Last updated on 2025-07-09 09:50:41 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.67 | 236.91 | 250.58 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.25 | 203.87 | 215.12 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.93 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 176.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 184.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 166.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.531, system: 0.054, elapsed: 2.048 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.007, system: 0.118, elapsed: 11.436 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.713, system: 0.196, elapsed: 4.670 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.155, system: 0.410, elapsed: 19.476 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.527, system: 0.040, elapsed: 2.298 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.093, system: 0.106, elapsed: 12.064 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.014, elapsed: 0.262 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.763, system: 0.168, elapsed: 5.953 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.311 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.290, system: 0.354, elapsed: 21.690 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.038, elapsed: 2.686 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.060, system: 0.087, elapsed: 16.954 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.013, elapsed: 0.519 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.784, system: 0.189, elapsed: 10.497 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.449 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.155, system: 0.207, elapsed: 2.080 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.560, system: 0.564, elapsed: 34.702 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.467, system: 0.029, elapsed: 3.844 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.095, system: 0.065, elapsed: 16.259 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.768, system: 0.174, elapsed: 5.824 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.237 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.295, system: 0.454, elapsed: 14.707 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.637, system: 0.767, elapsed: 42.505 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.485, system: 0.044, elapsed: 1.617 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.404, system: 0.063, elapsed: 8.698 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.012, elapsed: 0.197 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.521, system: 0.183, elapsed: 4.134 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.005, elapsed: 0.216 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.243, system: 0.324, elapsed: 15.410 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.602, system: 0.052, elapsed: 2.201 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.150, system: 0.129, elapsed: 14.978 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.262 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.604, system: 0.173, elapsed: 5.038 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.004, elapsed: 0.174 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.239, system: 0.396, elapsed: 23.424 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.032, elapsed: 2.117 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.956, system: 0.071, elapsed: 21.460 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.436 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.568, system: 0.166, elapsed: 6.885 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.289 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.068, system: 0.251, elapsed: 1.154 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.139, system: 0.556, elapsed: 33.445 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.488, system: 0.028, elapsed: 2.499 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.981, system: 0.053, elapsed: 12.585 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.456, system: 0.158, elapsed: 4.582 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.006, elapsed: 0.224 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.003, system: 0.433, elapsed: 13.818 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.926, system: 0.717, elapsed: 34.950 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64