Last updated on 2025-03-22 08:53:18 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.2 | 4.00 | 56.30 | 60.30 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.2 | 2.93 | 43.90 | 46.83 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.2 | 96.80 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.2 | 109.79 | ERROR | |||
| r-devel-macos-arm64 | 0.1.2 | 51.00 | OK | |||
| r-devel-macos-x86_64 | 0.1.2 | 103.00 | OK | |||
| r-devel-windows-x86_64 | 0.1.2 | 6.00 | 103.00 | 109.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.2 | 4.08 | 56.60 | 60.68 | ERROR | |
| r-release-linux-x86_64 | 0.1.2 | 2.96 | 54.50 | 57.46 | ERROR | |
| r-release-macos-arm64 | 0.1.2 | 46.00 | OK | |||
| r-release-macos-x86_64 | 0.1.2 | 89.00 | OK | |||
| r-release-windows-x86_64 | 0.1.2 | 8.00 | 82.00 | 90.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.2 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.2 | 79.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.2 | 7.00 | 96.00 | 103.00 | ERROR |
Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘hacksig.Rmd’ using rmarkdown
Quitting from hacksig.Rmd:215-225 [unnamed-chunk-19]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `msigdbr()`:
! Unknown subcollection.
---
Backtrace:
▆
1. ├─... %>% deframe()
2. ├─tibble::deframe(.)
3. ├─dplyr::mutate(., genes = map(genes, compose(as_vector, unname)))
4. ├─tidyr::nest(., genes = c(gene_symbol))
5. ├─dplyr::distinct(., gs_name, gene_symbol)
6. └─msigdbr::msigdbr(species = "Homo sapiens", subcategory = "KEGG")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'hacksig.Rmd' failed with diagnostics:
Unknown subcollection.
--- failed re-building ‘hacksig.Rmd’
SUMMARY: processing the following file failed:
‘hacksig.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘hacksig.Rmd’ using rmarkdown
Quitting from hacksig.Rmd:215-225 [unnamed-chunk-19]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `msigdbr()`:
! Unknown subcollection.
---
Backtrace:
▆
1. ├─... %>% deframe()
2. ├─tibble::deframe(.)
3. ├─dplyr::mutate(., genes = map(genes, compose(as_vector, unname)))
4. ├─tidyr::nest(., genes = c(gene_symbol))
5. ├─dplyr::distinct(., gs_name, gene_symbol)
6. └─msigdbr::msigdbr(species = "Homo sapiens", subcategory = "KEGG")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'hacksig.Rmd' failed with diagnostics:
Unknown subcollection.
--- failed re-building ‘hacksig.Rmd’
SUMMARY: processing the following file failed:
‘hacksig.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64