7b0e560f9fcfef5f23d0485025534c70 *DESCRIPTION
816985561c0721559b0ed1c62992c428 *NAMESPACE
0d048d493175b0571ff7619bfc522c79 *R/Betadist.R
d721731bb8fedd251237e730f03be821 *R/R6Model.R
2e775903054dabe038d3bdd77fa8ef0e *R/R6covariance.R
bf05376bbbfaf75a7360bfa89008d44a *R/R6meanfunction.R
329cb536073a29547869edc77e35083a *R/RcppExports.R
5f3cc530b47e823ec3798df0f9257d09 *R/extrafunctions.R
94e8c931b5c5aaff79646a1d1afc209c *R/lme4_functions.R
b8c5ef948149f02c5f7cf8cc3a66b6d9 *R/model_s3_functions.R
5e389abde8df9ddbd031e9ebd1606ec7 *R/nelder.R
bd4287bd989d8e3511a0035abd87b3a5 *R/printfunctions.R
23c0fc36c295d531ef891befb05f1a2a *R/quantiledist.R
f54667170dd61fbceea864ddde8a6871 *R/stanmodels.R
28217efc6cc4ca1d78a3ca5b7877e374 *build/partial.rdb
7e297a31e37e77c201a2bacff2f979eb *configure
845efca43973cdde1a6174faf1d88e99 *configure.win
207f0bfae6393e3a185e8c61ae7526b2 *data/Salamanders.rda
0d6638fede562bd7ebf61e34253199b3 *data/SimGeospat.rda
d0b0353a56cd257720885281d7dd96c1 *data/SimTrial.rda
58614da8a498d17367a09083ff35eac3 *inst/cmdstan/mcml.stan
9d1acf56d3bd28c3d9748ff4c5ec9826 *inst/include/glmmr.h
fd3e43ad99bdb3ae110a1d59bb7e0d9c *inst/include/glmmr/algo.h
72e1921ee33cb73a00243014e37e64c9 *inst/include/glmmr/calculator.hpp
de2052284ee55e2e041a221dbf7b496f *inst/include/glmmr/covariance.hpp
133a19d7ffb41085705c7b63c473b615 *inst/include/glmmr/family.hpp
2df523d81729406a9874a4b0c3a11d62 *inst/include/glmmr/formula.hpp
eda836099fbcfc28d332a35f3db59125 *inst/include/glmmr/formulaparse.h
03e55f7e3d91a87be88934f222ca7a11 *inst/include/glmmr/general.h
1e0b3bfac886c70b6701d00d091c81e4 *inst/include/glmmr/griddata.hpp
170be2c9567aada826dead075061fbfc *inst/include/glmmr/hsgpcovariance.hpp
48d92a0d941f88638cb5b1011bbfd801 *inst/include/glmmr/instructions.h
5a3de94a4bf82dafbfa8e15962feb5f2 *inst/include/glmmr/interpreter.h
9f16341d65828d78815e5e24d294e1da *inst/include/glmmr/linearpredictor.hpp
a66566da197cf45826b22c5607cb9461 *inst/include/glmmr/maths.h
0c2ea751785ae43e713f1039ff0d8a83 *inst/include/glmmr/matrixfield.h
5bdbad745b468dfcf4b132360b6e6d1b *inst/include/glmmr/matrixw.hpp
19de9bc85f5d52600e523201ca965007 *inst/include/glmmr/model.hpp
a01cca3ed5dd2d90207dff82e27f0bc8 *inst/include/glmmr/modelbits.hpp
2419fbdab2c76249aae80e362dbb3733 *inst/include/glmmr/modelextradata.hpp
f40477c6529d8e42032a8f9eadaf084d *inst/include/glmmr/modelmatrix.hpp
4c502fb30162abea3b4ffa9c5b6fa1f5 *inst/include/glmmr/modelmcmc.hpp
e400f1b7bf743a93b86a6a0c72594b50 *inst/include/glmmr/modeloptim.hpp
1d8931c02264d7bf5cc25202ee82f255 *inst/include/glmmr/nngpcovariance.hpp
9feb22830ca93fb5df92d6b68c76be51 *inst/include/glmmr/openmpheader.h
c8a37ebeb4443b6316dbe0a08d689875 *inst/include/glmmr/optim/bobyqa_algo.h
7f2cba9529cd0f24a012ee77a7fb1e88 *inst/include/glmmr/optim/bobyqa_general.h
acd4cd6abf5222ba991a1ba03101d976 *inst/include/glmmr/optim/lbfgs.h
a9abb21d029983e1421e05a97800d3b3 *inst/include/glmmr/optim/lbfgs/BFGSMat.h
c7e3d7c0ae3cf539560902a0bba47fe9 *inst/include/glmmr/optim/lbfgs/BKLDLT.h
7bc542ebae65f198cc31696e1ee112ed *inst/include/glmmr/optim/lbfgs/Cauchy.h
b998f47218cea0cfa5b600c8affa6081 *inst/include/glmmr/optim/lbfgs/LineSearchBacktracking.h
5e11d707754dc06054349246d4965c21 *inst/include/glmmr/optim/lbfgs/LineSearchBracketing.h
a03b27fae4bfb3bdc6c108283f9fa7ab *inst/include/glmmr/optim/lbfgs/LineSearchMoreThuente.h
35488847d79a40d60d040d9ef6cead29 *inst/include/glmmr/optim/lbfgs/LineSearchNocedalWright.h
