Last updated on 2025-11-29 09:49:46 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 265.72 | 278.30 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.87 | 216.77 | 227.64 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 19.00 | 281.00 | 300.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 185.00 | 198.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [95s/211s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.855, system: 0.107, elapsed: 7.559 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.029, system: 0.350, elapsed: 36.691 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.026, elapsed: 0.569 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.341, system: 0.384, elapsed: 10.334 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.009, elapsed: 0.341 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.262, system: 0.963, elapsed: 58.280 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.877, system: 0.101, elapsed: 3.739 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.051, system: 0.391, elapsed: 21.766 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.025, elapsed: 0.359 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.537, system: 0.460, elapsed: 8.616 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.010, elapsed: 0.199 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.437, system: 1.059, elapsed: 35.990 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.990, system: 0.164, elapsed: 3.995 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.264, system: 0.517, elapsed: 18.141 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.024, elapsed: 0.377 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.208, system: 0.300, elapsed: 6.478 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.012, elapsed: 0.385 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.370, system: 0.311, elapsed: 2.222 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.989, system: 1.601, elapsed: 33.166 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.977, system: 0.136, elapsed: 5.611 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.182, system: 0.383, elapsed: 23.147 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.023, elapsed: 0.505 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.215, system: 0.275, elapsed: 9.495 seconds]
Computing values for grid cells...
... done. [user: 0.200, system: 0.012, elapsed: 0.352 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.802, system: 0.887, elapsed: 26.633 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.301, system: 1.805, elapsed: 67.281 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/133s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.658, system: 0.066, elapsed: 2.030 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.517, system: 0.151, elapsed: 12.287 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.012, elapsed: 0.191 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.305, system: 0.215, elapsed: 4.090 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.007, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.350, system: 0.476, elapsed: 19.537 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.823, system: 0.087, elapsed: 2.306 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.146, system: 0.379, elapsed: 13.909 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.018, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.901, system: 0.273, elapsed: 5.670 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.008, elapsed: 0.234 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.803, system: 0.805, elapsed: 23.179 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.868, system: 0.088, elapsed: 3.394 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.672, system: 0.137, elapsed: 19.174 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.425 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.761, system: 0.194, elapsed: 6.454 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.229 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.138, system: 0.243, elapsed: 1.155 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.475, system: 0.724, elapsed: 32.035 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.668, system: 0.053, elapsed: 3.067 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.624, system: 0.130, elapsed: 17.911 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.014, elapsed: 0.455 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.828, system: 0.194, elapsed: 7.065 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.277 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.815, system: 0.501, elapsed: 19.513 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.977, system: 0.923, elapsed: 49.633 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64