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 7442 bytes
Input file size = 7520 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5944
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5944
Output IDAT size = 5944 bytes (1498 bytes decrease)
Output file size = 6022 bytes (1498 bytes = 19.92% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-3.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16221 bytes
Input file size = 16311 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12751
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12751
Output IDAT size = 12751 bytes (3470 bytes decrease)
Output file size = 12829 bytes (3482 bytes = 21.35% decrease)
--- finished re-building ‘cooking-survival-data.Rmd’
--- re-building ‘glm-utility.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/glm-utility_files/figure-html/unnamed-chunk-3-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26142 bytes
Input file size = 26256 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21135
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21135
Output IDAT size = 21135 bytes (5007 bytes decrease)
Output file size = 21213 bytes (5043 bytes = 19.21% decrease)
--- finished re-building ‘glm-utility.Rmd’
--- re-building ‘haplo-discrete-ttp.Rmd’ using rmarkdown
--- finished re-building ‘haplo-discrete-ttp.Rmd’
--- re-building ‘interval-discrete-survival.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/interval-discrete-survival_files/figure-html/unnamed-chunk-3-1.png
686x528 pixels, 8 bits/pixel, 253 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5459 bytes
Input file size = 6308 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4417
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4417
Output IDAT size = 4417 bytes (1042 bytes decrease)
Output file size = 4495 bytes (1813 bytes = 28.74% decrease)
--- finished re-building ‘interval-discrete-survival.Rmd’
--- re-building ‘marginal-cox.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-5-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 9374 bytes
Input file size = 9464 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7026
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7026
Output IDAT size = 7026 bytes (2348 bytes decrease)
Output file size = 7104 bytes (2360 bytes = 24.94% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-6-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 11740 bytes
Input file size = 11830 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8587
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8587
Output IDAT size = 8587 bytes (3153 bytes decrease)
Output file size = 8665 bytes (3165 bytes = 26.75% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-9-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60657 bytes
Input file size = 60819 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53824
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53824
Output IDAT size = 53824 bytes (6833 bytes decrease)
Output file size = 53902 bytes (6917 bytes = 11.37% decrease)
--- finished re-building ‘marginal-cox.Rmd’
--- re-building ‘mediation-survival.Rmd’ using rmarkdown
--- finished re-building ‘mediation-survival.Rmd’
--- re-building ‘phreg_rct.Rmd’ using rmarkdown
--- finished re-building ‘phreg_rct.Rmd’
--- re-building ‘quantitative-twin.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/scatter1-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 44960 bytes
Input file size = 45098 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36542
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36542
Output IDAT size = 36542 bytes (8418 bytes decrease)
Output file size = 36620 bytes (8478 bytes = 18.80% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/scatter2-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 52082 bytes
Input file size = 52232 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40796
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40796
Output IDAT size = 40796 bytes (11286 bytes decrease)
Output file size = 40874 bytes (11358 bytes = 21.75% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/marg1-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 10244 bytes
Input file size = 10334 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7524
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7524
Output IDAT size = 7524 bytes (2720 bytes decrease)
Output file size = 7602 bytes (2732 bytes = 26.44% decrease)
--- finished re-building ‘quantitative-twin.Rmd’
--- re-building ‘recurrent-events.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-4-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14712 bytes
Input file size = 14802 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11850
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11850
Output IDAT size = 11850 bytes (2862 bytes decrease)
Output file size = 11928 bytes (2874 bytes = 19.42% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-6-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18914 bytes
Input file size = 19016 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15347
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15347
Output IDAT size = 15347 bytes (3567 bytes decrease)
Output file size = 15425 bytes (3591 bytes = 18.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-7-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15318 bytes
Input file size = 15408 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12587
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12587
Output IDAT size = 12587 bytes (2731 bytes decrease)
Output file size = 12665 bytes (2743 bytes = 17.80% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-8-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19911 bytes
Input file size = 20013 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15268
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15268
Output IDAT size = 15268 bytes (4643 bytes decrease)
Output file size = 15346 bytes (4667 bytes = 23.32% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-9-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8497 bytes
Input file size = 8587 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6707
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6707
Output IDAT size = 6707 bytes (1790 bytes decrease)
