Implements marker-based estimation of heritability when observations on genetically identical replicates are available. These can be either observations on individual plants or plot-level data in a field trial. Heritability can then be estimated using a mixed model for the individual plant or plot data. For comparison, also mixed-model based estimation using genotypic means and estimation of repeatability with ANOVA are implemented. For illustration the package contains several datasets for the model species Arabidopsis thaliana.
| Version: | 1.4 |
| Depends: | R (≥ 4.0), MASS (≥ 3.1.20) |
| Suggests: | knitr, rmarkdown |
| Published: | 2023-08-24 |
| DOI: | 10.32614/CRAN.package.heritability |
| Author: | Willem Kruijer, with a contribution from Ian White (the internal function pin). Contains data collected by Padraic Flood and Rik Kooke. |
| Maintainer: | Willem Kruijer <willem.kruijer at wur.nl> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| In views: | Agriculture |
| CRAN checks: | heritability results |
| Reference manual: | heritability.pdf |
| Package source: | heritability_1.4.tar.gz |
| Windows binaries: | r-devel: heritability_1.4.zip, r-release: heritability_1.4.zip, r-oldrel: heritability_1.4.zip |
| macOS binaries: | r-devel (arm64): heritability_1.4.tgz, r-release (arm64): heritability_1.4.tgz, r-oldrel (arm64): heritability_1.4.tgz, r-devel (x86_64): heritability_1.4.tgz, r-release (x86_64): heritability_1.4.tgz, r-oldrel (x86_64): heritability_1.4.tgz |
| Old sources: | heritability archive |
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