Last updated on 2025-10-21 09:48:26 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.9 | 17.35 | 78.77 | 96.12 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.1.9 | 13.11 | 56.62 | 69.73 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.1.9 | 143.80 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.9 | 160.04 | NOTE | |||
| r-devel-windows-x86_64 | 2.1.9 | 26.00 | 109.00 | 135.00 | NOTE | |
| r-patched-linux-x86_64 | 2.1.9 | 21.38 | 74.74 | 96.12 | NOTE | |
| r-release-linux-x86_64 | 2.1.9 | 18.70 | 74.42 | 93.12 | NOTE | |
| r-release-macos-arm64 | 2.1.9 | 54.00 | NOTE | |||
| r-release-macos-x86_64 | 2.1.9 | 93.00 | NOTE | |||
| r-release-windows-x86_64 | 2.1.9 | 29.00 | 115.00 | 144.00 | NOTE | |
| r-oldrel-macos-arm64 | 2.1.9 | 51.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 2.1.9 | 74.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 2.1.9 | 34.00 | 131.00 | 165.00 | NOTE |
Version: 2.1.9
Check: Rd files
Result: NOTE
checkRd: (-1) getPathToAttractor.Rd:23: Lost braces; missing escapes or markup?
23 | Specifies whether the actual attractor states are included in the resulting table or not. If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. This corresponds to the behaviour prior to \pkg{BoolNet} version 1.5. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state. In this case, the sequence can be empty if the start state is an attractor state.
| ^
checkRd: (-1) plotSequence.Rd:42: Lost braces; missing escapes or markup?
42 | Specifies whether the actual attractor states are included in the plot or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) sequenceToLaTeX.Rd:37: Lost braces; missing escapes or markup?
37 | Specifies whether the actual attractor states are included in the table or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) simulateSymbolicModel.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:66-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:72-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) testNetworkProperties.Rd:131: Lost braces; missing escapes or markup?
131 | If {perturb="functions"} or \code{perturb="transitions"} and \code{accumulate=FALSE}, the function returns a vector of percentages of original attractors found in each of the perturbed copies of the original network. If \code{accumulate=TRUE}, the function returns the overall percentage of original attractors found in all perturbed copies.
| ^
checkRd: (-1) testNetworkProperties.Rd:140: Lost braces
140 | code{params} can hold parameters \code{numSamples, flipBits} corresponding to the parameters of \code{\link{perturbTrajectories}} that define how many initial states are drawn and how many bits are flipped.
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.1.9
Check: top-level files
Result: NOTE
Found the following validation problem for the NEWS.Rd HTML conversion:
NEWS.html:311:1 (inst/NEWS.Rd:196): Warning: missing </ul> before </div>
NEWS.html:76:1 (inst/NEWS.Rd:37): Warning: <h4> anchor "Modified-functions" already defined
NEWS.html:91:1 (inst/NEWS.Rd:46): Warning: <h4> anchor "Modified-functions" already defined
NEWS.html:122:1 (inst/NEWS.Rd:65): Warning: <h4> anchor "Modified-functions" already defined
NEWS.html:155:1 (inst/NEWS.Rd:90): Warning: <h4> anchor "Modified-functions" already defined
NEWS.html:176:1 (inst/NEWS.Rd:104): Warning: <h4> anchor "Modified-functions" already defined
NEWS.html:194:1 (inst/NEWS.Rd:116): Warning: <h4> anchor "Modified-functions" already defined
NEWS.html:212:1 (inst/NEWS.Rd:129): Warning: <h4> anchor "New-functions" already defined
NEWS.html:226:1 (inst/NEWS.Rd:140): Warning: <h4> anchor "Modified-functions" already defined
NEWS.html:241:1 (inst/NEWS.Rd:151): Warning: <h4> anchor "Modified-functions" already defined
NEWS.html:259:1 (inst/NEWS.Rd:164): Warning: <h4> anchor "New-functions" already defined
NEWS.html:279:1 (inst/NEWS.Rd:178): Warning: <h4> anchor "Modified-functions" already defined
Flavor: r-devel-linux-x86_64-debian-gcc