Output file size = 6785 bytes (1802 bytes = 20.99% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-11-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12817 bytes
Input file size = 12907 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10187
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10187
Output IDAT size = 10187 bytes (2630 bytes decrease)
Output file size = 10265 bytes (2642 bytes = 20.47% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-14-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 11458 bytes
Input file size = 11548 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9121
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9121
Output IDAT size = 9121 bytes (2337 bytes decrease)
Output file size = 9199 bytes (2349 bytes = 20.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-19-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 10897 bytes
Input file size = 10987 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8793
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8793
Output IDAT size = 8793 bytes (2104 bytes decrease)
Output file size = 8871 bytes (2116 bytes = 19.26% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-21-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15891 bytes
Input file size = 15981 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10840
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10840
Output IDAT size = 10840 bytes (5051 bytes decrease)
Output file size = 10918 bytes (5063 bytes = 31.68% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-22-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8014 bytes
Input file size = 8092 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6490
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6490
Output IDAT size = 6490 bytes (1524 bytes decrease)
Output file size = 6568 bytes (1524 bytes = 18.83% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-23-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27625 bytes
Input file size = 27739 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19869
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19869
Output IDAT size = 19869 bytes (7756 bytes decrease)
Output file size = 19947 bytes (7792 bytes = 28.09% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-24-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18534 bytes
Input file size = 18636 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14954
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14954
Output IDAT size = 14954 bytes (3580 bytes decrease)
Output file size = 15032 bytes (3604 bytes = 19.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-26-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 11732 bytes
Input file size = 11822 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8714
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8714
Output IDAT size = 8714 bytes (3018 bytes decrease)
Output file size = 8792 bytes (3030 bytes = 25.63% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-27-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20137 bytes
Input file size = 20239 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16853
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16853
Output IDAT size = 16853 bytes (3284 bytes decrease)
Output file size = 16931 bytes (3308 bytes = 16.34% decrease)
--- finished re-building ‘recurrent-events.Rmd’
--- re-building ‘rmst-ate.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/rmst-ate_files/figure-html/unnamed-chunk-2-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 54310 bytes
Input file size = 54460 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46862
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46862
Output IDAT size = 46862 bytes (7448 bytes decrease)
Output file size = 46940 bytes (7520 bytes = 13.81% decrease)
--- finished re-building ‘rmst-ate.Rmd’
--- re-building ‘survival-ate.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/survival-ate_files/figure-html/unnamed-chunk-2-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14473 bytes
Input file size = 14563 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12368
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12368
Output IDAT size = 12368 bytes (2105 bytes decrease)
Output file size = 12446 bytes (2117 bytes = 14.54% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/survival-ate_files/figure-html/unnamed-chunk-3-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17439 bytes
Input file size = 17541 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14038
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14038
Output IDAT size = 14038 bytes (3401 bytes decrease)
Output file size = 14116 bytes (3425 bytes = 19.53% decrease)
--- finished re-building ‘survival-ate.Rmd’
--- re-building ‘time-to-event-family-studies-arev.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/survival-marginal-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 13873 bytes
Input file size = 13963 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10313
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10313
Output IDAT size = 10313 bytes (3560 bytes decrease)
Output file size = 10391 bytes (3572 bytes = 25.58% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14731 bytes
Input file size = 14821 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11198
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11198
Output IDAT size = 11198 bytes (3533 bytes decrease)
Output file size = 11276 bytes (3545 bytes = 23.92% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-9-1.png
357x275 pixels, 8 bits/pixel, 251 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5480 bytes
Input file size = 6323 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4899
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4899
Output IDAT size = 4899 bytes (581 bytes decrease)
Output file size = 4977 bytes (1346 bytes = 21.29% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance2-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16107 bytes
Input file size = 16197 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12228
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12228
Output IDAT size = 12228 bytes (3879 bytes decrease)
