Last updated on 2025-10-07 09:49:51 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.80 | 251.42 | 265.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 8.78 | 235.10 | 243.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.26 | 285.36 | 300.62 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 197.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 195.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/133s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.767, system: 0.113, elapsed: 2.876 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.294, system: 0.310, elapsed: 13.670 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.020, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.853, system: 0.230, elapsed: 5.082 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.192 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.817, system: 0.711, elapsed: 22.990 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.035, elapsed: 1.675 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.068, system: 0.108, elapsed: 10.307 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.221 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.716, system: 0.173, elapsed: 4.994 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.281 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.133, system: 0.353, elapsed: 18.153 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.592, system: 0.047, elapsed: 2.239 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.136, system: 0.114, elapsed: 19.525 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.513 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.880, system: 0.188, elapsed: 8.744 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.250 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.176, system: 0.215, elapsed: 1.160 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.775, system: 0.605, elapsed: 33.598 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.581, system: 0.047, elapsed: 3.518 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.195, system: 0.096, elapsed: 16.927 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.012, elapsed: 0.317 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.909, system: 0.194, elapsed: 6.657 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.318 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.427, system: 0.483, elapsed: 20.860 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.147, system: 0.869, elapsed: 49.865 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/135s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.694, system: 0.097, elapsed: 2.412 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.225, system: 0.339, elapsed: 16.015 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.016, elapsed: 0.319 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.595, system: 0.197, elapsed: 6.880 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.006, elapsed: 0.374 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.387, system: 0.681, elapsed: 26.946 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.053, elapsed: 3.275 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.925, system: 0.091, elapsed: 18.465 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.483 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.674, system: 0.158, elapsed: 7.975 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.382 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.989, system: 0.346, elapsed: 31.786 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.554, system: 0.034, elapsed: 2.833 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.055, system: 0.078, elapsed: 14.529 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.010, elapsed: 0.273 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.608, system: 0.175, elapsed: 5.671 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.013, elapsed: 0.287 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.060, system: 0.243, elapsed: 0.941 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.274, system: 0.583, elapsed: 25.694 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.462, system: 0.031, elapsed: 2.216 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.009, system: 0.095, elapsed: 13.235 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.646, system: 0.170, elapsed: 6.524 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.006, elapsed: 0.260 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 9.938, system: 0.455, elapsed: 19.397 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.091, system: 0.798, elapsed: 42.945 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64