Last updated on 2025-03-19 08:52:43 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.2 | 9.31 | 193.93 | 203.24 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.0.2 | 6.18 | 146.07 | 152.25 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.0.2 | 318.69 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.0.2 | 322.83 | OK | |||
| r-devel-macos-arm64 | 0.0.2 | 89.00 | ERROR | |||
| r-devel-macos-x86_64 | 0.0.2 | 153.00 | ERROR | |||
| r-devel-windows-x86_64 | 0.0.2 | 11.00 | 192.00 | 203.00 | OK | |
| r-patched-linux-x86_64 | 0.0.2 | 9.04 | 190.53 | 199.57 | OK | |
| r-release-linux-x86_64 | 0.0.2 | 8.33 | 184.89 | 193.22 | OK | |
| r-release-macos-arm64 | 0.0.2 | 68.00 | ERROR | |||
| r-release-macos-x86_64 | 0.0.2 | 161.00 | ERROR | |||
| r-release-windows-x86_64 | 0.0.2 | 11.00 | 191.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 0.0.2 | 60.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 0.0.2 | 159.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 0.0.2 | 13.00 | 214.00 | 227.00 | ERROR |
Version: 0.0.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gaawr2.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
running: bash -c "export message=\"Hello, world!\"
echo \"print('\$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo \${message} | \\
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \\
cat
rm hello.*"
Quitting from gaawr2.Rmd:407-413 [ensdb]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `h()`:
! error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
---
Backtrace:
▆
1. ├─ensembldb::metadata(EnsDb.Hsapiens.v75)
2. └─base::.handleSimpleError(...)
3. └─base (local) h(simpleError(msg, call))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
--- failed re-building ‘gaawr2.Rmd’
--- re-building ‘web.Rmd’ using rmarkdown
[WARNING] Citeproc: citation tsv not found
--- finished re-building ‘web.Rmd’
SUMMARY: processing the following file failed:
‘gaawr2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-macos-arm64, r-devel-macos-x86_64, r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 0.0.2
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.0.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gaawr2.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
Failed with error: 'there is no package called 'pan''
Failed with error: 'package 'mice' could not be loaded'
running: bash -c "export message=\"Hello, world!\"
echo \"print('\$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo \${message} | \\
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \\
cat
rm hello.*"
Quitting from gaawr2.Rmd:173-191 [hwe]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'pan'
---
Backtrace:
▆
1. └─base::loadNamespace(x)
2. ├─base::namespaceImport(...)
3. └─base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
4. ├─base::namespaceImportFrom(...)
5. │ └─base::asNamespace(ns)
6. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
7. ├─base::namespaceImport(...)
8. └─base::loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
9. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
10. └─base (local) withOneRestart(expr, restarts[[1L]])
11. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
there is no package called 'pan'
--- failed re-building ‘gaawr2.Rmd’
--- re-building ‘web.Rmd’ using rmarkdown
[WARNING] Citeproc: citation tsv not found
--- finished re-building ‘web.Rmd’
SUMMARY: processing the following file failed:
‘gaawr2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-arm64
Version: 0.0.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gaawr2.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
Failed with error: 'there is no package called 'systemfonts''
running: bash -c "export message=\"Hello, world!\"
echo \"print('\$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo \${message} | \\
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \\
cat
rm hello.*"
Quitting from gaawr2.Rmd:113-148 [diabetes]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'systemfonts'
---
Backtrace:
▆
1. ├─... %>% ...
2. └─base::loadNamespace(x)
3. ├─base::namespaceImportFrom(...)
4. │ └─base::asNamespace(ns)
5. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
6. ├─base::namespaceImportFrom(...)
7. │ └─base::asNamespace(ns)
8. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
9. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
10. └─base (local) withOneRestart(expr, restarts[[1L]])
11. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
there is no package called 'systemfonts'
--- failed re-building ‘gaawr2.Rmd’
--- re-building ‘web.Rmd’ using rmarkdown
[WARNING] Citeproc: citation tsv not found
--- finished re-building ‘web.Rmd’
SUMMARY: processing the following file failed:
‘gaawr2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.0.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'gaawr2.Rmd' using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
running: bash -c "export message=\"Hello, world!\"
echo \"print('$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo ${message} | \
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \
cat
rm hello.*"
Quitting from gaawr2.Rmd:407-413 [ensdb]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `h()`:
! error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
---
Backtrace:
▆
1. ├─ensembldb::metadata(EnsDb.Hsapiens.v75)
2. └─base::.handleSimpleError(...)
3. └─base (local) h(simpleError(msg, call))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
--- failed re-building 'gaawr2.Rmd'
--- re-building 'web.Rmd' using rmarkdown
[WARNING] Citeproc: citation tsv not found
--- finished re-building 'web.Rmd'
SUMMARY: processing the following file failed:
'gaawr2.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64