Analysis of Geostatistical Data
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Documentation for package ‘geoR’ version 1.9-5
Help Pages
A B C D E F G H I J K L M N O P R S T V W X Z misc
-- A --
| as.data.frame.geodata | Converts an Object to the Class "geodata" |
| as.geodata | Converts an Object to the Class "geodata" |
| as.geodata.default | Converts an Object to the Class "geodata" |
| as.geodata.geodata.frame | Converts an Object to the Class "geodata" |
| as.geodata.SpatialPointsDataFrame | Converts an Object to the Class "geodata" |
-- B --
| boot.variofit | Envelops for Empirical Variograms Based on Model Parameters |
| boxcox.geodata | Box-Cox transformation for geodata objects |
| boxcoxfit | Parameter Estimation for the Box-Cox Transformation |
-- C --
| ca20 | Calcium content in soil samples |
| camg | Calcium and magnesium content in soil samples |
| check.parameters.values | Likelihood Based Parameter Estimation for Gaussian Random Fields |
| contour.grf | Image, Contour or Perspective Plot of Simulated Gaussian Random Field |
| contour.krige.bayes | Plots Results of the Predictive Distribution |
| contour.kriging | Image or Perspective Plot with Kriging Results |
| coords.aniso | Geometric Anisotropy Correction |
| coords2coords | Operations on Coordinates |
| cov.spatial | Computes Value of the Covariance Function |
-- D --
| dboxcox | The Box-Cox Transformed Normal Distribution |
| diffpairs | Wrappers for the C functions used in geoR |
| dinvchisq | The (Scaled) Inverse Chi-Squared Distribution |
| distdiag | Defunct Functions in the Package geoR |
| dup.coords | Locates duplicated coordinates |
| dup.coords.default | Locates duplicated coordinates |
| dup.coords.geodata | Locates duplicated coordinates |
| duplicated.geodata | Locates duplicated coordinates |
-- E --
| elevation | Surface Elevations |
| eyefit | Interactive Variogram Estimation |
-- F --
| fitted.likGRF | Likelihood Based Parameter Estimation for Gaussian Random Fields |
-- G --
| gambia | Gambia Malaria Data |
| gambia.borders | Gambia Malaria Data |
| gambia.map | Gambia Malaria Data |
| geodata | Converts an Object to the Class "geodata" |
| geoRCovModels | Computes Value of the Covariance Function |
| geoRdefunct | Defunct Functions in the Package geoR |
| globalvar | Computes global variance |
| grf | Simulation of Gaussian Random Fields |
| grfclass | Simulation of Gaussian Random Fields |
-- H --
| head | Head observations in a regional confined aquifer |
| hist.krige.bayes | Plots Sample from Posterior Distributions |
| hoef | Data for spatial analysis of experiments |
-- I --
| image.grf | Image, Contour or Perspective Plot of Simulated Gaussian Random Field |
| image.krige.bayes | Plots Results of the Predictive Distribution |
| image.kriging | Image or Perspective Plot with Kriging Results |
| is.geodata | Converts an Object to the Class "geodata" |
| isaaks | Data from Isaaks and Srisvastava's book |
-- J --
| jitter2d | Jitters (duplicated) coordinates. |
| jitterDupCoords | Jitters (duplicated) coordinates. |
| jitterDupCoords.default | Jitters (duplicated) coordinates. |
| jitterDupCoords.geodata | Jitters (duplicated) coordinates. |
-- K --
| kattegat | Kattegat basin salinity data |
| krige.bayes | Bayesian Analysis for Gaussian Geostatistical Models |
| krige.control | Spatial Prediction - Conventional Kriging |
| krige.conv | Spatial Prediction - Conventional Kriging |
| krweights | Computes kriging weights |
| Ksat | Saturated Hydraulic Conductivity |
| ksline | Spatial Prediction - Conventional Kriging |
-- L --
| landim1 | Data from Landim's book |