Output file size = 12306 bytes (3891 bytes = 24.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance3-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17124 bytes
Input file size = 17226 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13176
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13176
Output IDAT size = 13176 bytes (3948 bytes decrease)
Output file size = 13254 bytes (3972 bytes = 23.06% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-17-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8823 bytes
Input file size = 8913 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6840
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6840
Output IDAT size = 6840 bytes (1983 bytes decrease)
Output file size = 6918 bytes (1995 bytes = 22.38% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/biprobittime1-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12350 bytes
Input file size = 12440 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9619
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9619
Output IDAT size = 9619 bytes (2731 bytes decrease)
Output file size = 9697 bytes (2743 bytes = 22.05% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8476 bytes
Input file size = 8566 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6389
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6389
Output IDAT size = 6389 bytes (2087 bytes decrease)
Output file size = 6467 bytes (2099 bytes = 24.50% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-2.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8821 bytes
Input file size = 8911 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6793
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6793
Output IDAT size = 6793 bytes (2028 bytes decrease)
Output file size = 6871 bytes (2040 bytes = 22.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-3.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8623 bytes
Input file size = 8713 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6395
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6395
Output IDAT size = 6395 bytes (2228 bytes decrease)
Output file size = 6473 bytes (2240 bytes = 25.71% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-4.png
357x275 pixels, 8 bits/pixel, 213 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 2385 bytes
Input file size = 3114 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 1993
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 1993
Output IDAT size = 1993 bytes (392 bytes decrease)
Output file size = 2071 bytes (1043 bytes = 33.49% decrease)
--- finished re-building ‘time-to-event-family-studies-arev.Rmd’
--- re-building ‘twostage-survival.Rmd’ using rmarkdown
--- finished re-building ‘twostage-survival.Rmd’
--- re-building ‘while-alive.Rmd’ using rmarkdown
--- finished re-building ‘while-alive.Rmd’
SUMMARY: processing the following file failed:
‘binomial-twin.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.3.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘basic-dutils.Rmd’ using rmarkdown
--- finished re-building ‘basic-dutils.Rmd’
--- re-building ‘binomial-family.Rmd’ using rmarkdown
--- finished re-building ‘binomial-family.Rmd’
--- re-building ‘binomial-twin.Rmd’ using rmarkdown
Quitting from binomial-twin.Rmd:356-359 [biprobit1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `environment(mytr) <- baseenv()`:
! cannot set attribute on a 'builtin'
---
Backtrace:
▆
1. └─mets::bptwin(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'binomial-twin.Rmd' failed with diagnostics:
cannot set attribute on a 'builtin'
--- failed re-building ‘binomial-twin.Rmd’
--- re-building ‘binreg-TRS.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/binreg-TRS_files/figure-html/unnamed-chunk-4-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33394 bytes
Input file size = 33520 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27541
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27541
Output IDAT size = 27541 bytes (5853 bytes decrease)
Output file size = 27619 bytes (5901 bytes = 17.60% decrease)
--- finished re-building ‘binreg-TRS.Rmd’
--- re-building ‘binreg-ate.Rmd’ using rmarkdown
--- finished re-building ‘binreg-ate.Rmd’
--- re-building ‘binreg.Rmd’ using rmarkdown
--- finished re-building ‘binreg.Rmd’
--- re-building ‘cifreg.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-3-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29464 bytes
Input file size = 29578 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24398
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24398
Output IDAT size = 24398 bytes (5066 bytes decrease)
Output file size = 24476 bytes (5102 bytes = 17.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-4-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17177 bytes
Input file size = 17279 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13514
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13514
Output IDAT size = 13514 bytes (3663 bytes decrease)
Output file size = 13592 bytes (3687 bytes = 21.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-6-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17762 bytes
Input file size = 17864 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14313
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14313
Output IDAT size = 14313 bytes (3449 bytes decrease)
Output file size = 14391 bytes (3473 bytes = 19.44% decrease)
--- finished re-building ‘cifreg.Rmd’
--- re-building ‘cooking-survival-data.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-4-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12416 bytes
Input file size = 12506 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10086
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10086
Output IDAT size = 10086 bytes (2330 bytes decrease)
Output file size = 10164 bytes (2342 bytes = 18.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-5-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19044 bytes
Input file size = 19146 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13453
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13453
Output IDAT size = 13453 bytes (5591 bytes decrease)
Output file size = 13531 bytes (5615 bytes = 29.33% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-6-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8766 bytes
Input file size = 8856 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6621
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6621
Output IDAT size = 6621 bytes (2145 bytes decrease)
Output file size = 6699 bytes (2157 bytes = 24.36% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-6-2.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14183 bytes
Input file size = 14273 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10058
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10058
Output IDAT size = 10058 bytes (4125 bytes decrease)
Output file size = 10136 bytes (4137 bytes = 28.98% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-8-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 13535 bytes
Input file size = 13625 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10680
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10680
Output IDAT size = 10680 bytes (2855 bytes decrease)
Output file size = 10758 bytes (2867 bytes = 21.04% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-8-2.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16226 bytes
Input file size = 16316 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12366
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12366
Output IDAT size = 12366 bytes (3860 bytes decrease)
Output file size = 12444 bytes (3872 bytes = 23.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-9-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 22317 bytes
Input file size = 22419 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17405
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17405
Output IDAT size = 17405 bytes (4912 bytes decrease)
Output file size = 17483 bytes (4936 bytes = 22.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-10-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21800 bytes
Input file size = 21902 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17162
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17162
Output IDAT size = 17162 bytes (4638 bytes decrease)
Output file size = 17240 bytes (4662 bytes = 21.29% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-11-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24118 bytes
Input file size = 24220 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18156
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18156
Output IDAT size = 18156 bytes (5962 bytes decrease)
Output file size = 18234 bytes (5986 bytes = 24.72% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-12-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12968 bytes
Input file size = 13058 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10314
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10314
Output IDAT size = 10314 bytes (2654 bytes decrease)
Output file size = 10392 bytes (2666 bytes = 20.42% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 7657 bytes
Input file size = 7735 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6380
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6380
Output IDAT size = 6380 bytes (1277 bytes decrease)
Output file size = 6458 bytes (1277 bytes = 16.51% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-2.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 7442 bytes
Input file size = 7520 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5944
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5944
Output IDAT size = 5944 bytes (1498 bytes decrease)
Output file size = 6022 bytes (1498 bytes = 19.92% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-3.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16221 bytes
Input file size = 16311 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12751
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12751
Output IDAT size = 12751 bytes (3470 bytes decrease)
Output file size = 12829 bytes (3482 bytes = 21.35% decrease)
--- finished re-building ‘cooking-survival-data.Rmd’
--- re-building ‘glm-utility.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/glm-utility_files/figure-html/unnamed-chunk-3-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26142 bytes
Input file size = 26256 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21135
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21135
Output IDAT size = 21135 bytes (5007 bytes decrease)
Output file size = 21213 bytes (5043 bytes = 19.21% decrease)
--- finished re-building ‘glm-utility.Rmd’
--- re-building ‘haplo-discrete-ttp.Rmd’ using rmarkdown
--- finished re-building ‘haplo-discrete-ttp.Rmd’
--- re-building ‘interval-discrete-survival.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/interval-discrete-survival_files/figure-html/unnamed-chunk-3-1.png
686x528 pixels, 8 bits/pixel, 253 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5459 bytes
Input file size = 6308 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4417
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4417
Output IDAT size = 4417 bytes (1042 bytes decrease)
Output file size = 4495 bytes (1813 bytes = 28.74% decrease)
--- finished re-building ‘interval-discrete-survival.Rmd’
--- re-building ‘marginal-cox.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-5-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 9374 bytes
Input file size = 9464 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7026
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7026
Output IDAT size = 7026 bytes (2348 bytes decrease)
Output file size = 7104 bytes (2360 bytes = 24.94% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-6-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 11740 bytes
Input file size = 11830 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8587
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8587
Output IDAT size = 8587 bytes (3153 bytes decrease)
Output file size = 8665 bytes (3165 bytes = 26.75% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-9-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60657 bytes
Input file size = 60819 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53824
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53824
Output IDAT size = 53824 bytes (6833 bytes decrease)
Output file size = 53902 bytes (6917 bytes = 11.37% decrease)
--- finished re-building ‘marginal-cox.Rmd’
--- re-building ‘mediation-survival.Rmd’ using rmarkdown
--- finished re-building ‘mediation-survival.Rmd’
