CRAN Package Check Results for Package proteus

Last updated on 2025-03-22 08:53:25 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.4 23.64 1936.00 1959.64 ERROR
r-devel-linux-x86_64-debian-gcc 1.1.4 14.03 4010.29 4024.32 ERROR
r-devel-linux-x86_64-fedora-clang 1.1.4 254.74 OK
r-devel-linux-x86_64-fedora-gcc 1.1.4 240.63 OK
r-devel-macos-arm64 1.1.4 68.00 OK
r-devel-macos-x86_64 1.1.4 271.00 OK
r-devel-windows-x86_64 1.1.4 20.00 133.00 153.00 OK
r-patched-linux-x86_64 1.1.4 20.06 1910.02 1930.08 ERROR
r-release-linux-x86_64 1.1.4 22.35 1857.53 1879.88 ERROR
r-release-macos-arm64 1.1.4 65.00 OK
r-release-macos-x86_64 1.1.4 96.00 OK
r-release-windows-x86_64 1.1.4 22.00 133.00 155.00 OK
r-oldrel-macos-arm64 1.1.4 OK
r-oldrel-macos-x86_64 1.1.4 164.00 OK
r-oldrel-windows-x86_64 1.1.4 26.00 171.00 197.00 OK

Check Details

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [30m/44m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(proteus) > > test_check("proteus") block 1 581 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3208555 Test loss: 0.3292923 epoch: 6 Train loss: 0.3276776 Test loss: 0.3326618 epoch: 9 Train loss: 0.3308174 Test loss: 0.3374829 epoch: 12 Train loss: 0.3325023 Test loss: 0.3314765 epoch: 15 Train loss: 0.3347159 Test loss: 0.3340681 epoch: 18 Train loss: 0.3257892 Test loss: 0.3321512 epoch: 21 Train loss: 0.3341001 Test loss: 0.3261094 early stop at epoch: 23 Train loss: 0.361671 Test loss: 0.3312888 block 2 1142 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3357078 Test loss: 0.3326254 epoch: 6 Train loss: 0.3281114 Test loss: 0.3332545 epoch: 9 Train loss: 0.3279071 Test loss: 0.3274727 epoch: 12 Train loss: 0.3413087 Test loss: 0.3353977 early stop at epoch: 12 Train loss: 0.4737277 Test loss: 0.3343993 final training on all 3 1703 sequence for training epoch: 3 Train loss: 0.33419 epoch: 6 Train loss: 0.3344037 epoch: 9 Train loss: 0.3277188 epoch: 12 Train loss: 0.3307849 epoch: 15 Train loss: 0.3321109 epoch: 18 Train loss: 0.3288007 epoch: 21 Train loss: 0.3293982 epoch: 24 Train loss: 0.3310115 epoch: 27 Train loss: 0.3331793 epoch: 30 Train loss: 0.3361465 variational model based on normal latent distribution with 144 tensors and 8190 parameters proteus: 896.329 sec elapsed date and value gaps filled with kalman imputation block 1 801 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3277009 Test loss: 0.3299768 epoch: 6 Train loss: 0.3294096 Test loss: 0.3293288 epoch: 9 Train loss: 0.327773 Test loss: 0.3295914 early stop at epoch: 10 Train loss: 0.3344282 Test loss: 0.3195932 block 2 1602 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3286678 Test loss: 0.3308007 epoch: 6 Train loss: 0.3273056 Test loss: 0.3329718 epoch: 9 Train loss: 0.3294753 Test loss: 0.3332845 epoch: 12 Train loss: 0.3286377 Test loss: 0.3307178 epoch: 15 Train loss: 0.3290938 Test loss: 0.3343507 early stop at epoch: 15 Train loss: 0.3255636 Test loss: 0.3423874 final training on all 3 2403 sequence for training epoch: 3 Train loss: 0.3306837 epoch: 6 Train loss: 0.3286098 epoch: 9 Train loss: 0.3302987 epoch: 12 Train loss: 0.3308404 epoch: 15 Train loss: 0.3316363 epoch: 18 Train loss: 0.3305579 epoch: 21 Train loss: 0.3296561 epoch: 24 Train loss: 0.3288558 epoch: 27 Train loss: 0.3285954 epoch: 30 Train loss: 0.3292858 variational model based on normal latent distribution with 144 tensors and 60670 parameters proteus: 1750.484 sec elapsed [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ── Error: 'workers >= 1' is not TRUE Backtrace: ▆ 1. └─proteus::proteus_random_search(...) at test-main.R:44:13 2. └─future::plan(...) 3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init) 4. └─future (local) plan_init() 5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE) 6. └─future (local) strategy(..., workers = workers, envir = envir) 7. └─future:::stop_if_not(...) 8. └─future:::stopf(...) [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [65m/56m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(proteus) > > test_check("proteus") block 1 581 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3223717 Test loss: 0.3306473 epoch: 6 Train loss: 0.3294221 Test loss: 0.3324009 epoch: 9 Train loss: 0.3325764 Test loss: 0.3368628 epoch: 12 Train loss: 0.3333617 Test loss: 0.332121 epoch: 15 Train loss: 0.3357042 Test loss: 0.3353049 epoch: 18 Train loss: 0.3276428 Test loss: 0.3323678 epoch: 21 Train loss: 0.3335544 Test loss: 0.3258853 early stop at epoch: 23 Train loss: 0.3616272 Test loss: 0.3278691 block 2 1142 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3353086 Test loss: 0.3330892 epoch: 6 Train loss: 0.3286859 Test loss: 0.3336197 epoch: 9 Train loss: 0.3291716 Test loss: 0.3282563 epoch: 12 Train loss: 0.342394 Test loss: 0.3354015 early stop at epoch: 13 Train loss: 0.278054 Test loss: 0.3178097 final training on all 3 1703 sequence for training epoch: 3 Train loss: 0.3341904 epoch: 6 Train loss: 0.3344039 epoch: 9 Train loss: 0.3277193 epoch: 12 Train loss: 0.330785 epoch: 15 Train loss: 0.332111 epoch: 18 Train loss: 0.3288006 epoch: 21 Train loss: 0.3293977 epoch: 24 Train loss: 0.3310112 epoch: 27 Train loss: 0.3331797 epoch: 30 Train loss: 0.3361475 variational model based on normal latent distribution with 144 tensors and 8190 parameters proteus: 1110.101 sec elapsed date and value gaps filled with kalman imputation block 1 801 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3280554 Test loss: 0.3307871 epoch: 6 Train loss: 0.3297836 Test loss: 0.330828 epoch: 9 Train loss: 0.3275634 Test loss: 0.3286626 epoch: 12 Train loss: 0.3282552 Test loss: 0.3311947 epoch: 15 Train loss: 0.3272094 Test loss: 0.3289507 epoch: 18 Train loss: 0.3291131 Test loss: 0.3328734 early stop at epoch: 18 Train loss: 0.3381767 Test loss: 0.3203828 block 2 1602 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3235908 Test loss: 0.3288107 epoch: 6 Train loss: 0.3223397 Test loss: 0.3305599 epoch: 9 Train loss: 0.3256632 Test loss: 0.3308328 epoch: 12 Train loss: 0.3235124 Test loss: 0.3284197 early stop at epoch: 14 Train loss: 0.3165956 Test loss: 0.3332325 final training on all 3 2403 sequence for training epoch: 3 Train loss: 0.3306837 epoch: 6 Train loss: 0.32861 epoch: 9 Train loss: 0.3302987 epoch: 12 Train loss: 0.3308404 epoch: 15 Train loss: 0.3316363 epoch: 18 Train loss: 0.3305584 epoch: 21 Train loss: 0.3296561 epoch: 24 Train loss: 0.3288558 epoch: 27 Train loss: 0.3285954 epoch: 30 Train loss: 0.3292858 variational model based on normal latent distribution with 144 tensors and 60670 parameters proteus: 2253.264 sec elapsed [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ── Error: 'workers >= 1' is not TRUE Backtrace: ▆ 1. └─proteus::proteus_random_search(...) at test-main.R:44:13 2. └─future::plan(...) 3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init) 4. └─future (local) plan_init() 5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE) 6. └─future (local) strategy(..., workers = workers, envir = envir) 7. └─future:::stop_if_not(...) 8. └─future:::stopf(...) [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [29m/43m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(proteus) > > test_check("proteus") block 1 581 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3199766 Test loss: 0.3303073 epoch: 6 Train loss: 0.3283107 Test loss: 0.3326725 epoch: 9 Train loss: 0.3332206 Test loss: 0.3351827 epoch: 12 Train loss: 0.330341 Test loss: 0.3314894 epoch: 15 Train loss: 0.3341951 Test loss: 0.3340576 epoch: 18 Train loss: 0.3234637 Test loss: 0.3308683 epoch: 21 Train loss: 0.3330943 Test loss: 0.3266735 early stop at epoch: 23 Train loss: 0.361669 Test loss: 0.3329948 block 2 1142 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3348371 Test loss: 0.3330842 epoch: 6 Train loss: 0.328921 Test loss: 0.3341379 epoch: 9 Train loss: 0.3306004 Test loss: 0.3277192 epoch: 12 Train loss: 0.3403678 Test loss: 0.3347638 early stop at epoch: 13 Train loss: 0.2544201 Test loss: 0.3178135 final training on all 3 1703 sequence for training epoch: 3 Train loss: 0.33419 epoch: 6 Train loss: 0.3344037 epoch: 9 Train loss: 0.3277188 epoch: 12 Train loss: 0.3307849 epoch: 15 Train loss: 0.3321109 epoch: 18 Train loss: 0.3288007 epoch: 21 Train loss: 0.3293982 epoch: 24 Train loss: 0.3310115 epoch: 27 Train loss: 0.3331793 epoch: 30 Train loss: 0.3361465 variational model based on normal latent distribution with 144 tensors and 8190 parameters proteus: 857.912 sec elapsed date and value gaps filled with kalman imputation block 1 801 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3267026 Test loss: 0.3296768 epoch: 6 Train loss: 0.329943 Test loss: 0.3291276 epoch: 9 Train loss: 0.3274457 Test loss: 0.3287133 epoch: 12 Train loss: 0.3279254 Test loss: 0.3295515 epoch: 15 Train loss: 0.326198 Test loss: 0.3271685 epoch: 18 Train loss: 0.327614 Test loss: 0.3306258 early stop at epoch: 18 Train loss: 0.3392735 Test loss: 0.3171166 block 2 1602 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3227517 Test loss: 0.3285946 epoch: 6 Train loss: 0.3218644 Test loss: 0.3298174 epoch: 9 Train loss: 0.3238878 Test loss: 0.3305683 epoch: 12 Train loss: 0.3223115 Test loss: 0.3277066 early stop at epoch: 14 Train loss: 0.3319073 Test loss: 0.3299995 final training on all 3 2403 sequence for training epoch: 3 Train loss: 0.3306837 epoch: 6 Train loss: 0.3286098 epoch: 9 Train loss: 0.3302987 epoch: 12 Train loss: 0.3308404 epoch: 15 Train loss: 0.3316363 epoch: 18 Train loss: 0.3305579 epoch: 21 Train loss: 0.3296561 epoch: 24 Train loss: 0.3288558 epoch: 27 Train loss: 0.3285954 epoch: 30 Train loss: 0.3292858 variational model based on normal latent distribution with 144 tensors and 60670 parameters proteus: 1706.05 sec elapsed [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ── Error: 'workers >= 1' is not TRUE Backtrace: ▆ 1. └─proteus::proteus_random_search(...) at test-main.R:44:13 2. └─future::plan(...) 3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init) 4. └─future (local) plan_init() 5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE) 6. └─future (local) strategy(..., workers = workers, envir = envir) 7. └─future:::stop_if_not(...) 