| legend.krige | Add a legend to a image with kriging results |
| likfit | Likelihood Based Parameter Estimation for Gaussian Random Fields |
| likfit.limits | Likelihood Based Parameter Estimation for Gaussian Random Fields |
| likfit.nospatial | Defunct Functions in the Package geoR |
| likfit.old | Defunct Functions in the Package geoR |
| likfitBGCCM | Fits the bivariate Gaussian common component geostatistical model |
| lines.boxcoxfit | Parameter Estimation for the Box-Cox Transformation |
| lines.eyefit | Interactive Variogram Estimation |
| lines.grf | Simulation of Gaussian Random Fields |
| lines.variogram | Line with a Empirical Variogram |
| lines.variogram.envelope | Adds Envelopes Lines to a Variogram Plot |
| lines.variomodel | Adds a Line with a Variogram Model to a Variogram Plot |
| lines.variomodel.default | Adds a Line with a Variogram Model to a Variogram Plot |
| lines.variomodel.grf | Lines with True Variogram for Simulated Data |
| lines.variomodel.krige.bayes | Adds a Bayesian Estimate of the Variogram to a Plot |
| lines.variomodel.likGRF | Adds a Variogram Line to a Variogram Plot |
| lines.variomodel.variofit | Adds a Line with a Fitted Variogram Model to a Variogram Plot |
| locations.inside | Select prediction locations inside borders |
| loccoords | Wrappers for the C functions used in geoR |
| loglik.GRF | Log-Likelihood for a Gaussian Random Field |
| logLik.likGRF | Likelihood Based Parameter Estimation for Gaussian Random Fields |
| loglik.spatial | Defunct Functions in the Package geoR |
| loglikBGCCM | Fits the bivariate Gaussian common component geostatistical model |
-- M --
| maijun | Rainfall Data from Parana State, Brasil |
| matern | Computer Values of the Matern Correlation Function |
| model.control | Bayesian Analysis for Gaussian Geostatistical Models |
-- N --
| names.geodata | Lists names of the key elements of a geodata object |
| nearloc | Near location to a point |
-- O --
| olsfit | Defunct Functions in the Package geoR |
| output.control | Defines output options for prediction functions |
-- P --
| parana | Rainfall Data from Parana State, Brasil |
| pars.limits | Set limits for the parameter values |
| persp.grf | Image, Contour or Perspective Plot of Simulated Gaussian Random Field |
| persp.krige.bayes | Plots Results of the Predictive Distribution |
| persp.kriging | Image or Perspective Plot with Kriging Results |
| plot.1d | Image or Perspective Plot with Kriging Results |
| plot.boxcoxfit | Parameter Estimation for the Box-Cox Transformation |
| plot.eyefit | Interactive Variogram Estimation |
| plot.geodata | Exploratory Geostatistical Plots |
| plot.grf | Plots Variograms for Simulated Data |
| plot.krige.bayes | Plots Prior and/or Posterior Distributions |
| plot.proflik | Plots Profile Likelihoods |
| plot.variog4 | Plot Directional Variograms |
| plot.variogram | Plot Empirical Variogram |
| plot.xvalid | Plot Cross-Validation Results |
| points.geodata | Plots Spatial Locations and Data Values |
| polygrid | Coordinates of Points Inside a Polygon |
| post2prior | Bayesian Analysis for Gaussian Geostatistical Models |
| practicalRange | Pratical range for correlation functions |
| predict.BGCCM | Prediction for the bivariate Gaussian common component geostatistical model |
| pred_grid | Generates a 2D Prediction Grid |
| print.BGCCM | Prints an summary of of the output from likfitBGCCM. |
| print.boxcoxfit | Parameter Estimation for the Box-Cox Transformation |
| print.eyefit | Interactive Variogram Estimation |
| print.krige.bayes | Bayesian Analysis for Gaussian Geostatistical Models |
