Last updated on 2025-09-16 09:49:35 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.70 | 260.40 | 274.10 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.80 | 255.61 | 266.41 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 309.63 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 187.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 181.00 | 200.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 181.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.471, system: 0.043, elapsed: 2.020 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.973, system: 0.158, elapsed: 12.174 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.014, elapsed: 0.227 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.680, system: 0.209, elapsed: 4.342 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.006, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.014, system: 0.457, elapsed: 19.765 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.044, elapsed: 1.888 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.085, system: 0.225, elapsed: 12.716 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.318 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.957, system: 0.271, elapsed: 6.397 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.007, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.405, system: 0.592, elapsed: 22.335 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.693, system: 0.081, elapsed: 2.659 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.170, system: 0.246, elapsed: 17.512 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.016, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.958, system: 0.286, elapsed: 6.961 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.008, elapsed: 0.242 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.176, system: 0.239, elapsed: 1.172 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.951, system: 0.907, elapsed: 29.815 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.709, system: 0.088, elapsed: 2.842 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.291, system: 0.286, elapsed: 14.282 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.341 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.851, system: 0.297, elapsed: 5.760 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.010, elapsed: 0.267 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.551, system: 0.723, elapsed: 21.990 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.401, system: 1.461, elapsed: 46.519 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/115s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.764, system: 0.096, elapsed: 2.692 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.854, system: 0.172, elapsed: 10.316 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.175, system: 0.013, elapsed: 0.189 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.398, system: 0.216, elapsed: 3.929 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.007, elapsed: 0.178 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.869, system: 0.527, elapsed: 18.030 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.600, system: 0.070, elapsed: 1.862 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.141, system: 0.263, elapsed: 13.834 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.012, elapsed: 0.393 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.490, system: 0.161, elapsed: 4.803 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.002, elapsed: 0.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.090, system: 0.536, elapsed: 21.873 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.048, elapsed: 2.189 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.903, system: 0.077, elapsed: 16.629 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.330 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.579, system: 0.165, elapsed: 6.037 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.013, elapsed: 0.240 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.025, system: 0.238, elapsed: 0.835 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.079, system: 0.588, elapsed: 27.157 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.457, system: 0.030, elapsed: 1.958 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.963, system: 0.064, elapsed: 13.271 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.486, system: 0.163, elapsed: 5.153 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.007, elapsed: 0.327 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.974, system: 0.450, elapsed: 17.505 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.899, system: 0.755, elapsed: 39.385 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64