Last updated on 2025-11-28 09:51:04 CET.
| Package | ERROR | OK |
|---|---|---|
| EcoCleanR | 3 | 8 |
Current CRAN status: ERROR: 3, OK: 8
Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘data_cleaning.Rmd’ using rmarkdown
trying URL 'https://geodata.ucdavis.edu/gadm/gadm3.6/gadm36_adm0_r3_pk.rds'
Content type 'unknown' length 2438344 bytes (2.3 MB)
==================================================
downloaded 2.3 MB
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘data_cleaning.Rmd’
--- re-building ‘data_merging.Rmd’ using rmarkdown
Quitting from data_merging.Rmd:26-32 [setup]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'robis'
---
Backtrace:
▆
1. └─base::library(robis)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'data_merging.Rmd' failed with diagnostics:
there is no package called 'robis'
--- failed re-building ‘data_merging.Rmd’
SUMMARY: processing the following file failed:
‘data_merging.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64
Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘data_cleaning.Rmd’ using rmarkdown
trying URL 'https://geodata.ucdavis.edu/gadm/gadm3.6/gadm36_adm0_r3_pk.rds'
Content type 'unknown' length 2438344 bytes (2.3 MB)
==================================================
downloaded 2.3 MB
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘data_cleaning.Rmd’
--- re-building ‘data_merging.Rmd’ using rmarkdown
Quitting from data_merging.Rmd:48-67 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `curl::curl_fetch_memory()`:
! Transferred a partial file [api.gbif.org]:
transfer closed with outstanding read data remaining
---
Backtrace:
▆
1. ├─rgbif::occ_data(...)
2. │ └─rgbif (local) .get_occ_data(curlopts = curlopts)
3. │ └─rgbif:::gbif_GET(url, args, TRUE, curlopts)
4. │ └─cli$get(query = args)
5. │ └─private$make_request(rr, mock)
6. │ └─crul:::crul_fetch(opts)
7. │ └─curl::curl_fetch_memory(x$url$url, handle = x$url$handle)
8. └─curl:::raise_libcurl_error(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'data_merging.Rmd' failed with diagnostics:
Transferred a partial file [api.gbif.org]:
transfer closed with outstanding read data remaining
--- failed re-building ‘data_merging.Rmd’
SUMMARY: processing the following file failed:
‘data_merging.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc