Last updated on 2025-09-14 09:49:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.70 | 260.40 | 274.10 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.16 | 210.32 | 221.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 336.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 195.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 187.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/131s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.049, elapsed: 2.491 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.990, system: 0.146, elapsed: 13.266 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.014, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.850, system: 0.249, elapsed: 6.860 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.006, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.262, system: 0.485, elapsed: 24.020 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.573, system: 0.063, elapsed: 2.648 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.199, system: 0.237, elapsed: 16.503 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.016, elapsed: 0.527 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.759, system: 0.206, elapsed: 8.166 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.006, elapsed: 0.286 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.413, system: 0.554, elapsed: 29.207 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.715, system: 0.072, elapsed: 2.628 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.247, system: 0.279, elapsed: 14.098 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.016, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.899, system: 0.298, elapsed: 5.860 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.010, elapsed: 0.301 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.194, system: 0.246, elapsed: 1.227 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.044, system: 0.958, elapsed: 25.389 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.697, system: 0.087, elapsed: 2.449 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.251, system: 0.330, elapsed: 14.411 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.367 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.671, system: 0.188, elapsed: 6.286 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.237 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.307, system: 0.496, elapsed: 19.232 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.918, system: 1.161, elapsed: 44.220 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.547, system: 0.046, elapsed: 2.495 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.972, system: 0.081, elapsed: 15.375 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.323 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.650, system: 0.193, elapsed: 6.001 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.231 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.039, system: 0.355, elapsed: 25.266 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.028, elapsed: 2.366 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.919, system: 0.089, elapsed: 13.775 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.203 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.573, system: 0.167, elapsed: 4.731 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.010, elapsed: 0.289 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.866, system: 0.332, elapsed: 22.154 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.527, system: 0.037, elapsed: 2.564 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.944, system: 0.083, elapsed: 14.417 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.483, system: 0.164, elapsed: 8.252 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.011, elapsed: 0.349 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.071, system: 0.247, elapsed: 1.217 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.006, system: 0.580, elapsed: 28.083 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.031, elapsed: 2.711 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.971, system: 0.065, elapsed: 14.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.403 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.576, system: 0.166, elapsed: 4.987 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.233 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.147, system: 0.511, elapsed: 15.566 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.203, system: 0.814, elapsed: 39.154 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64