--- re-building ‘phreg_rct.Rmd’ using rmarkdown
--- finished re-building ‘phreg_rct.Rmd’
--- re-building ‘quantitative-twin.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/scatter1-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 44960 bytes
Input file size = 45098 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36542
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36542
Output IDAT size = 36542 bytes (8418 bytes decrease)
Output file size = 36620 bytes (8478 bytes = 18.80% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/scatter2-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 52082 bytes
Input file size = 52232 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40796
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40796
Output IDAT size = 40796 bytes (11286 bytes decrease)
Output file size = 40874 bytes (11358 bytes = 21.75% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/marg1-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 10244 bytes
Input file size = 10334 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7524
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7524
Output IDAT size = 7524 bytes (2720 bytes decrease)
Output file size = 7602 bytes (2732 bytes = 26.44% decrease)
--- finished re-building ‘quantitative-twin.Rmd’
--- re-building ‘recurrent-events.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-4-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14712 bytes
Input file size = 14802 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11850
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11850
Output IDAT size = 11850 bytes (2862 bytes decrease)
Output file size = 11928 bytes (2874 bytes = 19.42% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-6-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18914 bytes
Input file size = 19016 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15347
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15347
Output IDAT size = 15347 bytes (3567 bytes decrease)
Output file size = 15425 bytes (3591 bytes = 18.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-7-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15318 bytes
Input file size = 15408 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12587
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12587
Output IDAT size = 12587 bytes (2731 bytes decrease)
Output file size = 12665 bytes (2743 bytes = 17.80% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-8-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19911 bytes
Input file size = 20013 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15268
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15268
Output IDAT size = 15268 bytes (4643 bytes decrease)
Output file size = 15346 bytes (4667 bytes = 23.32% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-9-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8497 bytes
Input file size = 8587 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6707
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6707
Output IDAT size = 6707 bytes (1790 bytes decrease)
Output file size = 6785 bytes (1802 bytes = 20.99% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-11-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12817 bytes
Input file size = 12907 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10187
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10187
Output IDAT size = 10187 bytes (2630 bytes decrease)
Output file size = 10265 bytes (2642 bytes = 20.47% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-14-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 11458 bytes
Input file size = 11548 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9121
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9121
Output IDAT size = 9121 bytes (2337 bytes decrease)
Output file size = 9199 bytes (2349 bytes = 20.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-19-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 10897 bytes
Input file size = 10987 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8793
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8793
Output IDAT size = 8793 bytes (2104 bytes decrease)
Output file size = 8871 bytes (2116 bytes = 19.26% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-21-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15891 bytes
Input file size = 15981 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10840
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10840
Output IDAT size = 10840 bytes (5051 bytes decrease)
Output file size = 10918 bytes (5063 bytes = 31.68% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-22-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8014 bytes
Input file size = 8092 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6490
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6490
Output IDAT size = 6490 bytes (1524 bytes decrease)
Output file size = 6568 bytes (1524 bytes = 18.83% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-23-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27625 bytes
Input file size = 27739 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19869
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19869
Output IDAT size = 19869 bytes (7756 bytes decrease)
Output file size = 19947 bytes (7792 bytes = 28.09% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-24-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18534 bytes
Input file size = 18636 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14954
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14954
Output IDAT size = 14954 bytes (3580 bytes decrease)
Output file size = 15032 bytes (3604 bytes = 19.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-26-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 11732 bytes
Input file size = 11822 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8714
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8714
Output IDAT size = 8714 bytes (3018 bytes decrease)
Output file size = 8792 bytes (3030 bytes = 25.63% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-27-1.png
350x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20137 bytes
Input file size = 20239 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16853