| print.likGRF | Summarizes Parameter Estimation Results for Gaussian Random Fields |
| print.posterior.krige.bayes | Bayesian Analysis for Gaussian Geostatistical Models |
| print.summary.eyefit | Interactive Variogram Estimation |
| print.summary.geodata | Summaries for geodata object |
| print.summary.likGRF | Summarizes Parameter Estimation Results for Gaussian Random Fields |
| print.summary.variofit | Summarize Results of Variogram Estimation |
| print.summary.xvalid | Cross-validation by kriging |
| print.variofit | Summarize Results of Variogram Estimation |
| prior.control | Bayesian Analysis for Gaussian Geostatistical Models |
| proflik | Computes Profile Likelihoods |
-- R --
| rboxcox | The Box-Cox Transformed Normal Distribution |
| read.geodata | Reads and Converts Data to geoR Format |
| rect.coords | Operations on Coordinates |
| resid.likGRF | Likelihood Based Parameter Estimation for Gaussian Random Fields |
| residuals.likGRF | Likelihood Based Parameter Estimation for Gaussian Random Fields |
| rinvchisq | The (Scaled) Inverse Chi-Squared Distribution |
| rongelap | Radionuclide Concentrations on Rongelap Island |
-- S --
| s100 | Simulated Data-Sets which Illustrate the Usage of the Package geoR |
| s121 | Simulated Data-Sets which Illustrate the Usage of the Package geoR |
| s256i | Simulated Data-Set which Illustrate the Usage of krige.bayes |
| sample.geodata | Sampling from geodata objects |
| sample.posterior | Samples from the posterior distribution |
| sample.prior | Sample the prior distribution |
| set.coords.lims | Sets Limits to Scale Plots |
| SIC | Spatial Interpolation Comparison data |
| sic | Spatial Interpolation Comparison data |
| sic.100 | Spatial Interpolation Comparison data |
| sic.367 | Spatial Interpolation Comparison data |
| sic.all | Spatial Interpolation Comparison data |
| sic.borders | Spatial Interpolation Comparison data |
| sic.some | Spatial Interpolation Comparison data |
| soil250 | Soil chemistry properties data set |
| soja98 | Soya bean production and other variables in a uniformity trial |
| statistics.predictive | Summary statistics from predictive distributions |
| subarea | Selects a Subarea from a Geodata Object |
| subset.geodata | Method for subsetting geodata objects |
| summary.eyefit | Interactive Variogram Estimation |
| summary.geodata | Summaries for geodata object |
| summary.likGRF | Summarizes Parameter Estimation Results for Gaussian Random Fields |
| summary.variofit | Summarize Results of Variogram Estimation |
| summary.xvalid | Cross-validation by kriging |
-- T --
| tce | TCE concentrations in groundwater in a vertical cross section |
| trend.spatial | Builds the Trend Matrix |
-- V --
| varcov.spatial | Computes Covariance Matrix and Related Results |
| varcovBGCCM | Covariance matrix for the bivariate Gaussian common component geostatistical model |
| variofit | Variogram Based Parameter Estimation |
| variog | Compute Empirical Variograms |
| variog.mc.env | Envelops for Empirical Variograms Based on Permutation |
| variog.model.env | Envelops for Empirical Variograms Based on Model Parameters |
| variog4 | Computes Directional Variograms |
-- W --
| wlsfit | Defunct Functions in the Package geoR |
| wo | Kriging example data from Webster and Oliver |
| wolf | Wolfcamp Aquifer Data |
| wolfcamp | Wolfcamp Aquifer Data |
| wrappers | Wrappers for the C functions used in geoR |
| wrc | Points of a water retention curve data set |
-- X --
| xvalid | Cross-validation by kriging |
-- Z --
| zoom.coords | Operations on Coordinates |
