Last updated on 2025-11-03 09:49:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 244.69 | 257.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.68 | 268.38 | 279.06 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 199.00 | 213.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 182.00 | 195.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/149s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.673, system: 0.076, elapsed: 2.611 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.828, system: 0.360, elapsed: 14.313 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.023, elapsed: 0.325 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.121, system: 0.328, elapsed: 5.747 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.009, elapsed: 0.217 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.581, system: 0.835, elapsed: 24.078 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.752, system: 0.107, elapsed: 2.461 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.635, system: 0.229, elapsed: 20.737 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.013, elapsed: 0.724 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.977, system: 0.175, elapsed: 11.819 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.521 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.302, system: 0.561, elapsed: 37.500 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.604, system: 0.031, elapsed: 3.691 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.445, system: 0.058, elapsed: 16.679 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.011, elapsed: 0.392 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.965, system: 0.191, elapsed: 7.426 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.007, elapsed: 0.244 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.236, system: 0.252, elapsed: 1.156 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.297, system: 0.578, elapsed: 30.966 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.029, elapsed: 2.500 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.455, system: 0.087, elapsed: 15.120 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.014, elapsed: 0.416 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.965, system: 0.202, elapsed: 6.950 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.010, elapsed: 0.304 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.807, system: 0.492, elapsed: 22.189 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.826, system: 0.868, elapsed: 48.709 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.660, system: 0.046, elapsed: 2.378 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.533, system: 0.098, elapsed: 13.619 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.014, elapsed: 0.366 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.860, system: 0.188, elapsed: 6.124 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.009, elapsed: 0.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.987, system: 0.380, elapsed: 23.683 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.683, system: 0.042, elapsed: 2.428 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.475, system: 0.116, elapsed: 12.925 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.262 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.838, system: 0.176, elapsed: 4.977 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.008, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.921, system: 0.391, elapsed: 21.565 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.683, system: 0.046, elapsed: 2.642 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.422, system: 0.093, elapsed: 11.595 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.702, system: 0.154, elapsed: 5.789 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.010, elapsed: 0.536 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.146, system: 0.255, elapsed: 1.952 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.975, system: 0.606, elapsed: 23.880 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.032, elapsed: 4.049 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.470, system: 0.087, elapsed: 14.504 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.012, elapsed: 0.341 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.828, system: 0.179, elapsed: 6.745 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.299 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.812, system: 0.528, elapsed: 20.805 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.696, system: 0.868, elapsed: 48.073 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64