Last updated on 2025-07-07 09:50:22 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 13.96 | 194.30 | 208.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.58 | 253.97 | 264.55 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 365.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 178.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 186.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 173.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 232.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.046, elapsed: 2.195 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.028, system: 0.130, elapsed: 11.623 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.015, elapsed: 0.379 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.760, system: 0.195, elapsed: 4.990 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.242 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.201, system: 0.412, elapsed: 20.246 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.496, system: 0.036, elapsed: 2.096 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.877, system: 0.069, elapsed: 11.812 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.874, system: 0.171, elapsed: 6.820 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.328 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.138, system: 0.318, elapsed: 22.243 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.033, elapsed: 2.744 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.987, system: 0.075, elapsed: 16.829 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.724, system: 0.175, elapsed: 6.169 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.228 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.130, system: 0.224, elapsed: 1.209 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.309, system: 0.559, elapsed: 28.658 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.032, elapsed: 2.512 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.023, system: 0.071, elapsed: 14.325 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.820, system: 0.189, elapsed: 5.535 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.007, elapsed: 0.240 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.174, system: 0.483, elapsed: 17.908 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.487, system: 0.821, elapsed: 41.806 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.047, elapsed: 1.805 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.673, system: 0.069, elapsed: 9.229 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.016, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.411, system: 0.170, elapsed: 3.663 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.002, elapsed: 0.160 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.494, system: 0.322, elapsed: 15.766 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.393, system: 0.025, elapsed: 1.422 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.929, system: 0.075, elapsed: 12.493 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.364 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.607, system: 0.176, elapsed: 6.191 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.257 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.806, system: 0.308, elapsed: 21.543 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.609, system: 0.032, elapsed: 2.678 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.058, system: 0.087, elapsed: 15.866 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.276 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.556, system: 0.184, elapsed: 6.256 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.238 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.085, system: 0.264, elapsed: 1.101 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.289, system: 0.604, elapsed: 27.468 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.511, system: 0.031, elapsed: 2.036 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.015, system: 0.067, elapsed: 13.333 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.458 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.673, system: 0.193, elapsed: 8.943 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.355 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.145, system: 0.450, elapsed: 19.311 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.335, system: 0.786, elapsed: 45.669 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64