| zoom.coords.default | Operations on Coordinates |
| zoom.coords.geodata | Operations on Coordinates |
-- misc --
| .bilinearformXAY | Wrappers for the C functions used in geoR |
| .Ccor.spatial | Wrappers for the C functions used in geoR |
| .check.cov.model | Computes Value of the Covariance Function |
| .cor.number | Computes Value of the Covariance Function |
| .corr.diaglowertri | Wrappers for the C functions used in geoR |
| .cov012.model | Covariance matrix for the bivariate Gaussian common component geostatistical model |
| .define.bins | Compute Empirical Variograms |
| .diagquadraticformXAX | Wrappers for the C functions used in geoR |
| .dist12 | Covariance matrix for the bivariate Gaussian common component geostatistical model |
| .geoR_fullGrid | Image, Contour or Perspective Plot of Simulated Gaussian Random Field |
| .grf.aux1 | Simulation of Gaussian Random Fields |
| .ksline.aux.1 | Spatial Prediction - Conventional Kriging |
| .loss.vario | Variogram Based Parameter Estimation |
| .naiveLL.BGCCM | Fits the bivariate Gaussian common component geostatistical model |
| .negloglik.boxcox | Parameter Estimation for the Box-Cox Transformation |
| .negloglik.GRF | Likelihood Based Parameter Estimation for Gaussian Random Fields |
| .negloglikBGCCM | Fits the bivariate Gaussian common component geostatistical model |
| .nlmP | Adapts nlm for Constraints in the Parameter Values |
| .prepare.graph.krige.bayes | Plots Results of the Predictive Distribution |
| .prepare.graph.kriging | Image or Perspective Plot with Kriging Results |
| .proflik.aux0 | Computes Profile Likelihoods |
| .proflik.aux1 | Computes Profile Likelihoods |
| .proflik.aux1.1 | Computes Profile Likelihoods |
| .proflik.aux10 | Computes Profile Likelihoods |
| .proflik.aux11 | Computes Profile Likelihoods |
| .proflik.aux12 | Computes Profile Likelihoods |
| .proflik.aux13 | Computes Profile Likelihoods |
| .proflik.aux14 | Computes Profile Likelihoods |
| .proflik.aux15 | Computes Profile Likelihoods |
| .proflik.aux16 | Computes Profile Likelihoods |
| .proflik.aux17 | Computes Profile Likelihoods |
| .proflik.aux18 | Computes Profile Likelihoods |
| .proflik.aux19 | Computes Profile Likelihoods |
| .proflik.aux2 | Computes Profile Likelihoods |
| .proflik.aux20 | Computes Profile Likelihoods |
| .proflik.aux21 | Computes Profile Likelihoods |
| .proflik.aux21.1 | Computes Profile Likelihoods |
| .proflik.aux22 | Computes Profile Likelihoods |
| .proflik.aux23 | Computes Profile Likelihoods |
| .proflik.aux24 | Computes Profile Likelihoods |
| .proflik.aux27 | Computes Profile Likelihoods |
| .proflik.aux28 | Computes Profile Likelihoods |
| .proflik.aux3 | Computes Profile Likelihoods |
| .proflik.aux30 | Computes Profile Likelihoods |
| .proflik.aux31 | Computes Profile Likelihoods |
| .proflik.aux32 | Computes Profile Likelihoods |
| .proflik.aux33 | Computes Profile Likelihoods |
| .proflik.aux4 | Computes Profile Likelihoods |
| .proflik.aux5 | Computes Profile Likelihoods |
| .proflik.aux6 | Computes Profile Likelihoods |
| .proflik.aux7 | Computes Profile Likelihoods |
| .proflik.aux8 | Computes Profile Likelihoods |
| .proflik.aux9 | Computes Profile Likelihoods |
| .proflik.cov | Computes Profile Likelihoods |
| .proflik.ftau | Defunct Functions in the Package geoR |
| .proflik.lambda | Computes Profile Likelihoods |
| .proflik.main | Computes Profile Likelihoods |
| .proflik.nug | Defunct Functions in the Package geoR |
| .proflik.phi | Defunct Functions in the Package geoR |
| .proflik.plot.aux1 | Plots Profile Likelihoods |
| .rfm.bin | Compute Empirical Variograms |