Fast and Scalable Single Cell Differential Expression Analysis using Mixed-Effects Models


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Documentation for package ‘FLASHMM’ version 1.1.0

Help Pages

contrast.matrix Construct Contrast Matrix
lmm Fitting Linear Mixed-effects Models
lmmfit Fitting Linear Mixed-effects Models
lmmtest Testing Fixed Effects and Contrasts of the Fixed Effects
simuRNAseq Simulating Multi-sample Multi-cell-type scRNA-seq Dataset based on Negative Binomial Distribution
sslmm Computing Summary-level Data from Individual-level Data