038d2cf11c894dd0b904a5510e370e3c *DESCRIPTION
2f0fe80f45c03c0cc84bc57f93181bf7 *NAMESPACE
2f55b51439c341e3e7436545b97bdd27 *R/AdjustMatrix.R
43d34d435c07e99c9c5626779994a054 *R/Classes.R
5d59606a007daa35002fa9884be536c0 *R/CompareMethodsNodeOrdering.R
8064da88af11fc0c17cf47546afe97de *R/CompareMethodsVStructure.R
b70699730987e977c3adfb11349f75e0 *R/CutModules.R
9fbf7975aa44888d917f991684a44432 *R/EdgeOrientation.R
05361fa6c922d22a79deaedff1993a08 *R/IdentifyAssociatedPCs.R
8ac833437b4febb57bc2549ae7ac30ee *R/MRPC.R
51a6002b5e7500e48a707ad7a2890bff *R/ModiSkeleton.R
c1cd52c965ba6a0f391b3c2547b2aa0e *R/PlotDendrogram.R
8d2baff028167736cf98b6d3cd9e21c4 *R/PlotGraphWithModules.R
cdd3648a33064d1265dd517609579de9 *R/RecallPrecision.R
b132ed5ce2e57430bd25a4f0ae05d469 *R/RobustCor.R
f3f92c6e935cf0238cac0db97eebeb16 *R/SeqFDR.R
5f0e8d3963847c9e9bd7d4d50429866a *R/SimulateData.R
473ca3d9a094a31502f37750ae257f1a *R/SimulateData1P.R
27c29130f313a94a1041069e684228d1 *R/SimulateData2P.R
c7bc8b2da1957df50a25673964d4484f *R/SimulateData3P.R
10a0b731420e68213f31d08cad4ef42b *R/SimulateDataNP.R
45f0255f9b703c3ea6d319020de56ac3 *R/aSHD.R
21fdabc0b0a32e4c8c0ba58342ac7093 *R/addis.R
71ecb09b63a2035972e72ce93e17b129 *R/empty.R
41e50fe4bae8c7f73394ef267dc21a21 *R/imports.R
c67675aac75e87d2b847ccf7e2723a9c *R/mpinv.r
11abcd572c095943deabe1847cd9b6ea *R/seqDiff.R
e6e4c0adb31d1df9d81aa1552a32e999 *README.md
498df0587b8d2b1db92a2bb89791eba3 *data/Data_GEUVADIS.rda
e3d6805ad692b2c9a8e4830c905355bc *data/MRPCtruth.rda
135a604c68d585825832756a817fb002 *data/data_GEUVADIS_combined.rda
0add230b7ddcd87a7be682b69ece43ec *data/data_examples.rda
a3045bf405e75e40a09d1a7e070f6192 *data/data_with_outliers.rda
b57db13333ab82d1eb68a6f8037f0377 *data/data_without_outliers.rda
5c64b19ce1223d50311ee20a2d9b437f *data/simu_data_M0.rda
36e391fe6e409caca045dab7851a6cc0 *data/simu_data_M1.rda
ad3283b0b7f4c8a78bdf27c084365cad *data/simu_data_M2.rda
2eaf9a9616437822ed082bf1239b0489 *data/simu_data_M3.rda
c8a1f4f012cca0255b76cd3a49adbd35 *data/simu_data_M4.rda
2bdde4cb67110b0fe3c08a8d26ba792e *data/simu_data_layered.rda
b0c8a4f8622bd27533ac226c934d9f78 *data/simu_data_multiparent.rda
a165a4bbe0bc3df12bfc51f7ee1b5962 *data/simu_data_starshaped.rda
08dc2e9bec93a42ac18d3c7b55635911 *man/AdjustMatrix.Rd
cd1e2b765e9c767d3a10906ee7e68f49 *man/CompareMethodsNodeOrdering.Rd
f206fc60511f1881040b14df2ddf952e *man/CompareMethodsVStructure.Rd
9b504a44bf93a84f57aaf4900357f1f4 *man/CutModules.Rd
e7a9027ed6bff1e259119f3426425540 *man/Data_GEUVADIS.Rd
718bffc9077305015f63a35c6c401a97 *man/EdgeOrientation.Rd
2b69165a1ee11bb8ee7bcf53422870e3 *man/IdentifyAssociatedPCs.Rd
a1ec01c3bff2cf8bb3fc0abb8a0dbb3a *man/MRPC.Rd
643680c2f0674a53d3b5e59876bc1b24 *man/MRPCclass.Rd
20e54ed5460af15e247f90cfadd51a26 *man/MRPCtruth.Rd
a4ae2819954c170ac0b306fa6b189b8d *man/ModiSkeleton.Rd
cf6ef843ad67979dbb87ec628792184d *man/PlotDendrogram.Rd
3d15edb68a2b40da0e30278f18ddaa80 *man/PlotGraphWithModules.Rd
b2e8e7061aa01a12f28f1c06ed0c235c *man/RecallPrecision.Rd
0388952c9b3a3a5f40dab258b17ebfd3 *man/RobustCor.Rd
ae19febde5c074ee741180330de08495 *man/SeqFDR.Rd
e0a16c3d3dd6146955a8cb5dfe7491d0 *man/SimulateData.Rd
41d61b85124ecc75e81a9a75aace43ed *man/SimulateData1P.Rd
4ef4609f131989bd7b873fba1e339cec *man/SimulateData2P.Rd
ecb45cffdc042f198d21d05a8fe1a938 *man/SimulateData3P.Rd
cdb816dda303934dc4477d1c57eadf90 *man/SimulateDataNP.Rd
98c8a09388fe46a94f6a0932eae96236 *man/aSHD.Rd
0349ad9a0362b968ff66c13d31e1f7f7 *man/data_GEUVADIS_combined.Rd
54828c2fceac82dd506ef70f4078d5db *man/data_examples.Rd
e5012d3c44b0059555eeae72ceb66e43 *man/data_with_outliers.Rd
05ba28f920f15731c8a758f6d1e6fd67 *man/data_without_outliers.Rd
d66c09ebeb6d8f102ec58bc6379889ae *man/empty.Rd
b8ac265bdfa7f593c34f19e916c416e5 *man/mpinv.Rd
1522baf571ba7596367d3eac30f8836a *man/seqDiff.Rd
3de04a33e8bdf327cb458131975f16bf *man/simu_data_M0.Rd
bd85173695478ce6300b5d2373bf92b1 *man/simu_data_M1.Rd
8c768d228db1731307b9428c8734730d *man/simu_data_M2.Rd
8bd79a6c9b2eb8b26019671f06e4b37d *man/simu_data_M3.Rd
9507a4b048a8d24fc9973739033630ac *man/simu_data_M4.Rd
a93f7557881aab1ac1068247de202da3 *man/simu_data_layered.Rd
abcf372152b1fa7857b606c9836c8d6f *man/simu_data_multiparent.Rd
54e4282940d4bfde40dd8432af816887 *man/simu_data_starshaped.Rd