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16853
Output IDAT size = 16853 bytes (3284 bytes decrease)
Output file size = 16931 bytes (3308 bytes = 16.34% decrease)
--- finished re-building ‘recurrent-events.Rmd’
--- re-building ‘rmst-ate.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/rmst-ate_files/figure-html/unnamed-chunk-2-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 54310 bytes
Input file size = 54460 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46862
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46862
Output IDAT size = 46862 bytes (7448 bytes decrease)
Output file size = 46940 bytes (7520 bytes = 13.81% decrease)
--- finished re-building ‘rmst-ate.Rmd’
--- re-building ‘survival-ate.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/survival-ate_files/figure-html/unnamed-chunk-2-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14473 bytes
Input file size = 14563 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12368
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12368
Output IDAT size = 12368 bytes (2105 bytes decrease)
Output file size = 12446 bytes (2117 bytes = 14.54% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/survival-ate_files/figure-html/unnamed-chunk-3-1.png
686x528 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17439 bytes
Input file size = 17541 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14038
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14038
Output IDAT size = 14038 bytes (3401 bytes decrease)
Output file size = 14116 bytes (3425 bytes = 19.53% decrease)
--- finished re-building ‘survival-ate.Rmd’
--- re-building ‘time-to-event-family-studies-arev.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/survival-marginal-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 13873 bytes
Input file size = 13963 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10313
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10313
Output IDAT size = 10313 bytes (3560 bytes decrease)
Output file size = 10391 bytes (3572 bytes = 25.58% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 14731 bytes
Input file size = 14821 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11198
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11198
Output IDAT size = 11198 bytes (3533 bytes decrease)
Output file size = 11276 bytes (3545 bytes = 23.92% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-9-1.png
357x275 pixels, 8 bits/pixel, 251 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5480 bytes
Input file size = 6323 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4899
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4899
Output IDAT size = 4899 bytes (581 bytes decrease)
Output file size = 4977 bytes (1346 bytes = 21.29% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance2-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16107 bytes
Input file size = 16197 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12228
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12228
Output IDAT size = 12228 bytes (3879 bytes decrease)
Output file size = 12306 bytes (3891 bytes = 24.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance3-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17124 bytes
Input file size = 17226 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13176
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13176
Output IDAT size = 13176 bytes (3948 bytes decrease)
Output file size = 13254 bytes (3972 bytes = 23.06% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-17-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8823 bytes
Input file size = 8913 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6840
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6840
Output IDAT size = 6840 bytes (1983 bytes decrease)
Output file size = 6918 bytes (1995 bytes = 22.38% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/biprobittime1-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12350 bytes
Input file size = 12440 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9619
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9619
Output IDAT size = 9619 bytes (2731 bytes decrease)
Output file size = 9697 bytes (2743 bytes = 22.05% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-1.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8476 bytes
Input file size = 8566 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6389
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6389
Output IDAT size = 6389 bytes (2087 bytes decrease)
Output file size = 6467 bytes (2099 bytes = 24.50% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-2.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8821 bytes
Input file size = 8911 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6793
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6793
Output IDAT size = 6793 bytes (2028 bytes decrease)
Output file size = 6871 bytes (2040 bytes = 22.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-3.png
357x275 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8623 bytes
Input file size = 8713 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6395
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6395
Output IDAT size = 6395 bytes (2228 bytes decrease)
Output file size = 6473 bytes (2240 bytes = 25.71% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-4.png
357x275 pixels, 8 bits/pixel, 213 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 2385 bytes
Input file size = 3114 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 1993
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 1993
Output IDAT size = 1993 bytes (392 bytes decrease)
Output file size = 2071 bytes (1043 bytes = 33.49% decrease)
--- finished re-building ‘time-to-event-family-studies-arev.Rmd’
--- re-building ‘twostage-survival.Rmd’ using rmarkdown
--- finished re-building ‘twostage-survival.Rmd’
--- re-building ‘while-alive.Rmd’ using rmarkdown
--- finished re-building ‘while-alive.Rmd’
SUMMARY: processing the following file failed:
‘binomial-twin.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.3.5
Check: installed package size
Result: NOTE
installed size is 29.0Mb
sub-directories of 1Mb or more:
R 2.0Mb
doc 3.6Mb
libs 21.4Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64