d00c7cf76a0838299c9da38395716fe5 *inst/include/glmmr/optim/lbfgs/Param.h
b34ff8806dfc88aaae0c37d9a181772b *inst/include/glmmr/optim/lbfgs/SubspaceMin.h
b0ae3b167724e295a454fddd7ac336c6 *inst/include/glmmr/optim/lbfgsb.h
026bd5552ed5ef84ee91462b22be98b5 *inst/include/glmmr/optim/newuoa.h
0860c81c1c183e2914f47a2fadf10a01 *inst/include/glmmr/optim/newuoa_impl.h
7899dcee35e9c3df1607e050a41d4f19 *inst/include/glmmr/optim/optim.h
3f8af65ef08d491294140101c7a87455 *inst/include/glmmr/randomeffects.hpp
e083ad81e7dbec61fa2591dcbc506b4f *inst/include/glmmr/sparse.h
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
2ac02033af196352a7b7d7a8681a74d6 *inst/stan/include/license.stan
f4dbc976a578ad17c3ef7aba8d1b679d *inst/stan/mcml.stan
db147c6285de88a4f90cffa8bfb8938e *man/Beta.Rd
12db242328b2b1ba15e8f580b1ad4d32 *man/Covariance.Rd
ec59cfee00e92e306928768b647acb05 *man/MeanFunction.Rd
d2b48df27f3de0d72b68bee3f34879c1 *man/Model.Rd
abf2a8263c0f63f4c2c99b26907338a7 *man/Quantile.Rd
002e99cf9dbe93c84a0d22533ffa14f0 *man/Salamanders.Rd
6463bf8665b6e18534cbfeeb4533133f *man/SimGeospat.Rd
903125df25988abae51c553780f3f6d1 *man/SimTrial.Rd
f6d06d6f273e546b80c3de336d8f9408 *man/coef.Model.Rd
0732f1dc7044e39e96a9a450f5954af6 *man/coef.mcml.Rd
db5a9e44a93f2f44aecea53db0360638 *man/confint.mcml.Rd
f1484366d67230f928b25ec32316f332 *man/cross_df.Rd
eaaebc7d1b25327b100227d81bf40562 *man/cycles.Rd
b22286d99d95e0b02eecbac35e309e49 *man/family.Model.Rd
c76e5ae0b361231370c475f622fb16bf *man/family.mcml.Rd
d9f704d080d7a8bc37f73464c72acec8 *man/fitted.Model.Rd
a49e66548db922b5cc1741e1b79eb17c *man/fitted.mcml.Rd
246a05d4c8d88a414c34f166d22a9d25 *man/fixed.effects.Rd
4b02bb293976352ed46f6ec86746bd8a *man/formula.Model.Rd
c81126a9de798ba6a8fdd1956c85812d *man/formula.mcml.Rd
319a928a62e0512375f595536b8660fb *man/glmmrBase-package.Rd
66977fed8883ed785b64c382dbbf3b29 *man/hessian_from_formula.Rd
7323573181d59c26780e0225435ddcd8 *man/hsgp_rescale.Rd
acdc3ff6a4eb67050d37567fcd1ef3cf *man/lme4_to_glmmr.Rd
0870c642fc151a0593f2cb42132ffe4b *man/logLik.Model.Rd
fba01b599ca0a8a50f6db03d13b0a966 *man/logLik.mcml.Rd
6faba21bb214f21048655975a3e3f561 *man/match_rows.Rd
b7640c22c9e2e49185248c9c953ab3b5 *man/mcml_glmer.Rd
756f20748b9c29d10d142c4846c00038 *man/mcml_lmer.Rd
ddc38be4ca68bd6cf18c2988f4916805 *man/mcnr_family.Rd
a778e627b8f69d614ae3fea10a933c68 *man/nelder.Rd
fa4335692e3032c30fd114dcbbae2ee6 *man/nest_df.Rd
14009b18fba04d00b1cedc5610f3cdb5 *man/predict.Model.Rd
61d14bec57a5312e183f5450d7dad89d *man/predict.mcml.Rd
007887a487e468ed4795b88b812c3cb4 *man/print.mcml.Rd
12ce82bc289ce88556f3d1f6fe64f5fe *man/progress_bar.Rd
43986cf4b2ccffbfe3f4806793f86ef6 *man/random.effects.Rd
e9d34147e85ddf8ec8f0d576a34df3e6 *man/residuals.Model.Rd
cf4361d05c05e9ccb92a8c30406c59cf *man/residuals.mcml.Rd
eadfb8c68018ba3c7520093a93952b8a *man/setParallel.Rd
9e882cc1c07be729562173210ae155b6 *man/summary.Model.Rd
6c7821cb72efde8f071ee7479a9e12f8 *man/summary.mcml.Rd
9e95caeb4eaa23283ad4c89620532e54 *man/vcov.Model.Rd
ac5a5e311702629b731253f93724815f *man/vcov.mcml.Rd
f8a460bdd44bc05a033b9fd8e5301265 *src/Makevars
1260f0be707c2cfae25bf59fd5e495db *src/Makevars.win
2fb86c97f75e6846c7141d4ae147404f *src/RcppExports.cpp
e6f7c0bd4b48eb0aad5b5b9ffd04151b *src/model_module.cpp
6eb4d80871d0bbf1369074979df9e186 *src/stanExports_mcml.cc
ae409776c358e348c4c7b92d299adb05 *src/stanExports_mcml.h
