| checkMacroCmdFile | checkMacroCmdFile |
| detectCores | detectCores |
| doProcCmd | doProcCmd |
| doProcessing | doProcessing |
| generateMetadata | generateMetadata |
| getBucketsDataset | getBucketsDataset |
| getBucketsTable | getBucketsTable |
| getClusters | getClusters |
| getMergedDataset | getMergedDataset |
| getSnrDataset | getSnrDataset |
| getSpectraData | getSnrDataset |
| ggplotClusters | ggplotClusters |
| ggplotCriterion | ggplotCriterion |
| ggplotLoadings | plotLoadings |
| ggplotPlotly | ggplotPlotly |
| ggplotScores | ggplotScores |
| plotClusters | plotClusters |
| plotCriterion | plotCriterion |
| plotLoadings | plotLoadings |
| plotScores | plotScores |
| plotSpecMat | plotSpecMat Overlaid/Stacked Plot |
| RWrapperCMD1D | RWrapperCMD1D |
| setLogFile | setLogFile |
| setPPMbounds | setPPMbounds |
| Spec1rDoProc | Spec1rDoProc |
| Spec1rProcpar | Spec1rProcpar |