Implementation of the bootstrapping approach for the estimation of clustering stability and its application in estimating the number of clusters, as introduced by Yu et al (2016)<doi:10.1142/9789814749411_0007>. Implementation of the non-parametric bootstrap approach to assessing the stability of module detection in a graph, the extension for the selection of a parameter set that defines a graph from data in a way that optimizes stability and the corresponding visualization functions, as introduced by Tian et al (2021) <doi:10.1002/sam.11495>. Implemented out-of-bag stability estimation function and k-select Smin-based k-selection function as introduced by Liu et al (2022) <doi:10.1002/sam.11593>. Implemented ensemble clustering method based-on k-means clustering method, spectral clustering method and hierarchical clustering method.
| Version: |
0.4.2 |
| Depends: |
R (≥ 3.5.1) |
| Imports: |
cluster, mclust (≥ 5.0.0), flexclust, fpc, plyr, dplyr, doParallel, foreach, igraph (≥ 1.2.0), compiler, stats, parallel, grid, grDevices, ggplot2, gridExtra, intergraph, GGally, network, kernlab, sna, progress |
| Published: |
2025-06-17 |
| DOI: |
10.32614/CRAN.package.bootcluster |
| Author: |
Han Yu [aut],
Mingmei Tian [aut],
Tianmou Liu  [aut,
cre] |
| Maintainer: |
Tianmou Liu <tianmouliu at outlook.com> |
| License: |
GPL-2 |
| NeedsCompilation: |
no |
| Materials: |
README, NEWS |
| CRAN checks: |
bootcluster results [issues need fixing before 2025-11-23] |