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Contents of README:CAP3: A DNA sequence assembly program. CAP3 if the third generation of the CAP sequence assembly program. The program has a capability to clip 5' and 3' low-quality regions of reads. It uses base quality values in computation of overlaps between reads, construction of multiple sequence alignments of reads, and generation of consensus sequences. The program also uses forward-reverse constraints to correct assembly errors and link contigs. This just repackages the binaries provided from upstream. If you use CAP3 in any published work, please cite: Huang, X. and Madan, A. (1999) CAP3: A DNA sequence assembly program. Genome Res., 9, 868-877. *NOTE* The downloads are available here: https://faculty.sites.iastate.edu/xqhuang/cap3-assembly-program Sources are also hosted by the maintainer to ease automatic download. |
Name Last modified Size
Parent Directory - LICENSE 26-Nov-2013 10:57 369 README 06-Aug-2022 15:20 828 References 26-Nov-2013 10:57 147 cap3.SlackBuild 09-Apr-2022 10:50 2.9K cap3.info 06-Aug-2022 15:20 411 slack-desc 02-Jul-2016 02:48 1.0K
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