8. └─future:::stopf(...) [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [29m/43m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(proteus) > > test_check("proteus") block 1 581 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3205469 Test loss: 0.3285971 epoch: 6 Train loss: 0.3290139 Test loss: 0.3308346 epoch: 9 Train loss: 0.3290147 Test loss: 0.3369198 epoch: 12 Train loss: 0.3303776 Test loss: 0.3307128 epoch: 15 Train loss: 0.3335676 Test loss: 0.3323554 epoch: 18 Train loss: 0.3242141 Test loss: 0.3306927 epoch: 21 Train loss: 0.3331281 Test loss: 0.3246296 early stop at epoch: 23 Train loss: 0.3616716 Test loss: 0.3360157 block 2 1142 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3350264 Test loss: 0.3336223 epoch: 6 Train loss: 0.326845 Test loss: 0.3336842 epoch: 9 Train loss: 0.3294868 Test loss: 0.3282494 epoch: 12 Train loss: 0.3394148 Test loss: 0.3346893 early stop at epoch: 13 Train loss: 0.2544256 Test loss: 0.3178141 final training on all 3 1703 sequence for training epoch: 3 Train loss: 0.33419 epoch: 6 Train loss: 0.3344037 epoch: 9 Train loss: 0.3277188 epoch: 12 Train loss: 0.3307849 epoch: 15 Train loss: 0.3321109 epoch: 18 Train loss: 0.3288007 epoch: 21 Train loss: 0.3293982 epoch: 24 Train loss: 0.3310115 epoch: 27 Train loss: 0.3331793 epoch: 30 Train loss: 0.3361465 variational model based on normal latent distribution with 144 tensors and 8190 parameters proteus: 878.816 sec elapsed date and value gaps filled with kalman imputation block 1 801 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.329191 Test loss: 0.3316119 epoch: 6 Train loss: 0.3318581 Test loss: 0.3305716 epoch: 9 Train loss: 0.3283606 Test loss: 0.3299313 epoch: 12 Train loss: 0.3290748 Test loss: 0.3316176 epoch: 15 Train loss: 0.3282819 Test loss: 0.3295852 epoch: 18 Train loss: 0.329995 Test loss: 0.3343516 early stop at epoch: 18 Train loss: 0.3428083 Test loss: 0.3273482 block 2 1602 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.327451 Test loss: 0.3306193 epoch: 6 Train loss: 0.3263926 Test loss: 0.3322858 epoch: 9 Train loss: 0.329082 Test loss: 0.3326322 epoch: 12 Train loss: 0.3278613 Test loss: 0.3298986 early stop at epoch: 14 Train loss: 0.3240155 Test loss: 0.3307622 final training on all 3 2403 sequence for training epoch: 3 Train loss: 0.3306837 epoch: 6 Train loss: 0.3286098 epoch: 9 Train loss: 0.3302987 epoch: 12 Train loss: 0.3308404 epoch: 15 Train loss: 0.3316363 epoch: 18 Train loss: 0.3305579 epoch: 21 Train loss: 0.3296561 epoch: 24 Train loss: 0.3288558 epoch: 27 Train loss: 0.3285954 epoch: 30 Train loss: 0.3292858 variational model based on normal latent distribution with 144 tensors and 60670 parameters proteus: 1679.563 sec elapsed [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ── Error: 'workers >= 1' is not TRUE Backtrace: ▆ 1. └─proteus::proteus_random_search(...) at test-main.R:44:13 2. └─future::plan(...) 3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init) 4. └─future (local) plan_init() 5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE) 6. └─future (local) strategy(..., workers = workers, envir = envir) 7. └─future:::stop_if_not(...) 8. └─future:::stopf(...) [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64