Last updated on 2025-10-19 09:49:32 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.01 | 253.50 | 266.51 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.32 | 260.22 | 270.54 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.32 | 269.79 | 285.11 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.69 | 272.97 | 288.66 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 171.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 162.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.062, elapsed: 2.224 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.898, system: 0.137, elapsed: 10.805 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.015, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.201, elapsed: 4.245 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.013, system: 0.441, elapsed: 18.428 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.429, system: 0.035, elapsed: 1.595 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.120, system: 0.214, elapsed: 13.264 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.860, system: 0.251, elapsed: 5.877 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.007, elapsed: 0.192 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.296, system: 0.543, elapsed: 21.906 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.667, system: 0.076, elapsed: 2.368 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.235, system: 0.259, elapsed: 14.043 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.016, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.809, system: 0.233, elapsed: 8.876 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.008, elapsed: 0.342 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.157, system: 0.222, elapsed: 1.114 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.847, system: 0.844, elapsed: 28.177 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.063, elapsed: 2.359 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.177, system: 0.221, elapsed: 12.979 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.017, elapsed: 0.371 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.906, system: 0.309, elapsed: 6.729 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.010, elapsed: 0.288 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.548, system: 0.694, elapsed: 19.068 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.218, system: 1.350, elapsed: 42.819 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/104s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.054, elapsed: 1.766 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.953, system: 0.149, elapsed: 10.797 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.015, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.273, elapsed: 5.540 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.009, elapsed: 0.205 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.125, system: 0.526, elapsed: 19.289 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.061, elapsed: 1.806 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.067, system: 0.264, elapsed: 11.779 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.016, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.761, system: 0.241, elapsed: 5.607 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.009, elapsed: 0.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.341, system: 0.627, elapsed: 20.428 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.772, system: 0.080, elapsed: 2.615 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.179, system: 0.310, elapsed: 11.671 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.015, elapsed: 0.214 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.577, system: 0.248, elapsed: 4.173 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.020, elapsed: 0.207 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.035, system: 0.253, elapsed: 0.896 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.531, system: 0.968, elapsed: 20.631 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.572, system: 0.060, elapsed: 1.764 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.925, system: 0.162, elapsed: 12.985 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.487, system: 0.169, elapsed: 4.651 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.195 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.048, system: 0.483, elapsed: 15.946 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.004, system: 0.923, elapsed: 36.641 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64