# EZ-to-Use Biplots

## Documentation for package ‘biplotEZ’ version 2.2

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

alpha.bags | Create alpha bags
AoD | Use the Analysis of Distance (AoD) method to construct the biplot
AoD.biplot | Calculate elements for the Analysis of Distance (AoD) biplot
axes | Format aesthetics for the biplot axes
axes_coordinates | Calibrate Biplot Axes
biplot | First step to create a new biplot with 'biplotEZ'
biplotEZ | biplotEZ: EZ-to-Use Biplots
CA | Correspondence Analysis (CA) method
CA.biplot | CA biplot
CATPCA | Categorical Principal Component Analysis
classification | Classification biplot method
classification.biplot | classification biplot
classify | Classify samples into classes
CLPs | Format aesthetics for the category level points
CLRs | Format aesthetics for the category level regions
CVA | Perform Canonical Variate Analysis (CVA)
CVA.biplot | Calculate elements for the CVA biplot
CVAlowdim | Construct additional dimensions when the dimension of the canonical space is smaller than the dimension of the biplot
density1D | Creates a kernel density in 1-dimension
density2D | Create a density in 2-dimensions
ellipses | Concentration ellipses (kappa-ellipses)
extended.matching.coefficient | Extended matching coefficient
fit.measures | Compute measures of fit for the biplot.
interpolate | Interpolate supplementary points and variables to add to the biplot
legend.type | Format the legend for the biplot
means | Format aesthetics for the class or group means
newaxes | Format aesthetics for the supplementary (new) biplot axes
newsamples | Format aesthetics for the supplementary (new) biplot samples
PCA | Perform Principal Components Analysis (PCA)
PCA.biplot | Calculate elements for the PCA biplot
PCO | Principal Coordinate Analysis (PCO) biplot method
PCO.biplot | PCO biplot
plot.biplot | Generic Plotting function of objects of class biplot
prediction | Predict samples to display on the biplot
print.biplot | Generic print function for objects of class biplot
reflect | Reflect the biplot about a chosen axis
regress | Regression biplot method
regress.biplot | Regression biplot
rotate | Rotate the biplot a chosen amount of degrees
samples | Format aesthetics for the biplot samples
sqrtManhattan | Computes the square root of the Manhattan distance An example of a Euclidean embeddable distance metric
summary.biplot | Generic summary function for objects of class biplot
translate_axes | Translate biplot axes